View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3383_high_5 (Length: 250)

Name: NF3383_high_5
Description: NF3383
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3383_high_5
NF3383_high_5
[»] chr1 (41 HSPs)
chr1 (4-238)||(28030827-28031064)
chr1 (124-231)||(6766374-6766481)
chr1 (124-231)||(16120593-16120700)
chr1 (124-231)||(36757639-36757746)
chr1 (133-244)||(38153417-38153528)
chr1 (124-231)||(6402563-6402670)
chr1 (124-231)||(11641220-11641327)
chr1 (124-231)||(17305956-17306063)
chr1 (124-231)||(30003535-30003642)
chr1 (124-231)||(42735318-42735428)
chr1 (124-231)||(52024028-52024135)
chr1 (122-231)||(27292640-27292749)
chr1 (124-229)||(44644510-44644615)
chr1 (132-231)||(48526837-48526936)
chr1 (124-231)||(9342798-9342905)
chr1 (124-231)||(36399100-36399207)
chr1 (124-231)||(40771925-40772032)
chr1 (124-231)||(44647866-44647973)
chr1 (124-238)||(24321261-24321377)
chr1 (124-231)||(30701720-30701827)
chr1 (129-231)||(4302125-4302227)
chr1 (129-231)||(40977641-40977743)
chr1 (137-229)||(26910091-26910183)
chr1 (124-231)||(42788695-42788802)
chr1 (132-231)||(19711845-19711940)
chr1 (124-231)||(30385298-30385405)
chr1 (129-230)||(25695404-25695508)
chr1 (132-231)||(3485360-3485459)
chr1 (124-231)||(31444925-31445032)
chr1 (133-231)||(40800540-40800638)
chr1 (129-231)||(15382579-15382681)
chr1 (129-231)||(34634914-34635016)
chr1 (180-225)||(7568645-7568690)
chr1 (138-231)||(48375018-48375111)
chr1 (130-224)||(50972794-50972892)
chr1 (135-199)||(15912521-15912585)
chr1 (124-231)||(27984558-27984664)
chr1 (158-220)||(52163615-52163677)
chr1 (167-244)||(9881321-9881398)
chr1 (138-215)||(16689840-16689917)
chr1 (195-231)||(22575740-22575776)
[»] chr4 (51 HSPs)
chr4 (124-244)||(36523108-36523228)
chr4 (124-231)||(43967725-43967832)
chr4 (124-231)||(44232230-44232337)
chr4 (133-228)||(25101731-25101826)
chr4 (124-231)||(38416803-38416910)
chr4 (133-237)||(2571029-2571133)
chr4 (128-231)||(5428584-5428685)
chr4 (124-231)||(39307698-39307805)
chr4 (124-231)||(2760880-2760987)
chr4 (124-231)||(26169988-26170095)
chr4 (124-231)||(29830345-29830452)
chr4 (124-231)||(35381047-35381154)
chr4 (124-231)||(54330843-54330950)
chr4 (124-231)||(55209727-55209834)
chr4 (129-231)||(25296733-25296835)
chr4 (131-231)||(12625260-12625360)
chr4 (129-229)||(55800841-55800941)
chr4 (132-231)||(3036990-3037089)
chr4 (124-231)||(7614617-7614724)
chr4 (129-220)||(34652211-34652302)
chr4 (124-231)||(38721339-38721446)
chr4 (124-230)||(27407773-27407879)
chr4 (124-238)||(37767104-37767218)
chr4 (127-220)||(29051689-29051782)
chr4 (159-231)||(4467672-4467744)
chr4 (129-229)||(55191831-55191931)
chr4 (132-231)||(12240331-12240430)
chr4 (132-231)||(35686383-35686482)
chr4 (132-231)||(38716897-38716995)
chr4 (124-231)||(47386439-47386546)
chr4 (125-231)||(25918206-25918312)
chr4 (132-238)||(31010224-31010330)
chr4 (124-226)||(50205745-50205847)
chr4 (131-231)||(30446307-30446406)
chr4 (124-231)||(17610282-17610389)
chr4 (124-231)||(26125710-26125817)
chr4 (152-231)||(45291862-45291941)
chr4 (132-231)||(19433511-19433614)
chr4 (133-211)||(27755730-27755808)
chr4 (127-228)||(20875403-20875504)
chr4 (124-223)||(23360180-23360276)
chr4 (124-238)||(9029595-9029712)
chr4 (138-228)||(56297858-56297948)
chr4 (129-238)||(30191619-30191723)
chr4 (129-186)||(34323076-34323133)
chr4 (137-228)||(34316536-34316626)
chr4 (151-231)||(19595734-19595814)
chr4 (132-231)||(10550434-10550535)
chr4 (180-230)||(19903804-19903854)
chr4 (129-231)||(50620835-50620937)
chr4 (131-224)||(40682627-40682720)
[»] chr7 (49 HSPs)
chr7 (124-244)||(36341622-36341742)
chr7 (124-231)||(28061668-28061775)
chr7 (124-231)||(36623310-36623417)
chr7 (124-231)||(47156029-47156136)
chr7 (124-238)||(38851993-38852107)
chr7 (124-231)||(41897990-41898097)
chr7 (124-231)||(42890496-42890603)
chr7 (127-231)||(30342079-30342183)
chr7 (124-227)||(8683820-8683923)
chr7 (124-231)||(32431511-32431618)
chr7 (129-231)||(40256064-40256166)
chr7 (127-228)||(27045564-27045665)
chr7 (124-231)||(6766703-6766810)
chr7 (132-231)||(7438913-7439012)
chr7 (124-231)||(7457875-7457981)
chr7 (124-231)||(39130079-39130186)
chr7 (124-231)||(40090071-40090178)
chr7 (129-220)||(42662194-42662284)
chr7 (124-231)||(48602438-48602545)
chr7 (137-231)||(44732027-44732121)
chr7 (124-205)||(46322144-46322225)
chr7 (132-231)||(11502733-11502832)
chr7 (124-231)||(16778507-16778614)
chr7 (124-231)||(20885105-20885212)
chr7 (124-231)||(35117128-35117234)
chr7 (126-220)||(7169130-7169224)
chr7 (127-231)||(4131656-4131760)
chr7 (131-231)||(46479838-46479938)
chr7 (129-231)||(36585116-36585218)
chr7 (124-220)||(2952424-2952521)
chr7 (129-230)||(25566702-25566802)
chr7 (124-231)||(46103523-46103623)
chr7 (127-231)||(5529016-5529120)
chr7 (129-231)||(34750507-34750611)
chr7 (124-231)||(42877388-42877495)
chr7 (125-231)||(6174839-6174945)
chr7 (133-231)||(26161607-26161705)
chr7 (127-238)||(3851082-3851190)
chr7 (124-228)||(47525992-47526097)
chr7 (124-202)||(45331917-45331992)
chr7 (124-224)||(49110630-49110730)
chr7 (136-223)||(16870641-16870728)
chr7 (129-231)||(35570202-35570309)
chr7 (124-231)||(41134641-41134743)
chr7 (180-225)||(3785578-3785623)
chr7 (131-200)||(26980056-26980125)
chr7 (190-231)||(39278484-39278525)
chr7 (180-228)||(37467463-37467511)
chr7 (178-222)||(38767221-38767265)
[»] chr3 (40 HSPs)
chr3 (131-244)||(44561793-44561906)
chr3 (124-231)||(27334884-27334991)
chr3 (124-231)||(13499488-13499595)
chr3 (124-231)||(42490349-42490456)
chr3 (124-231)||(20765198-20765305)
chr3 (124-231)||(21005295-21005402)
chr3 (124-231)||(27010627-27010734)
chr3 (132-231)||(33415809-33415908)
chr3 (124-231)||(39866294-39866401)
chr3 (124-231)||(42761636-42761743)
chr3 (124-205)||(45613575-45613656)
chr3 (124-216)||(19823902-19823994)
chr3 (129-225)||(34912301-34912397)
chr3 (137-231)||(3430427-3430521)
chr3 (129-231)||(21797563-21797665)
chr3 (133-231)||(33803532-33803631)
chr3 (172-231)||(44856396-44856455)
chr3 (124-228)||(41252919-41253023)
chr3 (124-231)||(43181508-43181616)
chr3 (132-231)||(15332959-15333058)
chr3 (129-231)||(25527413-25527513)
chr3 (124-238)||(15568081-15568194)
chr3 (129-235)||(41751559-41751665)
chr3 (129-199)||(42049788-42049858)
chr3 (129-231)||(54507648-54507750)
chr3 (124-192)||(32220865-32220933)
chr3 (163-238)||(17643772-17643847)
chr3 (129-203)||(43467923-43467997)
chr3 (124-237)||(15664092-15664204)
chr3 (129-213)||(22782273-22782357)
chr3 (129-213)||(22786637-22786721)
chr3 (163-231)||(30213845-30213913)
chr3 (124-215)||(37766049-37766145)
chr3 (124-231)||(36227547-36227654)
chr3 (161-227)||(27813445-27813511)
chr3 (130-231)||(6910342-6910443)
chr3 (133-228)||(30057310-30057405)
chr3 (127-168)||(27813817-27813858)
chr3 (178-238)||(33128065-33128125)
chr3 (127-215)||(42469635-42469722)
[»] chr2 (33 HSPs)
chr2 (131-231)||(7799856-7799956)
chr2 (124-231)||(7608051-7608158)
chr2 (122-231)||(5404996-5405105)
chr2 (128-231)||(6223072-6223175)
chr2 (124-231)||(8042175-8042282)
chr2 (124-231)||(19141219-19141326)
chr2 (124-241)||(39358148-39358265)
chr2 (137-231)||(16865069-16865163)
chr2 (124-231)||(2183110-2183217)
chr2 (133-231)||(43444693-43444791)
chr2 (129-231)||(44365164-44365266)
chr2 (132-228)||(11931701-11931797)
chr2 (129-220)||(32774598-32774689)
chr2 (129-231)||(19262687-19262789)
chr2 (124-229)||(9006939-9007044)
chr2 (127-231)||(24251965-24252069)
chr2 (136-231)||(11841746-11841841)
chr2 (129-204)||(13598449-13598523)
chr2 (124-228)||(22839083-22839187)
chr2 (127-231)||(38291957-38292061)
chr2 (133-220)||(33607387-33607474)
chr2 (128-231)||(36072180-36072283)
chr2 (136-225)||(13117483-13117572)
chr2 (127-244)||(24093676-24093794)
chr2 (157-220)||(44644905-44644968)
chr2 (125-231)||(19165936-19166041)
chr2 (133-229)||(42133763-42133859)
chr2 (129-219)||(30548839-30548929)
chr2 (178-231)||(9172299-9172352)
chr2 (127-220)||(31904044-31904137)
chr2 (133-214)||(9553890-9553967)
chr2 (153-220)||(36177741-36177809)
chr2 (124-231)||(44563150-44563258)
[»] chr6 (38 HSPs)
chr6 (124-231)||(6563228-6563335)
chr6 (124-231)||(24624094-24624201)
chr6 (124-231)||(4147933-4148040)
chr6 (129-244)||(4440857-4440972)
chr6 (124-231)||(17257804-17257911)
chr6 (124-231)||(19088111-19088218)
chr6 (124-231)||(32414832-32414939)
chr6 (124-231)||(17213937-17214044)
chr6 (124-231)||(29790208-29790315)
chr6 (129-231)||(15383083-15383185)
chr6 (129-231)||(22054779-22054881)
chr6 (130-231)||(31569179-31569280)
chr6 (124-231)||(18668841-18668948)
chr6 (132-231)||(20226451-20226550)
chr6 (132-231)||(22120435-22120534)
chr6 (124-215)||(25475977-25476068)
chr6 (133-231)||(28477764-28477862)
chr6 (127-231)||(15337493-15337597)
chr6 (124-231)||(32671818-32671925)
chr6 (133-231)||(29693894-29693992)
chr6 (129-205)||(3989442-3989518)
chr6 (131-231)||(17155158-17155258)
chr6 (124-215)||(10520470-10520561)
chr6 (125-231)||(5495252-5495358)
chr6 (129-231)||(31869715-31869817)
chr6 (159-231)||(2360027-2360099)
chr6 (152-231)||(1040854-1040933)
chr6 (131-231)||(14214066-14214166)
chr6 (133-204)||(21540809-21540880)
chr6 (130-231)||(3623863-3623963)
chr6 (177-238)||(12226030-12226091)
chr6 (124-220)||(20437177-20437274)
chr6 (159-231)||(10298726-10298798)
chr6 (151-231)||(24955549-24955629)
chr6 (153-238)||(19240738-19240823)
chr6 (178-231)||(23158062-23158115)
chr6 (166-225)||(3321706-3321766)
chr6 (195-231)||(26567297-26567333)
[»] chr5 (32 HSPs)
chr5 (124-230)||(38916404-38916510)
chr5 (124-231)||(978079-978186)
chr5 (124-231)||(8086183-8086290)
chr5 (129-231)||(14634310-14634412)
chr5 (124-231)||(9502780-9502887)
chr5 (124-231)||(18094234-18094341)
chr5 (124-231)||(33387222-33387329)
chr5 (131-231)||(3472430-3472530)
chr5 (124-231)||(12007785-12007892)
chr5 (124-198)||(18598546-18598620)
chr5 (132-237)||(27579577-27579681)
chr5 (124-231)||(33587622-33587729)
chr5 (133-231)||(39776641-39776739)
chr5 (153-235)||(11251145-11251227)
chr5 (129-231)||(34111969-34112071)
chr5 (131-231)||(30355027-30355127)
chr5 (132-231)||(7224175-7224274)
chr5 (133-215)||(11785895-11785977)
chr5 (129-231)||(32017220-32017322)
chr5 (138-231)||(12456793-12456886)
chr5 (124-228)||(24992294-24992398)
chr5 (124-231)||(40156200-40156307)
chr5 (153-231)||(6996012-6996089)
chr5 (179-228)||(26387035-26387084)
chr5 (124-188)||(10696792-10696856)
chr5 (125-220)||(5947715-5947810)
chr5 (124-228)||(24916402-24916508)
chr5 (168-231)||(3422363-3422429)
chr5 (132-231)||(20692544-20692641)
chr5 (124-186)||(9050763-9050825)
chr5 (141-231)||(18998706-18998796)
chr5 (178-224)||(31197850-31197896)
[»] chr8 (31 HSPs)
chr8 (124-231)||(616785-616892)
chr8 (124-231)||(623178-623285)
chr8 (129-231)||(2766201-2766303)
chr8 (124-231)||(18044427-18044534)
chr8 (124-231)||(42587401-42587508)
chr8 (129-231)||(3100648-3100750)
chr8 (118-231)||(36642011-36642125)
chr8 (129-231)||(40494391-40494493)
chr8 (133-229)||(13216876-13216972)
chr8 (124-220)||(24524102-24524198)
chr8 (124-214)||(6414135-6414225)
chr8 (129-231)||(14237287-14237389)
chr8 (129-231)||(32998457-32998559)
chr8 (124-237)||(5878319-5878431)
chr8 (127-231)||(38957175-38957279)
chr8 (125-225)||(22489433-22489533)
chr8 (127-215)||(35403521-35403609)
chr8 (124-228)||(36167078-36167182)
chr8 (133-231)||(41263821-41263919)
chr8 (137-238)||(3370402-3370503)
chr8 (131-228)||(18090338-18090434)
chr8 (124-231)||(132019-132126)
chr8 (129-231)||(4270245-4270347)
chr8 (124-205)||(8394348-8394429)
chr8 (124-225)||(33700232-33700334)
chr8 (133-231)||(18035111-18035209)
chr8 (130-231)||(5173259-5173360)
chr8 (168-231)||(32780081-32780144)
chr8 (124-186)||(13217219-13217281)
chr8 (151-231)||(11637811-11637891)
chr8 (122-186)||(38497083-38497147)
[»] scaffold0295 (2 HSPs)
scaffold0295 (124-231)||(13870-13977)
scaffold0295 (124-183)||(9374-9433)
[»] scaffold0022 (1 HSPs)
scaffold0022 (124-231)||(100800-100907)
[»] scaffold0003 (1 HSPs)
scaffold0003 (124-231)||(161990-162097)
[»] scaffold0225 (1 HSPs)
scaffold0225 (127-231)||(8986-9090)
[»] scaffold0029 (1 HSPs)
scaffold0029 (127-231)||(138183-138287)
[»] scaffold0018 (1 HSPs)
scaffold0018 (131-231)||(67922-68022)
[»] scaffold0262 (1 HSPs)
scaffold0262 (127-231)||(22785-22889)
[»] scaffold0595 (1 HSPs)
scaffold0595 (138-231)||(3964-4057)
[»] scaffold0056 (1 HSPs)
scaffold0056 (124-228)||(70963-71066)
[»] scaffold0009 (1 HSPs)
scaffold0009 (129-228)||(217031-217131)


Alignment Details
Target: chr1 (Bit Score: 167; Significance: 1e-89; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 4 - 238
Target Start/End: Complemental strand, 28031064 - 28030827
Alignment:
Q  4 gatccagccactcttgatctactagtggcacacca---tagtcgnnnnnnnctaatttgcatgcagatctttgtcctggtagctatcatcatattctcgg 100  Q
    |||||||||||||||||||||||||||||||||||   ||||||       |||||||||||||||||||||||||||||||||||||||||||||||||    
T  28031064 gatccagccactcttgatctactagtggcacaccaccatagtcgaaacaaactaatttgcatgcagatctttgtcctggtagctatcatcatattctcgg 28030965  T
Q  101 ccatcgataccaagaaaaagctgctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatacttttta 200  Q
    ||| |||||  ||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||    
T  28030964 ccaccgataataagaaaaagttgctccatacgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttattttgaccatacttttta 28030865  T
Q  201 actaacatataaatataaatgttagcatgtacgatatt 238  Q
    ||||||||||||||| ||||||||||||||| ||||||    
T  28030864 actaacatataaatacaaatgttagcatgtaagatatt 28030827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 124 - 231
Target Start/End: Original strand, 6766374 - 6766481
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 223  Q
    |||| ||||||||||||||||||||  |||||||||||||||| |||| || |||||||||||||| ||||||||||||||| ||||||||| |||| ||    
T  6766374 ctccctccgtttcaaaatacatgttcaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatatt 6766473  T
Q  224 agcatgta 231  Q
    ||||||||    
T  6766474 agcatgta 6766481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 124 - 231
Target Start/End: Complemental strand, 16120700 - 16120593
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 223  Q
    |||| |||||||||||||||||||   ||||||||||||||||||||| || |||||||||||||| |||||||||||||||  |||||||| |||| ||    
T  16120700 ctccctccgtttcaaaatacatgtccaatttttgcaatgtgcattattcacttgacttactttgaccatactttttaactaatgtataaatacaaatatt 16120601  T
Q  224 agcatgta 231  Q
    ||||||||    
T  16120600 agcatgta 16120593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 124 - 231
Target Start/End: Complemental strand, 36757746 - 36757639
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 223  Q
    |||||||| |||||||||||||||   |||||||||||||||| |||| || |||||||||||||| ||||||||||||||| ||||||||| |||| ||    
T  36757746 ctccatccatttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatatt 36757647  T
Q  224 agcatgta 231  Q
    ||||||||    
T  36757646 agcatgta 36757639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 133 - 244
Target Start/End: Complemental strand, 38153528 - 38153417
Alignment:
Q  133 tttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatgtac 232  Q
    ||||||||||||||| ||||||||  |||||||| |||| |||||||||||| | || ||||||||||||||||||||||||| |||||||| ||||||     
T  38153528 tttcaaaatacatgtcgcatttttataatgtgcactattcacatgacttactgttaccatactttttaactaacatataaatacaaatgttatcatgtaa 38153429  T
Q  233 gatattcttcga 244  Q
    ||| ||||||||    
T  38153428 gatgttcttcga 38153417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 124 - 231
Target Start/End: Complemental strand, 6402670 - 6402563
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 223  Q
    |||| |||||||||||||||||||   |||||||||||||||| |||| || ||||||| |||||| ||||||||||||||| ||||||||| |||| ||    
T  6402670 ctccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttattttgaccatactttttaactaatatataaatacaaatatt 6402571  T
Q  224 agcatgta 231  Q
    ||||||||    
T  6402570 agcatgta 6402563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 124 - 231
Target Start/End: Complemental strand, 11641327 - 11641220
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 223  Q
    |||| ||| |||||||||||||||   |||||||||||||||| |||| || |||||||||||||| ||||||||||||||| ||||||||| |||| ||    
T  11641327 ctccctccatttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatatt 11641228  T
Q  224 agcatgta 231  Q
    ||||||||    
T  11641227 agcatgta 11641220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 124 - 231
Target Start/End: Original strand, 17305956 - 17306063
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 223  Q
    |||| ||||||| |||||||||||   |||||||||||||||| |||| || |||||||||||||||||||||||||| ||| ||||||||| |||| ||    
