View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3382_low_9 (Length: 364)

Name: NF3382_low_9
Description: NF3382
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3382_low_9
NF3382_low_9
[»] chr3 (41 HSPs)
chr3 (16-348)||(34414751-34415083)
chr3 (254-335)||(51130759-51130840)
chr3 (249-335)||(32069153-32069239)
chr3 (245-306)||(34924547-34924608)
chr3 (254-305)||(9279336-9279387)
chr3 (254-305)||(27792881-27792932)
chr3 (251-297)||(25453877-25453923)
chr3 (254-332)||(30573897-30573975)
chr3 (249-335)||(37273138-37273224)
chr3 (249-306)||(2719472-2719529)
chr3 (252-305)||(26542544-26542597)
chr3 (254-331)||(43115065-43115142)
chr3 (254-306)||(13709832-13709884)
chr3 (264-340)||(24281066-24281142)
chr3 (270-306)||(48991876-48991912)
chr3 (264-335)||(27290881-27290952)
chr3 (252-299)||(37138297-37138344)
chr3 (252-303)||(51206510-51206561)
chr3 (255-297)||(482810-482852)
chr3 (270-340)||(11040589-11040659)
chr3 (255-305)||(13371127-13371177)
chr3 (252-306)||(16790387-16790441)
chr3 (249-335)||(21574494-21574580)
chr3 (278-312)||(40321072-40321106)
chr3 (254-340)||(40880923-40881009)
chr3 (252-297)||(2825154-2825199)
chr3 (254-299)||(21367676-21367721)
chr3 (249-306)||(23785259-23785316)
chr3 (259-300)||(23808079-23808120)
chr3 (265-306)||(54775147-54775188)
chr3 (269-305)||(5292530-5292566)
chr3 (257-297)||(24280723-24280763)
chr3 (254-306)||(24785214-24785266)
chr3 (254-306)||(28622008-28622060)
chr3 (278-306)||(33883759-33883787)
chr3 (259-299)||(34954096-34954136)
chr3 (254-306)||(35394507-35394559)
chr3 (254-306)||(40665438-40665490)
chr3 (264-332)||(47513672-47513740)
chr3 (254-306)||(53736129-53736181)
chr3 (254-306)||(54180789-54180841)
[»] chr7 (25 HSPs)
chr7 (249-306)||(6552301-6552358)
chr7 (249-335)||(7244684-7244770)
chr7 (197-306)||(26935566-26935675)
chr7 (270-335)||(46082061-46082126)
chr7 (254-306)||(27378837-27378889)
chr7 (254-306)||(24363610-24363662)
chr7 (279-330)||(6226141-6226192)
chr7 (251-306)||(7623144-7623199)
chr7 (249-300)||(9038116-9038167)
chr7 (249-304)||(25596037-25596092)
chr7 (249-305)||(39630598-39630655)
chr7 (251-299)||(12792579-12792627)
chr7 (254-302)||(44910613-44910661)
chr7 (251-306)||(3968766-3968821)
chr7 (281-340)||(30496741-30496800)
chr7 (264-335)||(33894646-33894717)
chr7 (254-332)||(9050644-9050721)
chr7 (253-306)||(8799856-8799909)
chr7 (254-331)||(9423578-9423655)
chr7 (249-306)||(36517583-36517640)
chr7 (254-340)||(44151451-44151541)
chr7 (254-299)||(48917362-48917407)
chr7 (254-306)||(529384-529436)
chr7 (254-302)||(45859539-45859587)
chr7 (278-306)||(47134766-47134794)
[»] chr4 (42 HSPs)
chr4 (259-305)||(53792585-53792631)
chr4 (254-300)||(1404426-1404472)
chr4 (255-305)||(44249295-44249345)
chr4 (244-306)||(53673667-53673729)
chr4 (254-306)||(7694019-7694071)
chr4 (249-305)||(35743286-35743342)
chr4 (254-305)||(35064864-35064915)
chr4 (255-334)||(45927359-45927438)
chr4 (254-340)||(2996582-2996668)
chr4 (249-331)||(28300283-28300365)
chr4 (221-299)||(50400463-50400541)
chr4 (254-299)||(28423539-28423584)
chr4 (221-298)||(47800599-47800676)
chr4 (249-306)||(47970300-47970357)
chr4 (251-304)||(51630117-51630170)
chr4 (254-306)||(11802543-11802595)
chr4 (254-306)||(17884077-17884129)
chr4 (272-340)||(33534144-33534212)
chr4 (254-306)||(47145971-47146023)
chr4 (254-306)||(49219148-49219200)
chr4 (254-317)||(34398683-34398746)
chr4 (249-332)||(46110207-46110290)
chr4 (251-306)||(54325046-54325101)
chr4 (278-332)||(4691881-4691935)
chr4 (264-306)||(5131259-5131301)
chr4 (249-303)||(18628555-18628609)
chr4 (254-304)||(46859939-46859989)
chr4 (255-332)||(1137722-1137799)
chr4 (278-335)||(3176084-3176141)
chr4 (249-298)||(6853229-6853278)
chr4 (249-298)||(18011875-18011924)
chr4 (254-331)||(46415776-46415853)
chr4 (253-305)||(6364157-6364209)
chr4 (273-305)||(6978972-6979004)
chr4 (254-302)||(22666498-22666546)
chr4 (278-306)||(25332808-25332836)
chr4 (254-306)||(25548137-25548189)
chr4 (254-306)||(29263379-29263431)
chr4 (258-306)||(29467633-29467681)
chr4 (254-306)||(30338600-30338652)
chr4 (270-306)||(39438547-39438583)
chr4 (265-297)||(51210473-51210505)
[»] chr8 (32 HSPs)
chr8 (254-335)||(11569437-11569518)
chr8 (253-306)||(25869275-25869328)
chr8 (252-306)||(42215091-42215145)
chr8 (254-306)||(28769348-28769400)
chr8 (254-306)||(30277254-30277306)
chr8 (249-332)||(779044-779127)
chr8 (249-306)||(11494150-11494207)
chr8 (249-306)||(20672754-20672811)
chr8 (254-306)||(9956823-9956875)
chr8 (254-306)||(27028840-27028892)
chr8 (251-306)||(33714245-33714300)
chr8 (251-306)||(42215315-42215370)
chr8 (254-304)||(1470867-1470917)
chr8 (273-335)||(6950350-6950412)
chr8 (264-306)||(8066849-8066891)
chr8 (254-332)||(27754413-27754491)
chr8 (249-331)||(35220707-35220789)
chr8 (257-299)||(42370377-42370419)
chr8 (254-304)||(44236834-44236884)
chr8 (273-306)||(8066779-8066812)
chr8 (254-307)||(31705094-31705147)
chr8 (254-307)||(31862502-31862555)
chr8 (270-306)||(4281571-4281607)
chr8 (254-306)||(8062338-8062390)
chr8 (251-335)||(9540976-9541060)
chr8 (272-340)||(9700028-9700096)
chr8 (255-299)||(11795102-11795146)
chr8 (255-303)||(13000436-13000484)
chr8 (278-306)||(30389132-30389160)
chr8 (270-306)||(30918138-30918174)
chr8 (249-297)||(36643911-36643959)
chr8 (254-298)||(39881769-39881813)
[»] chr2 (35 HSPs)
chr2 (254-306)||(35379025-35379077)
chr2 (251-305)||(41817174-41817228)
chr2 (255-335)||(11488287-11488365)
chr2 (251-306)||(44443327-44443382)
chr2 (254-335)||(43065430-43065511)
chr2 (254-306)||(7103491-7103543)
chr2 (254-306)||(15977994-15978046)
chr2 (245-305)||(27288631-27288691)
chr2 (249-297)||(33319830-33319878)
chr2 (231-302)||(32364744-32364815)
chr2 (254-317)||(43141880-43141943)
chr2 (259-306)||(44458347-44458394)
chr2 (264-306)||(7928308-7928350)
chr2 (249-303)||(8187465-8187519)
chr2 (252-306)||(9530737-9530791)
chr2 (254-332)||(33941918-33941996)
chr2 (254-312)||(36415676-36415734)
chr2 (251-317)||(42420003-42420069)
chr2 (278-332)||(44606093-44606147)
chr2 (259-332)||(1647250-1647323)
chr2 (249-298)||(3067396-3067445)
chr2 (249-306)||(10567061-10567118)
chr2 (258-331)||(12313157-12313230)
chr2 (254-335)||(15120192-15120273)
chr2 (254-299)||(27699545-27699590)
chr2 (255-332)||(33192212-33192289)
chr2 (278-306)||(1493522-1493550)
chr2 (254-306)||(3227692-3227744)
chr2 (254-306)||(3235393-3235445)
chr2 (254-306)||(16867748-16867800)
chr2 (254-306)||(19333334-19333386)
chr2 (254-298)||(24097817-24097861)
chr2 (258-306)||(35993389-35993437)
chr2 (254-306)||(38078419-38078471)
chr2 (273-305)||(41032965-41032997)
[»] chr1 (56 HSPs)
chr1 (251-335)||(10439692-10439776)
chr1 (251-306)||(14629975-14630030)
chr1 (249-302)||(4700079-4700132)
chr1 (254-306)||(12477296-12477348)
chr1 (254-306)||(27140487-27140539)
chr1 (254-306)||(45975699-45975751)
chr1 (251-306)||(6292499-6292554)
chr1 (254-337)||(25479590-25479673)
chr1 (256-335)||(26461921-26462000)
chr1 (255-302)||(35590905-35590952)
chr1 (264-306)||(15361059-15361101)
chr1 (258-332)||(35925703-35925777)
chr1 (254-304)||(45205077-45205127)
chr1 (259-317)||(47877123-47877181)
chr1 (249-306)||(6279403-6279460)
chr1 (249-306)||(11211122-11211179)
chr1 (252-332)||(4699598-4699678)
chr1 (254-306)||(7137007-7137059)
chr1 (254-306)||(10199417-10199469)
chr1 (219-303)||(15784303-15784387)
chr1 (254-306)||(27887127-27887179)
chr1 (249-305)||(34179882-34179938)
chr1 (254-306)||(34290245-34290297)
chr1 (254-306)||(37240851-37240903)
chr1 (254-306)||(39347976-39348028)
chr1 (249-297)||(41195211-41195259)
chr1 (258-306)||(46252691-46252739)
chr1 (254-306)||(51695504-51695556)
chr1 (254-298)||(52190138-52190182)
chr1 (251-306)||(2294917-2294972)
chr1 (255-306)||(11893602-11893653)
chr1 (254-305)||(12564509-12564560)
chr1 (259-306)||(28689461-28689508)
chr1 (254-332)||(3924633-3924711)
chr1 (256-306)||(31517749-31517799)
chr1 (264-306)||(38503474-38503516)
chr1 (251-305)||(43113117-43113171)
chr1 (264-297)||(601060-601093)
chr1 (265-306)||(4025104-4025145)
chr1 (254-299)||(5047155-5047200)
chr1 (270-323)||(6981517-6981570)
chr1 (258-299)||(7472324-7472365)
chr1 (257-306)||(16981945-16981994)
chr1 (259-296)||(24702254-24702291)
chr1 (254-311)||(35179148-35179205)
chr1 (256-305)||(35351050-35351099)
chr1 (254-311)||(42556635-42556692)
chr1 (254-306)||(489069-489121)
chr1 (254-306)||(6102163-6102215)
chr1 (273-317)||(16322877-16322921)
chr1 (254-306)||(26779934-26779986)
chr1 (254-306)||(27820346-27820398)
chr1 (254-306)||(27963379-27963431)
chr1 (254-306)||(30257692-30257744)
chr1 (253-297)||(43338124-43338168)
chr1 (254-306)||(47598430-47598482)
[»] chr5 (35 HSPs)
chr5 (254-304)||(10272442-10272492)
chr5 (254-306)||(7984978-7985030)
chr5 (254-306)||(17258892-17258944)
chr5 (254-340)||(37611190-37611276)
chr5 (254-340)||(37787920-37788006)
chr5 (249-306)||(7319017-7319074)
chr5 (252-305)||(10125728-10125781)
chr5 (254-306)||(2568667-2568719)
chr5 (254-306)||(4014433-4014485)
chr5 (270-317)||(1899179-1899226)
chr5 (254-305)||(7674657-7674708)
chr5 (254-305)||(11707064-11707115)
chr5 (269-340)||(37690611-37690682)
chr5 (264-306)||(8177541-8177583)
chr5 (254-304)||(8938655-8938705)
chr5 (254-340)||(12242685-12242771)
chr5 (254-332)||(17368685-17368763)
chr5 (256-306)||(28413293-28413343)
chr5 (254-304)||(36318783-36318833)
chr5 (270-340)||(37526174-37526244)
chr5 (255-305)||(38104867-38104917)
chr5 (249-306)||(1019475-1019532)
chr5 (254-335)||(2092525-2092606)
chr5 (254-335)||(13604829-13604910)
chr5 (255-304)||(36326021-36326070)
chr5 (271-303)||(499743-499775)
chr5 (276-304)||(4760675-4760703)
chr5 (270-306)||(7907906-7907942)
chr5 (267-299)||(8089303-8089335)
chr5 (202-306)||(11615458-11615562)
chr5 (254-302)||(18543210-18543257)
chr5 (258-306)||(19460580-19460628)
chr5 (254-306)||(33533548-33533600)
chr5 (254-306)||(36639531-36639583)
chr5 (254-306)||(41957460-41957512)
[»] chr6 (27 HSPs)
chr6 (256-306)||(34939755-34939805)
chr6 (254-299)||(1497990-1498035)
chr6 (253-306)||(17241261-17241314)
chr6 (254-306)||(3528812-3528864)
chr6 (270-330)||(27909623-27909683)
chr6 (252-335)||(2455817-2455900)
chr6 (252-335)||(4420650-4420733)
chr6 (273-335)||(9027606-9027668)
chr6 (255-305)||(20512654-20512704)
chr6 (221-300)||(24836217-24836300)
chr6 (294-340)||(33500455-33500501)
chr6 (254-299)||(835265-835310)
chr6 (265-306)||(5328993-5329034)
chr6 (264-297)||(12230380-12230413)
chr6 (252-305)||(29837095-29837147)
chr6 (278-335)||(31420978-31421035)
chr6 (254-299)||(33911298-33911343)
chr6 (285-317)||(3201945-3201977)
chr6 (254-306)||(4006723-4006775)
chr6 (254-306)||(6647396-6647448)
chr6 (264-304)||(13908482-13908522)
chr6 (251-295)||(24974436-24974480)
chr6 (254-298)||(26694887-26694931)
chr6 (249-301)||(28088236-28088288)
chr6 (287-335)||(30863288-30863336)
chr6 (254-302)||(31671087-31671135)
chr6 (254-306)||(34430470-34430522)
[»] scaffold0089 (1 HSPs)
scaffold0089 (255-305)||(33637-33687)
[»] scaffold0011 (1 HSPs)
scaffold0011 (252-301)||(14617-14666)
[»] scaffold0003 (1 HSPs)
scaffold0003 (254-339)||(306335-306420)
[»] scaffold0024 (1 HSPs)
scaffold0024 (221-289)||(21311-21379)


Alignment Details
Target: chr3 (Bit Score: 317; Significance: 1e-179; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 317; E-Value: 1e-179
Query Start/End: Original strand, 16 - 348
Target Start/End: Complemental strand, 34415083 - 34414751
Alignment:
Q  16 tcagcaaatgtccactcgagaagtgttgaagaagtatcacctcctccagcaaacatgtcctgaaattgtgaaaatggaaattctttatgctcttgtttta 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34415083 tcagcaaatgtccactcgagaagtgttgaagaagtatcacctcctccagcaaacatgtcctgaaattgtgaaaatggaaattctttatgctcttgtttta 34414984  T
Q  116 agttgggcatgcccgactatgtctagtttgaataaacactcatttcagtgtttatcgcataaacacttatcacatttatgcgtaaactatttttatgaca 215  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  34414983 agttgggcgtgcgcgactatgtctagtttgaataaacactcatttcagtgtttatcgcataaacgcttatcacatttatgcgtaaactatttttatgaca 34414884  T
Q  216 agtggtaaaattaagttaaattgtttccgtatgaactattttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatgcgcatgaca 315  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34414883 agtggtaaaattaagttaaattgtttccgtacgaactattttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatgcgcatgaca 34414784  T
Q  316 tagattgttttcataagctcactcagtcacaca 348  Q
    |||||||||||||||||||||||||||||||||    
T  34414783 tagattgttttcataagctcactcagtcacaca 34414751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 254 - 335
Target Start/End: Original strand, 51130759 - 51130840
Alignment:
Q  254 ttttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatgcgcatgacatagattgttttcataagctc 335  Q
    ||||||||| ||||||||||||| |  |||||||||||||||| |||||||||  |||| |||| || ||||||||||||||    
T  51130759 ttttcataagctatcatggagagctattgaaaataagctgaaagcaacttatggacatgtcatacatggttttcataagctc 51130840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 249 - 335
Target Start/End: Original strand, 32069153 - 32069239
Alignment:
Q  249 aactattttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatgcgcatgacatagattgttttcataagctc 335  Q
    |||| |||| |||| ||||| ||||||| ||||||||||||||| |||| |||||||| ||| |||||| ||||||| || ||||||    
T  32069153 aactgttttaataagctatcttggagagattatgaaaataagctaaaaagaacttatgggcacgacataaattgtttccagaagctc 32069239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 245 - 306
Target Start/End: Complemental strand, 34924608 - 34924547
Alignment:
Q  245 tatgaactattttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatg 306  Q
    ||||| |||||||||||| ||||| | ||||| |||||||||||||||||||||||| ||||    
T  34924608 tatgagctattttcataagctatcttagagagcttatgaaaataagctgaaaacaacatatg 34924547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 254 - 305
Target Start/End: Complemental strand, 9279387 - 9279336
Alignment:
Q  254 ttttcataaactatcatggagagtttatgaaaataagctgaaaacaacttat 305  Q
    |||||||||||||||||| |||||||| | |||||||||||||||| |||||    
T  9279387 ttttcataaactatcatgaagagtttaaggaaataagctgaaaacagcttat 9279336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 254 - 305
Target Start/End: Original strand, 27792881 - 27792932
Alignment:
Q  254 ttttcataaactatcatggagagtttatgaaaataagctgaaaacaacttat 305  Q
    |||||||||||||||||| |||| ||||  ||||||||||||||||||||||    
T  27792881 ttttcataaactatcatgtagagcttatagaaataagctgaaaacaacttat 27792932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 297
Target Start/End: Complemental strand, 25453923 - 25453877
Alignment:
Q  251 ctattttcataaactatcatggagagtttatgaaaataagctgaaaa 297  Q
    |||||||||||||||||| |||| || ||||||||||||||||||||    
T  25453923 ctattttcataaactatcctggaaagcttatgaaaataagctgaaaa 25453877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 254 - 332
Target Start/End: Complemental strand, 30573975 - 30573897
Alignment:
Q  254 ttttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatgcgcatgacatagattgttttcataag 332  Q
    ||||||||| ||||| ||||||| | ||||| |||||||||||||| ||||||  |||| ||||  |||||||||||||    
T  30573975 ttttcataagctatcttggagagctgatgaacataagctgaaaacagcttatgaacatgccataatttgttttcataag 30573897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 249 - 335
Target Start/End: Original strand, 37273138 - 37273224
Alignment:
Q  249 aactattttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatgcgcatgacatagattgttttcataagctc 335  Q
    |||| ||||||||| ||||| ||||||  ||||| ||||||| |||||||||||||||  |||| ||||  |||||| |||||||||    
T  37273138 aactgttttcataagctatcttggagaacttatggaaataagttgaaaacaacttatggacatgtcataagttgtttccataagctc 37273224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 249 - 306
Target Start/End: Original strand, 2719472 - 2719529
Alignment:
Q  249 aactattttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatg 306  Q
    |||| ||||||||| ||||| ||||||  ||||||||||||||||| |||||||||||    
T  2719472 aactgttttcataagctatcttggagaacttatgaaaataagctgagaacaacttatg 2719529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 252 - 305
Target Start/End: Original strand, 26542544 - 26542597
Alignment:
Q  252 tattttcataaactatcatggagagtttatgaaaataagctgaaaacaacttat 305  Q
    ||||||||||| |||| |||||||||||||| ||||||| ||||||||| ||||    
T  26542544 tattttcataagctattatggagagtttatggaaataagttgaaaacaagttat 26542597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 254 - 331
Target Start/End: Original strand, 43115065 - 43115142
Alignment:
Q  254 ttttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatgcgcatgacatagattgttttcataa 331  Q
    ||||||| ||||||||| ||||| ||||| ||||||||||||||||| |||||  |||| ||||  |||||| |||||    
T  43115065 ttttcatgaactatcattgagagcttatggaaataagctgaaaacaagttatggacatgtcataagttgtttccataa 43115142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 306
Target Start/End: Complemental strand, 13709884 - 13709832
Alignment:
Q  254 ttttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatg 306  Q
    ||||||||| ||||| ||||||||||||  |||||| ||||||||||||||||    
T  13709884 ttttcataagctatcctggagagtttattgaaataaactgaaaacaacttatg 13709832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 264 - 340
Target Start/End: Original strand, 24281066 - 24281142
Alignment:
Q  264 ctatcatggagagtttatgaaaataagctgaaaacaacttatgcgcatgacatagattgttttcataagctcactca 340  Q
    ||||||||||||| |||||||| |||| |||||||||||||||   ||  ||||  |||||||||||||||| ||||    
T  24281066 ctatcatggagagcttatgaaagtaagttgaaaacaacttatggagatatcataagttgttttcataagctctctca 24281142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 306
Target Start/End: Original strand, 48991876 - 48991912
Alignment:
Q  270 tggagagtttatgaaaataagctgaaaacaacttatg 306  Q
    ||||||| |||||||||||||||||||||||||||||    
T  48991876 tggagagattatgaaaataagctgaaaacaacttatg 48991912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 264 - 335
Target Start/End: Complemental strand, 27290952 - 27290881
Alignment:
Q  264 ctatcatggagagtttatgaaaataagctgaaaacaacttatgcgcatgacatagattgttttcataagctc 335  Q
    ||||| || |||||| ||| |||||||||||||||| |||||| ||||| ||||   |||||||||||||||    
T  27290952 ctatcctgcagagttcatggaaataagctgaaaacagcttatgggcatgtcataagctgttttcataagctc 27290881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 252 - 299
Target Start/End: Original strand, 37138297 - 37138344
Alignment:
Q  252 tattttcataaactatcatggagagtttatgaaaataagctgaaaaca 299  Q
    ||||||||||| ||||| | ||||||||| ||||||||||||||||||    
T  37138297 tattttcataagctatcttagagagtttaggaaaataagctgaaaaca 37138344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 252 - 303
Target Start/End: Complemental strand, 51206561 - 51206510
Alignment:
Q  252 tattttcataaactatcatggagagtttatgaaaataagctgaaaacaactt 303  Q
    |||||||| ||  |||||| ||||| ||||||||||||||||||||||||||    
T  51206561 tattttcaaaagttatcattgagagcttatgaaaataagctgaaaacaactt 51206510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 255 - 297
Target Start/End: Complemental strand, 482852 - 482810
Alignment:
Q  255 tttcataaactatcatggagagtttatgaaaataagctgaaaa 297  Q
    |||||||||||||| || |||||||||| ||||||||||||||    
T  482852 tttcataaactatcttgaagagtttatggaaataagctgaaaa 482810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 270 - 340
Target Start/End: Complemental strand, 11040659 - 11040589
Alignment:
Q  270 tggagagtttatgaaaataagctgaaaacaacttatgcgcatgacatagattgttttcataagctcactca 340  Q
    ||||| |||||||||||||||| ||||||||||||||  |||| ||||   |||||||||| |||| ||||    
T  11040659 tggagtgtttatgaaaataagccgaaaacaacttatggacatgtcatactctgttttcatatgctctctca 11040589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 255 - 305
Target Start/End: Original strand, 13371127 - 13371177
Alignment:
Q  255 tttcataaactatcatggagagtttatgaaaataagctgaaaacaacttat 305  Q
    |||||||| |||| ||| |||| ||||| ||||||||||||||||||||||    
T  13371127 tttcataagctattatgaagagcttatggaaataagctgaaaacaacttat 13371177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 306
Target Start/End: Complemental strand, 16790441 - 16790387
Alignment:
Q  252 tattttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatg 306  Q
    ||||||||||| ||||| |||| || |||||||||||| ||||||||| ||||||    
T  16790441 tattttcataagctatcttggatagcttatgaaaataaactgaaaacagcttatg 16790387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 335
Target Start/End: Original strand, 21574494 - 21574580
Alignment:
Q  249 aactattttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatgcgcatgacatagattgttttcataagctc 335  Q
    |||| |||| |||| ||| ||||||||| ||||| ||||||||| ||| || ||||||  |||| ||||  ||||||||||||||||    
T  21574494 aactttttttataagctaacatggagagcttatggaaataagctaaaagcagcttatgaacatgtcataagttgttttcataagctc 21574580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 312
Target Start/End: Complemental strand, 40321106 - 40321072
Alignment:
Q  278 ttatgaaaataagctgaaaacaacttatgcgcatg 312  Q
    |||||||||||||||||||||||||||||| ||||    
T  40321106 ttatgaaaataagctgaaaacaacttatgcacatg 40321072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 254 - 340
Target Start/End: Complemental strand, 40881009 - 40880923
Alignment:
Q  254 ttttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatgcgcatgacatagattgttttcataagctcactca 340  Q
    ||||||||||||||| | ||||  |||| |||||||| | ||||||||||| |  |||| ||||  |||||||||||||||| ||||    
T  40881009 ttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctca 40880923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 297
Target Start/End: Original strand, 2825154 - 2825199
Alignment:
Q  252 tattttcataaactatcatggagagtttatgaaaataagctgaaaa 297  Q
    ||||||||||| ||||| ||||||| ||||||||||||||| ||||    
T  2825154 tattttcataagctatcttggagagcttatgaaaataagcttaaaa 2825199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 299
Target Start/End: Original strand, 21367676 - 21367721
Alignment:
Q  254 ttttcataaactatcatggagagtttatgaaaataagctgaaaaca 299  Q
    ||||||||| ||||| ||||||  ||||||||||||||||||||||    
T  21367676 ttttcataagctatcttggagaacttatgaaaataagctgaaaaca 21367721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 306
Target Start/End: Original strand, 23785259 - 23785316
Alignment:
Q  249 aactattttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatg 306  Q
    |||| |||||| || || |||||||||| ||||| ||| |||||||||||||||||||    
T  23785259 aactgttttcacaagctctcatggagagcttatggaaacaagctgaaaacaacttatg 23785316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 259 - 300
Target Start/End: Complemental strand, 23808120 - 23808079
Alignment:
Q  259 ataaactatcatggagagtttatgaaaataagctgaaaacaa 300  Q
    |||| ||||| ||||||||||||||||||||| |||||||||    
T  23808120 ataagctatcttggagagtttatgaaaataagatgaaaacaa 23808079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 306
Target Start/End: Original strand, 54775147 - 54775188
Alignment:
Q  265 tatcatggagagtttatgaaaataagctgaaaacaacttatg 306  Q
    |||||||||||||||||||||||||| ||||| || ||||||    
T  54775147 tatcatggagagtttatgaaaataagatgaaagcagcttatg 54775188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 269 - 305
Target Start/End: Complemental strand, 5292566 - 5292530
Alignment:
Q  269 atggagagtttatgaaaataagctgaaaacaacttat 305  Q
    |||||||| ||||| ||||||||||||||||||||||    
T  5292566 atggagagcttatggaaataagctgaaaacaacttat 5292530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 257 - 297
Target Start/End: Original strand, 24280723 - 24280763
Alignment:
Q  257 tcataaactatcatggagagtttatgaaaataagctgaaaa 297  Q
    |||||| ||||||||||||| ||||||||||||| ||||||    
T  24280723 tcataagctatcatggagagcttatgaaaataagttgaaaa 24280763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 306
Target Start/End: Original strand, 24785214 - 24785266
Alignment:
Q  254 ttttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatg 306  Q
    ||||||||| ||||| | ||||| ||||| ||||||||| |||||||||||||    
T  24785214 ttttcataagctatcctcgagagcttatgtaaataagctaaaaacaacttatg 24785266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 306
Target Start/End: Complemental strand, 28622060 - 28622008
Alignment:
Q  254 ttttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatg 306  Q
    ||||||||||||||| | ||||  |||||||||||| ||||||||| ||||||    
T  28622060 ttttcataaactatcttcgagaacttatgaaaataacctgaaaacagcttatg 28622008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 306
Target Start/End: Complemental strand, 33883787 - 33883759
Alignment:
Q  278 ttatgaaaataagctgaaaacaacttatg 306  Q
    |||||||||||||||||||||||||||||    
T  33883787 ttatgaaaataagctgaaaacaacttatg 33883759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 259 - 299
Target Start/End: Original strand, 34954096 - 34954136
Alignment:
Q  259 ataaactatcatggagagtttatgaaaataagctgaaaaca 299  Q
    |||| |||||||||| || ||||||||||||||||||||||    
T  34954096 ataacctatcatggatagcttatgaaaataagctgaaaaca 34954136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 306
Target Start/End: Complemental strand, 35394559 - 35394507
Alignment:
Q  254 ttttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatg 306  Q
    ||||||||| ||||| || ||| |||||||||||||| |||||||| ||||||    
T  35394559 ttttcataagctatcttgaagaatttatgaaaataagttgaaaacagcttatg 35394507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 306
Target Start/End: Original strand, 40665438 - 40665490
Alignment:
Q  254 ttttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatg 306  Q
    |||||||||  |||| ||||||| |||| ||||||||||||||||| ||||||    
T  40665438 ttttcataagttatcttggagagcttataaaaataagctgaaaacagcttatg 40665490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 264 - 332
Target Start/End: Original strand, 47513672 - 47513740
Alignment:
Q  264 ctatcatggagagtttatgaaaataagctgaaaacaacttatgcgcatgacatagattgttttcataag 332  Q
    ||||| ||||||| ||||||||||||  |||||||||||||||  | || ||||  |||||||||||||    
T  47513672 ctatcttggagagcttatgaaaataaattgaaaacaacttatgaacgtgtcataacttgttttcataag 47513740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 306
Target Start/End: Complemental strand, 53736181 - 53736129
Alignment:
Q  254 ttttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatg 306  Q
    ||||||||| ||||  || || ||||||||||||||||||||| |||||||||    
T  53736181 ttttcataacctatactgaagtgtttatgaaaataagctgaaagcaacttatg 53736129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 306
Target Start/End: Complemental strand, 54180841 - 54180789
Alignment:
Q  254 ttttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatg 306  Q
    ||||||||| |||| |||||||| ||||  ||||||||| |||||||||||||    
T  54180841 ttttcataagctattatggagagcttatataaataagctaaaaacaacttatg 54180789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 1e-19; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 249 - 306
Target Start/End: Complemental strand, 6552358 - 6552301
Alignment:
Q  249 aactattttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatg 306  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  6552358 aactattttcataaactatcatgcagagtttatgaaaataagctgaaaacagcttatg 6552301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 249 - 335
Target Start/End: Original strand, 7244684 - 7244770
Alignment:
Q  249 aactattttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatgcgcatgacatagattgttttcataagctc 335  Q
    |||| ||||||||| ||||  ||||||| ||||||||||||||||||||||||||||| ||||| |||| ||||||| ||| |||||    
T  7244684 aactgttttcataagctatattggagagcttatgaaaataagctgaaaacaacttatgagcatgtcataaattgtttccatcagctc 7244770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 197 - 306
Target Start/End: Complemental strand, 26935675 - 26935566
Alignment:
Q  197 gtaaactatttttatgacaagtggtaaaattaagttaaattgtttccgtatgaactattttcataaactatcatggagagtttatgaaaataagctgaaa 296  Q
    |||| |||||||||| |||| || |||||| | |||||||||||| | ||||| |||||||||||| ||||  |  |||| ||||| |||||||||||||    
T  26935675 gtaagctatttttataacaaatgataaaataaggttaaattgttttcatatgagctattttcataatctattctaaagagcttatggaaataagctgaaa 26935576  T
Q  297 acaacttatg 306  Q
    ||| ||||||    
T  26935575 acagcttatg 26935566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 270 - 335
Target Start/End: Original strand, 46082061 - 46082126
Alignment:
Q  270 tggagagtttatgaaaataagctgaaaacaacttatgcgcatgacatagattgttttcataagctc 335  Q
    ||||||| |||||||||||||||||||||||||||||  |||| ||||  ||||||||||||||||    
T  46082061 tggagagcttatgaaaataagctgaaaacaacttatggtcatgtcataagttgttttcataagctc 46082126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 254 - 306
Target Start/End: Complemental strand, 27378889 - 27378837
Alignment:
Q  254 ttttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatg 306  Q
    ||||||||||||||| ||||||| |||||||||||| ||||||||||||||||    
T  27378889 ttttcataaactatcctggagagcttatgaaaataaactgaaaacaacttatg 27378837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 254 - 306
Target Start/End: Complemental strand, 24363662 - 24363610
Alignment:
Q  254 ttttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatg 306  Q
    ||||||||| ||||| ||||||| ||||| |||||||||||||||||||||||    
T  24363662 ttttcataagctatcctggagaggttatggaaataagctgaaaacaacttatg 24363610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 279 - 330
Target Start/End: Complemental strand, 6226192 - 6226141
Alignment:
Q  279 tatgaaaataagctgaaaacaacttatgcgcatgacatagattgttttcata 330  Q