T  17305956 ctccctccgttttaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgactatactttttaattaatatataaatacaaatatt 17306055  T
Q  224 agcatgta 231  Q
    ||||||||    
T  17306056 agcatgta 17306063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 124 - 231
Target Start/End: Original strand, 30003535 - 30003642
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 223  Q
    ||||||||||||||||||||||||   ||||||| |||||||| |||| || |||||||||||||| |||||||||||||||  |||||||| |||| ||    
T  30003535 ctccatccgtttcaaaatacatgtccaatttttgtaatgtgcactattcacttgacttactttgaccatactttttaactaatgtataaatacaaatatt 30003634  T
Q  224 agcatgta 231  Q
    ||||||||    
T  30003635 agcatgta 30003642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 124 - 231
Target Start/End: Complemental strand, 42735428 - 42735318
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatac---tttttaactaacatataaatataaat 220  Q
    |||||||||||||||||||||||||  ||| |||||||||||| |||| || |||||||||||||| ||||   ||||||||||| ||||||||| ||||    
T  42735428 ctccatccgtttcaaaatacatgttcaattattgcaatgtgcactattcacttgacttactttgaccatacttttttttaactaatatataaatacaaat 42735329  T
Q  221 gttagcatgta 231  Q
     ||||||||||    
T  42735328 attagcatgta 42735318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 124 - 231
Target Start/End: Original strand, 52024028 - 52024135
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 223  Q
    |||| ||||||||||||||||||||  |||||||||||||||| |||| || | |||||||||||| ||| |||||||||||  ||||||||||||| ||    
T  52024028 ctccctccgtttcaaaatacatgttcaatttttgcaatgtgcactattcacttcacttactttgaccataatttttaactaatgtataaatataaatatt 52024127  T
Q  224 agcatgta 231  Q
    ||| ||||    
T  52024128 agcgtgta 52024135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 122 - 231
Target Start/End: Original strand, 27292640 - 27292749
Alignment:
Q  122 tgctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatg 221  Q
    |||||| |||||||||||||| ||||   ||||||||||| |||| |||| || ||| ||||||||||||||||||||||||||  |||||||| ||||     
T  27292640 tgctccctccgtttcaaaatatatgtccaatttttgcaatctgcactattcacttgatttactttgactatactttttaactaaagtataaatacaaata 27292739  T
Q  222 ttagcatgta 231  Q
    ||||||||||    
T  27292740 ttagcatgta 27292749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 124 - 229
Target Start/End: Complemental strand, 44644615 - 44644510
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 223  Q
    |||| ||| ||| ||||||||||| |||||||| ||||||| |||||| ||||||||||||||||  ||| |||||||| || ||||||||| |||||||    
T  44644615 ctccctccattttaaaatacatgtcgcattttttcaatgtgtattattcacatgacttactttgatcatattttttaacaaatatataaatacaaatgtt 44644516  T
Q  224 agcatg 229  Q
    ||||||    
T  44644515 agcatg 44644510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 132 - 231
Target Start/End: Complemental strand, 48526936 - 48526837
Alignment:
Q  132 gtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaaca-tataaatataaatgttagcatgt 230  Q
    ||||||||||| || ||||||||||||||||| |||||||||||||| |||||||||| ||| ||||||| ||| | |||||||||||||||||| ||||    
T  48526936 gtttcaaaatagatattgcatttttgcaatgtacattatttacatgatttactttgaccata-tttttaattaatattataaatataaatgttagtatgt 48526838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 124 - 231
Target Start/End: Complemental strand, 9342905 - 9342798
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 223  Q
    ||||||||||||||||| ||||||   ||||||||||||||| ||||| || |||||||||||||  ||| |||||||||||  |||||||| |||| ||    
T  9342905 ctccatccgtttcaaaaaacatgtctaatttttgcaatgtgcgttattcacttgacttactttgatcatattttttaactaatgtataaatacaaatatt 9342806  T
Q  224 agcatgta 231  Q
    ||||||||    
T  9342805 agcatgta 9342798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 124 - 231
Target Start/End: Original strand, 36399100 - 36399207
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 223  Q
    ||||||||||||||||||||||||   |||||||||||||||| |||| || | |||||||||||| ||| |||||||||||  |||||||| |||| ||    
T  36399100 ctccatccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttcacttactttgaccataatttttaactaatgtataaatacaaatatt 36399199  T
Q  224 agcatgta 231  Q
    ||| ||||    
T  36399200 agcgtgta 36399207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 124 - 231
Target Start/End: Complemental strand, 40772032 - 40771925
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 223  Q
    |||| |||||||||||||||||||   |||||| ||||||||| |||| || ||| |||||||||| |||||||||||||||  |||||||| |||| ||    
T  40772032 ctccctccgtttcaaaatacatgtccaatttttacaatgtgcactattcacttgatttactttgaccatactttttaactaatgtataaatacaaatatt 40771933  T
Q  224 agcatgta 231  Q
    ||||||||    
T  40771932 agcatgta 40771925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 124 - 231
Target Start/End: Complemental strand, 44647973 - 44647866
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 223  Q
    |||| ||| ||| ||||||||||| |||||||| ||||||| |||||| |||||||||| |||||  ||| |||||||| || ||||||||| |||||||    
T  44647973 ctccctccattttaaaatacatgtcgcattttttcaatgtgtattattcacatgacttattttgatcatattttttaacaaatatataaatacaaatgtt 44647874  T
Q  224 agcatgta 231  Q
    ||||||||    
T  44647873 agcatgta 44647866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 124 - 238
Target Start/End: Original strand, 24321261 - 24321377
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgac--tatactttttaactaacatataaatataaatg 221  Q
    |||| ||||||| ||||||||||| | |||||||||||||||| |||| || ||| ||||||||||  |||| |||||||||||  |||||||| ||||     
T  24321261 ctccctccgttttaaaatacatgtcgaatttttgcaatgtgcactattcacttgatttactttgaccatataatttttaactaatgtataaatacaaata 24321360  T
Q  222 ttagcatgtacgatatt 238  Q
    |||||||||| ||||||    
T  24321361 ttagcatgtaagatatt 24321377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 124 - 231
Target Start/End: Original strand, 30701720 - 30701827
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 223  Q
    |||| |||||||||||||||||||   ||||||| |||||||| |||| || |||||||||||||| ||| |||||||||||  |||||||| |||| ||    
T  30701720 ctccctccgtttcaaaatacatgtccaatttttgtaatgtgcactattcacttgacttactttgaccataatttttaactaatgtataaatacaaatatt 30701819  T
Q  224 agcatgta 231  Q
    ||| ||||    
T  30701820 agcgtgta 30701827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 129 - 231
Target Start/End: Original strand, 4302125 - 4302227
Alignment:
Q  129 tccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcat 228  Q
    ||||||| | ||||||||||  ||||||||||||| || ||||||| |||||||||||||  ||  |||||||||||  ||||||||||||| |||||||    
T  4302125 tccgttttataatacatgttcaatttttgcaatgtacactatttacttgacttactttgataatgttttttaactaatgtataaatataaatattagcat 4302224  T
Q  229 gta 231  Q
    |||    
T  4302225 gta 4302227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 129 - 231
Target Start/End: Complemental strand, 40977743 - 40977641
Alignment:
Q  129 tccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcat 228  Q
    |||||| ||||||||||||   |||||||||||||| | |||| || ||||| |||||||| |||||||||||||||  |||||||| |||| |||||||    
T  40977743 tccgttgcaaaatacatgtccaatttttgcaatgtgtactattcacttgactaactttgaccatactttttaactaatgtataaatacaaatattagcat 40977644  T
Q  229 gta 231  Q
    |||    
T  40977643 gta 40977641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 137 - 229
Target Start/End: Original strand, 26910091 - 26910183
Alignment:
Q  137 aaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatg 229  Q
    |||||||||||   |||||||||||||||| |||| || |||||||||||||| |||||||||||||||  |||||||| |||| ||| ||||    
T  26910091 aaaatacatgtataatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattaacatg 26910183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 124 - 231
Target Start/End: Complemental strand, 42788802 - 42788695
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 223  Q
    |||| ||| |||||||||| ||||   ||||||| |||||||| |||| || |||||||||||||| |||||||||||||||  |||||||| |||| ||    
T  42788802 ctccctccatttcaaaatatatgtccaatttttgtaatgtgcactattcacttgacttactttgaccatactttttaactaatgtataaatacaaatatt 42788703  T
Q  224 agcatgta 231  Q
     |||||||    
T  42788702 tgcatgta 42788695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 132 - 231
Target Start/End: Complemental strand, 19711940 - 19711845
Alignment:
Q  132 gtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatgta 231  Q
    |||||||||||||| | |||||||||||| ||||| ||||||| ||||||    | |||||| ||||||||||||||||||||| || || |||||||||    
T  19711940 gtttcaaaatacatatcgcatttttgcaacgtgcactatttacgtgactt----taactatattttttaactaacatataaatacaagtgatagcatgta 19711845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 124 - 231
Target Start/End: Complemental strand, 30385405 - 30385298
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 223  Q
    |||||||  ||| ||||||||||| ||| ||||  |||||||| |||| ||||   |||||||||| ||| ||||||||||| ||||||||| |||||||    
T  30385405 ctccatctattttaaaatacatgtcgcaattttataatgtgcactattcacatagtttactttgaccatattttttaactaatatataaatacaaatgtt 30385306  T
Q  224 agcatgta 231  Q
    || |||||    
T  30385305 agtatgta 30385298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 129 - 230
Target Start/End: Original strand, 25695404 - 25695508
Alignment:
Q  129 tccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactata---ctttttaactaacatataaatataaatgttag 225  Q
    |||||||||||||| || |  |||||||||||||||||||| | | || |||| | ||||| |||    ||||||||||| |||||||||||||||||||    
T  25695404 tccgtttcaaaataaatttcacatttttgcaatgtgcattaatcatatcacttgcgttgaccatatttttttttaactaatatataaatataaatgttag 25695503  T
Q  226 catgt 230  Q
    |||||    
T  25695504 catgt 25695508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 132 - 231
Target Start/End: Complemental strand, 3485459 - 3485360
Alignment:
Q  132 gtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatgta 231  Q
    |||| ||||||||||| | | |||| |||| |||| ||||  ||| |||||||||||  ||| ||||||||||| ||||||||| |||||||| ||||||    
T  3485459 gttttaaaatacatgtcgtaattttacaatatgcactattcgcataacttactttgatcatattttttaactaatatataaatacaaatgttatcatgta 3485360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 124 - 231
Target Start/End: Original strand, 31444925 - 31445032
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 223  Q
    ||||| |||||| |||||||||||  || |||| || |||||||||||| |||  | ||| ||||| ||| ||||||||||| ||||||| | |||||||    
T  31444925 ctccaaccgttttaaaatacatgtcacaattttacactgtgcattatttgcatagcgtaccttgaccatattttttaactaatatataaacacaaatgtt 31445024  T
Q  224 agcatgta 231  Q
     |||||||    
T  31445025 tgcatgta 31445032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 231
Target Start/End: Complemental strand, 40800638 - 40800540
Alignment:
Q  133 tttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactata-ctttttaactaacatataaatataaatgttagcatgta 231  Q
    |||||||||| |||| | | |||| |||||||||||| | |||| |||||||||||| |||  ||||||||||| |||| |||| |||||||||||||||    
T  40800638 tttcaaaatatatgtcgtaattttacaatgtgcattaatcacataacttactttgaccatatttttttaactaatatat-aatacaaatgttagcatgta 40800540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 129 - 231
Target Start/End: Complemental strand, 15382681 - 15382579
Alignment:
Q  129 tccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcat 228  Q
    ||||||||||||||||||| ||| |||| |||||| || |||| |||| ||||||| |||| |   ||||||| ||| ||||||||| |||| |||| ||    
T  15382681 tccgtttcaaaatacatgtcgcaattttacaatgtacactattcacataacttactctgaccaatttttttaaataatatataaatacaaatattagtat 15382582  T
Q  229 gta 231  Q
    |||    
T  15382581 gta 15382579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 129 - 231
Target Start/End: Original strand, 34634914 - 34635016
Alignment:
Q  129 tccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcat 228  Q
    |||||||| ||||| |||| |||  ||||||||||| | | || |||| ||||| |||||  ||| ||||||||||| ||||||||| |||||||| |||    
T  34634914 tccgtttctaaataaatgtcgcaactttgcaatgtgaagttttcacataacttattttgataatattttttaactaatatataaatacaaatgttaacat 34635013  T
Q  229 gta 231  Q
    |||    
T  34635014 gta 34635016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 225
Target Start/End: Complemental strand, 7568690 - 7568645
Alignment:
Q  180 ttactttgactatactttttaactaacatataaatataaatgttag 225  Q
    ||||||| ||| |||||||||||||| |||||||||||||||||||    
T  7568690 ttactttaactctactttttaactaatatataaatataaatgttag 7568645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 231
Target Start/End: Original strand, 48375018 - 48375111
Alignment:
Q  138 aaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatgta 231  Q
    ||||| |||||  ||||||||||||| ||||||| || | ||||| |||||  ||| |||||||||||  |||||||| |||| ||||||||||    
T  48375018 aaatatatgttcaatttttgcaatgtacattattcacttaacttattttgatcatattttttaactaatttataaatacaaatattagcatgta 48375111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 130 - 224
Target Start/End: Complemental strand, 50972892 - 50972794
Alignment:
Q  130 ccgtttcaaaatacatgttgcatttttgcaatgtgcattatttaca----tgacttactttgactatactttttaactaacatataaatataaatgtta 224  Q
    |||||||||| |||||||  |||||||||||| |||| || | |||    |||||||||||||  ||||||||||| ||| ||||||||| ||||||||    
T  50972892 ccgtttcaaattacatgtcacatttttgcaatttgcactaatcacatgactgacttactttgaacatactttttaaataatatataaatacaaatgtta 50972794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 199
Target Start/End: Complemental strand, 15912585 - 15912521
Alignment:
Q  135 tcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatacttttt 199  Q
    |||||||||||||   |||||| ||||||||| |||| || |||||||||||||| |||||||||    
T  15912585 tcaaaatacatgtccaatttttacaatgtgcactattcacttgacttactttgaccatacttttt 15912521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 124 - 231
Target Start/End: Original strand, 27984558 - 27984664
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 223  Q
    |||||||||||| |||||||||||  || |||| |||  |||| |||| ||||  ||||||||||| ||| ||||||||||| |||  |||| |||||||    
T  27984558 ctccatccgttttaaaatacatgtcacaattttacaacatgcactattcacattgcttactttgaccata-tttttaactaatatacgaatacaaatgtt 27984656  T
Q  224 agcatgta 231  Q
    ||| ||||    
T  27984657 agcttgta 27984664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 220
Target Start/End: Complemental strand, 52163677 - 52163615
Alignment:
Q  158 caatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaat 220  Q
    ||||||||||| || ||||||| ||||||||  ||| ||||| ||||| ||||||||||||||    
T  52163677 caatgtgcattgttgacatgacatactttgatcatatttttttactaatatataaatataaat 52163615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 244
Target Start/End: Original strand, 9881321 - 9881398
Alignment:
Q  167 ttatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatgtacgatattcttcga 244  Q
    ||||| |||| ||||| ||| || ||| ||||||||||| ||||| |||||||||||| |||||| ||| || |||||    
T  9881321 ttattcacataacttattttaaccataatttttaactaatatatacatataaatgttatcatgtaagatgttgttcga 9881398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 215
Target Start/End: Original strand, 16689840 - 16689917
Alignment:
Q  138 aaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaata 215  Q
    |||||||||| ||| |||| | ||||||| |||| |||| |||||||||||  ||| ||| ||||||| |||||||||    
T  16689840 aaatacatgtagcaattttacgatgtgcactattcacataacttactttgatcatattttctaactaatatataaata 16689917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 231
Target Start/End: Complemental strand, 22575776 - 22575740
Alignment:
Q  195 tttttaactaacatataaatataaatgttagcatgta 231  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  22575776 tttttaactaatatataaatacaaatgttagcatgta 22575740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 81; Significance: 3e-38; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 124 - 244
Target Start/End: Complemental strand, 36523228 - 36523108
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 223  Q
    ||||||||||||||||||| |||| ||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  36523228 ctccatccgtttcaaaatatatgtcgcatttttgcaatatgcactatttacatgacttactttgactatactttttaactaatatataaatacaaatgtt 36523129  T
Q  224 agcatgtacgatattcttcga 244  Q
    | |||||| ||| || |||||    
T  36523128 aacatgtaagatgttgttcga 36523108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 124 - 231
Target Start/End: Original strand, 43967725 - 43967832
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 223  Q
    |||| ||||||||||||||||||||  |||||||||||||||| |||| || |||||||||||||| ||||||||||||||| ||||||||| |||| ||    
T  43967725 ctccttccgtttcaaaatacatgttcaatttttgcaatgtgcactattaacttgacttactttgaccatactttttaactaatatataaatacaaatatt 43967824  T