    |||||||||||||||||||||||||||| |||||||||   |||||||||||    
T  6226192 tatgaaaataagctgaaaacaacttatgagcatgacattagttgttttcata 6226141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 251 - 306
Target Start/End: Original strand, 7623144 - 7623199
Alignment:
Q  251 ctattttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatg 306  Q
    |||||||||||||||||| || |||||||| ||||||||||  |||||||||||||    
T  7623144 ctattttcataaactatcttgaagagtttacgaaaataagccaaaaacaacttatg 7623199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 300
Target Start/End: Original strand, 9038116 - 9038167
Alignment:
Q  249 aactattttcataaactatcatggagagtttatgaaaataagctgaaaacaa 300  Q
    |||| ||||||||||||||||||||||  || ||||||||||||||||||||    
T  9038116 aactgttttcataaactatcatggagaacttgtgaaaataagctgaaaacaa 9038167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 304
Target Start/End: Original strand, 25596037 - 25596092
Alignment:
Q  249 aactattttcataaactatcatggagagtttatgaaaataagctgaaaacaactta 304  Q
    |||| ||||||||| ||||| ||||||| ||||||||||||| |||||||||||||    
T  25596037 aactcttttcataagctatcttggagagcttatgaaaataagttgaaaacaactta 25596092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 249 - 305
Target Start/End: Original strand, 39630598 - 39630655
Alignment:
Q  249 aactattttcataaactatcatggagagtttatgaaaataag-ctgaaaacaacttat 305  Q
    |||||||||| ||||||||| ||||||||||||  ||||||| |||||||||||||||    
T  39630598 aactattttcgtaaactatcttggagagtttattgaaataagcctgaaaacaacttat 39630655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 299
Target Start/End: Complemental strand, 12792627 - 12792579
Alignment:
Q  251 ctattttcataaactatcatggagagtttatgaaaataagctgaaaaca 299  Q
    |||||||||||| ||||| || |||| ||||||||||||||||||||||    
T  12792627 ctattttcataagctatcttgaagagcttatgaaaataagctgaaaaca 12792579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 302
Target Start/End: Original strand, 44910613 - 44910661
Alignment:
Q  254 ttttcataaactatcatggagagtttatgaaaataagctgaaaacaact 302  Q
    ||||||||||||||||||||||| || || |||||||| ||||||||||    
T  44910613 ttttcataaactatcatggagagcttgtggaaataagccgaaaacaact 44910661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 251 - 306
Target Start/End: Complemental strand, 3968821 - 3968766
Alignment:
Q  251 ctattttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatg 306  Q
    |||||||||||| ||||| ||||||||||||| ||||||  ||||| |||||||||    
T  3968821 ctattttcataagctatcctggagagtttatggaaataacatgaaatcaacttatg 3968766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 281 - 340
Target Start/End: Original strand, 30496741 - 30496800
Alignment:
Q  281 tgaaaataagctgaaaacaacttatgcgcatgacatagattgttttcataagctcactca 340  Q
    |||||||||||||||||||||||| | ||||| ||||   ||||||||||||||| ||||    
T  30496741 tgaaaataagctgaaaacaacttacgggcatgccataagctgttttcataagctctctca 30496800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 264 - 335
Target Start/End: Original strand, 33894646 - 33894717
Alignment:
Q  264 ctatcatggagagtttatgaaaataagctgaaaacaacttatgcgcatgacatagattgttttcataagctc 335  Q
    ||||| |||| |||||||  |||||||||||||||||||||||  |||| ||||   |||||||||||||||    
T  33894646 ctatcctggaaagtttattgaaataagctgaaaacaacttatggacatgtcatatgctgttttcataagctc 33894717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 254 - 332
Target Start/End: Original strand, 9050644 - 9050721
Alignment:
Q  254 ttttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatgcgcatgacatagattgttttcataag 332  Q
    ||||||||||||||| ||||||  || ||||||||||||||||| || |||||  |||||||||   ||||||||||||    
T  9050644 ttttcataaactatcttggagaacttgtgaaaataagctgaaaa-aaattatgaacatgacatatgctgttttcataag 9050721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 253 - 306
Target Start/End: Original strand, 8799856 - 8799909
Alignment:
Q  253 attttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatg 306  Q
    ||||||||||  |||| || |||||||||||| ||||||||||||| |||||||    
T  8799856 attttcataagttatcctgcagagtttatgaatataagctgaaaaccacttatg 8799909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 331
Target Start/End: Complemental strand, 9423655 - 9423578
Alignment:
Q  254 ttttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatgcgcatgacatagattgttttcataa 331  Q
    |||| |||| ||||| ||||||| || |  |||||||||||||||||||||||  |||| |||| ||||||| |||||    
T  9423655 ttttaataagctatcctggagagcttcttgaaataagctgaaaacaacttatgaacatgtcataaattgtttccataa 9423578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 306
Target Start/End: Original strand, 36517583 - 36517640
Alignment:
Q  249 aactattttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatg 306  Q
    |||||||||||||| ||||| ||||||  |||||||||||| ||||||| | ||||||    
T  36517583 aactattttcataagctatcttggagaaattatgaaaataaactgaaaatagcttatg 36517640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 340
Target Start/End: Complemental strand, 44151541 - 44151451
Alignment:
Q  254 ttttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatgcgcatgacat----agattgttttcataagctcactca 340  Q
    ||||||||||||||| || | || ||||| |||||||||||||||| ||||||  |||| |||    | ||||||||||||||||| ||||    
T  44151541 ttttcataaactatcttgaaaagcttatggaaataagctgaaaacatcttatggacatgtcataaaaaaattgttttcataagctctctca 44151451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 299
Target Start/End: Complemental strand, 48917407 - 48917362
Alignment:
Q  254 ttttcataaactatcatggagagtttatgaaaataagctgaaaaca 299  Q
    ||||||||| ||||| ||||||| |||||||||||||||| |||||    
T  48917407 ttttcataagctatcttggagagcttatgaaaataagctggaaaca 48917362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 306
Target Start/End: Original strand, 529384 - 529436
Alignment:
Q  254 ttttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatg 306  Q
    ||||||||| ||||| ||||||| ||||||||||| | |||||||| ||||||    
T  529384 ttttcataagctatcttggagagcttatgaaaatatgttgaaaacagcttatg 529436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 302
Target Start/End: Complemental strand, 45859587 - 45859539
Alignment:
Q  254 ttttcataaactatcatggagagtttatgaaaataagctgaaaacaact 302  Q
    |||||||| ||||||||| |||| ||||  |||||||||||||||||||    
T  45859587 ttttcatagactatcatgaagagcttatagaaataagctgaaaacaact 45859539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 306
Target Start/End: Complemental strand, 47134794 - 47134766
Alignment:
Q  278 ttatgaaaataagctgaaaacaacttatg 306  Q
    |||||||||||||||||||||||||||||    
T  47134794 ttatgaaaataagctgaaaacaacttatg 47134766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 259 - 305
Target Start/End: Original strand, 53792585 - 53792631
Alignment:
Q  259 ataaactatcatggagagtttatgaaaataagctgaaaacaacttat 305  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||    
T  53792585 ataaactatcttggagagtttatgaaaataagctgaaaacaacttat 53792631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 254 - 300
Target Start/End: Original strand, 1404426 - 1404472
Alignment:
Q  254 ttttcataaactatcatggagagtttatgaaaataagctgaaaacaa 300  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||||    
T  1404426 ttttcataaactatcatggagagcttatgaaagtaagctgaaaacaa 1404472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 255 - 305
Target Start/End: Original strand, 44249295 - 44249345
Alignment:
Q  255 tttcataaactatcatggagagtttatgaaaataagctgaaaacaacttat 305  Q
    |||||||||||||| |||||||||||||||||||||||||| | |||||||    
T  44249295 tttcataaactatcttggagagtttatgaaaataagctgaagaaaacttat 44249345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 306
Target Start/End: Complemental strand, 53673729 - 53673667
Alignment:
Q  244 gtatgaactattttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatg 306  Q
    |||| |||| ||||||||| ||||| ||||||| ||||| |||||||||||||||||||||||    
T  53673729 gtataaactgttttcataagctatcttggagagcttatgtaaataagctgaaaacaacttatg 53673667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 254 - 306
Target Start/End: Complemental strand, 7694071 - 7694019
Alignment:
Q  254 ttttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatg 306  Q
    |||||||||  |||| ||||||||||||| |||||||||||||||||||||||    
T  7694071 ttttcataagttatcctggagagtttatggaaataagctgaaaacaacttatg 7694019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 249 - 305
Target Start/End: Original strand, 35743286 - 35743342
Alignment:
Q  249 aactattttcataaactatcatggagagtttatgaaaataagctgaaaacaacttat 305  Q
    ||||| ||||||||||||||||| |||||||||| ||||||| || |||||||||||    
T  35743286 aactactttcataaactatcatgaagagtttatggaaataagttggaaacaacttat 35743342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 254 - 305
Target Start/End: Original strand, 35064864 - 35064915
Alignment:
Q  254 ttttcataaactatcatggagagtttatgaaaataagctgaaaacaacttat 305  Q
    |||||||||  |||||||||||||||||| ||||||||||||||||| ||||    
T  35064864 ttttcataagatatcatggagagtttatggaaataagctgaaaacaatttat 35064915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 255 - 334
Target Start/End: Original strand, 45927359 - 45927438
Alignment:
Q  255 tttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatgcgcatgacatagattgttttcataagct 334  Q
    ||||| || |||| |||||||||||||| |||||||||||||||| |||||||| ||| |||  ||||||| || |||||    
T  45927359 tttcagaagctattatggagagtttatggaaataagctgaaaacagcttatgcgtatgtcatgaattgtttccacaagct 45927438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 254 - 340
Target Start/End: Original strand, 2996582 - 2996668
Alignment:
Q  254 ttttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatgcgcatgacatagattgttttcataagctcactca 340  Q
    ||||||||| ||||| |||||||  |||||||||||| |||||| | ||||||  |||| ||||  |||||||||||||||| ||||    
T  2996582 ttttcataagctatcttggagagcgtatgaaaataagttgaaaaaagcttatggacatgtcataagttgttttcataagctctctca 2996668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 249 - 331
Target Start/End: Complemental strand, 28300365 - 28300283
Alignment:
Q  249 aactattttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatgcgcatgacatagattgttttcataa 331  Q
    |||||||||||||  ||||| || |||| ||||||||||||| ||||||||||||| |  |||| |||||  |||||||||||    
T  28300365 aactattttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcataggctgttttcataa 28300283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 299
Target Start/End: Original strand, 50400463 - 50400541
Alignment:
Q  221 taaaattaagttaaattgtttccgtatgaactattttcataaactatcatggagagtttatgaaaataagctgaaaaca 299  Q
    |||||| |||| ||||||| | ||||| |  | |||||||||||||||||| | | |||||||||||||||||||||||    
T  50400463 taaaataaagtcaaattgtgttcgtataagttgttttcataaactatcatgaaaactttatgaaaataagctgaaaaca 50400541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 254 - 299
Target Start/End: Original strand, 28423539 - 28423584
Alignment:
Q  254 ttttcataaactatcatggagagtttatgaaaataagctgaaaaca 299  Q
    ||||| ||| |||||||| |||||||||||||||||||||||||||    
T  28423539 ttttcctaagctatcatgtagagtttatgaaaataagctgaaaaca 28423584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 221 - 298
Target Start/End: Original strand, 47800599 - 47800676
Alignment:
Q  221 taaaattaagttaaattgtttccgtatgaactattttcataaactatcatggagagtttatgaaaataagctgaaaac 298  Q
    |||||| |||||||| |||||  |||| | || ||||||||| ||||| || |||| |||||||||||||||||||||    
T  47800599 taaaataaagttaaaatgtttttgtataagctgttttcataagctatcttgaagagcttatgaaaataagctgaaaac 47800676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 249 - 306
Target Start/End: Original strand, 47970300 - 47970357
Alignment:
Q  249 aactattttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatg 306  Q
    ||||||||||| |  ||||||||||||| ||||| ||||||||||||||||| |||||    
T  47970300 aactattttcaaattctatcatggagagcttatgcaaataagctgaaaacaatttatg 47970357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 251 - 304
Target Start/End: Original strand, 51630117 - 51630170
Alignment:
Q  251 ctattttcataaactatcatggagagtttatgaaaataagctgaaaacaactta 304  Q
    |||||||||||| ||||| || ||| ||||||||||||||||||||||| ||||    
T  51630117 ctattttcataagctatcttgaagaatttatgaaaataagctgaaaacatctta 51630170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 306
Target Start/End: Original strand, 11802543 - 11802595
Alignment:
Q  254 ttttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatg 306  Q
    ||||||||| |||| |||||||| |||||| ||||||||||||||| ||||||    
T  11802543 ttttcataagctattatggagagcttatgagaataagctgaaaacagcttatg 11802595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 306
Target Start/End: Original strand, 17884077 - 17884129
Alignment:
Q  254 ttttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatg 306  Q
    ||||||||| ||||  ||||||| |||||||||| ||||||||||||||||||    
T  17884077 ttttcataagctatattggagagcttatgaaaattagctgaaaacaacttatg 17884129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 272 - 340
Target Start/End: Complemental strand, 33534212 - 33534144
Alignment:
Q  272 gagagtttatgaaaataagctgaaaacaacttatgcgcatgacatagattgttttcataagctcactca 340  Q
    ||||| |||||||||||||||||||||||||||||   ||| || |  |||||||||||||||| ||||    
T  33534212 gagagcttatgaaaataagctgaaaacaacttatggatatgtcacaatttgttttcataagctctctca 33534144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 306
Target Start/End: Original strand, 47145971 - 47146023
Alignment:
Q  254 ttttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatg 306  Q
    |||||||||||| || || |||| ||||||||||||| |||||||||||||||    
T  47145971 ttttcataaactgtcttgaagagcttatgaaaataaggtgaaaacaacttatg 47146023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 306
Target Start/End: Original strand, 49219148 - 49219200
Alignment:
Q  254 ttttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatg 306  Q
    ||||||||||||||| |  |||| ||||| |||||||||||||||||||||||    
T  49219148 ttttcataaactatcttaaagagattatggaaataagctgaaaacaacttatg 49219200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 254 - 317
Target Start/End: Complemental strand, 34398746 - 34398683
Alignment:
Q  254 ttttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatgcgcatgacata 317  Q
    ||||||||| | ||||||||||| ||||| || ||||| |||||||||||||| ||||| ||||    
T  34398746 ttttcataagccatcatggagagcttatggaagtaagccgaaaacaacttatgggcatgtcata 34398683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 249 - 332
Target Start/End: Original strand, 46110207 - 46110290
Alignment:
Q  249 aactattttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatgcgcatgacatagattgttttcataag 332  Q
    |||| ||||||||| |||| || ||||| ||||  ||||||||||||||||||||||| | ||  ||||  |||||||||||||    
T  46110207 aactgttttcataagctatgattgagagcttatagaaataagctgaaaacaacttatgagtatatcataagttgttttcataag 46110290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 251 - 306
Target Start/End: Complemental strand, 54325101 - 54325046
Alignment:
Q  251 ctattttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatg 306  Q
    ||||||||| || ||||||||||||||||||| | |||| ||||||||| ||||||    
T  54325101 ctattttcaaaagctatcatggagagtttatggagataaactgaaaacagcttatg 54325046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 332
Target Start/End: Original strand, 4691881 - 4691935
Alignment:
Q  278 ttatgaaaataagctgaaaacaacttatgcgcatgacatagattgttttcataag 332  Q
    |||||||||||||||||||||||| |||| ||||| ||||  |||||| ||||||    
T  4691881 ttatgaaaataagctgaaaacaacatatgggcatgtcataagttgtttccataag 4691935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 264 - 306
Target Start/End: Complemental strand, 5131301 - 5131259
Alignment:
Q  264 ctatcatggagagtttatgaaaataagctgaaaacaacttatg 306  Q
    ||||| ||||||| ||||| |||||||||||||||||||||||    
T  5131301 ctatcctggagagcttatggaaataagctgaaaacaacttatg 5131259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 303
Target Start/End: Complemental strand, 18628609 - 18628555
Alignment:
Q  249 aactattttcataaactatcatggagagtttatgaaaataagctgaaaacaactt 303  Q
    |||| |||||||||  |||| ||||||| ||||| ||||||||||||||||||||    
T  18628609 aactgttttcataagttatcttggagagcttatggaaataagctgaaaacaactt 18628555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 254 - 304
Target Start/End: Original strand, 46859939 - 46859989
Alignment:
Q  254 ttttcataaactatcatggagagtttatgaaaataagctgaaaacaactta 304  Q
    |||| |||| ||||||||| |||||| ||||| ||||||||||||||||||    
T  46859939 tttttataacctatcatggggagtttttgaaagtaagctgaaaacaactta 46859989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 332
Target Start/End: Original strand, 1137722 - 1137799
Alignment:
Q  255 tttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatgcgcatgacatagattgttttcataag 332  Q
    ||||||||||||||   ||||| ||||| |||||| ||||||||||||||||  |||| ||||   ||||||||||||    
T  1137722 tttcataaactatccaagagagcttatggaaataaactgaaaacaacttatgaacatgtcataagatgttttcataag 1137799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 278 - 335
Target Start/End: Complemental strand, 3176141 - 3176084
Alignment:
Q  278 ttatgaaaataagctgaaaacaacttatgcgcatgacatagattgttttcataagctc 335  Q
    ||||| ||||||||||||||||||||||   |||||||||   |||||||||||||||    
T  3176141 ttatggaaataagctgaaaacaacttatagacatgacataagatgttttcataagctc 3176084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 298
Target Start/End: Original strand, 6853229 - 6853278
Alignment:
Q  249 aactattttcataaactatcatggagagtttatgaaaataagctgaaaac 298  Q
    |||||| ||||||| |||||||||||| || |||||||||| ||||||||    
T  6853229 aactatgttcataagctatcatggagacttcatgaaaataatctgaaaac 6853278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 298
Target Start/End: Original strand, 18011875 - 18011924
Alignment:
Q  249 aactattttcataaactatcatggagagtttatgaaaataagctgaaaac 298  Q
    |||| ||||||||| ||||| || |||||||||||||||||||| |||||    
T  18011875 aactgttttcataagctatcttgaagagtttatgaaaataagctaaaaac 18011924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 331
Target Start/End: Complemental strand, 46415853 - 46415776
Alignment:
Q  254 ttttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatgcgcatgacatagattgttttcataa 331  Q
    ||||||||| ||||| | ||||| |||  ||||| ||||||||||||||||||  |||| ||||| |||||| |||||    
T  46415853 ttttcataagctatcctcgagagcttagtaaaattagctgaaaacaacttatggacatgtcataggttgtttgcataa 46415776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 253 - 305
Target Start/End: Original strand, 6364157 - 6364209
Alignment:
Q  253 attttcataaactatcatggagagtttatgaaaataagctgaaaacaacttat 305  Q
    |||||||||| |||| |||||||  ||| |||||||||||||||||| |||||    
T  6364157 attttcataagctataatggagaacttacgaaaataagctgaaaacagcttat 6364209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 305
Target Start/End: Complemental strand, 6979004 - 6978972
Alignment:
Q  273 agagtttatgaaaataagctgaaaacaacttat 305  Q
    ||||||||||||||||||||||||||| |||||    
T  6979004 agagtttatgaaaataagctgaaaacagcttat 6978972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 302
Target Start/End: Original strand, 22666498 - 22666546
Alignment:
Q  254 ttttcataaactatcatggagagtttatgaaaataagctgaaaacaact 302  Q
    ||||||||| ||||||||||||  |||||| ||||||| ||||||||||    
T  22666498 ttttcataagctatcatggagaacttatgacaataagcagaaaacaact 22666546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 306
Target Start/End: Original strand, 25332808 - 25332836
Alignment:
Q  278 ttatgaaaataagctgaaaacaacttatg 306  Q
    |||||||||||||||||||||||||||||    
T  25332808 ttatgaaaataagctgaaaacaacttatg 25332836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 306
Target Start/End: Complemental strand, 25548189 - 25548137
Alignment:
Q  254 ttttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatg 306  Q
    ||||||||||||||   | |||| ||||||||||||| |||||||||||||||    
T  25548189 ttttcataaactatacagcagagcttatgaaaataagttgaaaacaacttatg 25548137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 306
Target Start/End: Original strand, 29263379 - 29263431
Alignment:
Q  254 ttttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatg 306  Q
    ||||||||| ||||| || |||| || || |||||||||||||||||||||||    
T  29263379 ttttcataagctatcctgcagagcttgtggaaataagctgaaaacaacttatg 29263431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 258 - 306
Target Start/End: Complemental strand, 29467681 - 29467633
Alignment:
Q  258 cataaactatcatggagagtttatgaaaataagctgaaaacaacttatg 306  Q
    |||| |||||| | ||||||||||| |||||||||||||||| ||||||    
T  29467681 catacactatcctagagagtttatggaaataagctgaaaacagcttatg 29467633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 306
Target Start/End: Complemental strand, 30338652 - 30338600
Alignment:
Q  254 ttttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatg 306  Q
    ||||||||| || || ||||||||||||||||||||||  |||||| ||||||    
T  30338652 ttttcataagctctcttggagagtttatgaaaataagcataaaacagcttatg 30338600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 270 - 306
Target Start/End: Complemental strand, 39438583 - 39438547
Alignment:
Q  270 tggagagtttatgaaaataagctgaaaacaacttatg 306  Q
    ||||||||| ||||||||||| |||||||||||||||    
T  39438583 tggagagttaatgaaaataagttgaaaacaacttatg 39438547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 265 - 297
Target Start/End: Complemental strand, 51210505 - 51210473
Alignment:
Q  265 tatcatggagagtttatgaaaataagctgaaaa 297  Q
    |||| ||||||||||||||||||||||||||||    
T  51210505 tatcttggagagtttatgaaaataagctgaaaa 51210473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 254 - 335
Target Start/End: Complemental strand, 11569518 - 11569437
Alignment:
Q  254 ttttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatgcgcatgacatagattgttttcataagctc 335  Q
    ||||||||| ||||||||||||| || ||||||||||||||||||||||||||  |||| ||||   ||||| |||||||||    
T  11569518 ttttcataagctatcatggagagattttgaaaataagctgaaaacaacttatgtacatgtcataagctgtttccataagctc 11569437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 253 - 306
Target Start/End: Complemental strand, 25869328 - 25869275
Alignment:
Q  253 attttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatg 306  Q
    |||||||||  ||||||||||||||||||| |||||||||||||||||||||||    
T  25869328 attttcataggctatcatggagagtttatggaaataagctgaaaacaacttatg 25869275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 252 - 306
Target Start/End: Complemental strand, 42215145 - 42215091
Alignment:
Q  252 tattttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatg 306  Q
    ||||||||||| ||||| ||||||| ||||| |||||||||||||||||||||||    
T  42215145 tattttcataagctatcttggagagcttatgtaaataagctgaaaacaacttatg 42215091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 254 - 306
Target Start/End: Complemental strand, 28769400 - 28769348
Alignment:
Q  254 ttttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatg 306  Q
    ||||||||| ||||  ||||||||||||| |||||||||||||||||||||||    
T  28769400 ttttcataagctattttggagagtttatggaaataagctgaaaacaacttatg 28769348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 254 - 306
Target Start/End: Complemental strand, 30277306 - 30277254
Alignment:
Q  254 ttttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatg 306  Q
    ||||||||| ||||| | ||||||||||| |||||||||||||||||||||||    
T  30277306 ttttcataagctatcctagagagtttatggaaataagctgaaaacaacttatg 30277254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 332
Target Start/End: Complemental strand, 779127 - 779044
Alignment:
Q  249 aactattttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatgcgcatgacatagattgttttcataag 332  Q
    |||| ||||||||||||||| |||||||| ||  |||||||| |||||||||||||||  |||| ||||  |||||||| ||||    
T  779127 aactgttttcataaactatcttggagagtgtaccaaaataagatgaaaacaacttatgaacatgtcataagttgttttcgtaag 779044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 249 - 306
Target Start/End: Original strand, 11494150 - 11494207
Alignment:
Q  249 aactattttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatg 306  Q
    |||||||||||||| ||||| || |||| ||||||||||||||||||| || ||||||    
T  11494150 aactattttcataagctatcttgaagagcttatgaaaataagctgaaagcagcttatg 11494207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 249 - 306
Target Start/End: Original strand, 20672754 - 20672811
Alignment:
Q  249 aactattttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatg 306  Q
    |||| |||| |||| ||||| ||||||| |||||||||||||||||||||| ||||||    
T  20672754 aactgtttttataagctatcctggagagcttatgaaaataagctgaaaacagcttatg 20672811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 306
Target Start/End: Complemental strand, 9956875 - 9956823
Alignment:
Q  254 ttttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatg 306  Q
    ||||||||| ||||| ||||||  ||||||||||||||||||||| |||||||    
T  9956875 ttttcataatctatcttggagaacttatgaaaataagctgaaaactacttatg 9956823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 306
Target Start/End: Original strand, 27028840 - 27028892
Alignment:
Q  254 ttttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatg 306  Q
    ||||||||| ||||| ||||||| |||||||||||||||||||| | ||||||    
T  27028840 ttttcataagctatcttggagagcttatgaaaataagctgaaaatagcttatg 27028892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 251 - 306
Target Start/End: Complemental strand, 33714300 - 33714245
Alignment:
Q  251 ctattttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatg 306  Q
    |||||||||||| |||||  |||||| |||| ||||||||||||||||| ||||||    
T  33714300 ctattttcataagctatctgggagagcttataaaaataagctgaaaacagcttatg 33714245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 251 - 306
Target Start/End: Complemental strand, 42215370 - 42215315
Alignment:
Q  251 ctattttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatg 306  Q
    |||||||||||  ||||| ||||||| ||||| |||||||||||||||| ||||||    
T  42215370 ctattttcatatgctatcctggagagcttatgtaaataagctgaaaacagcttatg 42215315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 254 - 304
Target Start/End: Complemental strand, 1470917 - 1470867
Alignment:
Q  254 ttttcataaactatcatggagagtttatgaaaataagctgaaaacaactta 304  Q
    ||||||||| |||||||| | |||||| ||||||||| |||||||||||||    
T  1470917 ttttcataacctatcatgaaaagtttaggaaaataagatgaaaacaactta 1470867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 273 - 335
Target Start/End: Original strand, 6950350 - 6950412
Alignment:
Q  273 agagtttatgaaaataagctgaaaacaacttatgcgcatgacatagattgttttcataagctc 335  Q
    |||| ||||| ||||||||||||||||||||||   |||| ||||| |||||| |||||||||    
T  6950350 agagcttatggaaataagctgaaaacaacttatcgacatgtcataggttgtttacataagctc 6950412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 264 - 306
Target Start/End: Complemental strand, 8066891 - 8066849
Alignment:
Q  264 ctatcatggagagtttatgaaaataagctgaaaacaacttatg 306  Q
    ||||| || ||||||||| ||||||||||||||||||||||||    
T  8066891 ctatcttgtagagtttattaaaataagctgaaaacaacttatg 8066849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 254 - 332
Target Start/End: Original strand, 27754413 - 27754491
Alignment:
Q  254 ttttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatgcgcatgacatagattgttttcataag 332  Q
    ||||||||| ||||  ||||||| ||||||||||||||||||  ||||||||   |||| |||| | ||||||||||||    
T  27754413 ttttcataagctattttggagagcttatgaaaataagctgaacgcaacttataatcatgtcataaactgttttcataag 27754491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 331
Target Start/End: Complemental strand, 35220789 - 35220707
Alignment:
Q  249 aactattttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatgcgcatgacatagattgttttcataa 331  Q
    |||| ||||||||| ||||  ||||||| |||| |||||||||| |||| | |||||| ||||| |||| | |||||||||||    
T  35220789 aactgttttcataagctattctggagagcttataaaaataagctaaaaatagcttatgggcatgtcataaactgttttcataa 35220707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 299
Target Start/End: Complemental strand, 42370419 - 42370377
Alignment:
Q  257 tcataaactatcatggagagtttatgaaaataagctgaaaaca 299  Q
    |||||| |||||||| |||||||||| ||||||||||||||||    
T  42370419 tcataagctatcatgaagagtttatggaaataagctgaaaaca 42370377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 254 - 304
Target Start/End: Complemental strand, 44236884 - 44236834
Alignment:
Q  254 ttttcataaactatcatggagagtttatgaaaataagctgaaaacaactta 304  Q
    ||||||||| ||||  ||||||| |||||||||||||||||||| ||||||    
T  44236884 ttttcataagctatattggagagcttatgaaaataagctgaaaataactta 44236834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 306
Target Start/End: Complemental strand, 8066812 - 8066779
Alignment:
Q  273 agagtttatgaaaataagctgaaaacaacttatg 306  Q
    ||||||||||||||||||||||||| ||||||||    
T  8066812 agagtttatgaaaataagctgaaaaaaacttatg 8066779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 307
Target Start/End: Original strand, 31705094 - 31705147
Alignment:
Q  254 ttttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatgc 307  Q
    ||||||||| || || | ||||||||||| |||||||||||||||| |||||||    
T  31705094 ttttcataagctgtccttgagagtttatggaaataagctgaaaacagcttatgc 31705147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 307
Target Start/End: Original strand, 31862502 - 31862555
Alignment:
Q  254 ttttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatgc 307  Q
    |||||||||  |||| | ||||| |||||||||||||||||||||| |||||||    
T  31862502 ttttcataagttatcctagagagcttatgaaaataagctgaaaacagcttatgc 31862555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 270 - 306
Target Start/End: Original strand, 4281571 - 4281607