Q  224 agcatgta 231  Q
    ||||||||    
T  43967825 agcatgta 43967832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 124 - 231
Target Start/End: Complemental strand, 44232337 - 44232230
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 223  Q
    ||||||||||||||||||||||||   |||||||||||||||| |||| || |||||||||||||| ||||||||||||||| ||||||||| |||| ||    
T  44232337 ctccatccgtttcaaaatacatgtctaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatatt 44232238  T
Q  224 agcatgta 231  Q
    ||||||||    
T  44232237 agcatgta 44232230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 133 - 228
Target Start/End: Original strand, 25101731 - 25101826
Alignment:
Q  133 tttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcat 228  Q
    |||||||||||||||||||||||||||||||| |||||||| |||| ||| |||||| ||||||||||||||||||||||||  |||| |||||||    
T  25101731 tttcaaaatacatgttgcatttttgcaatgtgtattatttatatgatttattttgaccatactttttaactaacatataaattcaaatattagcat 25101826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 124 - 231
Target Start/End: Complemental strand, 38416910 - 38416803
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 223  Q
    |||| |||||||||||||||||||   |||||||||||||||| |||| || |||||||||||||| ||||||||||||||| ||||||||| |||| ||    
T  38416910 ctccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatatt 38416811  T
Q  224 agcatgta 231  Q
    ||||||||    
T  38416810 agcatgta 38416803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 133 - 237
Target Start/End: Complemental strand, 2571133 - 2571029
Alignment:
Q  133 tttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatgtac 232  Q
    |||||||||||||||  |||||||  ||||||||||||| |||||| ||| |||||||||| ||||||||||| ||||||||| |||||||||||||||     
T  2571133 tttcaaaatacatgtcacatttttataatgtgcattattcacatgatttattttgactatattttttaactaatatataaatacaaatgttagcatgtaa 2571034  T
Q  233 gatat 237  Q
    |||||    
T  2571033 gatat 2571029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 128 - 231
Target Start/End: Original strand, 5428584 - 5428685
Alignment:
Q  128 atccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagca 227  Q
    |||||||||||||||||||| ||||||| |||||||||| |||| ||||||||||| ||||| ||||||||||||||||  ||||||||||||| || ||    
T  5428584 atccgtttcaaaatacatgtcgcattttggcaatgtgcactattcacatgacttacgttgaccatactttttaactaac--ataaatataaatgctatca 5428681  T
Q  228 tgta 231  Q
    ||||    
T  5428682 tgta 5428685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 124 - 231
Target Start/End: Original strand, 39307698 - 39307805
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 223  Q
    |||||||||||||||||||||||| ||||||||||||| | |  |||| ||||||||||||||||   |||||||||||||| ||||||||| |||||||    
T  39307698 ctccatccgtttcaaaatacatgtcgcatttttgcaatataccctattcacatgacttactttgatgctactttttaactaatatataaatacaaatgtt 39307797  T
Q  224 agcatgta 231  Q
    || |||||    
T  39307798 agtatgta 39307805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 124 - 231
Target Start/End: Complemental strand, 2760987 - 2760880
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 223  Q
    |||| |||||||||||||||||||   |||||| ||||||||| |||| || |||||||||||||| ||| ||||||||||| ||||||||| |||| ||    
T  2760987 ctccctccgtttcaaaatacatgtccaatttttacaatgtgcactattcacttgacttactttgaccatattttttaactaatatataaatacaaatatt 2760888  T
Q  224 agcatgta 231  Q
    ||||||||    
T  2760887 agcatgta 2760880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 124 - 231
Target Start/End: Original strand, 26169988 - 26170095
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 223  Q
    |||| |||||||||||||||||||   |||||||||||||||| |||| || ||| |||||||||| |||||||||||||||  |||||||| |||| ||    
T  26169988 ctccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgaccatactttttaactaatgtataaatacaaatatt 26170087  T
Q  224 agcatgta 231  Q
    ||||||||    
T  26170088 agcatgta 26170095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 124 - 231
Target Start/End: Original strand, 29830345 - 29830452
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 223  Q
    |||| |||||||||||||||||||   ||||||  |||||||| |||| || |||||||||||||| ||||||||||||||| ||||||||| |||| ||    
T  29830345 ctccctccgtttcaaaatacatgtccaatttttttaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatatt 29830444  T
Q  224 agcatgta 231  Q
    ||||||||    
T  29830445 agcatgta 29830452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 124 - 231
Target Start/End: Complemental strand, 35381154 - 35381047
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 223  Q
    |||| |||||||||||||||||||   |||||| ||||||||| |||| |  |||||||||||||| ||||||||||||||| ||||||||| |||| ||    
T  35381154 ctccctccgtttcaaaatacatgtccaatttttacaatgtgcactattcatttgacttactttgaccatactttttaactaatatataaatacaaatatt 35381055  T
Q  224 agcatgta 231  Q
    ||||||||    
T  35381054 agcatgta 35381047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 124 - 231
Target Start/End: Complemental strand, 54330950 - 54330843
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 223  Q
    |||| |||||||| ||||||||||   |||||||||||||||  |||| || |||||||||||||| ||||||||||||||| ||||||||| |||| ||    
T  54330950 ctccctccgtttcgaaatacatgtccaatttttgcaatgtgcgctattcacttgacttactttgaccatactttttaactaatatataaatacaaatatt 54330851  T
Q  224 agcatgta 231  Q
    ||||||||    
T  54330850 agcatgta 54330843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 124 - 231
Target Start/End: Complemental strand, 55209834 - 55209727
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 223  Q
    |||| |||||||||||||||||||   |||||| ||||||||| |||| || ||| |||||||||| ||||||||||||||| ||||||||| |||| ||    
T  55209834 ctccctccgtttcaaaatacatgtccaatttttccaatgtgcactattcacttgatttactttgaccatactttttaactaatatataaatacaaatatt 55209735  T
Q  224 agcatgta 231  Q
    ||||||||    
T  55209734 agcatgta 55209727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 129 - 231
Target Start/End: Complemental strand, 25296835 - 25296733
Alignment:
Q  129 tccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcat 228  Q
    ||||||||||||||||| |   |||||||||||||||| |||| || |||||||||||||| |||||||||||||||  |||||||| |||| |||||||    
T  25296835 tccgtttcaaaatacatatctaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcat 25296736  T
Q  229 gta 231  Q
    |||    
T  25296735 gta 25296733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 131 - 231
Target Start/End: Original strand, 12625260 - 12625360
Alignment:
Q  131 cgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatgt 230  Q
    ||||||||||||||||||  ||||||||||| |||| |||| |  |||||||||||||| |||||||||||||||  |||||||| |||| |||||||||    
T  12625260 cgtttcaaaatacatgttcaatttttgcaatatgcactattcatctgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgt 12625359  T
Q  231 a 231  Q
    |    
T  12625360 a 12625360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 129 - 229
Target Start/End: Original strand, 55800841 - 55800941
Alignment:
Q  129 tccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcat 228  Q
    |||||||||| |||||| ||  |||||||||||||||| |||| || |||||||||||||| |||||||||||||||  |||||||| |||| |||||||    
T  55800841 tccgtttcaatatacatcttcaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcat 55800940  T
Q  229 g 229  Q
    |    
T  55800941 g 55800941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 132 - 231
Target Start/End: Original strand, 3036990 - 3037089
Alignment:
Q  132 gtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatgta 231  Q
    |||||||||||||||| | | || | ||||||| | |||| ||||||||||||||||| ||||||||||||||| ||||||||| |||| ||||||||||    
T  3036990 gtttcaaaatacatgtcgtaattatacaatgtgtactattcacatgacttactttgaccatactttttaactaatatataaatacaaatattagcatgta 3037089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 124 - 231
Target Start/End: Original strand, 7614617 - 7614724
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 223  Q
    |||||||||||||||||||||||| | | |||| |||| |  |||| | |||||||||| |||||| ||| ||||||||||| ||||||||| |||||||    
T  7614617 ctccatccgtttcaaaatacatgtcgtaattttacaatatatattaatcacatgacttattttgaccatattttttaactaatatataaatacaaatgtt 7614716  T
Q  224 agcatgta 231  Q
    ||||||||    
T  7614717 agcatgta 7614724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 129 - 220
Target Start/End: Complemental strand, 34652302 - 34652211
Alignment:
Q  129 tccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaat 220  Q
    |||||||||||||||||||  |||||||| |||||| | |||||||| ||||||||| ||| ||| ||||||||||||||||||||| ||||    
T  34652302 tccgtttcaaaatacatgtcacatttttgtaatgtgtactatttacacgacttacttcgaccatattttttaactaacatataaatacaaat 34652211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 124 - 231
Target Start/End: Original strand, 38721339 - 38721446
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 223  Q
    |||| ||| ||| ||||||||||| |||||||| ||||||| |||||| |||||||||| |||||  ||| |||||||| || ||||||||| |||||||    
T  38721339 ctccctccattttaaaatacatgtcgcattttttcaatgtgtattattcacatgacttattttgatcatattttttaacaaatatataaatacaaatgtt 38721438  T
Q  224 agcatgta 231  Q
    ||||||||    
T  38721439 agcatgta 38721446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 124 - 230
Target Start/End: Complemental strand, 27407879 - 27407773
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 223  Q
    |||| ||| ||||||||||||||  ||||||||||| |||| | |||| |||| ||||||||||||  |||||||||||||| ||||||||| |||| ||    
T  27407879 ctccctccatttcaaaatacatgacgcatttttgcagtgtgaactattcacataacttactttgaccctactttttaactaatatataaatacaaatatt 27407780  T
Q  224 agcatgt 230  Q
    |||||||    
T  27407779 agcatgt 27407773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 124 - 238
Target Start/End: Complemental strand, 37767218 - 37767104
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 223  Q
    |||| ||||||| |||||  |||| ||| ||||| ||| |||| ||||||| |||||||||||||||||||||||||||  | ||||||||| |||||||    
T  37767218 ctccctccgttttaaaatgaatgtcgcaattttgaaatatgcactatttacgtgacttactttgactatactttttaacgtatatataaatacaaatgtt 37767119  T
Q  224 agcatgtacgatatt 238  Q
    || ||||| ||||||    
T  37767118 agaatgtaagatatt 37767104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 127 - 220
Target Start/End: Original strand, 29051689 - 29051782
Alignment:
Q  127 catccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaat 220  Q
    ||||||||| ||||||||||||||| |||| |||| | ||||||| |||| |||||||||||| ||| ||||||||||| ||||||||| ||||    
T  29051689 catccgttttaaaatacatgttgcaattttacaatatacattattcacataacttactttgaccatattttttaactaatatataaatacaaat 29051782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 159 - 231
Target Start/End: Complemental strand, 4467744 - 4467672
Alignment:
Q  159 aatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatgta 231  Q
    |||||||||||||||| |||||| |||||||||||||||||||||||  |||||||| |||| ||||||||||    
T  4467744 aatgtgcattatttacttgacttgctttgactatactttttaactaatgtataaatacaaatattagcatgta 4467672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 129 - 229
Target Start/End: Original strand, 55191831 - 55191931
Alignment:
Q  129 tccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcat 228  Q
    |||||||||||||| |||||  |||||||||||||||| |||| |  |||||||||||||||||||||||||| |||  | |||||| |||| |||||||    
T  55191831 tccgtttcaaaatatatgttcaatttttgcaatgtgcactattcatttgacttactttgactatactttttaattaatgtgtaaatacaaatattagcat 55191930  T
Q  229 g 229  Q
    |    
T  55191931 g 55191931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 132 - 231
Target Start/End: Complemental strand, 12240430 - 12240331
Alignment:
Q  132 gtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatgta 231  Q
    ||||||||||||||||   |||||| ||||||||| |||| |  |||||||||||||| |||||||||||||||  |||||||| |||| ||||||||||    
T  12240430 gtttcaaaatacatgtccaatttttacaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgta 12240331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 132 - 231
Target Start/End: Original strand, 35686383 - 35686482
Alignment:
Q  132 gtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatgta 231  Q
    ||||||||||||||||   |||||||||||||||| |||| || | |||||||||||| |||||||||||||||  |||||||| |||| ||| ||||||    
T  35686383 gtttcaaaatacatgtccaatttttgcaatgtgcactattcacttaacttactttgaccatactttttaactaatgtataaatacaaatattatcatgta 35686482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 132 - 231
Target Start/End: Original strand, 38716897 - 38716995
Alignment:
Q  132 gtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatgta 231  Q
    ||||||||||||||||   |||||||||||||||| |||| |  |||||||||||||| |||||||||||||||  |||||||| |||| ||||||||||    
T  38716897 gtttcaaaatacatgtccaatttttgcaatgtgcactattaat-tgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgta 38716995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 124 - 231
Target Start/End: Complemental strand, 47386546 - 47386439
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 223  Q
    |||| |||||||||||||||||||    |||||| |||||||| |||| || |||||||||||||| ||| |||||||||||  |||||||| |||| ||    
T  47386546 ctccctccgtttcaaaatacatgtccactttttggaatgtgcactattcacttgacttactttgaccatattttttaactaatgtataaatacaaatatt 47386447  T
Q  224 agcatgta 231  Q
    ||||||||    
T  47386446 agcatgta 47386439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 125 - 231
Target Start/End: Original strand, 25918206 - 25918312
Alignment:
Q  125 tccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtta 224  Q
    ||||||||||| |||||||||||   |||||||||||||||| |||| || ||| ||| ||||||  ||||||||||| ||  ||||||||||||| |||    
T  25918206 tccatccgttttaaaatacatgtccaatttttgcaatgtgcactattcacttgaattattttgaccctactttttaaccaatgtataaatataaatatta 25918305  T
Q  225 gcatgta 231  Q
    |||||||    
T  25918306 gcatgta 25918312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 132 - 238
Target Start/End: Original strand, 31010224 - 31010330
Alignment:
Q  132 gtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatgta 231  Q
    |||||||||||||| |   ||||||| |||||||| |||| |  |||||||||||||| |||||||||||||||  |||||||| |||| ||||||||||    
T  31010224 gtttcaaaatacatatccaatttttgtaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaataaaaatattagcatgta 31010323  T
Q  232 cgatatt 238  Q
     ||||||    
T  31010324 agatatt 31010330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 124 - 226
Target Start/End: Original strand, 50205745 - 50205847
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 223  Q
    |||||| |||||||||||||||||    |||||| |||||||| |||| |  |||||||||||||| ||||||||||||||| ||||||||| |||| ||    
T  50205745 ctccattcgtttcaaaatacatgtcaagtttttgtaatgtgcactattcatttgacttactttgaccatactttttaactaatatataaatacaaatatt 50205844  T
Q  224 agc 226  Q
    |||    
T  50205845 agc 50205847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 131 - 231
Target Start/End: Original strand, 30446307 - 30446406
Alignment:
Q  131 cgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatgt 230  Q
    ||||||||||| ||||| |||| |||| ||| ||||||||| |||||||||||||||||  || ||||| ||||| ||||||||| |||||||||| |||    
T  30446307 cgtttcaaaatgcatgtcgcatgtttgtaatctgcattattcacatgacttactttgacccta-tttttgactaatatataaatacaaatgttagcctgt 30446405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 124 - 231
Target Start/End: Original strand, 17610282 - 17610389
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 223  Q
    |||| ||||||| |||||||||||   ||||||||||| |||| |||| || |||||||||||||| ||| |||||| ||||  |||||||| |||| ||    
T  17610282 ctccctccgttttaaaatacatgtccaatttttgcaatatgcactattcacttgacttactttgaccatattttttagctaatgtataaatacaaatatt 17610381  T
Q  224 agcatgta 231  Q
    ||||||||    
T  17610382 agcatgta 17610389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 124 - 231
Target Start/End: Original strand, 26125710 - 26125817
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 223  Q
    |||| |||||||||||||| |  ||  |||||| |||| ||||||||| || |||||||||||||| ||| |||||||||||  |||||||| |||| ||    
T  26125710 ctccctccgtttcaaaatataaattcaatttttacaatatgcattattcacttgacttactttgaccatattttttaactaatgtataaatacaaatatt 26125809  T
Q  224 agcatgta 231  Q
    ||||||||    
T  26125810 agcatgta 26125817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 152 - 231
Target Start/End: Original strand, 45291862 - 45291941
Alignment:
Q  152 tttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatgta 231  Q
    ||||| ||||||||| |||| || |||||||||||||  ||||||||||||||| ||||||||| |||| ||||||||||    
T  45291862 tttttccaatgtgcactattcacttgacttactttgatcatactttttaactaatatataaatacaaatattagcatgta 45291941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 132 - 231