Alignment:
Q  270 tggagagtttatgaaaataagctgaaaacaacttatg 306  Q
    |||||| |||||||||||||| |||||||||||||||    
T  4281571 tggagaatttatgaaaataagatgaaaacaacttatg 4281607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 306
Target Start/End: Original strand, 8062338 - 8062390
Alignment:
Q  254 ttttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatg 306  Q
    ||||||||| ||||| | ||||| ||||| |||||||||||||||| ||||||    
T  8062338 ttttcataagctatcttagagagattatggaaataagctgaaaacatcttatg 8062390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 335
Target Start/End: Complemental strand, 9541060 - 9540976
Alignment:
Q  251 ctattttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatgcgcatgacatagattgttttcataagctc 335  Q
    |||||||||||| ||||| | ||||| || ||||||||||||||| |||| |||||  |||| ||||   ||||| |||||||||    
T  9541060 ctattttcataagctatcctagagagcttttgaaaataagctgaacacaaattatggacatgtcataagatgtttccataagctc 9540976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 340
Target Start/End: Original strand, 9700028 - 9700096
Alignment:
Q  272 gagagtttatgaaaataagctgaaaacaacttatgcgcatgacatagattgttttcataagctcactca 340  Q
    ||||| ||||||||||||| |||||||| ||||||  |||| |||| |||| ||||| |||||| ||||    
T  9700028 gagagcttatgaaaataaggtgaaaacagcttatggacatgtcataaattgatttcacaagctctctca 9700096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 299
Target Start/End: Original strand, 11795102 - 11795146
Alignment:
Q  255 tttcataaactatcatggagagtttatgaaaataagctgaaaaca 299  Q
    |||||||| |||| |||||||| ||||| ||||||||||||||||    
T  11795102 tttcataagctattatggagagcttatggaaataagctgaaaaca 11795146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 303
Target Start/End: Complemental strand, 13000484 - 13000436
Alignment:
Q  255 tttcataaactatcatggagagtttatgaaaataagctgaaaacaactt 303  Q
    ||||||||||| ||||| | || ||||| ||||||||||||||||||||    
T  13000484 tttcataaactgtcatgcaaagcttatggaaataagctgaaaacaactt 13000436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 306
Target Start/End: Original strand, 30389132 - 30389160
Alignment:
Q  278 ttatgaaaataagctgaaaacaacttatg 306  Q
    |||||||||||||||||||||||||||||    
T  30389132 ttatgaaaataagctgaaaacaacttatg 30389160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 270 - 306
Target Start/End: Original strand, 30918138 - 30918174
Alignment:
Q  270 tggagagtttatgaaaataagctgaaaacaacttatg 306  Q
    ||||||| ||||| |||||||||||||||||||||||    
T  30918138 tggagagcttatggaaataagctgaaaacaacttatg 30918174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 249 - 297
Target Start/End: Complemental strand, 36643959 - 36643911
Alignment:
Q  249 aactattttcataaactatcatggagagtttatgaaaataagctgaaaa 297  Q
    |||||||||||||| ||||||||||||   |||| ||||||||||||||    
T  36643959 aactattttcataagctatcatggagaacgtatggaaataagctgaaaa 36643911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 298
Target Start/End: Complemental strand, 39881813 - 39881769
Alignment:
Q  254 ttttcataaactatcatggagagtttatgaaaataagctgaaaac 298  Q
    |||| |||| ||||||||||||| ||||| |||||||||||||||    
T  39881813 tttttataagctatcatggagagcttatggaaataagctgaaaac 39881769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 254 - 306
Target Start/End: Complemental strand, 35379077 - 35379025
Alignment:
Q  254 ttttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatg 306  Q
    ||||||||| ||||| ||||||| |||||||||||||||||||||||||||||    
T  35379077 ttttcataagctatcttggagagcttatgaaaataagctgaaaacaacttatg 35379025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 251 - 305
Target Start/End: Original strand, 41817174 - 41817228
Alignment:
Q  251 ctattttcataaactatcatggagagtttatgaaaataagctgaaaacaacttat 305  Q
    |||||||||||||||||| ||||||| ||||| ||||||||||||||||| ||||    
T  41817174 ctattttcataaactatcctggagagcttatggaaataagctgaaaacaaattat 41817228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 255 - 335
Target Start/End: Original strand, 11488287 - 11488365
Alignment:
Q  255 tttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatgcgcatgacatagattgttttcataagctc 335  Q
    |||||||| ||||| ||||||| ||||| |||||||||||||||||||||||  |||  ||||  ||||||||||||||||    
T  11488287 tttcataagctatcctggagagattatgcaaataagctgaaaacaacttatgaccat--cataagttgttttcataagctc 11488365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 251 - 306
Target Start/End: Original strand, 44443327 - 44443382
Alignment:
Q  251 ctattttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatg 306  Q
    |||||||||||| ||||| | |||||  ||||||||||||||||||||||||||||    
T  44443327 ctattttcataagctatctttgagagcatatgaaaataagctgaaaacaacttatg 44443382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 254 - 335
Target Start/End: Complemental strand, 43065511 - 43065430
Alignment:
Q  254 ttttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatgcgcatgacatagattgttttcataagctc 335  Q
    |||||||||  |||| ||||||| ||||  ||||||||||||||||| |||||  |||| ||||  ||||||||||||||||    
T  43065511 ttttcataagttatcgtggagagcttattgaaataagctgaaaacaatttatggacatgtcataagttgttttcataagctc 43065430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 306
Target Start/End: Complemental strand, 7103543 - 7103491
Alignment:
Q  254 ttttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatg 306  Q
    ||||||||| ||||| | |||||||| |||||||||||| |||||||||||||    
T  7103543 ttttcataagctatcttagagagtttgtgaaaataagctaaaaacaacttatg 7103491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 306
Target Start/End: Original strand, 15977994 - 15978046
Alignment:
Q  254 ttttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatg 306  Q
    ||||||||| ||||  ||||||| ||||||||||||||||||||||| |||||    
T  15977994 ttttcataagctattttggagagattatgaaaataagctgaaaacaatttatg 15978046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 305
Target Start/End: Original strand, 27288631 - 27288691
Alignment:
Q  245 tatgaactattttcataaactatcatggagagtttatgaaaataagctgaaaacaacttat 305  Q
    ||||| || |||||||||  ||||||| |||||||| | ||||||||||||||||||||||    
T  27288631 tatgatctgttttcataagttatcatgtagagtttacggaaataagctgaaaacaacttat 27288691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 297
Target Start/End: Complemental strand, 33319878 - 33319830
Alignment:
Q  249 aactattttcataaactatcatggagagtttatgaaaataagctgaaaa 297  Q
    |||| ||||||||||||||| ||||||  ||||||||||||||||||||    
T  33319878 aactgttttcataaactatcttggagaacttatgaaaataagctgaaaa 33319830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 231 - 302
Target Start/End: Complemental strand, 32364815 - 32364744
Alignment:
Q  231 ttaaattgtttccgtatgaactattttcataaactatcatggagagtttatgaaaataagctgaaaacaact 302  Q
    ||||||||||| ||||| | || ||| | ||||||||| | ||||  |||||||||||||||||||||||||    
T  32364815 ttaaattgttttcgtataagctgtttacgtaaactatcttagagatcttatgaaaataagctgaaaacaact 32364744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 254 - 317
Target Start/End: Original strand, 43141880 - 43141943
Alignment:
Q  254 ttttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatgcgcatgacata 317  Q
    ||||||||| ||||| || |||||||||| ||||||  ||||||||||||||| ||||| ||||    
T  43141880 ttttcataagctatcctgaagagtttatggaaataaaatgaaaacaacttatgggcatgtcata 43141943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 259 - 306
Target Start/End: Complemental strand, 44458394 - 44458347
Alignment:
Q  259 ataaactatcatggagagtttatgaaaataagctgaaaacaacttatg 306  Q
    |||| ||||||||||||||||||  ||||||||| |||||||||||||    
T  44458394 ataagctatcatggagagtttatataaataagctaaaaacaacttatg 44458347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 264 - 306
Target Start/End: Complemental strand, 7928350 - 7928308
Alignment:
Q  264 ctatcatggagagtttatgaaaataagctgaaaacaacttatg 306  Q
    ||||| ||||||  |||||||||||||||||||||||||||||    
T  7928350 ctatcttggagaacttatgaaaataagctgaaaacaacttatg 7928308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 303
Target Start/End: Complemental strand, 8187519 - 8187465
Alignment:
Q  249 aactattttcataaactatcatggagagtttatgaaaataagctgaaaacaactt 303  Q
    |||| ||||||||| ||| ||||||||| ||||| |||||| |||||||||||||    
T  8187519 aactgttttcataagctaccatggagagattatggaaataacctgaaaacaactt 8187465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 306
Target Start/End: Complemental strand, 9530791 - 9530737
Alignment:
Q  252 tattttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatg 306  Q
    ||||||||||| ||||| ||||||| |||||||| |||||| |||| ||||||||    
T  9530791 tattttcataagctatcctggagagcttatgaaagtaagctaaaaataacttatg 9530737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 254 - 332
Target Start/End: Original strand, 33941918 - 33941996
Alignment:
Q  254 ttttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatgcgcatgacatagattgttttcataag 332  Q
    ||||||||| ||||| |||||||||||||| |||||| ||||| || ||||||  | || ||||  |||||||||||||    
T  33941918 ttttcataagctatcttggagagtttatgataataagttgaaagcagcttatgaacttgtcataagttgttttcataag 33941996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 254 - 312
Target Start/End: Complemental strand, 36415734 - 36415676
Alignment:
Q  254 ttttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatgcgcatg 312  Q
    ||||||||| |||||||| |||  ||| ||||||||| |||||||||||||||| ||||    
T  36415734 ttttcataagctatcatgtagaacttacgaaaataagatgaaaacaacttatgcacatg 36415676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 317
Target Start/End: Original strand, 42420003 - 42420069
Alignment:
Q  251 ctattttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatgcgcatgacata 317  Q
    |||||||||||| ||||| |||| || ||||| |||| |||||||||||| |||||  |||||||||    
T  42420003 ctattttcataagctatcctggatagcttatggaaatgagctgaaaacaatttatgaacatgacata 42420069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 332
Target Start/End: Complemental strand, 44606147 - 44606093
Alignment:
Q  278 ttatgaaaataagctgaaaacaacttatgcgcatgacatagattgttttcataag 332  Q
    |||||||||| ||||||||||||||||||  |||| ||||  |||||||||||||    
T  44606147 ttatgaaaatcagctgaaaacaacttatggacatgtcataagttgttttcataag 44606093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 259 - 332
Target Start/End: Original strand, 1647250 - 1647323
Alignment:
Q  259 ataaactatcatggagagtttatgaaaataagctgaaaacaacttatgcgcatgacatagattgttttcataag 332  Q
    |||| |||| || ||||| ||||| |||||||||||||||| |||||| ||||| ||||   ||||||||||||    
T  1647250 ataagctattatagagagcttatggaaataagctgaaaacagcttatgagcatgtcataagctgttttcataag 1647323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 298
Target Start/End: Complemental strand, 3067445 - 3067396
Alignment:
Q  249 aactattttcataaactatcatggagagtttatgaaaataagctgaaaac 298  Q
    |||| ||||||||| ||||| || |||||||||||||||||||| |||||    
T  3067445 aactgttttcataagctatcttgaagagtttatgaaaataagctaaaaac 3067396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 306
Target Start/End: Original strand, 10567061 - 10567118
Alignment:
Q  249 aactattttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatg 306  Q
    |||| ||| ||||||||||  ||||||| || ||||||| ||||||||||||||||||    
T  10567061 aactgtttccataaactattctggagagcttgtgaaaattagctgaaaacaacttatg 10567118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 331
Target Start/End: Complemental strand, 12313230 - 12313157
Alignment:
Q  258 cataaactatcatggagagtttatgaaaataagctgaaaacaacttatgcgcatgacatagattgttttcataa 331  Q
    ||||| ||||| ||||||| ||||||||||||| ||||| |||||||||  |||| ||||   |||||||||||    
T  12313230 cataagctatcttggagagcttatgaaaataaggtgaaatcaacttatgaacatggcataagctgttttcataa 12313157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 335
Target Start/End: Original strand, 15120192 - 15120273
Alignment:
Q  254 ttttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatgcgcatgacatagattgttttcataagctc 335  Q
    ||||| ||| ||||||||||||| |||| |||||||||| |||||| || |||  |||| ||||  |||||| |||||||||    
T  15120192 ttttcgtaagctatcatggagagcttatcaaaataagcttaaaacagctaatgaacatgtcataagttgtttccataagctc 15120273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 299
Target Start/End: Complemental strand, 27699590 - 27699545
Alignment:
Q  254 ttttcataaactatcatggagagtttatgaaaataagctgaaaaca 299  Q
    |||||||||||||||||||||| |  ||| ||||||||||||||||    
T  27699590 ttttcataaactatcatggagaatcgatggaaataagctgaaaaca 27699545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 332
Target Start/End: Original strand, 33192212 - 33192289
Alignment:
Q  255 tttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatgcgcatgacatagattgttttcataag 332  Q
    |||||||| ||||| ||||||| |||| || |||||||||||||| ||||||   ||| |||| | ||||||||||||    
T  33192212 tttcataagctatcctggagagcttataaatataagctgaaaacagcttatggatatgtcataaactgttttcataag 33192289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 306
Target Start/End: Complemental strand, 1493550 - 1493522
Alignment:
Q  278 ttatgaaaataagctgaaaacaacttatg 306  Q
    |||||||||||||||||||||||||||||    
T  1493550 ttatgaaaataagctgaaaacaacttatg 1493522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 306
Target Start/End: Complemental strand, 3227744 - 3227692
Alignment:
Q  254 ttttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatg 306  Q
    ||||||||| ||||  ||||||| || |||||||||||||||||||| |||||    
T  3227744 ttttcataagctattttggagagattttgaaaataagctgaaaacaatttatg 3227692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 306
Target Start/End: Complemental strand, 3235445 - 3235393
Alignment:
Q  254 ttttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatg 306  Q
    |||||||| |||||| || | |||||||| |||||||||||||||| ||||||    
T  3235445 ttttcatatactatcttgaaaagtttatggaaataagctgaaaacagcttatg 3235393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 306
Target Start/End: Original strand, 16867748 - 16867800
Alignment:
Q  254 ttttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatg 306  Q
    |||||| || ||||| ||||||| ||||| ||||||| |||||||||||||||    
T  16867748 ttttcacaagctatcttggagagcttatggaaataagttgaaaacaacttatg 16867800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 306
Target Start/End: Complemental strand, 19333386 - 19333334
Alignment:
Q  254 ttttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatg 306  Q
    ||||| ||||||||  ||||||| ||||||||||||||||| |||| ||||||    
T  19333386 ttttcttaaactatattggagagcttatgaaaataagctgagaacagcttatg 19333334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 298
Target Start/End: Original strand, 24097817 - 24097861
Alignment:
Q  254 ttttcataaactatcatggagagtttatgaaaataagctgaaaac 298  Q
    |||||||||  |||| ||||||| |||||||||||||||||||||    