Target Start/End: Complemental strand, 19433614 - 19433511
Alignment:
Q  132 gtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgac----tatactttttaactaacatataaatataaatgttagca 227  Q
    |||||||||||||||||  |||||||||||||||| | || || ||||||||||||||    |||||||||||||||   |||||||| |||| ||||||    
T  19433614 gtttcaaaatacatgttcaatttttgcaatgtgcacttttcacttgacttactttgaccatatatactttttaactattgtataaatacaaatattagca 19433515  T
Q  228 tgta 231  Q
    ||||    
T  19433514 tgta 19433511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 133 - 211
Target Start/End: Original strand, 27755730 - 27755808
Alignment:
Q  133 tttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatata 211  Q
    ||||||||||||||| ||||||||| ||||| |||| || | || ||||| |||||| |||||||||||||||||||||    
T  27755730 tttcaaaatacatgtcgcatttttgtaatgtacattgttcatataacttattttgaccatactttttaactaacatata 27755808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 127 - 228
Target Start/End: Complemental strand, 20875504 - 20875403
Alignment:
Q  127 catccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagc 226  Q
    |||| |||||||||||||||||| | ||||  |||||||| |||| | || | |||||||||| ||| ||||||||||| |||||||| |||||||| ||    
T  20875504 catctgtttcaaaatacatgttgtaattttaaaatgtgcactattcatataatttactttgaccatattttttaactaatatataaatgtaaatgtttgc 20875405  T
Q  227 at 228  Q
    ||    
T  20875404 at 20875403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 124 - 223
Target Start/End: Original strand, 23360180 - 23360276
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 223  Q
    |||||| | ||||||||||||||| ||||||||||||| |||| ||||  ||||||||||||||||  || ||||||||||| |||| |||| |||||||    
T  23360180 ctccattcatttcaaaatacatgtcgcatttttgcaatatgcactatt--catgacttactttgac-ctattttttaactaatatatgaatacaaatgtt 23360276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 124 - 238
Target Start/End: Complemental strand, 9029712 - 9029595
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatt---tttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaat 220  Q
    |||||||||||| |||||||||||   |||   |||||||| || | ||||||| | |||||||||||| |||||||||||||||  |||||||| ||||    
T  9029712 ctccatccgttttaaaatacatgtccaattaattttgcaatctgtactatttacttaacttactttgaccatactttttaactaatgtataaatacaaat 9029613  T
Q  221 gttagcatgtacgatatt 238  Q
     |||||| ||| ||||||    
T  9029612 attagcacgtaagatatt 9029595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 138 - 228
Target Start/End: Complemental strand, 56297948 - 56297858
Alignment:
Q  138 aaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcat 228  Q
    |||||||||| | |||||| |||||| ||||||| |||| ||||  |||||| ||| || |||||||| ||||||||| ||||||||||||    
T  56297948 aaatacatgtcgtatttttacaatgtacattattcacataacttgttttgaccatatttattaactaatatataaatacaaatgttagcat 56297858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 129 - 238
Target Start/End: Complemental strand, 30191723 - 30191619
Alignment:
Q  129 tccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcat 228  Q
    ||||||||||||||||||||||| |||| ||||||||| |||| ||||  ||||||||     ||  |||| || || |||||||||||||||||| |||    
T  30191723 tccgtttcaaaatacatgttgcaattttacaatgtgcactattcacatagcttacttt-----tatgtttttacgaatatataaatataaatgttaacat 30191629  T
Q  229 gtacgatatt 238  Q
    ||| ||||||    
T  30191628 gtaagatatt 30191619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 129 - 186
Target Start/End: Original strand, 34323076 - 34323133
Alignment:
Q  129 tccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttacttt 186  Q
    ||||||||||||||||||  ||||||||  ||||||||||||| ||||||||||||||    
T  34323076 tccgtttcaaaatacatgacgcatttttataatgtgcattattcacatgacttacttt 34323133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 228
Target Start/End: Original strand, 34316536 - 34316626
Alignment:
Q  137 aaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcat 228  Q
    |||||| |||| | |||||| || |||||| |||||| ||||||||||||||  ||| || |||||||| ||||||||| ||||||||||||    
T  34316536 aaaatatatgtcgtatttttacagtgtgcactatttatatgacttactttgatcata-ttgttaactaatatataaatacaaatgttagcat 34316626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 231
Target Start/End: Original strand, 19595734 - 19595814
Alignment:
Q  151 atttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatgta 231  Q
    |||||| |||| |||| |||| || ||||||||||| || ||||| |||||||||  |||||||| |||| ||||||||||    
T  19595734 atttttacaatatgcactattcacttgacttactttaaccatactctttaactaatgtataaatacaaatattagcatgta 19595814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 231
Target Start/End: Original strand, 10550434 - 10550535
Alignment:
Q  132 gtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttt--taactaacatataaatataaatgttagcatg 229  Q
    |||| ||||||  ||||||| |||| |||| |||| |||| |||||  ||||||| || ||| ||||  ||||||| ||||||||| |||||||||||||    
T  10550434 gttttaaaatatctgttgcaattttacaatatgcactattcacatggtttactttaaccatattttttttaactaatatataaataaaaatgttagcatg 10550533  T
Q  230 ta 231  Q
    ||    
T  10550534 ta 10550535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 230
Target Start/End: Complemental strand, 19903854 - 19903804
Alignment:
Q  180 ttactttgactatactttttaactaacatataaatataaatgttagcatgt 230  Q
    |||||||||| |||  |||||||||| ||||||||| ||||||||||||||    
T  19903854 ttactttgaccatatattttaactaatatataaatacaaatgttagcatgt 19903804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 231
Target Start/End: Complemental strand, 50620937 - 50620835
Alignment:
Q  129 tccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcat 228  Q
    ||||||| |||||| ||||   ||||| ||||| |||| |||| || | |||||||||||| |||| ||||||||||  ||||||||  ||| |||||||    
T  50620937 tccgttttaaaatatatgtccaattttagcaatatgcactattcacttaacttactttgaccatacattttaactaatgtataaatactaatattagcat 50620838  T
Q  229 gta 231  Q
    |||    
T  50620837 gta 50620835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 224
Target Start/End: Original strand, 40682627 - 40682720
Alignment:
Q  131 cgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtta 224  Q
    |||||||||||| |||  |||||||| ||||||||| | |||||| || ||| ||| || |||||||||||   | ||||||||| ||||||||    
T  40682627 cgtttcaaaatatatgccgcatttttacaatgtgcagtgtttacaagatttattttaaccatactttttaatcgatatataaatagaaatgtta 40682720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 77; Significance: 8e-36; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 124 - 244
Target Start/End: Original strand, 36341622 - 36341742
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 223  Q
    |||||| ||||||||||||||||| |||||||||||||||||| |||| |||||||||| ||| || |||||||||||||||||||||||||||||||||    
T  36341622 ctccattcgtttcaaaatacatgtcgcatttttgcaatgtgcactattcacatgacttaatttaacgatactttttaactaacatataaatataaatgtt 36341721  T
Q  224 agcatgtacgatattcttcga 244  Q
    || ||||| ||| || |||||    
T  36341722 agaatgtaagatgttgttcga 36341742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 124 - 231
Target Start/End: Complemental strand, 28061775 - 28061668
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 223  Q
    |||| |||||||||||||||||||   |||||||||||||||| |||| || |||||||||||||| ||||||||||||||| ||||||||| |||| ||    
T  28061775 ctccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatatt 28061676  T
Q  224 agcatgta 231  Q
    ||||||||    
T  28061675 agcatgta 28061668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 124 - 231
Target Start/End: Original strand, 36623310 - 36623417
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 223  Q
    |||| |||||||||||||||||||   |||||||||||||||| |||| || |||||||||||||| ||||||||||||||| ||||||||| |||| ||    
T  36623310 ctccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatatt 36623409  T
Q  224 agcatgta 231  Q
    ||||||||    
T  36623410 agcatgta 36623417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 124 - 231
Target Start/End: Original strand, 47156029 - 47156136
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 223  Q
    |||| |||||||||||||||||||   |||||||||||||||| |||| || |||||||||||||| ||||||||||||||| ||||||||| |||| ||    
T  47156029 ctccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatatt 47156128  T
Q  224 agcatgta 231  Q
    ||||||||    
T  47156129 agcatgta 47156136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 124 - 238
Target Start/End: Complemental strand, 38852107 - 38851993
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 223  Q
    |||| |||||||||||||||||||   |||||| ||||||||| |||| || |||||||||||||| ||||||||||||||| ||||||||| |||| ||    
T  38852107 ctccctccgtttcaaaatacatgtccaatttttccaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatatt 38852008  T
Q  224 agcatgtacgatatt 238  Q
    |||||||| ||||||    
T  38852007 agcatgtaagatatt 38851993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 124 - 231
Target Start/End: Original strand, 41897990 - 41898097
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 223  Q
    |||| |||||||||||||||||||   |||||||||||||||| |||| || |||||||||||||  ||||||||||||||| ||||||||| |||| ||    
T  41897990 ctccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgatcatactttttaactaatatataaatacaaatatt 41898089  T
Q  224 agcatgta 231  Q
    ||||||||    
T  41898090 agcatgta 41898097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 124 - 231
Target Start/End: Complemental strand, 42890603 - 42890496
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 223  Q
    ||||||||||||||||||||||||   |||||||||||||||| |||| |  ||||||| |||||| ||||||||||||||| ||||||||| |||| ||    
T  42890603 ctccatccgtttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttattttgaccatactttttaactaatatataaatacaaatatt 42890504  T
Q  224 agcatgta 231  Q
    ||||||||    
T  42890503 agcatgta 42890496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 127 - 231
Target Start/End: Original strand, 30342079 - 30342183
Alignment:
Q  127 catccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagc 226  Q
    ||||||||| |||||||||| |  ||||||||||||||||||||| || ||| ||||||||||||||||||||||||||  |||||||| |||| ||||     
T  30342079 catccgttttaaaatacatgatcaatttttgcaatgtgcattattcacttgatttactttgactatactttttaactaatgtataaatacaaatattagt 30342178  T
Q  227 atgta 231  Q
    |||||    
T  30342179 atgta 30342183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 124 - 227
Target Start/End: Original strand, 8683820 - 8683923
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 223  Q
    |||||| ||||| |||||||||||   ||||||| ||||||||||||| || |||||||||||||| ||||||||||||||| ||||||||| |||| ||    
T  8683820 ctccattcgttttaaaatacatgtccaatttttgaaatgtgcattattcacttgacttactttgaccatactttttaactaatatataaatacaaatatt 8683919  T
Q  224 agca 227  Q
    ||||    
T  8683920 agca 8683923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 124 - 231
Target Start/End: Complemental strand, 32431618 - 32431511
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 223  Q
    |||| |||||||||||||| ||||   ||||||||||||||||||||| || |||||||||||||| |||||||||||||||  |||||||| |||| ||    
T  32431618 ctccctccgtttcaaaatatatgtcaaatttttgcaatgtgcattattcacttgacttactttgaccatactttttaactaatgtataaatacaaatatt 32431519  T
Q  224 agcatgta 231  Q
    || |||||    
T  32431518 agtatgta 32431511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 129 - 231
Target Start/End: Original strand, 40256064 - 40256166
Alignment:
Q  129 tccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcat 228  Q
    |||||||||||||||||||   |||||||||||||||  |||| || |||||||||||||| |||||||||||||||  |||||||| |||| |||||||    
T  40256064 tccgtttcaaaatacatgtccaatttttgcaatgtgctctattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcat 40256163  T
Q  229 gta 231  Q
    |||    
T  40256164 gta 40256166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 127 - 228
Target Start/End: Complemental strand, 27045665 - 27045564
Alignment:
Q  127 catccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagc 226  Q
    ||||||||||||||||||||||||| |||| ||||||  | |||| |||||  |||||||||| ||| ||||||||||| ||||||||| ||||||||||    
T  27045665 catccgtttcaaaatacatgttgcaattttacaatgtatactattcacatggtttactttgaccatattttttaactaatatataaatacaaatgttagc 27045566  T
Q  227 at 228  Q
    ||    
T  27045565 at 27045564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 124 - 231
Target Start/End: Complemental strand, 6766810 - 6766703
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 223  Q
    |||| ||||||||||||||||||| ||| |||| |||| ||||||||| |||| ||||| |||||| ||| |||||||||||  |||||||  |||||||    
T  6766810 ctccctccgtttcaaaatacatgtcgcaattttacaatctgcattattcacataacttattttgaccatattttttaactaatgtataaatgcaaatgtt 6766711  T
Q  224 agcatgta 231  Q
    ||||||||    
T  6766710 agcatgta 6766703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 132 - 231
Target Start/End: Original strand, 7438913 - 7439012
Alignment:
Q  132 gtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatgta 231  Q
    ||||||||||||||||   ||||||||||| ||||||||| || ||||||| |||||| |||||||||||||||  |||||||| |||| ||||||||||    
T  7438913 gtttcaaaatacatgtctaatttttgcaatatgcattattcacttgacttattttgaccatactttttaactaatgtataaatacaaatattagcatgta 7439012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 124 - 231
Target Start/End: Complemental strand, 7457981 - 7457875
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 223  Q
    ||||||||||||||||||||||||   | |||||||||||||| |||| || | |||||||||||| |||||||||||||||  |||||||| |||| ||    
T  7457981 ctccatccgtttcaaaatacatgtctaagttttgcaatgtgcactattcactt-acttactttgaccatactttttaactaatgtataaatacaaatatt 7457883  T
Q  224 agcatgta 231  Q
    ||||||||    
T  7457882 agcatgta 7457875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 124 - 231
Target Start/End: Complemental strand, 39130186 - 39130079
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 223  Q
    |||||||||||| ||||||||| ||  |||||||||||||||| |||| || |||||| ||||||| ||| |||||||||||  |||||||| |||| ||    
T  39130186 ctccatccgttttaaaatacatctttaatttttgcaatgtgcactattcacttgactttctttgaccatattttttaactaatgtataaatacaaatatt 39130087  T
Q  224 agcatgta 231  Q
    ||||||||    
T  39130086 agcatgta 39130079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 124 - 231
Target Start/End: Complemental strand, 40090178 - 40090071
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 223  Q
    |||| ||||||| |||||| ||||   |||||| ||||||||| |||| || |||||||||||||| ||||||||||||||| ||||||||| |||| ||    
T  40090178 ctccctccgttttaaaatatatgtccaattttttcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatatt 40090079  T
Q  224 agcatgta 231  Q
    ||||||||    
T  40090078 agcatgta 40090071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 129 - 220
Target Start/End: Original strand, 42662194 - 42662284
Alignment:
Q  129 tccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaat 220  Q
    ||||||||||||||||||| ||| |||||||||||| |||||| ||||  ||||||||||| ||||||||||||||| ||||||||| ||||    
T  42662194 tccgtttcaaaatacatgtcgcaattttgcaatgtgtattattcacat-tcttactttgaccatactttttaactaatatataaatacaaat 42662284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 124 - 231
Target Start/End: Original strand, 48602438 - 48602545
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 223  Q
    |||| ||||||||||||||||||    |||||| ||||||||| |||| |  |||||||||||||| ||||||||||||||| ||||||||| |||| ||    
T  48602438 ctccctccgtttcaaaatacatgcccaatttttccaatgtgcactattcatttgacttactttgaccatactttttaactaatatataaatacaaatatt 48602537  T
Q  224 agcatgta 231  Q
    ||||||||    
T  48602538 agcatgta 48602545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 137 - 231
Target Start/End: Original strand, 44732027 - 44732121
Alignment:
Q  137 aaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatgta 231  Q
    ||||||||||||  |||||||||||||||| |||| || |||||||||||||  |||||||||||||||  |||||||| |||| ||||||||||    
T  44732027 aaaatacatgttcaatttttgcaatgtgcactattcacttgacttactttgatcatactttttaactaatgtataaatacaaatattagcatgta 44732121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 124 - 205
Target Start/End: Complemental strand, 46322225 - 46322144
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaa 205  Q
    |||| ||| |||||||||||||||   ||||||||||||||||||||| || |||||||||||||| |||||||||||||||    
T  46322225 ctccctccatttcaaaatacatgtccaatttttgcaatgtgcattattcacttgacttactttgaccatactttttaactaa 46322144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 132 - 231
Target Start/End: Complemental strand, 11502832 - 11502733
Alignment:
Q  132 gtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatgta 231  Q