T  24097817 ttttcataagttatcctggagagcttatgaaaataagctgaaaac 24097861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 258 - 306
Target Start/End: Complemental strand, 35993437 - 35993389
Alignment:
Q  258 cataaactatcatggagagtttatgaaaataagctgaaaacaacttatg 306  Q
    ||||| ||||||| ||||  ||||||||||||||||||||||| |||||    
T  35993437 cataagctatcatagagaacttatgaaaataagctgaaaacaatttatg 35993389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 306
Target Start/End: Complemental strand, 38078471 - 38078419
Alignment:
Q  254 ttttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatg 306  Q
    ||||||||| ||||| ||||||| ||||| |||| |||| |||||||||||||    
T  38078471 ttttcataagctatcttggagagcttatgtaaatgagctcaaaacaacttatg 38078419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 305
Target Start/End: Complemental strand, 41032997 - 41032965
Alignment:
Q  273 agagtttatgaaaataagctgaaaacaacttat 305  Q
    |||||||||| ||||||||||||||||||||||    
T  41032997 agagtttatggaaataagctgaaaacaacttat 41032965  T

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Target: chr1 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 56)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 251 - 335
Target Start/End: Original strand, 10439692 - 10439776
Alignment:
Q  251 ctattttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatgcgcatgacatagattgttttcataagctc 335  Q
    |||| |||| |||||||| ||||||||||||| ||||||||||||| ||  |||||  |||| ||||| ||||||||||||||||    
T  10439692 ctatattcaaaaactatcctggagagtttatggaaataagctgaaagcagattatggacatgtcatagtttgttttcataagctc 10439776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 251 - 306
Target Start/End: Complemental strand, 14630030 - 14629975
Alignment:
Q  251 ctattttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatg 306  Q
    |||||||||||| ||||| |||||| |||||| |||||||||||||||||||||||    
T  14630030 ctattttcataagctatcttggagactttatggaaataagctgaaaacaacttatg 14629975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 249 - 302
Target Start/End: Complemental strand, 4700132 - 4700079
Alignment:
Q  249 aactattttcataaactatcatggagagtttatgaaaataagctgaaaacaact 302  Q
    |||| |||| |||||||||| ||||||| |||||||||||||||||||||||||    
T  4700132 aactgtttttataaactatcctggagagcttatgaaaataagctgaaaacaact 4700079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 254 - 306
Target Start/End: Complemental strand, 12477348 - 12477296
Alignment:
Q  254 ttttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatg 306  Q
    |||| |||| |||||||||||||| |||| |||||||||||||||||||||||    
T  12477348 ttttaataagctatcatggagagtgtatggaaataagctgaaaacaacttatg 12477296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 254 - 306
Target Start/End: Original strand, 27140487 - 27140539
Alignment:
Q  254 ttttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatg 306  Q
    |||| |||| ||||||||||||| ||||| |||||||||||||||||||||||    
T  27140487 tttttataagctatcatggagagcttatgcaaataagctgaaaacaacttatg 27140539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 254 - 306
Target Start/End: Original strand, 45975699 - 45975751
Alignment:
Q  254 ttttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatg 306  Q
    ||||||||| ||||| |||||| ||||||||||||||||||||||| ||||||    
T  45975699 ttttcataagctatcttggagaatttatgaaaataagctgaaaacagcttatg 45975751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 251 - 306
Target Start/End: Original strand, 6292499 - 6292554
Alignment:
Q  251 ctattttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatg 306  Q
    |||||||| ||||||||  ||||||| |||||||||||||||||||||| ||||||    
T  6292499 ctattttcgtaaactattttggagagcttatgaaaataagctgaaaacagcttatg 6292554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 254 - 337
Target Start/End: Original strand, 25479590 - 25479673
Alignment:
Q  254 ttttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatgcgcatgacatagattgttttcataagctcac 337  Q
    ||||||||| ||||| | ||||| ||||||||||||||||||||||||| |||  |||| ||||   | |||||||||||||||    
T  25479590 ttttcataagctatcctagagagcttatgaaaataagctgaaaacaactaatgaacatgtcataatctattttcataagctcac 25479673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 256 - 335
Target Start/End: Complemental strand, 26462000 - 26461921
Alignment:
Q  256 ttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatgcgcatgacatagattgttttcataagctc 335  Q
    ||||||| ||||| || |||| ||||||||||||||||||||||||  |||  |||| ||||  ||||||||||||||||    
T  26462000 ttcataagctatcctgcagagcttatgaaaataagctgaaaacaacccatggacatgccatatgttgttttcataagctc 26461921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 255 - 302
Target Start/End: Complemental strand, 35590952 - 35590905
Alignment:
Q  255 tttcataaactatcatggagagtttatgaaaataagctgaaaacaact 302  Q
    |||||||| ||||||||||||| ||||| |||||||||||||||||||    
T  35590952 tttcataagctatcatggagagcttatggaaataagctgaaaacaact 35590905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 264 - 306
Target Start/End: Original strand, 15361059 - 15361101
Alignment:
Q  264 ctatcatggagagtttatgaaaataagctgaaaacaacttatg 306  Q
    ||||| ||||||| |||||||||||||||||||||||||||||    
T  15361059 ctatcctggagagcttatgaaaataagctgaaaacaacttatg 15361101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 258 - 332
Target Start/End: Original strand, 35925703 - 35925777
Alignment:
Q  258 cataaactatcatggagagtttatgaaaataagctgaaaacaacttatgcgcatgacatagattgttttcataag 332  Q
    ||||| ||||||||||||||||||| ||||||| |||||||| ||||||  |||| ||||   ||||||||||||    
T  35925703 cataagctatcatggagagtttatggaaataagttgaaaacagcttatgaacatgtcataagctgttttcataag 35925777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 254 - 304
Target Start/End: Original strand, 45205077 - 45205127
Alignment:
Q  254 ttttcataaactatcatggagagtttatgaaaataagctgaaaacaactta 304  Q
    ||||||||| |||||||| |||||| ||| |||||||||||||||||||||    
T  45205077 ttttcataagctatcatgtagagttcatggaaataagctgaaaacaactta 45205127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 259 - 317
Target Start/End: Original strand, 47877123 - 47877181
Alignment:
Q  259 ataaactatcatggagagtttatgaaaataagctgaaaacaacttatgcgcatgacata 317  Q
    |||| |||| ||||| || ||||||||||||||||||||||||||||| ||||| ||||    
T  47877123 ataagctattatggaaagcttatgaaaataagctgaaaacaacttatgagcatgtcata 47877181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 249 - 306
Target Start/End: Original strand, 6279403 - 6279460
Alignment:
Q  249 aactattttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatg 306  Q
    |||||||||||||| ||||| | ||||| ||||| ||||| |||||||||||||||||    
T  6279403 aactattttcataagctatcctagagagcttatggaaatacgctgaaaacaacttatg 6279460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 249 - 306
Target Start/End: Original strand, 11211122 - 11211179
Alignment:
Q  249 aactattttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatg 306  Q
    |||||||||||||| || | |||||||||||||| ||||||| | |||||||||||||    
T  11211122 aactattttcataagctgttatggagagtttatggaaataagttaaaaacaacttatg 11211179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 332
Target Start/End: Complemental strand, 4699678 - 4699598
Alignment:
Q  252 tattttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatgcgcatgacatagattgttttcataag 332  Q
    |||||||||||||||||  |||||| ||||  ||||||||| |||||| ||||||  |||| ||||  |||||||||||||    
T  4699678 tattttcataaactatcccggagagcttatagaaataagctaaaaacagcttatgaacatgtcataagttgttttcataag 4699598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 306
Target Start/End: Complemental strand, 7137059 - 7137007
Alignment:
Q  254 ttttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatg 306  Q
    ||||||||| ||||| ||||||  |||||||||||||||||||| ||||||||    
T  7137059 ttttcataagctatcttggagaacttatgaaaataagctgaaaataacttatg 7137007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 306
Target Start/End: Complemental strand, 10199469 - 10199417
Alignment:
Q  254 ttttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatg 306  Q
    ||||||||| ||||  | ||||| |||||||||||||||||||||||||||||    
T  10199469 ttttcataagctattttagagagcttatgaaaataagctgaaaacaacttatg 10199417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 303
Target Start/End: Original strand, 15784303 - 15784387
Alignment:
Q  219 ggtaaaattaagttaaattgtttccgtatgaactattttcataaactatcatggagagtttatgaaaataagctgaaaacaactt 303  Q
    |||||||| |||||||||||||| ||||| | ||  ||| |||| ||||| ||||||  || |||||||||||| ||||||||||    
T  15784303 ggtaaaataaagttaaattgttttcgtataagctggttttataagctatcttggagaacttgtgaaaataagctaaaaacaactt 15784387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 306
Target Start/End: Complemental strand, 27887179 - 27887127
Alignment:
Q  254 ttttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatg 306  Q
    |||||||||||||||||||||||  ||| |||||||||| ||||||| |||||    
T  27887179 ttttcataaactatcatggagagcatataaaaataagctaaaaacaatttatg 27887127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 305
Target Start/End: Complemental strand, 34179938 - 34179882
Alignment:
Q  249 aactattttcataaactatcatggagagtttatgaaaataagctgaaaacaacttat 305  Q
    |||| ||||||||||||||| || | |||||||| ||||| ||||||||||||||||    
T  34179938 aactgttttcataaactatcctgaaaagtttatggaaatacgctgaaaacaacttat 34179882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 306
Target Start/End: Original strand, 34290245 - 34290297
Alignment:
Q  254 ttttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatg 306  Q
    ||||||||| ||||| || |||  |||||||||||||||||||||||||||||    
T  34290245 ttttcataagctatcttgaagaacttatgaaaataagctgaaaacaacttatg 34290297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 306
Target Start/End: Original strand, 37240851 - 37240903
Alignment:
Q  254 ttttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatg 306  Q
    ||||||||||||||| | ||| ||||||||||||||||||| |||| ||||||    
T  37240851 ttttcataaactatccttgagggtttatgaaaataagctgataacatcttatg 37240903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 306
Target Start/End: Complemental strand, 39348028 - 39347976
Alignment:
Q  254 ttttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatg 306  Q
    ||||||||||||||| || | || ||||| |||||||||||||||||||||||    
T  39348028 ttttcataaactatcctgcaaagcttatggaaataagctgaaaacaacttatg 39347976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 297
Target Start/End: Complemental strand, 41195259 - 41195211
Alignment:
Q  249 aactattttcataaactatcatggagagtttatgaaaataagctgaaaa 297  Q
    |||| ||||||||||||||| ||||||  ||||||||||||||||||||    
T  41195259 aactgttttcataaactatcttggagaacttatgaaaataagctgaaaa 41195211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 258 - 306
Target Start/End: Complemental strand, 46252739 - 46252691
Alignment:
Q  258 cataaactatcatggagagtttatgaaaataagctgaaaacaacttatg 306  Q
    ||||| ||||| ||||||| |||||||||||| ||||||||||||||||    
T  46252739 cataagctatcttggagagcttatgaaaataacctgaaaacaacttatg 46252691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 306
Target Start/End: Complemental strand, 51695556 - 51695504
Alignment:
Q  254 ttttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatg 306  Q
    ||||||||| ||||| |||||| ||||||||||||||||||||| | ||||||    
T  51695556 ttttcataagctatcttggagaatttatgaaaataagctgaaaatagcttatg 51695504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 298
Target Start/End: Original strand, 52190138 - 52190182
Alignment:
Q  254 ttttcataaactatcatggagagtttatgaaaataagctgaaaac 298  Q
    ||||||||| ||||||||||||| ||| |||||||||||||||||    
T  52190138 ttttcataagctatcatggagagcttacgaaaataagctgaaaac 52190182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 251 - 306
Target Start/End: Original strand, 2294917 - 2294972
Alignment:
Q  251 ctattttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatg 306  Q
    |||||||||||||||||| ||||||  ||| ||||||||| |||||||| ||||||    
T  2294917 ctattttcataaactatcttggagaacttacgaaaataaggtgaaaacagcttatg 2294972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 255 - 306
Target Start/End: Complemental strand, 11893653 - 11893602
Alignment:
Q  255 tttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatg 306  Q
    |||||||| ||||  || |||||||||| |||||||||||||||||||||||    
T  11893653 tttcataagctattttgaagagtttatggaaataagctgaaaacaacttatg 11893602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 254 - 305
Target Start/End: Complemental strand, 12564560 - 12564509
Alignment:
Q  254 ttttcataaactatcatggagagtttatgaaaataagctgaaaacaacttat 305  Q
    ||||||||| ||||| ||||||  ||||| ||||||||||||||||||||||    
T  12564560 ttttcataagctatcttggagaacttatggaaataagctgaaaacaacttat 12564509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 259 - 306
Target Start/End: Complemental strand, 28689508 - 28689461
Alignment:
Q  259 ataaactatcatggagagtttatgaaaataagctgaaaacaacttatg 306  Q
    |||| ||||| |||| || |||||||||||||||||||||||||||||    
T  28689508 ataagctatcttggaaagcttatgaaaataagctgaaaacaacttatg 28689461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 254 - 332
Target Start/End: Original strand, 3924633 - 3924711
Alignment:
Q  254 ttttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatgcgcatgacatagattgttttcataag 332  Q
    |||| |||| ||||| || |||||||||| |||||||| |||||||||||||   |||  |||| ||||||||||||||    
T  3924633 tttttataagctatcctgaagagtttatggaaataagccgaaaacaacttataaacatttcataaattgttttcataag 3924711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 256 - 306
Target Start/End: Complemental strand, 31517799 - 31517749
Alignment:
Q  256 ttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatg 306  Q
    ||||||| || || ||||||| |||||||||||||||||||||| ||||||    
T  31517799 ttcataatctgtcttggagagcttatgaaaataagctgaaaacagcttatg 31517749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 264 - 306
Target Start/End: Complemental strand, 38503516 - 38503474
Alignment:
Q  264 ctatcatggagagtttatgaaaataagctgaaaacaacttatg 306  Q
    ||||| ||||||  |||||||||||||||||||||||||||||    
T  38503516 ctatcttggagaacttatgaaaataagctgaaaacaacttatg 38503474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 305
Target Start/End: Original strand, 43113117 - 43113171
Alignment:
Q  251 ctattttcataaactatcatggagagtttatgaaaataagctgaaaacaacttat 305  Q
    |||| ||||||| ||||||||||||| ||||||| ||||||| ||||||| ||||    
T  43113117 ctatattcataagctatcatggagaggttatgaacataagctcaaaacaatttat 43113171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 297
Target Start/End: Original strand, 601060 - 601093
Alignment:
Q  264 ctatcatggagagtttatgaaaataagctgaaaa 297  Q
    ||||| ||||||||||||||||||||||||||||    
T  601060 ctatcctggagagtttatgaaaataagctgaaaa 601093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 306