    ||||||||||||||||   ||||||| ||||||||||||| || | |||||||||||  |||||||||||||||  |||||||| |||| ||||||||||    
T  11502832 gtttcaaaatacatgtccaatttttgtaatgtgcattattgacttaacttactttgatcatactttttaactaatgtataaatacaaatattagcatgta 11502733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 124 - 231
Target Start/End: Original strand, 16778507 - 16778614
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 223  Q
    |||| |||||||||||||||||||   | |||||||||||||| |||| || || ||||||||||| ||| |||||||||||  |||||||| |||| ||    
T  16778507 ctccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttggcttactttgaccataatttttaactaatgtataaatacaaatatt 16778606  T
Q  224 agcatgta 231  Q
    ||||||||    
T  16778607 agcatgta 16778614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 124 - 231
Target Start/End: Original strand, 20885105 - 20885212
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 223  Q
    |||| |||||||||||||||||||   |||||| ||||||| | |||| || |||||||||||||| ||| |||||||||||  |||||||| |||| ||    
T  20885105 ctccctccgtttcaaaatacatgtccaatttttacaatgtggactattcacttgacttactttgaccatattttttaactaatgtataaatacaaatatt 20885204  T
Q  224 agcatgta 231  Q
    ||||||||    
T  20885205 agcatgta 20885212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 124 - 231
Target Start/End: Original strand, 35117128 - 35117234
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 223  Q
    |||| ||||||| ||||||| ||||  ||||||||||| |||| |||| || |||||||||||||| |||| ||||||||||  ||||||||||||| ||    
T  35117128 ctccctccgttttaaaatacctgttcaatttttgcaatatgcactattcacttgacttactttgaccatac-ttttaactaatgtataaatataaatatt 35117226  T
Q  224 agcatgta 231  Q
    ||||||||    
T  35117227 agcatgta 35117234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 126 - 220
Target Start/End: Original strand, 7169130 - 7169224
Alignment:
Q  126 ccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaat 220  Q
    ||||||||||||||||||||||   | ||||||||||||   |||| |||||| |||||||||||||| ||||||||||| ||||||||| ||||    
T  7169130 ccatccgtttcaaaatacatgtcataattttgcaatgtgtcatattcacatgatttactttgactatattttttaactaatatataaatacaaat 7169224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 127 - 231
Target Start/End: Complemental strand, 4131760 - 4131656
Alignment:
Q  127 catccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagc 226  Q
    |||||||||||||||| |||| ||| |||| ||||||  | |||| |||| ||||||||| || ||| ||||||||||| ||||||||| ||| ||||||    
T  4131760 catccgtttcaaaatatatgtcgcaattttacaatgtatactattcacataacttactttaaccatattttttaactaatatataaatacaaaagttagc 4131661  T
Q  227 atgta 231  Q
    |||||    
T  4131660 atgta 4131656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 131 - 231
Target Start/End: Original strand, 46479838 - 46479938
Alignment:
Q  131 cgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatgt 230  Q
    ||||||||||||||||||  |||||| ||||||||| ||||  | |||||||||||||| | | |||||||||||  |||||||| |||| |||||||||    
T  46479838 cgtttcaaaatacatgtttaatttttacaatgtgcactattcgcttgacttactttgaccaaaatttttaactaatgtataaatacaaatattagcatgt 46479937  T
Q  231 a 231  Q
    |    
T  46479938 a 46479938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 129 - 231
Target Start/End: Original strand, 36585116 - 36585218
Alignment:
Q  129 tccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcat 228  Q
    ||||||||||||||||| |   |||||||||||||||| |||| || ||||||| ||| || |||||||| ||||||  |||||||| |||| |||||||    
T  36585116 tccgtttcaaaatacatatccaatttttgcaatgtgcactattcacttgacttatttttaccatacttttaaactaatgtataaatacaaatattagcat 36585215  T
Q  229 gta 231  Q
    |||    
T  36585216 gta 36585218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 124 - 220
Target Start/End: Original strand, 2952424 - 2952521
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactata-ctttttaactaacatataaatataaat 220  Q
    |||||||||||||||||||| ||||||| |||| ||| |||||||||| || |  ||||||||||| |||  |||||||||||  |||||||||||||    
T  2952424 ctccatccgtttcaaaatacgtgttgcaattttacaacgtgcattattcacgtagcttactttgaccatatttttttaactaatttataaatataaat 2952521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 129 - 230
Target Start/End: Complemental strand, 25566802 - 25566702
Alignment:
Q  129 tccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcat 228  Q
    |||||||||||||||||||   |||||| ||||||||| |||| || |||||||||||||| ||||||| |||||||  ||| |||| |||| |||||||    
T  25566802 tccgtttcaaaatacatgtccaatttttacaatgtgcactattcacttgacttactttgaccatactttctaactaatgtat-aatacaaatattagcat 25566704  T
Q  229 gt 230  Q
    ||    
T  25566703 gt 25566702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 124 - 231
Target Start/End: Complemental strand, 46103623 - 46103523
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 223  Q
    |||| |||||||||||||||||||   |||||| ||||||||| |       |||||||||||||| ||||||||||||||| ||||||||| |||| ||    
T  46103623 ctccctccgtttcaaaatacatgtccaatttttacaatgtgcact-------tgacttactttgaccatactttttaactaatatataaatacaaatatt 46103531  T
Q  224 agcatgta 231  Q
    ||||||||    
T  46103530 agcatgta 46103523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 127 - 231
Target Start/End: Original strand, 5529016 - 5529120
Alignment:
Q  127 catccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagc 226  Q
    |||||||||||||||||||||   | |||| |||||| || ||||||| |   ||| |||||||||| ||||||||||| ||| ||||| ||||||||||    
T  5529016 catccgtttcaaaatacatgtcctaattttacaatgtacactatttacgtagattattttgactatattttttaactaatatacaaataaaaatgttagc 5529115  T
Q  227 atgta 231  Q
    |||||    
T  5529116 atgta 5529120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 231
Target Start/End: Original strand, 34750507 - 34750611
Alignment:
Q  129 tccgtttcaaaa-tacatgttgcatttttgcaatgtgcattattt-acatgacttactttgactatactttttaactaacatataaatataaatgttagc 226  Q
    |||||||||||| || ||||| ||||||||||  ||| | ||||| |||||||||||||||||  |||||||||||||| ||| ||||| |||||||| |    
T  34750507 tccgtttcaaaaataaatgttacatttttgcatcgtgaactatttcacatgacttactttgaccctactttttaactaatatacaaataaaaatgttaac 34750606  T
Q  227 atgta 231  Q
    |||||    
T  34750607 atgta 34750611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 124 - 231
Target Start/End: Original strand, 42877388 - 42877495
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 223  Q
    |||| |||||||||||||||||||   | ||||| |||||||| |||| |  | |||||||||||| |||||||||||||||  |||||||| |||| ||    
T  42877388 ctccctccgtttcaaaatacatgtccaaattttgtaatgtgcactattaatttaacttactttgaccatactttttaactaatgtataaataaaaatatt 42877487  T
Q  224 agcatgta 231  Q
    || |||||    
T  42877488 agaatgta 42877495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 125 - 231
Target Start/End: Original strand, 6174839 - 6174945
Alignment:
Q  125 tccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtta 224  Q
    |||||||||||||||||| ||||   |||||||||| ||||| |||| |  ||||||||| |||| ||| |||||||||||  |||||||| |||  |||    
T  6174839 tccatccgtttcaaaatatatgtccaatttttgcaaggtgcactattcatttgacttactgtgaccatattttttaactaatgtataaatacaaacatta 6174938  T
Q  225 gcatgta 231  Q
    |||||||    
T  6174939 gcatgta 6174945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 133 - 231
Target Start/End: Original strand, 26161607 - 26161705
Alignment:
Q  133 tttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatgta 231  Q
    |||||||||||||||  ||||| |  |||| ||| |||| |||||| ||| |||||| || |||||||||||| ||||||||| |||| ||||||||||    
T  26161607 tttcaaaatacatgtcacatttgtataatgcgcactattcacatgatttattttgaccatgctttttaactaatatataaatacaaatattagcatgta 26161705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 238
Target Start/End: Original strand, 3851082 - 3851190
Alignment:
Q  127 catccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagc 226  Q
    ||||||| |||||||| ||||   ||||||||||||||||||    || |||||||||||||| |||||||||||||||  |||||||| |||| ||| |    
T  3851082 catccgtctcaaaatatatgtccaatttttgcaatgtgcattc---acttgacttactttgacaatactttttaactaatgtataaatacaaatattaac 3851178  T
Q  227 atgtacgatatt 238  Q
    | ||| ||||||    
T  3851179 acgtaagatatt 3851190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 124 - 228
Target Start/End: Complemental strand, 47526097 - 47525992
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatacttttt-aactaacatataaatataaatgt 222  Q
    |||||||||||| |||||| |||| ||| |||| || | |||||||||||| |  ||||||||||  ||| ||||| |||||| ||||||||| ||||||    
T  47526097 ctccatccgttttaaaatatatgtcgcaattttacattatgcattatttacctagcttactttgatcatatttttttaactaatatataaatacaaatgt 47525998  T
Q  223 tagcat 228  Q
    ||||||    
T  47525997 tagcat 47525992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 124 - 202
Target Start/End: Original strand, 45331917 - 45331992
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaac 202  Q
    |||| |||||||||||| ||||||   ||||||||||| ||||||||| | ||||||||||||||| ||| ||||||||    
T  45331917 ctccctccgtttcaaaacacatgt---atttttgcaatatgcattattcatatgacttactttgaccatattttttaac 45331992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 124 - 224
Target Start/End: Complemental strand, 49110730 - 49110630
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 223  Q
    |||||||||||| |||||||||||  || ||||  |||||| | |||| | |||| |||||||||| ||| ||||||||||| |||| |||| |||||||    
T  49110730 ctccatccgttttaaaatacatgtcacaattttataatgtgtactattcaaatgatttactttgaccatattttttaactaatatattaatacaaatgtt 49110631  T
Q  224 a 224  Q
    |    
T  49110630 a 49110630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 223
Target Start/End: Complemental strand, 16870728 - 16870641
Alignment:
Q  136 caaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 223  Q
    |||||||||||| ||  |||| |||| |||| |||| | || |||||||||||| ||| || |||||||| |||||||||||||||||    
T  16870728 caaaatacatgtcgcggttttacaatatgcactattcaaataacttactttgaccatatttgttaactaatatataaatataaatgtt 16870641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 231
Target Start/End: Complemental strand, 35570309 - 35570202
Alignment:
Q  129 tccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactata-----ctttttaactaacatataaatataaatgtt 223  Q
    ||||||||||||||||||| ||| |||| ||||||||| |||| |||  |||||||||||| |||      ||||||||||| ||| ||||| |||| ||    
T  35570309 tccgtttcaaaatacatgtcgcaattttacaatgtgcactattcacaaaacttactttgaccatatttttttttttaactaatatacaaatacaaatttt 35570210  T
Q  224 agcatgta 231  Q
    ||||||||    
T  35570209 agcatgta 35570202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 124 - 231
Target Start/End: Complemental strand, 41134743 - 41134641
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 223  Q
    |||||||||||| ||||||||||||  |||||| ||||||| | |||| |  |||||||||||||| |||     |||||||  |||||||| |||| ||    
T  41134743 ctccatccgttttaaaatacatgttcaatttttacaatgtgtactattcatttgacttactttgaccata-----taactaatgtataaatacaaatatt 41134649  T
Q  224 agcatgta 231  Q
    ||||||||    
T  41134648 agcatgta 41134641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 180 - 225
Target Start/End: Original strand, 3785578 - 3785623
Alignment:
Q  180 ttactttgactatactttttaactaacatataaatataaatgttag 225  Q
    |||||||||| ||| ||||||||||| ||||||||| |||||||||    
T  3785578 ttactttgaccatattttttaactaatatataaatacaaatgttag 3785623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 200
Target Start/End: Original strand, 26980056 - 26980125
Alignment:
Q  131 cgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatacttttta 200  Q
    |||||||||||| |||||||| ||||  ||| ||||||||| |||| ||||| |||||| ||| ||||||    
T  26980056 cgtttcaaaataaatgttgcaattttataatatgcattattcacataacttattttgaccatatttttta 26980125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 231
Target Start/End: Complemental strand, 39278525 - 39278484
Alignment:
Q  190 tatactttttaactaacatataaatataaatgttagcatgta 231  Q
    |||| ||||||||||| ||||||||||||||||||| |||||    
T  39278525 tatattttttaactaatatataaatataaatgttagtatgta 39278484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 228
Target Start/End: Complemental strand, 37467511 - 37467463
Alignment:
Q  180 ttactttgactatactttttaactaacatataaatataaatgttagcat 228  Q
    ||||||| || ||| ||||||||||| ||||||||| ||||||||||||    
T  37467511 ttactttaaccatattttttaactaatatataaatacaaatgttagcat 37467463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 222
Target Start/End: Complemental strand, 38767265 - 38767221
Alignment:
Q  178 acttactttgactatactttttaactaacatataaatataaatgt 222  Q
    |||||||||||| ||| ||||||||||| ||||||||| ||||||    
T  38767265 acttactttgaccatattttttaactaatatataaatacaaatgt 38767221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 74; Significance: 5e-34; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 131 - 244
Target Start/End: Original strand, 44561793 - 44561906
Alignment:
Q  131 cgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatgt 230  Q
    |||||||||||||||||||||| ||||||||||||| |||| ||||||||||||||||| ||||||||||||||||||||||||| |||||||  |||||    
T  44561793 cgtttcaaaatacatgttgcatgtttgcaatgtgcactattcacatgacttactttgaccatactttttaactaacatataaatacaaatgttgacatgt 44561892  T
Q  231 acgatattcttcga 244  Q
    | ||| || |||||    
T  44561893 aagatgttgttcga 44561906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 124 - 231
Target Start/End: Complemental strand, 27334991 - 27334884
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 223  Q
    |||| ||||||||||||||||||||  |||||||||||||||| |||| || |||||||||||||| ||||||||||||||| ||||||||| |||| ||    
T  27334991 ctccttccgtttcaaaatacatgttcaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatatt 27334892  T
Q  224 agcatgta 231  Q
    ||||||||    
T  27334891 agcatgta 27334884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 124 - 231
Target Start/End: Complemental strand, 13499595 - 13499488
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 223  Q
    |||| |||||||||||||||||||   |||||||||||||||| |||| || |||||||||||||| ||||||||||||||| ||||||||| |||| ||    
T  13499595 ctccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatatt 13499496  T
Q  224 agcatgta 231  Q
    ||||||||    
T  13499495 agcatgta 13499488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 124 - 231
Target Start/End: Complemental strand, 42490456 - 42490349
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 223  Q
    |||| |||||||||||||||||||   |||||||||||||||| |||| || |||||||||||||| ||||||||||||||| ||||||||| |||| ||    
T  42490456 ctccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatatt 42490357  T
Q  224 agcatgta 231  Q
    ||||||||    
T  42490356 agcatgta 42490349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 124 - 231
Target Start/End: Original strand, 20765198 - 20765305
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 223  Q
    |||| ||||||| |||||||||||   |||||||||||||||| |||| || |||||||||||||||||||||||||||||| ||||||||| |||| ||    
T  20765198 ctccctccgttttaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgactatactttttaactaatatataaatacaaatatt 20765297  T
Q  224 agcatgta 231  Q
    | ||||||    
T  20765298 aacatgta 20765305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 124 - 231
Target Start/End: Original strand, 21005295 - 21005402
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 223  Q
    |||| ||||||||||||||||||||  |||||||||| ||||| |||| || | |||||||||||| ||||||||||| ||| |||||||||||||| ||    
T  21005295 ctccctccgtttcaaaatacatgttcaatttttgcaacgtgcactattcacttcacttactttgaccatactttttaattaatatataaatataaatatt 21005394  T
Q  224 agcatgta 231  Q
    ||||||||    
T  21005395 agcatgta 21005402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 124 - 231
Target Start/End: Complemental strand, 27010734 - 27010627
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 223  Q
    |||| |||||||||||||||||||   |||||||||||||||| |||| || |||||||||||||| | ||||||||||||| ||||||||| |||| ||    
T  27010734 ctccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccaaactttttaactaatatataaatacaaatatt 27010635  T
Q  224 agcatgta 231  Q
    ||||||||    
T  27010634 agcatgta 27010627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 132 - 231
Target Start/End: Original strand, 33415809 - 33415908
Alignment:
Q  132 gtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatgta 231  Q
    ||||||||||||||||   ||||||||||||||| |||||||  |||||||||||||| ||||||||||||||| ||||||||| |||| ||||||||||    
T  33415809 gtttcaaaatacatgtccaatttttgcaatgtgcgttatttatttgacttactttgaccatactttttaactaatatataaatacaaatattagcatgta 33415908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 124 - 231
Target Start/End: Complemental strand, 39866401 - 39866294
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 223  Q
    |||| ||||||| |||||||||||   |||||||||||||||| |||| || |||||||||||||| ||||||||||||||| ||||||||| |||| ||    
T  39866401 ctccctccgttttaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatatt 39866302  T
Q  224 agcatgta 231  Q
    ||||||||    
T  39866301 agcatgta 39866294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 124 - 231
Target Start/End: Complemental strand, 42761743 - 42761636
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 223  Q
    |||| |||||||||||||||||||   |||||| ||||||||| |||| || |||||||||||||| ||||||||||||||| ||||||||| |||| ||    
T  42761743 ctccctccgtttcaaaatacatgtccaatttttacaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatatt 42761644  T
Q  224 agcatgta 231  Q
    ||||||||    
T  42761643 agcatgta 42761636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 124 - 205
Target Start/End: Original strand, 45613575 - 45613656
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaa 205  Q
    |||||||||||||||||| |||||   |||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  45613575 ctccatccgtttcaaaattcatgtccaatttttgcaatgtgcactatttacttgacttactttgactatactttttaactaa 45613656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 124 - 216
Target Start/End: Original strand, 19823902 - 19823994
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatat 216  Q
    |||| |||||||||||||||||||   |||||||||||||||| |||| || |||||||||||||| |||||||||||||||  |||||||||    
T  19823902 ctccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatgtataaatat 19823994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 129 - 225
Target Start/End: Complemental strand, 34912397 - 34912301
Alignment:
Q  129 tccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttag 225  Q
    |||||||||||||||||||   |||||||||||||||| |||| || |||||||||||||| |||||||||||||||  |||||||| |||| ||||    
T  34912397 tccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattag 34912301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 137 - 231
Target Start/End: Complemental strand, 3430521 - 3430427
Alignment:
Q  137 aaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatgta 231  Q
    ||||||||||||||| |||| ||||||||| |||||| || |||||||||||| ||| ||||||||||| |||| |||| |||| ||||||||||    
T  3430521 aaaatacatgttgcaattttacaatgtgcactatttatataacttactttgaccatattttttaactaatatattaataaaaatattagcatgta 3430427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 129 - 231
Target Start/End: Original strand, 21797563 - 21797665
Alignment:
Q  129 tccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcat 228  Q
    |||||||||||||||||||   |||||||||||||||| |||| || ||| ||| |||||| |||||||||||||||  |||||||| |||| |||||||    
T  21797563 tccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttattttgaccatactttttaactaatgtataaatacaaatattagcat 21797662  T
Q  229 gta 231  Q
    |||    
T  21797663 gta 21797665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 133 - 231
Target Start/End: Original strand, 33803532 - 33803631
Alignment:
Q  133 tttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatac-tttttaactaacatataaatataaatgttagcatgta 231  Q
    |||||||||||||||   |||||||||||||||| |||| || |||||||||||||| |||| |||||||||||  ||||||||||||| ||||| ||||    
T  33803532 tttcaaaatacatgtctaatttttgcaatgtgcactattcacttgacttactttgaccatacttttttaactaatgtataaatataaatattagcttgta 33803631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 172 - 231
Target Start/End: Original strand, 44856396 - 44856455
Alignment:
Q  172 tacatgacttactttgactatactttttaactaacatataaatataaatgttagcatgta 231  Q
    ||||||||||||||| |||||||||||||||||||||||||||| ||||||||| |||||    
T  44856396 tacatgacttactttaactatactttttaactaacatataaatacaaatgttagtatgta 44856455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 124 - 228
Target Start/End: Complemental strand, 41253023 - 41252919
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 223  Q
    ||||||| ||||||||||| |||| ||| |||| ||||||||| |||| | ||  |||||||| || ||| ||||||||||| ||||||||| |||||||    
T  41253023 ctccatctgtttcaaaatatatgtcgcaattttacaatgtgcactattcatatagcttactttaaccatattttttaactaatatataaatacaaatgtt 41252924  T
Q  224 agcat 228  Q
    |||||    
T  41252923 agcat 41252919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 124 - 231
Target Start/End: Complemental strand, 43181616 - 43181508
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatac-tttttaactaacatataaatataaatgt 222  Q
    |||||||||||| ||||||||||||  ||||| | |||||||| |||| || ||| |||||||||| |||| |||||||||||  ||||||||||||| |    
T  43181616 ctccatccgtttaaaaatacatgtttaattttcgtaatgtgcactattcacttgatttactttgaccatacttttttaactaatgtataaatataaatat 43181517  T
Q  223 tagcatgta 231  Q
    ||| |||||    
T  43181516 tagtatgta 43181508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 132 - 231
Target Start/End: Complemental strand, 15333058 - 15332959
Alignment:
Q  132 gtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatgta 231  Q
    |||| ||||||||||| ||| |||| ||||||||| |||| ||||  ||| ||||||| | | ||||||||||| ||||||||| |||||||||||||||    
T  15333058 gttttaaaatacatgtcgcaattttacaatgtgcactattcacatagcttgctttgaccaaattttttaactaatatataaatacaaatgttagcatgta 15332959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 129 - 231
Target Start/End: Original strand, 25527413 - 25527513
Alignment:
Q  129 tccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcat 228  Q
    |||||||| |||||||||| ||||||||||||||||   |||| ||||||||||||| ||| ||| ||||||||| | ||||||||| |||| ||| |||    
T  25527413 tccgtttcgaaatacatgtcgcatttttgcaatgtg--atattcacatgacttacttcgaccatattttttaactgatatataaatacaaatattaacat 25527510  T
Q  229 gta 231  Q
    |||    
T  25527511 gta 25527513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 124 - 238
Target Start/End: Complemental strand, 15568194 - 15568081
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 223  Q
    ||||||| ||||||||||| |||| ||| |||| |||||||||||||||||||   ||| |||||  ||| ||||||||||| ||||||||| |||||||    
T  15568194 ctccatctgtttcaaaata-atgtcgcaattttacaatgtgcattatttacatagtttaatttgatcatattttttaactaatatataaatacaaatgtt 15568096  T
Q  224 agcatgtacgatatt 238  Q
    | | |||| ||||||    
T  15568095 accgtgtaagatatt 15568081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 129 - 235
Target Start/End: Complemental strand, 41751665 - 41751559
Alignment:
Q  129 tccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcat 228  Q
    |||||||| ||||| ||||| || |||| |||| || | ||||||||| || ||||||||  ||| ||||||||||| ||||||||| ||||||||||||    
T  41751665 tccgtttcgaaatatatgttacaattttacaatatgtaatatttacataacatactttgatcatattttttaactaatatataaatacaaatgttagcat 41751566  T
Q  229 gtacgat 235  Q
     ||||||    
T  41751565 ttacgat 41751559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 129 - 199
Target Start/End: Original strand, 42049788 - 42049858
Alignment:
Q  129 tccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatacttttt 199  Q
    |||||| |||||||||||  ||||||||||||||||||  ||||||||||| ||||||||||||| |||||    
T  42049788 tccgttccaaaatacatgccgcatttttgcaatgtgcacaatttacatgacatactttgactatatttttt 42049858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 129 - 231
Target Start/End: Original strand, 54507648 - 54507750
Alignment:
Q  129 tccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcat 228  Q
    ||||||||||||||||| |   ||||||||||| |||| |||| || ||||||| ||||| ||||||||||||||||  |||||||| | || |||||||    
T  54507648 tccgtttcaaaatacatatccaatttttgcaatatgcactattcacttgacttattttgattatactttttaactaatgtataaatacagatattagcat 54507747  T
Q  229 gta 231  Q
    |||    
T  54507748 gta 54507750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 124 - 192
Target Start/End: Original strand, 32220865 - 32220933
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactat 192  Q
    |||||||||||| ||||||||||||  |||||||||||||| | |||| || |||||||||||||||||    
T  32220865 ctccatccgttttaaaatacatgtttaatttttgcaatgtgtactattcacttgacttactttgactat 32220933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 163 - 238
Target Start/End: Original strand, 17643772 - 17643847
Alignment:
Q  163 tgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatgtacgatatt 238  Q
    ||||||||| |||| | ||||| |||||||| ||||||||||| || |||||| ||||||||||||||| ||||||    
T  17643772 tgcattattaacataatttactgtgactatattttttaactaatatgtaaatacaaatgttagcatgtaagatatt 17643847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 129 - 203
Target Start/End: Complemental strand, 43467997 - 43467923
Alignment:
Q  129 tccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaact 203  Q
    ||||||||||||||||||    |||||||||||||| | |||| || |||||||||||||| |||||||||||||    
T  43467997 tccgtttcaaaatacatgaccaatttttgcaatgtgtactattcacttgacttactttgaccatactttttaact 43467923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 124 - 237
Target Start/End: Complemental strand, 15664204 - 15664092
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 223  Q
    ||||||| |||||||||||  ||| ||| |||| |||||||||||||||||||  |||| |||||  ||| ||||||| ||| ||||||||| |||||||    
T  15664204 ctccatcagtttcaaaatag-tgtcgcaattttacaatgtgcattatttacatagcttaatttgatcatattttttaattaatatataaatacaaatgtt 15664106  T
Q  224 agcatgtacgatat 237  Q
    |  ||||| |||||    
T  15664105 actatgtaagatat 15664092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 129 - 213
Target Start/End: Original strand, 22782273 - 22782357
Alignment:
Q  129 tccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaa 213  Q
    ||||||||||| ||||||| ||| ||||  |||||||| |||| ||||  |||||||||||| || ||||||||||| |||||||    
T  22782273 tccgtttcaaactacatgtcgcaattttttaatgtgcactattcacatagcttactttgactctattttttaactaaaatataaa 22782357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 129 - 213
Target Start/End: Original strand, 22786637 - 22786721
Alignment:
Q  129 tccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaa 213  Q
    ||||||||||| ||||||| ||| ||||  |||||||| |||| ||||  |||||||||||| || ||||||||||| |||||||    
T  22786637 tccgtttcaaactacatgtcgcaattttttaatgtgcactattcacatagcttactttgactctattttttaactaatatataaa 22786721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 163 - 231
Target Start/End: Original strand, 30213845 - 30213913
Alignment:
Q  163 tgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatgta 231  Q
    |||| |||| || ||||||| |||||| ||||||||||||||| ||||||||| |||| ||||||||||    
T  30213845 tgcactattcacttgacttattttgaccatactttttaactaatatataaatacaaatattagcatgta 30213913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 124 - 215
Target Start/End: Original strand, 37766049 - 37766145
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttac-----tttgactatactttttaactaacatataaata 215  Q
    |||||||| |||||||||||| ||  ||| ||||||||||||| |||| |||||| ||||     ||||||| ||||||||||||||||||| ||||    
T  37766049 ctccatccatttcaaaatacacgtctcatatttgcaatgtgcactattaacatgatttactataatttgactgtactttttaactaacatatgaata 37766145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 124 - 231
Target Start/End: Original strand, 36227547 - 36227654
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 223  Q
    |||| ||||||| ||||| ||||||  |||||||||||| ||| |||| |  |||||||||||||| ||| |||| || |||  |||||||| |||| ||    
T  36227547 ctccctccgttttaaaatgcatgttcaatttttgcaatgcgcactattcatttgacttactttgaccatatttttcaattaatgtataaatacaaatatt 36227646  T
Q  224 agcatgta 231  Q
    ||||||||    
T  36227647 agcatgta 36227654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 161 - 227
Target Start/End: Complemental strand, 27813511 - 27813445
Alignment:
Q  161 tgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagca 227  Q
    |||||| |||| ||||  |||| |||||||||| ||||||||||| ||||||||| |||||||||||    
T  27813511 tgtgcactattcacatagcttattttgactatattttttaactaatatataaatacaaatgttagca 27813445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 130 - 231
Target Start/End: Original strand, 6910342 - 6910443
Alignment:
Q  130 ccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatg 229  Q
    ||||||||||||||||||   | |||| |||||| || |||| || ||||||||||| || ||| |||||||||||  |||||||| |||| ||| ||||    
T  6910342 ccgtttcaaaatacatgtccaacttttacaatgtacactattcacttgacttactttaaccatattttttaactaatgtataaatacaaatattaacatg 6910441  T
Q  230 ta 231  Q
    ||    
T  6910442 ta 6910443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 228
Target Start/End: Original strand, 30057310 - 30057405
Alignment:
Q  133 tttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcat 228  Q
    ||||||||||||||| | |||||  ||| || ||||||| |||| || |||||| || ||| ||||||||||| |||||||   ||||||||||||    
T  30057310 tttcaaaatacatgtagtattttgacaacgttcattattcacataacatactttaaccatattttttaactaatatataaaagcaaatgttagcat 30057405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 168
Target Start/End: Complemental strand, 27813858 - 27813817
Alignment:
Q  127 catccgtttcaaaatacatgttgcatttttgcaatgtgcatt 168  Q
    |||| |||||||||||||||||||| |||| |||||||||||    
T  27813858 catctgtttcaaaatacatgttgcaattttacaatgtgcatt 27813817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 238
Target Start/End: Complemental strand, 33128125 - 33128065
Alignment:
Q  178 acttactttgactatactttttaactaacatataaatataaatgttagcatgtacgatatt 238  Q
    ||||| |||||  ||||||||||||||| | |||||||||||| ||| |||||| ||||||    
T  33128125 acttattttgatcatactttttaactaatacataaatataaatattaacatgtaagatatt 33128065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 215
Target Start/End: Complemental strand, 42469722 - 42469635
Alignment:
Q  127 catccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaata 215  Q
    ||||||||| ||||||||||| |||||||| ||||| |||||||| || ||||||| ||| ||  || ||||||| ||| || ||||||    
T  42469722 catccgttt-aaaatacatgtcgcattttttcaatgcgcattattcacgtgacttaatttaaccgtattttttaattaatatgtaaata 42469635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 73; Significance: 2e-33; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 131 - 231
Target Start/End: Original strand, 7799856 - 7799956
Alignment:
Q  131 cgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatgt 230  Q
    ||||||||||||||||| |||||||||||||||||| |||| |||||||||||||||||  |||||||||||||| ||||||||| ||||||||||||||    
T  7799856 cgtttcaaaatacatgtcgcatttttgcaatgtgcactattcacatgacttactttgaccctactttttaactaatatataaatacaaatgttagcatgt 7799955  T
Q  231 a 231  Q
    |    
T  7799956 a 7799956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 124 - 231
Target Start/End: Original strand, 7608051 - 7608158
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 223  Q
    ||||||||||||||||||||||||   |||||||||||||||| |||| || |||||||||||||| ||||||||||||||| ||||||||| |||| ||    
T  7608051 ctccatccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatatt 7608150  T
Q  224 agcatgta 231  Q
    ||||||||    
T  7608151 agcatgta 7608158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 122 - 231
Target Start/End: Original strand, 5404996 - 5405105
Alignment:
Q  122 tgctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatg 221  Q
    |||||| |||||||||||||||||||   |||||||||||||||| |||| || |||||||||||||| ||||||||||||||| ||||||||| ||||     
T  5404996 tgctccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaata 5405095  T
Q  222 ttagcatgta 231  Q
    ||||||||||    
T  5405096 ttagcatgta 5405105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 128 - 231
Target Start/End: Original strand, 6223072 - 6223175
Alignment:
Q  128 atccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagca 227  Q
    |||||||||||||||||||||  |||||||||||||||| |||| || |||||||||||||| ||| ||||||||||| ||||||||| |||| ||||||    
T  6223072 atccgtttcaaaatacatgttcaatttttgcaatgtgcactattcacttgacttactttgaccatattttttaactaatatataaatacaaatattagca 6223171  T
Q  228 tgta 231  Q
    ||||    
T  6223172 tgta 6223175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 124 - 231
Target Start/End: Complemental strand, 8042282 - 8042175
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 223  Q
    |||| |||||||||||||||||||   |||||||||||||||| |||| || |||||||||||||| ||||||||||||||| ||||||||| |||| ||    
T  8042282 ctccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatatt 8042183  T
Q  224 agcatgta 231  Q
    ||||||||    
T  8042182 agcatgta 8042175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 124 - 231
Target Start/End: Complemental strand, 19141326 - 19141219
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 223  Q
    |||| |||||||||||||||||||   |||||||||||||||| |||| || |||||||||||||| ||||||||||||||| ||||||||| |||| ||    
T  19141326 ctccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatatt 19141227  T