Target Start/End: Original strand, 4025104 - 4025145
Alignment:
Q  265 tatcatggagagtttatgaaaataagctgaaaacaacttatg 306  Q
    |||| ||||||||| ||| |||||||||||||||||||||||    
T  4025104 tatcctggagagttaatggaaataagctgaaaacaacttatg 4025145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 299
Target Start/End: Original strand, 5047155 - 5047200
Alignment:
Q  254 ttttcataaactatcatggagagtttatgaaaataagctgaaaaca 299  Q
    ||||||||| |||||||| |||| ||||| ||||||||||||||||    
T  5047155 ttttcataagctatcatgaagagcttatggaaataagctgaaaaca 5047200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 323
Target Start/End: Original strand, 6981517 - 6981570
Alignment:
Q  270 tggagagtttatgaaaataagctgaaaacaacttatgcgcatgacatagattgt 323  Q
    ||||||||||||| ||||| ||||||||||||||||   ||||||||| |||||    
T  6981517 tggagagtttatggaaatatgctgaaaacaacttattgacatgacataaattgt 6981570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 299
Target Start/End: Original strand, 7472324 - 7472365
Alignment:
Q  258 cataaactatcatggagagtttatgaaaataagctgaaaaca 299  Q
    ||||| ||||| ||||||| ||||||||||||||||||||||    
T  7472324 cataagctatcttggagagcttatgaaaataagctgaaaaca 7472365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 306
Target Start/End: Complemental strand, 16981994 - 16981945
Alignment:
Q  257 tcataaactatcatggagagtttatgaaaataagctgaaaacaacttatg 306  Q
    |||||| ||||||||||||| ||||  ||||||||| |||||||||||||    
T  16981994 tcataagctatcatggagagcttatataaataagctaaaaacaacttatg 16981945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 259 - 296
Target Start/End: Original strand, 24702254 - 24702291
Alignment:
Q  259 ataaactatcatggagagtttatgaaaataagctgaaa 296  Q
    |||||||||||||||||| ||||||||||||| |||||    
T  24702254 ataaactatcatggagagcttatgaaaataaggtgaaa 24702291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 311
Target Start/End: Original strand, 35179148 - 35179205
Alignment:
Q  254 ttttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatgcgcat 311  Q
    |||||||||  ||| |||||||  |||||||||||||||||||||| |||||| ||||    
T  35179148 ttttcataagttattatggagaacttatgaaaataagctgaaaacagcttatgggcat 35179205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 305
Target Start/End: Original strand, 35351050 - 35351099
Alignment:
Q  256 ttcataaactatcatggagagtttatgaaaataagctgaaaacaacttat 305  Q
    ||||||||||||| | ||||| |||  |||||||||||||||||||||||    
T  35351050 ttcataaactatcctagagagcttacaaaaataagctgaaaacaacttat 35351099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 311
Target Start/End: Complemental strand, 42556692 - 42556635
Alignment:
Q  254 ttttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatgcgcat 311  Q
    ||||||||| ||||||||||||||||||   ||||| ||||||| |||||||| ||||    
T  42556692 ttttcataagctatcatggagagtttatatcaataaactgaaaataacttatgagcat 42556635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 306
Target Start/End: Original strand, 489069 - 489121
Alignment:
Q  254 ttttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatg 306  Q
    |||||| || ||||||||||||| || | ||||||||||||||||| ||||||    
T  489069 ttttcacaagctatcatggagagattgtaaaaataagctgaaaacagcttatg 489121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 306
Target Start/End: Original strand, 6102163 - 6102215
Alignment:
Q  254 ttttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatg 306  Q
    ||||||||| |||||  ||||| |||||| ||||||||||||||||| |||||    
T  6102163 ttttcataagctatctgggagaatttatggaaataagctgaaaacaatttatg 6102215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 317
Target Start/End: Original strand, 16322877 - 16322921
Alignment:
Q  273 agagtttatgaaaataagctgaaaacaacttatgcgcatgacata 317  Q
    |||| ||||| ||||||||| ||||||||||||| ||||||||||    
T  16322877 agagcttatggaaataagctaaaaacaacttatgtgcatgacata 16322921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 306
Target Start/End: Complemental strand, 26779986 - 26779934
Alignment:
Q  254 ttttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatg 306  Q
    ||||||||| ||||| || |||  ||||||||||||| |||||||||||||||    
T  26779986 ttttcataagctatcttgaagaacttatgaaaataagttgaaaacaacttatg 26779934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 306
Target Start/End: Complemental strand, 27820398 - 27820346
Alignment:
Q  254 ttttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatg 306  Q
    |||| |||| ||||| |||||| ||||||||||||||||||||| | ||||||    
T  27820398 tttttataagctatcttggagaatttatgaaaataagctgaaaatagcttatg 27820346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 306
Target Start/End: Complemental strand, 27963431 - 27963379
Alignment:
Q  254 ttttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatg 306  Q
    ||||||||| |||| |||||||| ||||  ||||||||| |||||||||||||    
T  27963431 ttttcataagctattatggagagcttatataaataagctaaaaacaacttatg 27963379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 306
Target Start/End: Original strand, 30257692 - 30257744
Alignment:
Q  254 ttttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatg 306  Q
    ||||||||||||||| ||||| | ||||  |||||||||||||||| ||||||    
T  30257692 ttttcataaactatcctggagggcttatagaaataagctgaaaacagcttatg 30257744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 253 - 297
Target Start/End: Original strand, 43338124 - 43338168
Alignment:
Q  253 attttcataaactatcatggagagtttatgaaaataagctgaaaa 297  Q
    |||||||||| ||| ||||||||| ||||||||||| ||||||||    
T  43338124 attttcataagctaacatggagagcttatgaaaataggctgaaaa 43338168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 306
Target Start/End: Complemental strand, 47598482 - 47598430
Alignment:
Q  254 ttttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatg 306  Q
    ||||||||| ||||| ||||||| |||||  || |||||||||||||||||||    
T  47598482 ttttcataagctatcctggagagcttatggcaacaagctgaaaacaacttatg 47598430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 254 - 304
Target Start/End: Complemental strand, 10272492 - 10272442
Alignment:
Q  254 ttttcataaactatcatggagagtttatgaaaataagctgaaaacaactta 304  Q
    ||||||||| | ||| |||||||||||||||||||||||||||||||||||    
T  10272492 ttttcataagccatcttggagagtttatgaaaataagctgaaaacaactta 10272442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 254 - 306
Target Start/End: Original strand, 7984978 - 7985030
Alignment:
Q  254 ttttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatg 306  Q
    ||||||||| ||||| |||||| ||||||||||||||||||||||| ||||||    
T  7984978 ttttcataagctatcttggagaatttatgaaaataagctgaaaacagcttatg 7985030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 254 - 306
Target Start/End: Complemental strand, 17258944 - 17258892
Alignment:
Q  254 ttttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatg 306  Q
    ||||||||||||||| || |||| |||||||||||||||||||||| ||||||    
T  17258944 ttttcataaactatcctgaagagcttatgaaaataagctgaaaacagcttatg 17258892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 254 - 340
Target Start/End: Complemental strand, 37611276 - 37611190
Alignment:
Q  254 ttttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatgcgcatgacatagattgttttcataagctcactca 340  Q
    ||||||||| ||||| ||||||| ||||| |||||| ||||||||| ||||||  |||| || |  |||||||||||||||| ||||    
T  37611276 ttttcataagctatcttggagagcttatggaaataacctgaaaacagcttatgaacatgtcacaagttgttttcataagctctctca 37611190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 254 - 340
Target Start/End: Complemental strand, 37788006 - 37787920
Alignment:
Q  254 ttttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatgcgcatgacatagattgttttcataagctcactca 340  Q
    ||||||||| ||||| ||||||| ||||| |||||| ||||||||| ||||||  |||| || |  |||||||||||||||| ||||    
T  37788006 ttttcataagctatcttggagagcttatggaaataacctgaaaacagcttatgaacatgtcacaagttgttttcataagctctctca 37787920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 249 - 306
Target Start/End: Complemental strand, 7319074 - 7319017
Alignment:
Q  249 aactattttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatg 306  Q
    |||| ||||||||| ||||| ||||||  ||||||||||||||||| |||||||||||    
T  7319074 aactgttttcataagctatcttggagaacttatgaaaataagctgagaacaacttatg 7319017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 252 - 305
Target Start/End: Complemental strand, 10125781 - 10125728
Alignment:
Q  252 tattttcataaactatcatggagagtttatgaaaataagctgaaaacaacttat 305  Q
    |||||||||||  || ||||||||| |||||||||||||||||||||| |||||    
T  10125781 tattttcataagttaccatggagagcttatgaaaataagctgaaaacaccttat 10125728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 306
Target Start/End: Original strand, 2568667 - 2568719
Alignment:
Q  254 ttttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatg 306  Q
    ||||||||| ||||||||||||| | ||||||||||||| |||| ||||||||    
T  2568667 ttttcataagctatcatggagagctaatgaaaataagctaaaaataacttatg 2568719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 306
Target Start/End: Complemental strand, 4014485 - 4014433
Alignment:
Q  254 ttttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatg 306  Q
    ||||||||| ||||| ||||||  |||||||||||||||||||||| ||||||    
T  4014485 ttttcataagctatcttggagaacttatgaaaataagctgaaaacagcttatg 4014433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 270 - 317
Target Start/End: Original strand, 1899179 - 1899226
Alignment:
Q  270 tggagagtttatgaaaataagctgaaaacaacttatgcgcatgacata 317  Q
    |||||| |||||| |||||||||||||||||||||||| |||| ||||    
T  1899179 tggagaatttatggaaataagctgaaaacaacttatgcacatgtcata 1899226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 254 - 305
Target Start/End: Original strand, 7674657 - 7674708
Alignment:
Q  254 ttttcataaactatcatggagagtttatgaaaataagctgaaaacaacttat 305  Q
    ||||||||| ||||| |||||| ||| ||||||||||||||||||| |||||    
T  7674657 ttttcataagctatcttggagaatttgtgaaaataagctgaaaacaccttat 7674708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 254 - 305
Target Start/End: Original strand, 11707064 - 11707115
Alignment:
Q  254 ttttcataaactatcatggagagtttatgaaaataagctgaaaacaacttat 305  Q
    ||||||||| ||||| || |||| || |||||||||||||||||||||||||    
T  11707064 ttttcataagctatcttgtagagcttttgaaaataagctgaaaacaacttat 11707115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 269 - 340
Target Start/End: Complemental strand, 37690682 - 37690611
Alignment:
Q  269 atggagagtttatgaaaataagctgaaaacaacttatgcgcatgacatagattgttttcataagctcactca 340  Q
    |||||||| ||||| |||||||||||||||| |||||   |||| ||||| |||| ||||||||||| ||||    
T  37690682 atggagagcttatggaaataagctgaaaacagcttattaacatgtcataggttgtattcataagctctctca 37690611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 264 - 306
Target Start/End: Complemental strand, 8177583 - 8177541
Alignment:
Q  264 ctatcatggagagtttatgaaaataagctgaaaacaacttatg 306  Q
    ||||| ||||||| |||||||||||| ||||||||||||||||    
T  8177583 ctatcctggagagcttatgaaaataacctgaaaacaacttatg 8177541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 254 - 304
Target Start/End: Original strand, 8938655 - 8938705
Alignment:
Q  254 ttttcataaactatcatggagagtttatgaaaataagctgaaaacaactta 304  Q
    |||||||||||| |   |||||||||||||||||||||| |||||||||||    
T  8938655 ttttcataaactttgcaggagagtttatgaaaataagctaaaaacaactta 8938705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 254 - 340
Target Start/End: Complemental strand, 12242771 - 12242685
Alignment:
Q  254 ttttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatgcgcatgacatagattgttttcataagctcactca 340  Q
    ||||||||| ||||| ||||||| ||||| || |||||||||||||||| |||  |||| ||||  || ||| ||||||||| ||||    
T  12242771 ttttcataagctatcttggagagcttatggaagtaagctgaaaacaactaatgttcatgtcataagttttttccataagctctctca 12242685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 254 - 332
Target Start/End: Original strand, 17368685 - 17368763
Alignment:
Q  254 ttttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatgcgcatgacatagattgttttcataag 332  Q
    ||||||||| ||||| ||||||| ||||| |||||||||||||||  | ||||  |||| ||||  |||||||||||||    
T  17368685 ttttcataagctatcttggagaggttatggaaataagctgaaaactgcatatgaacatgtcataagttgttttcataag 17368763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 256 - 306
Target Start/End: Complemental strand, 28413343 - 28413293
Alignment:
Q  256 ttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatg 306  Q
    |||||||  |||| ||||||||||||| |||||||||||||||| ||||||    
T  28413343 ttcataagttatcttggagagtttatggaaataagctgaaaacagcttatg 28413293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 254 - 304
Target Start/End: Original strand, 36318783 - 36318833
Alignment:
Q  254 ttttcataaactatcatggagagtttatgaaaataagctgaaaacaactta 304  Q
    ||||||||| ||||| |||||| |||||| |||||||||||||||| ||||    
T  36318783 ttttcataagctatcttggagaatttatgtaaataagctgaaaacagctta 36318833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 270 - 340
Target Start/End: Complemental strand, 37526244 - 37526174
Alignment:
Q  270 tggagagtttatgaaaataagctgaaaacaacttatgcgcatgacatagattgttttcataagctcactca 340  Q
    ||||||| ||||| |||||||||||||||| |||||   |||| ||||| |||| ||||||||||| ||||    
T  37526244 tggagagcttatggaaataagctgaaaacagcttattaacatgtcataggttgtattcataagctctctca 37526174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 255 - 305
Target Start/End: Complemental strand, 38104917 - 38104867
Alignment:
Q  255 tttcataaactatcatggagagtttatgaaaataagctgaaaacaacttat 305  Q
    |||||||| ||||| | ||||| ||||| ||||||||||||||||||||||    
T  38104917 tttcataagctatcttagagagcttatggaaataagctgaaaacaacttat 38104867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 306
Target Start/End: Complemental strand, 1019532 - 1019475
Alignment:
Q  249 aactattttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatg 306  Q
    |||| ||||| |||||| || | ||||||| ||||||||||| |||||||||||||||    
T  1019532 aactgttttcgtaaactctccttgagagttaatgaaaataagatgaaaacaacttatg 1019475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 335
Target Start/End: Complemental strand, 2092606 - 2092525
Alignment:
Q  254 ttttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatgcgcatgacatagattgttttcataagctc 335  Q
    ||||||| ||||||| || || ||||||||||| ||| |||||||||||||||  |||| ||||  ||||||  ||||||||    
T  2092606 ttttcattaactatcttgaagggtttatgaaaaaaagttgaaaacaacttatggacatgccataagttgtttcaataagctc 2092525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 335
Target Start/End: Complemental strand, 13604910 - 13604829
Alignment:
Q  254 ttttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatgcgcatgacatagattgttttcataagctc 335  Q
    |||||||||  |||| || |||| ||||||||||||| |||||||||| ||||  |||| ||||   |||||||||||||||    