Q  224 agcatgta 231  Q
    ||||||||    
T  19141226 agcatgta 19141219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 124 - 241
Target Start/End: Original strand, 39358148 - 39358265
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 223  Q
    |||| |||||||||||||||||||   |||||||||||||||| |||| || |||||||||||||| |||||||||||||||  |||||||| |||| ||    
T  39358148 ctccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatgtataaatacaaatatt 39358247  T
Q  224 agcatgtacgatattctt 241  Q
    |||||||| ||| |||||    
T  39358248 agcatgtaagatgttctt 39358265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 137 - 231
Target Start/End: Original strand, 16865069 - 16865163
Alignment:
Q  137 aaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatgta 231  Q
    ||||||||||| |||||||| |||| | || |||| | ||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||    
T  16865069 aaaatacatgtcgcatttttacaatatacaatattcatatgacttactttgacgatactttttaactaacatataaatacaaatgttagcatgta 16865163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 124 - 231
Target Start/End: Complemental strand, 2183217 - 2183110
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 223  Q
    |||| |||||||||||||||||||   |||||||||||||||| |||| || |||||||||||||| |||||||||||||||  ||| |||| |||| ||    
T  2183217 ctccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatgtatgaatacaaatatt 2183118  T
Q  224 agcatgta 231  Q
    ||||||||    
T  2183117 agcatgta 2183110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 133 - 231
Target Start/End: Complemental strand, 43444791 - 43444693
Alignment:
Q  133 tttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatgta 231  Q
    ||||||||||||||| ||| |||| |||||||||||||| |||| | || ||||||| ||| ||||||||||| ||||||||| |||||||||||||||    
T  43444791 tttcaaaatacatgtcgcaattttacaatgtgcattattcacataattttctttgaccatattttttaactaatatataaatacaaatgttagcatgta 43444693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 129 - 231
Target Start/End: Original strand, 44365164 - 44365266
Alignment:
Q  129 tccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcat 228  Q
    |||||||||||||||||||   ||||||||||| |||| |||| || |||||||||||||| |||||||||||||||  |||||||| |||| |||||||    
T  44365164 tccgtttcaaaatacatgtccaatttttgcaatatgcactattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcat 44365263  T
Q  229 gta 231  Q
    |||    
T  44365264 gta 44365266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 132 - 228
Target Start/End: Original strand, 11931701 - 11931797
Alignment:
Q  132 gtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcat 228  Q
    |||||||||||||||| ||| |||| |||| ||||||||| | || |||||||||||| ||| ||||||||||| ||||||||| ||||||||||||    
T  11931701 gtttcaaaatacatgtcgcaattttacaatatgcattattcatataacttactttgaccatattttttaactaatatataaatacaaatgttagcat 11931797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 129 - 220
Target Start/End: Original strand, 32774598 - 32774689
Alignment:
Q  129 tccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaat 220  Q
    ||||||||||||||||||||  | ||||  |||||||| ||||||| |||||||||||||| ||||||||||||||| ||||| ||||||||    
T  32774598 tccgtttcaaaatacatgttcaagttttataatgtgcactatttacttgacttactttgaccatactttttaactaatatatacatataaat 32774689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 129 - 231
Target Start/End: Original strand, 19262687 - 19262789
Alignment:
Q  129 tccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcat 228  Q
    |||||||||||||||||||   |||||| ||||||||| ||||||  | |||||||||||| ||| ||||||||||| ||||||||| |||| |||||||    
T  19262687 tccgtttcaaaatacatgtccaattttttcaatgtgcactatttatttaacttactttgaccatattttttaactaatatataaatacaaatattagcat 19262786  T
Q  229 gta 231  Q
    |||    
T  19262787 gta 19262789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 124 - 229
Target Start/End: Complemental strand, 9007044 - 9006939
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 223  Q
    |||||||| ||||||||||||||| ||| |||| |||||||||||||| |  |  ||||||||||| ||| |||||||||||  |||||||| |||||||    
T  9007044 ctccatccatttcaaaatacatgtcgcaattttacaatgtgcattattcatgtagcttactttgaccatattttttaactaatttataaatacaaatgtt 9006945  T
Q  224 agcatg 229  Q
    ||||||    
T  9006944 agcatg 9006939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 127 - 231
Target Start/End: Original strand, 24251965 - 24252069
Alignment:
Q  127 catccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagc 226  Q
    ||||||||||||||||||| |  || |||| |||| || |||||| |||| ||||| |||||| ||| ||||||||||| ||||||||| ||||||||||    
T  24251965 catccgtttcaaaatacatttcacaattttacaatatgtattattcacataacttattttgaccatattttttaactaatatataaatacaaatgttagc 24252064  T
Q  227 atgta 231  Q
    |||||    
T  24252065 atgta 24252069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 11841841 - 11841746
Alignment:
Q  136 caaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatgta 231  Q
    ||||||||||||   |||||||||||||||| |||| |  |||||||||||||| |||||||||||||||  |||||||| |||| ||||||||||    
T  11841841 caaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgta 11841746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 129 - 204
Target Start/End: Original strand, 13598449 - 13598523
Alignment:
Q  129 tccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaacta 204  Q
    ||||||| |||||| ||||||||||||| ||||||||| |||| | ||||||||||||||| ||||||||||||||    
T  13598449 tccgttttaaaatatatgttgcattttt-caatgtgcactattcatatgacttactttgaccatactttttaacta 13598523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 124 - 228
Target Start/End: Complemental strand, 22839187 - 22839083
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 223  Q
    |||| ||| |||||||||| || || ||  ||||||||||||| |||| |||| |||||||||||| ||| ||||||||||  ||||||||  |||||||    
T  22839187 ctccttccatttcaaaatatattttacaaatttgcaatgtgcactattcacataacttactttgaccatattttttaactagtatataaattaaaatgtt 22839088  T
Q  224 agcat 228  Q
    |||||    
T  22839087 agcat 22839083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 127 - 231
Target Start/End: Original strand, 38291957 - 38292061
Alignment:
Q  127 catccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagc 226  Q
    |||||||||| ||||||||  |||| |||| |||  ||||||||| | || |||||||||||| ||| ||||||||||  ||||||||| |||||||| |    
T  38291957 catccgtttccaaatacatagtgcaattttacaacatgcattattcagataacttactttgaccatattttttaactagtatataaatacaaatgttaac 38292056  T
Q  227 atgta 231  Q
    |||||    
T  38292057 atgta 38292061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 133 - 220
Target Start/End: Original strand, 33607387 - 33607474
Alignment:
Q  133 tttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaat 220  Q
    |||||||||||||||   |||||| ||||||||| |||| |  ||||||||||||| ||||||||||||||||  |||||||| ||||    
T  33607387 tttcaaaatacatgtccaatttttacaatgtgcactattcatttgacttactttgattatactttttaactaatgtataaatacaaat 33607474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 128 - 231
Target Start/End: Original strand, 36072180 - 36072283
Alignment:
Q  128 atccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagca 227  Q
    |||| |||||||||||||||   |||||| |||| |||| |||| |  |||||||||||||  ||| |||||||||||  ||||||||||||| ||||||    
T  36072180 atccatttcaaaatacatgtccaatttttacaatatgcactattcatttgacttactttgatcatattttttaactaatgtataaatataaatattagca 36072279  T
Q  228 tgta 231  Q
    ||||    
T  36072280 tgta 36072283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 136 - 225
Target Start/End: Complemental strand, 13117572 - 13117483
Alignment:
Q  136 caaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttag 225  Q
    ||||||||||||| |||| || | ||||||| | |||| || |||||||||||| ||| ||||||||| | |||||||||||||| ||||    
T  13117572 caaaatacatgttacattcttaccatgtgcactgtttatataacttactttgaccatattttttaactgatatataaatataaatattag 13117483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 127 - 244
Target Start/End: Complemental strand, 24093794 - 24093676
Alignment:
Q  127 catccgtttcaaaatacatgttgcattttt-gcaatgtgcattatttacatgacttactttgactatacttttt-aactaacatataaatataaatgtta 224  Q
    ||||| ||||||||||||||| | |||||| || ||||||  ||||   |||| |||||||||| ||||||||| ||||||||||| |||| ||||||||    
T  24093794 catccatttcaaaatacatgtcgtattttttgcgatgtgcgctattcgtatgatttactttgaccatacttttttaactaacatat-aatacaaatgtta 24093696  T
Q  225 gcatgtacgatattcttcga 244  Q
    ||||||| ||| || |||||    
T  24093695 gcatgtaagatgttgttcga 24093676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 220
Target Start/End: Original strand, 44644905 - 44644968
Alignment:
Q  157 gcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaat 220  Q
    |||||||||| |||| |  || ||||||||||| ||||||||||||||| ||||||||||||||    
T  44644905 gcaatgtgcactattcaattgtcttactttgaccatactttttaactaatatataaatataaat 44644968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 125 - 231
Target Start/End: Complemental strand, 19166041 - 19165936
Alignment:
Q  125 tccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtta 224  Q
    ||||||||||| |||||| |||| || ||||||||||||||| |||| |||||||||  |||||  ||  ||||||| ||| ||||||||| || |||||    
T  19166041 tccatccgttttaaaatatatgtcgcgtttttgcaatgtgca-tattcacatgacttgttttgatcatggtttttaattaatatataaatacaattgtta 19165943  T
Q  225 gcatgta 231  Q
     ||||||    
T  19165942 tcatgta 19165936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 229
Target Start/End: Original strand, 42133763 - 42133859
Alignment:
Q  133 tttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatg 229  Q
    ||||||||||||||| | | ||||  |||||||| |||| | ||   |||||||||  ||| ||||||||||| ||||||||| |||||||||||||    
T  42133763 tttcaaaatacatgtcgtaattttaaaatgtgcactattcatatagtttactttgatcatattttttaactaatatataaatacaaatgttagcatg 42133859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 219
Target Start/End: Original strand, 30548839 - 30548929
Alignment:
Q  129 tccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaa 219  Q
    ||||||||||| |||||||  || |||  |||| |||||||||||||  | |||| ||||| ||| |||||||| || |||||||||||||    
T  30548839 tccgtttcaaattacatgtcacaatttaacaatatgcattatttacacaaattacgttgaccatattttttaaccaatatataaatataaa 30548929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 231
Target Start/End: Complemental strand, 9172352 - 9172299
Alignment:
Q  178 acttactttgactatactttttaactaacatataaatataaatgttagcatgta 231  Q
    |||||||||||| ||| |||||||||||  |||||||| ||| |||||||||||    
T  9172352 acttactttgaccatattttttaactaatgtataaatacaaaagttagcatgta 9172299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 220
Target Start/End: Complemental strand, 31904137 - 31904044
Alignment:
Q  127 catccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaat 220  Q
    ||||||||| ||||||||| | ||| ||||  | ||| || |||| ||||  |||||| |||| ||| ||||||||||| ||||||||||||||    
T  31904137 catccgttttaaaatacatatcgcaattttatactgtacactattcacatagcttactctgaccatattttttaactaatatataaatataaat 31904044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 214
Target Start/End: Complemental strand, 9553967 - 9553890
Alignment:
Q  133 tttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaat 214  Q
    ||||||||||||||| |||||||| |||||| ||||||    || ||||||||||||   | ||||||||||| ||||||||    
T  9553967 tttcaaaatacatgtcgcatttttacaatgtacattat----ataacttactttgaccgcattttttaactaatatataaat 9553890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 220
Target Start/End: Complemental strand, 36177809 - 36177741
Alignment:
Q  153 ttttgcaatgtgcattatttacatgacttactttgactatacttttt-aactaacatataaatataaat 220  Q
    |||||||||| |||||||| |||||| ||| |||||| ||| ||||| |||||| ||||||||| ||||    
T  36177809 ttttgcaatgcgcattattcacatgatttattttgaccatatttttttaactaatatataaataaaaat 36177741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 231
Target Start/End: Complemental strand, 44563258 - 44563150
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatacttttt-aactaacatataaatataaatgt 222  Q
    |||||||||||| ||| ||||||| ||| ||||  ||| |||| |||| | || |||||||||||  ||| ||||| || ||| ||||||||| | ||||    
T  44563258 ctccatccgttttaaattacatgtcgcaattttataatatgcactattcatataacttactttgatcatatttttttaattaatatataaatacatatgt 44563159  T
Q  223 tagcatgta 231  Q
    |||||||||    
T  44563158 tagcatgta 44563150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 72; Significance: 7e-33; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 124 - 231
Target Start/End: Original strand, 6563228 - 6563335
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 223  Q
    |||| ||||||||||||||||||||  |||||||||||||||| ||||||| |||||||||||||| ||||||||||||||| ||||||||| |||| ||    
T  6563228 ctccctccgtttcaaaatacatgttcaatttttgcaatgtgcactatttacttgacttactttgaccatactttttaactaatatataaatacaaatatt 6563327  T
Q  224 agcatgta 231  Q
    ||||||||    
T  6563328 agcatgta 6563335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 124 - 231
Target Start/End: Complemental strand, 24624201 - 24624094
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 223  Q
    |||| ||||||||||||||||||||  |||||||||||||||| |||| || |||||||||||||| ||||||||||||||| ||||||||| |||| ||    
T  24624201 ctccctccgtttcaaaatacatgttcaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatatt 24624102  T
Q  224 agcatgta 231  Q
    ||||||||    
T  24624101 agcatgta 24624094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 124 - 231
Target Start/End: Original strand, 4147933 - 4148040
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 223  Q
    |||| |||||||||||||||||||   ||||||||||||||||||||| || |||||||||||||| |||||||||||||||  |||||||| |||| ||    
T  4147933 ctccctccgtttcaaaatacatgtccaatttttgcaatgtgcattattcacttgacttactttgaccatactttttaactaatgtataaatacaaatatt 4148032  T
Q  224 agcatgta 231  Q
    ||||||||    
T  4148033 agcatgta 4148040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 129 - 244
Target Start/End: Original strand, 4440857 - 4440972
Alignment:
Q  129 tccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcat 228  Q
    |||||||||||||| |||||||||||||| |||||||| |||| | || |||||||||||| ||||||||||  ||||||||||||| ||||||||||||    
T  4440857 tccgtttcaaaatatatgttgcatttttgtaatgtgcactattcatataacttactttgaccatactttttaggtaacatataaatacaaatgttagcat 4440956  T
Q  229 gtacgatattcttcga 244  Q
    ||| ||| || |||||    
T  4440957 gtaagatgttgttcga 4440972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 124 - 231
Target Start/End: Complemental strand, 17257911 - 17257804
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 223  Q
    ||||||| ||||||||||||||||   ||||||||||||||||||||| || |||||||||||||| |||||||||||||||  || ||||| |||| ||    
T  17257911 ctccatctgtttcaaaatacatgtctaatttttgcaatgtgcattattcacttgacttactttgaccatactttttaactaatgtacaaatacaaatatt 17257812  T
Q  224 agcatgta 231  Q
    ||||||||    
T  17257811 agcatgta 17257804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 124 - 231
Target Start/End: Complemental strand, 19088218 - 19088111
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 223  Q
    |||| |||||||||||||||||||   |||||||||||||||| |||| || |||||||||||||| | ||||||||||||| ||||||||| |||| ||    
T  19088218 ctccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccaaactttttaactaatatataaatacaaatatt 19088119  T
Q  224 agcatgta 231  Q
    ||||||||    
T  19088118 agcatgta 19088111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 124 - 231
Target Start/End: Complemental strand, 32414939 - 32414832
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 223  Q
    |||| |||||||||||||||||||   |||||| ||||||||| |||| || |||||||||||||| ||||||||||||||| ||||||||| |||| ||    
T  32414939 ctccctccgtttcaaaatacatgtccaattttttcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatatt 32414840  T
Q  224 agcatgta 231  Q
    ||||||||    
T  32414839 agcatgta 32414832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 124 - 231
Target Start/End: Complemental strand, 17214044 - 17213937
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 223  Q
    |||| ||| |||||||||||||||   |||||||||||||||| |||| |  ||||||||||||||||||||||||||||||  |||||||| |||| ||    
T  17214044 ctccctccatttcaaaatacatgtctaatttttgcaatgtgcactattcatttgacttactttgactatactttttaactaatttataaatacaaatatt 17213945  T
Q  224 agcatgta 231  Q
    ||||||||    
T  17213944 agcatgta 17213937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 124 - 231
Target Start/End: Original strand, 29790208 - 29790315
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 223  Q
    ||||||| |||||||||||||||| ||| |||||||||||  | |||| ||||||||||||| ||| ||| ||||||||||| ||||||||| |||| ||    
T  29790208 ctccatctgtttcaaaatacatgtcgcaattttgcaatgtatactattcacatgacttacttggaccataatttttaactaatatataaatacaaatatt 29790307  T