T  13604910 ttttcataagttatcttgaagagcttatgaaaataagttgaaaacaacgtatggacatgtcataagctgttttcataagctc 13604829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 304
Target Start/End: Original strand, 36326021 - 36326070
Alignment:
Q  255 tttcataaactatcatggagagtttatgaaaataagctgaaaacaactta 304  Q
    |||| ||| ||||| |||||| |||||| |||||||||||||||||||||    
T  36326021 tttcgtaagctatcttggagaatttatgtaaataagctgaaaacaactta 36326070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 271 - 303
Target Start/End: Complemental strand, 499775 - 499743
Alignment:
Q  271 ggagagtttatgaaaataagctgaaaacaactt 303  Q
    |||||||||||| ||||||||||||||||||||    
T  499775 ggagagtttatggaaataagctgaaaacaactt 499743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 276 - 304
Target Start/End: Complemental strand, 4760703 - 4760675
Alignment:
Q  276 gtttatgaaaataagctgaaaacaactta 304  Q
    |||||||||||||||||||||||||||||    
T  4760703 gtttatgaaaataagctgaaaacaactta 4760675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 270 - 306
Target Start/End: Original strand, 7907906 - 7907942
Alignment:
Q  270 tggagagtttatgaaaataagctgaaaacaacttatg 306  Q
    ||||||| |||||||| ||||||||||||||||||||    
T  7907906 tggagagcttatgaaattaagctgaaaacaacttatg 7907942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 299
Target Start/End: Original strand, 8089303 - 8089335
Alignment:
Q  267 tcatggagagtttatgaaaataagctgaaaaca 299  Q
    |||||||||| ||||||||||||||||||||||    
T  8089303 tcatggagagcttatgaaaataagctgaaaaca 8089335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 202 - 306
Target Start/End: Original strand, 11615458 - 11615562
Alignment:
Q  202 ctatttttatgacaagtggtaaaattaagttaaattgtttccgtatgaactattttcataaactatcatggagagtttatgaaaataagctgaaaacaac 301  Q
    |||||||||| ||||  | |||||| |||| ||||||||| ||||| | || |||||||||  |||| |   ||| ||||| |||||||||||||||| |    
T  11615458 ctatttttataacaaaagataaaataaagtcaaattgtttacgtataagctgttttcataagatatccttatgagcttatggaaataagctgaaaacagc 11615557  T
Q  302 ttatg 306  Q
    |||||    
T  11615558 ttatg 11615562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 302
Target Start/End: Complemental strand, 18543257 - 18543210
Alignment:
Q  254 ttttcataaactatcatggagagtttatgaaaataagctgaaaacaact 302  Q
    ||||||||| ||||| ||||||| |||||||| ||||||||||||||||    
T  18543257 ttttcataagctatcctggagagcttatgaaa-taagctgaaaacaact 18543210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 258 - 306
Target Start/End: Original strand, 19460580 - 19460628
Alignment:
Q  258 cataaactatcatggagagtttatgaaaataagctgaaaacaacttatg 306  Q
    ||||| ||||||||||||| ||||| |||| ||||||||||| ||||||    
T  19460580 cataagctatcatggagagcttatggaaatgagctgaaaacatcttatg 19460628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 306
Target Start/End: Complemental strand, 33533600 - 33533548
Alignment:
Q  254 ttttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatg 306  Q
    |||||| || ||||| ||||||| ||||| ||||||| |||||||||||||||    
T  33533600 ttttcacaagctatcttggagagcttatggaaataagttgaaaacaacttatg 33533548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 306
Target Start/End: Original strand, 36639531 - 36639583
Alignment:
Q  254 ttttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatg 306  Q
    ||||||||| ||||| || |||| |||||||||||||  ||||||||||||||    
T  36639531 ttttcataagctatcttgaagagcttatgaaaataagaggaaaacaacttatg 36639583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 306
Target Start/End: Complemental strand, 41957512 - 41957460
Alignment:
Q  254 ttttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatg 306  Q
    ||||||||| ||||| | ||||  ||||||||||||| |||||||||||||||    
T  41957512 ttttcataagctatccttgagaacttatgaaaataagatgaaaacaacttatg 41957460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 35; Significance: 0.0000000001; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 256 - 306
Target Start/End: Original strand, 34939755 - 34939805
Alignment:
Q  256 ttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatg 306  Q
    ||||||| ||||| ||||||||||||| ||||||||||||||||| |||||    
T  34939755 ttcataagctatcctggagagtttatggaaataagctgaaaacaatttatg 34939805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 254 - 299
Target Start/End: Original strand, 1497990 - 1498035
Alignment:
Q  254 ttttcataaactatcatggagagtttatgaaaataagctgaaaaca 299  Q
    ||||||||||||||| ||||||| ||||||||||||| ||||||||    
T  1497990 ttttcataaactatcttggagagcttatgaaaataaggtgaaaaca 1498035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 253 - 306
Target Start/End: Complemental strand, 17241314 - 17241261
Alignment:
Q  253 attttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatg 306  Q
    |||||||| | ||||| ||||||||||||| ||||||| |||||||||||||||    
T  17241314 attttcattagctatcttggagagtttatggaaataagttgaaaacaacttatg 17241261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 306
Target Start/End: Original strand, 3528812 - 3528864
Alignment:
Q  254 ttttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatg 306  Q
    ||||||| ||||||| ||||||| ||||||||||||| ||||||||| |||||    
T  3528812 ttttcatgaactatcttggagagcttatgaaaataagatgaaaacaagttatg 3528864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 330
Target Start/End: Complemental strand, 27909683 - 27909623
Alignment:
Q  270 tggagagtttatgaaaataagctgaaaacaacttatgcgcatgacatagattgttttcata 330  Q
    ||||||| ||||| |||||||||||||||||||||||  |||| |||| ||||||| ||||    
T  27909683 tggagagcttatggaaataagctgaaaacaacttatggacatgtcatatattgtttccata 27909623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 252 - 335
Target Start/End: Original strand, 2455817 - 2455900
Alignment:
Q  252 tattttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatgcgcatgacatagattgttttcataagctc 335  Q
    ||||||||||| ||||| ||||||| ||||| ||||||| |||||| |  ||||| ||||| ||||  |||||| |||||||||    
T  2455817 tattttcataagctatcttggagagcttatggaaataagttgaaaatagtttatgggcatgtcataagttgtttccataagctc 2455900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 252 - 335
Target Start/End: Original strand, 4420650 - 4420733
Alignment:
Q  252 tattttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatgcgcatgacatagattgttttcataagctc 335  Q
    ||||||| ||| ||||| ||||||| ||||| |||||||||||||||| ||||||  |||| ||||  ||||||  ||||||||    
T  4420650 tattttcctaagctatcttggagagcttatggaaataagctgaaaacagcttatgaacatgtcataatttgtttctataagctc 4420733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 273 - 335
Target Start/End: Original strand, 9027606 - 9027668
Alignment:
Q  273 agagtttatgaaaataagctgaaaacaacttatgcgcatgacatagattgttttcataagctc 335  Q
    |||| |||||||||||||||||||||||||||||  |||| ||||  || ||| |||||||||    
T  9027606 agagcttatgaaaataagctgaaaacaacttatggacatgtcataagttatttccataagctc 9027668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 255 - 305
Target Start/End: Complemental strand, 20512704 - 20512654
Alignment:
Q  255 tttcataaactatcatggagagtttatgaaaataagctgaaaacaacttat 305  Q
    |||||||| |||| ||| |||| ||||| ||||||||||||||||||||||    
T  20512704 tttcataagctattatgaagagcttatggaaataagctgaaaacaacttat 20512654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 300
Target Start/End: Complemental strand, 24836300 - 24836217
Alignment:
Q  221 taaaattaagttaaattgtttccgtatgaactat----tttcataaactatcatggagagtttatgaaaataagctgaaaacaa 300  Q
    |||||| |||| ||||||||| ||||| ||||||    |||| ||| ||||||||||||| ||||| |||||||||| ||||||    
T  24836300 taaaataaagtcaaattgttttcgtataaactataagttttcgtaagctatcatggagagcttatggaaataagctggaaacaa 24836217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 294 - 340
Target Start/End: Complemental strand, 33500501 - 33500455
Alignment:
Q  294 aaaacaacttatgcgcatgacatagattgttttcataagctcactca 340  Q
    |||||||||||||| |||| |||| ||||||||||||||||| ||||    
T  33500501 aaaacaacttatgcacatgtcataaattgttttcataagctccctca 33500455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 299
Target Start/End: Complemental strand, 835310 - 835265
Alignment:
Q  254 ttttcataaactatcatggagagtttatgaaaataagctgaaaaca 299  Q
    ||||||||| ||||| ||||||  ||||||||||||||||||||||    
T  835310 ttttcataagctatcttggagaacttatgaaaataagctgaaaaca 835265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 306
Target Start/End: Original strand, 5328993 - 5329034
Alignment:
Q  265 tatcatggagagtttatgaaaataagctgaaaacaacttatg 306  Q
    |||||||||||||||||||||||||| ||||| || ||||||    
T  5328993 tatcatggagagtttatgaaaataagatgaaagcagcttatg 5329034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 297
Target Start/End: Original strand, 12230380 - 12230413
Alignment:
Q  264 ctatcatggagagtttatgaaaataagctgaaaa 297  Q
    ||||||||||||| ||||||||||||||||||||    
T  12230380 ctatcatggagagcttatgaaaataagctgaaaa 12230413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 305
Target Start/End: Complemental strand, 29837147 - 29837095
Alignment:
Q  252 tattttcataaactatcatggagagtttatgaaaataagctgaaaacaacttat 305  Q
    ||||||||||||||||| || |||| |||||||||| ||||| |||||||||||    
T  29837147 tattttcataaactatcctgaagagcttatgaaaattagctg-aaacaacttat 29837095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 278 - 335
Target Start/End: Original strand, 31420978 - 31421035
Alignment:
Q  278 ttatgaaaataagctgaaaacaacttatgcgcatgacatagattgttttcataagctc 335  Q
    |||||||||||||||||||||||||||||   |||  |||  ||||||||||||||||    
T  31420978 ttatgaaaataagctgaaaacaacttatgaatatgcgataagttgttttcataagctc 31421035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 299
Target Start/End: Complemental strand, 33911343 - 33911298
Alignment:
Q  254 ttttcataaactatcatggagagtttatgaaaataagctgaaaaca 299  Q
    ||||||||||||||| || | ||||| |||||||||||||||||||    
T  33911343 ttttcataaactatcctgaaaagtttgtgaaaataagctgaaaaca 33911298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 285 - 317
Target Start/End: Complemental strand, 3201977 - 3201945
Alignment:
Q  285 aataagctgaaaacaacttatgcgcatgacata 317  Q
    |||||||||||||||||||||||||||| ||||    
T  3201977 aataagctgaaaacaacttatgcgcatgtcata 3201945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 306
Target Start/End: Original strand, 4006723 - 4006775
Alignment:
Q  254 ttttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatg 306  Q
    ||||||||| |||||   ||||| |||||||||||||||||||| ||||||||    
T  4006723 ttttcataagctatccctgagaggttatgaaaataagctgaaaataacttatg 4006775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 306
Target Start/End: Original strand, 6647396 - 6647448
Alignment:
Q  254 ttttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatg 306  Q
    ||||||||| ||||| | ||||| ||||||||||||| |||||||| ||||||    
T  6647396 ttttcataagctatcttagagagcttatgaaaataagttgaaaacatcttatg 6647448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 264 - 304
Target Start/End: Original strand, 13908482 - 13908522
Alignment:
Q  264 ctatcatggagagtttatgaaaataagctgaaaacaactta 304  Q
    |||||||| |||| |||||||||||||||||||||| ||||    
T  13908482 ctatcatgaagagcttatgaaaataagctgaaaacagctta 13908522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 295
Target Start/End: Complemental strand, 24974480 - 24974436
Alignment:
Q  251 ctattttcataaactatcatggagagtttatgaaaataagctgaa 295  Q
    |||||||||||||||||  ||||||||||||| ||||||| ||||    
T  24974480 ctattttcataaactatgttggagagtttatggaaataagttgaa 24974436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 298
Target Start/End: Original strand, 26694887 - 26694931
Alignment:
Q  254 ttttcataaactatcatggagagtttatgaaaataagctgaaaac 298  Q
    ||||||||||||||| || |||  |||||||||||||||||||||    
T  26694887 ttttcataaactatcttgaagaacttatgaaaataagctgaaaac 26694931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 249 - 301
Target Start/End: Complemental strand, 28088288 - 28088236
Alignment:
Q  249 aactattttcataaactatcatggagagtttatgaaaataagctgaaaacaac 301  Q
    |||| ||||||||| ||||||||||||| | ||| ||||||||| ||||||||    
T  28088288 aactgttttcataagctatcatggagagctcatggaaataagctcaaaacaac 28088236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 335
Target Start/End: Original strand, 30863288 - 30863336
Alignment:
Q  287 taagctgaaaacaacttatgcgcatgacatagattgttttcataagctc 335  Q
    ||||||||||||||||||||  |||| ||||  ||||||||||||||||    
T  30863288 taagctgaaaacaacttatgtacatgtcataagttgttttcataagctc 30863336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 302
Target Start/End: Complemental strand, 31671135 - 31671087
Alignment:
Q  254 ttttcataaactatcatggagagtttatgaaaataagctgaaaacaact 302  Q
    ||||| ||||||||| | || || |||||||||||||||||||||||||    
T  31671135 ttttcgtaaactatcctagatagcttatgaaaataagctgaaaacaact 31671087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 306
Target Start/End: Complemental strand, 34430522 - 34430470
Alignment:
Q  254 ttttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatg 306  Q
    ||||||||| ||||| ||||||  |||||||||||||||||||| | ||||||    
T  34430522 ttttcataagctatcttggagaagttatgaaaataagctgaaaaaagcttatg 34430470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0089
Description:

Target: scaffold0089; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 255 - 305
Target Start/End: Complemental strand, 33687 - 33637
Alignment:
Q  255 tttcataaactatcatggagagtttatgaaaataagctgaaaacaacttat 305  Q
    |||||||| |||| ||| |||| ||||| ||||||||||||||||||||||    
T  33687 tttcataagctattatgaagagcttatggaaataagctgaaaacaacttat 33637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 301
Target Start/End: Original strand, 14617 - 14666
Alignment:
Q  252 tattttcataaactatcatggagagtttatgaaaataagctgaaaacaac 301  Q
    |||||| ||||| |||| || ||||||||| |||||||||||||||||||    
T  14617 tatttttataaaatatcttgaagagtttataaaaataagctgaaaacaac 14666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 339
Target Start/End: Original strand, 306335 - 306420
Alignment:
Q  254 ttttcataaactatcatggagagtttatgaaaataagctgaaaacaacttatgcgcatgacatagattgttttcataagctcactc 339  Q
    ||||||||| ||||| | ||||| ||||| || ||||||||||||| |||||| ||||| ||||   ||||| ||||||| |||||    
T  306335 ttttcataagctatcctagagagcttatgtaagtaagctgaaaacagcttatgggcatgtcataagctgtttccataagcgcactc 306420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 221 - 289
Target Start/End: Complemental strand, 21379 - 21311
Alignment:
Q  221 taaaattaagttaaattgtttccgtatgaactattttcataaactatcatggagagtttatgaaaataa 289  Q
    |||||| |||||||||||||| ||||| | || ||||||||| ||||  ||||||  ||||||||||||    
T  21379 taaaataaagttaaattgttttcgtataagctgttttcataagctatattggagaaattatgaaaataa 21311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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