Q  224 agcatgta 231  Q
    ||||||||    
T  29790308 agcatgta 29790315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 129 - 231
Target Start/End: Complemental strand, 15383185 - 15383083
Alignment:
Q  129 tccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcat 228  Q
    |||||||||||||||||||   ||||||||||||||||||||| |  ||||||||||| || |||||||||||||||  |||||||| |||| |||||||    
T  15383185 tccgtttcaaaatacatgtccaatttttgcaatgtgcattattcatttgacttactttaaccatactttttaactaatctataaatacaaatattagcat 15383086  T
Q  229 gta 231  Q
    |||    
T  15383085 gta 15383083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 129 - 231
Target Start/End: Original strand, 22054779 - 22054881
Alignment:
Q  129 tccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcat 228  Q
    |||||||||||||||||||   ||||||||||| |||| |||| || |||||||||||||| |||||||||||||||  |||||||| |||| |||||||    
T  22054779 tccgtttcaaaatacatgtccaatttttgcaatatgcactattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcat 22054878  T
Q  229 gta 231  Q
    |||    
T  22054879 gta 22054881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 130 - 231
Target Start/End: Complemental strand, 31569280 - 31569179
Alignment:
Q  130 ccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatg 229  Q
    ||||||||||||||||||   ||||||||||||||||||||| || |||||||||||||||||||||||| | |||  |||||||| |||| |||| |||    
T  31569280 ccgtttcaaaatacatgtccaatttttgcaatgtgcattattcacttgacttactttgactatacttttttattaatgtataaatacaaatattagaatg 31569181  T
Q  230 ta 231  Q
    ||    
T  31569180 ta 31569179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 124 - 231
Target Start/End: Complemental strand, 18668948 - 18668841
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 223  Q
    |||| |||||||||||||||||||   |||||||||||||||| |||| || |||||| ||||||| ||| |||||||||||  |||||||| |||| ||    
T  18668948 ctccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttgctttgaccatattttttaactaatgtataaatacaaatatt 18668849  T
Q  224 agcatgta 231  Q
    ||||||||    
T  18668848 agcatgta 18668841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 132 - 231
Target Start/End: Complemental strand, 20226550 - 20226451
Alignment:
Q  132 gtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatgta 231  Q
    ||||||||||||||||   |||||||||||||||| |||| |  |||||||||||||| |||||||||||||||  |||||||| |||| ||||||||||    
T  20226550 gtttcaaaatacatgtacaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgta 20226451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 132 - 231
Target Start/End: Complemental strand, 22120534 - 22120435
Alignment:
Q  132 gtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatgta 231  Q
    ||||||||||||||||   |||||||||||||||| |||| |  |||||||||||||| |||||||||||||||  |||||||| |||| ||||||||||    
T  22120534 gtttcaaaatacatgtacaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgta 22120435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 124 - 215
Target Start/End: Complemental strand, 25476068 - 25475977
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaata 215  Q
    |||| |||||||||||||||||||   ||||||||||||||||||||| || ||||||||||||||  ||||||||||||||  ||||||||    
T  25476068 ctccctccgtttcaaaatacatgtccaatttttgcaatgtgcattattcacttgacttactttgaccttactttttaactaatgtataaata 25475977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 133 - 231
Target Start/End: Original strand, 28477764 - 28477862
Alignment:
Q  133 tttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatgta 231  Q
    |||||||||||||||  || |||||||||||| | |||| ||||||||| ||||||| ||| ||||||||||| ||||||||| |||| ||||||||||    
T  28477764 tttcaaaatacatgtcacaattttgcaatgtgtactattcacatgacttgctttgaccataatttttaactaatatataaatacaaatattagcatgta 28477862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 127 - 231
Target Start/End: Original strand, 15337493 - 15337597
Alignment:
Q  127 catccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagc 226  Q
    |||| |||||||||||||| |  || |||| |||| ||||||||| |||| |||||||||||| ||| ||||||||||| ||||||||| |||| |||||    
T  15337493 catctgtttcaaaatacatttcacaattttacaatatgcattattcacataacttactttgaccatattttttaactaatatataaatacaaatattagc 15337592  T
Q  227 atgta 231  Q
    |||||    
T  15337593 atgta 15337597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 124 - 231
Target Start/End: Original strand, 32671818 - 32671925
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 223  Q
    |||| |||||||||||||||||||   |||||||||||||||| |||| || | |||||||||||| ||| |||||||||||  |||||||| |||| ||    
T  32671818 ctccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttcacttactttgaccataatttttaactaatgtataaatacaaatatt 32671917  T
Q  224 agcatgta 231  Q
    ||| ||||    
T  32671918 agcgtgta 32671925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 133 - 231
Target Start/End: Original strand, 29693894 - 29693992
Alignment:
Q  133 tttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatgta 231  Q
    |||||||||||||||  || |||||||||||| | |||| ||||||||| ||||||| ||| ||||||||||| ||||||||| ||||  |||||||||    
T  29693894 tttcaaaatacatgtcacaattttgcaatgtgtactattcacatgacttgctttgaccataatttttaactaatatataaatacaaatactagcatgta 29693992  T

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Target: chr6; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 129 - 205
Target Start/End: Complemental strand, 3989518 - 3989442
Alignment:
Q  129 tccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaa 205  Q
    |||||| ||||||||||||   |||||||||||||||| |||| || |||||||||||||| |||||||||||||||    
T  3989518 tccgttacaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaa 3989442  T

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Target: chr6; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 131 - 231
Target Start/End: Original strand, 17155158 - 17155258
Alignment:
Q  131 cgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatgt 230  Q
    ||||||||||||||||| |  |||||  ||||| || |||| ||||||| ||||||||  ||||||  ||||||||||||||||| ||||||||||||||    
T  17155158 cgtttcaaaatacatgtcgtttttttaaaatgttcactattcacatgacctactttgatcatacttcataactaacatataaatacaaatgttagcatgt 17155257  T
Q  231 a 231  Q
    |    
T  17155258 a 17155258  T

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Target: chr6; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 124 - 215
Target Start/End: Original strand, 10520470 - 10520561
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaata 215  Q
    |||| ||||||||||||||||||||  |||||||||||||| |||||| |  |||||||||||||| |||| | ||||||||  ||||||||    
T  10520470 ctccttccgtttcaaaatacatgttcaatttttgcaatgtgtattattcatttgacttactttgaccatacctattaactaatgtataaata 10520561  T

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Target: chr6; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 125 - 231
Target Start/End: Original strand, 5495252 - 5495358
Alignment:
Q  125 tccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtta 224  Q
    ||||||||||| |||||| |||| ||| |||| | |||||||||||||||||   ||| |||||  ||  ||||||||||| ||||||||| ||||||||    
T  5495252 tccatccgttttaaaatatatgtcgcaattttacgatgtgcattatttacatagtttattttgatcatgttttttaactaatatataaatacaaatgtta 5495351  T
Q  225 gcatgta 231  Q
    |||||||    
T  5495352 gcatgta 5495358  T

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Target: chr6; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 129 - 231
Target Start/End: Original strand, 31869715 - 31869817
Alignment:
Q  129 tccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcat 228  Q
    ||||||||||||||||||| ||  |||| |||||| || ||||  ||| | |||||||||| ||  ||||||||||| ||||||||| ||||||||||||    
T  31869715 tccgtttcaaaatacatgtcgcgattttacaatgtacactattcccataatttactttgaccattttttttaactaatatataaatacaaatgttagcat 31869814  T
Q  229 gta 231  Q
    |||    
T  31869815 gta 31869817  T

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Target: chr6; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 159 - 231
Target Start/End: Original strand, 2360027 - 2360099
Alignment:
Q  159 aatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatgta 231  Q
    |||||| | |||||| || | |||||||||||||| ||||||||||| ||||||||| |||||||||||||||    
T  2360027 aatgtgtactatttatataatttactttgactataatttttaactaatatataaataaaaatgttagcatgta 2360099  T

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Target: chr6; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 152 - 231
Target Start/End: Original strand, 1040854 - 1040933
Alignment:
Q  152 tttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatgta 231  Q
    ||||||||||||||| |||| || ||| |||||||||| |||||||||||||||  |||||||| |||| ||| ||||||    
T  1040854 tttttgcaatgtgcactattcacttgatttactttgaccatactttttaactaatgtataaatacaaatattaacatgta 1040933  T

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Target: chr6; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 131 - 231
Target Start/End: Complemental strand, 14214166 - 14214066
Alignment:
Q  131 cgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatgt 230  Q
    ||||| ||||||||||| ||| ||||  ||||||||||||| |   |||||  ||||||  || |||||||| || ||||||||||||||||||||||||    
T  14214166 cgttttaaaatacatgtcgcaattttataatgtgcattattcatccgacttgttttgaccgtattttttaaccaatatataaatataaatgttagcatgt 14214067  T
Q  231 a 231  Q
    |    
T  14214066 a 14214066  T

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Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 204
Target Start/End: Complemental strand, 21540880 - 21540809
Alignment:
Q  133 tttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaacta 204  Q
    ||||||||||||||||  |||||| ||||||||| |||| |  |||||||||||||| |||||||| |||||    
T  21540880 tttcaaaatacatgtttaatttttacaatgtgcactattcatttgacttactttgaccatacttttaaacta 21540809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 130 - 231
Target Start/End: Complemental strand, 3623963 - 3623863
Alignment:
Q  130 ccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatg 229  Q
    |||||| |||||| |||| ||| |||| |||| | ||||||| | ||   |||||||||| ||| ||||||||||| ||||||||| |||||||||||||    
T  3623963 ccgttttaaaatatatgtcgcagttttacaatatacattattcatatagtttactttgaccata-tttttaactaatatataaatacaaatgttagcatg 3623865  T
Q  230 ta 231  Q
    ||    
T  3623864 ta 3623863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 177 - 238
Target Start/End: Original strand, 12226030 - 12226091
Alignment:
Q  177 gacttactttgactatactttttaactaacatataaatataaatgttagcatgtacgatatt 238  Q
    |||||| |||||  |||||||||||||||  ||||||||||||| |||||||||| ||||||    
T  12226030 gacttattttgatcatactttttaactaatgtataaatataaatattagcatgtaagatatt 12226091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 220
Target Start/End: Complemental strand, 20437274 - 20437177
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactata-ctttttaactaacatataaatataaat 220  Q
    ||||||||||||  ||||||||||   |||||||||||||||| |||| || |||||||||||||  |||  |||||||||||  |||||||| ||||    
T  20437274 ctccatccgttttcaaatacatgtctaatttttgcaatgtgcactattcacttgacttactttgatcatatttttttaactaatgtataaatacaaat 20437177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 231
Target Start/End: Complemental strand, 10298798 - 10298726
Alignment:
Q  159 aatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatgta 231  Q
    |||||||| |||| ||||  |||| |||||| ||| ||||| ||||| ||||||||| |||||||||||||||    
T  10298798 aatgtgcactattcacatagcttaatttgaccatattttttcactaatatataaatacaaatgttagcatgta 10298726  T

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Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 231
Target Start/End: Complemental strand, 24955629 - 24955549
Alignment:
Q  151 atttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatgta 231  Q
    ||||||| ||||||||||||| || ||||||| |||||  ||| |||||||||||   ||||||| |||| ||||||||||    
T  24955629 atttttgtaatgtgcattattcacttgacttattttgatcatattttttaactaatgaataaatacaaatattagcatgta 24955549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 153 - 238
Target Start/End: Complemental strand, 19240823 - 19240738
Alignment:
Q  153 ttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatgtacgatatt 238  Q
    |||||||||||  | |||| |||| ||||| |||||| ||| ||||||||||| ||||||||| |||| || ||| ||| ||||||    
T  19240823 ttttgcaatgtatactattcacataacttattttgaccatattttttaactaatatataaatacaaatatttgcaagtaagatatt 19240738  T

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Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 231
Target Start/End: Complemental strand, 23158115 - 23158062
Alignment:
Q  178 acttactttgactatactttttaactaacatataaatataaatgttagcatgta 231  Q
    |||||||||||| | | ||||||||||| ||||||||| |||||||| ||||||    
T  23158115 acttactttgaccacattttttaactaatatataaatacaaatgttaacatgta 23158062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 225
Target Start/End: Complemental strand, 3321766 - 3321706
Alignment:
Q  166 attatttacatgacttactttgactata-ctttttaactaacatataaatataaatgttag 225  Q
    |||||| |||||| |||| ||||| ||| |||||||||||| ||| |||||||||||||||    
T  3321766 attattcacatgatttacattgaccatatctttttaactaatatacaaatataaatgttag 3321706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 231
Target Start/End: Complemental strand, 26567333 - 26567297
Alignment:
Q  195 tttttaactaacatataaatataaatgttagcatgta 231  Q
    ||||||||||| ||||||||||||||| |||||||||    
T  26567333 tttttaactaatatataaatataaatggtagcatgta 26567297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 71; Significance: 3e-32; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 124 - 230
Target Start/End: Complemental strand, 38916510 - 38916404
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 223  Q
    |||| ||||||||||||||||||| ||||||||||| | |||| |||| ||||||||| ||||||| ||||||||||||||||||||||||| |||||||    
T  38916510 ctccctccgtttcaaaatacatgtcgcatttttgcagtatgcactattcacatgacttgctttgaccatactttttaactaacatataaatacaaatgtt 38916411  T
Q  224 agcatgt 230  Q
    |||||||    
T  38916410 agcatgt 38916404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 124 - 231
Target Start/End: Original strand, 978079 - 978186
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 223  Q
    |||| |||||||||||||||||||   |||||||||||||||| |||| || |||||||||||||| ||||||||||||||| ||||||||| |||| ||    
T  978079 ctccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatatt 978178  T
Q  224 agcatgta 231  Q
    ||||||||    
T  978179 agcatgta 978186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 124 - 231
Target Start/End: Complemental strand, 8086290 - 8086183
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 223  Q
    |||| |||||||||||||||||||   |||||||||||||||| |||| || |||||||||||||||||||||||||||||| ||||||||| |||| ||    
T  8086290 ctccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgactatactttttaactaatatataaatacaaatatt 8086191  T
Q  224 agcatgta 231  Q
    | ||||||    
T  8086190 aacatgta 8086183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 129 - 231
Target Start/End: Complemental strand, 14634412 - 14634310
Alignment:
Q  129 tccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcat 228  Q
    |||||||||||||||||||   |||||||||||||||| || | || |||||||||||||||||||||||||||||| ||||||||| |||| |||||||    
T  14634412 tccgtttcaaaatacatgtccaatttttgcaatgtgcactagtcacttgacttactttgactatactttttaactaatatataaatacaaatattagcat 14634313  T
Q  229 gta 231  Q
    |||    
T  14634312 gta 14634310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 124 - 231
Target Start/End: Complemental strand, 9502887 - 9502780
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 223  Q
    |||| ||||||| ||||||||||||  |||||||||||||||| |||| |  |||||||||||||| ||||||||||||||| ||||||||| |||| ||    
T  9502887 ctccctccgttttaaaatacatgtttaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatatataaatacaaatatt 9502788  T
Q  224 agcatgta 231  Q
    ||||||||    
T  9502787 agcatgta 9502780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 124 - 231
Target Start/End: Complemental strand, 18094341 - 18094234
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 223  Q
    |||| ||||||||||||||||||||  ||||||||||||||||||||| || | ||||||||| | ||||||||||||||||  |||||||| |||| ||    
T  18094341 ctccctccgtttcaaaatacatgttcaatttttgcaatgtgcattattcacttaacttactttaattatactttttaactaatgtataaatacaaatatt 18094242  T
Q  224 agcatgta 231  Q
    ||||||||    
T  18094241 agcatgta 18094234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 124 - 231
Target Start/End: Original strand, 33387222 - 33387329
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 223  Q
    |||| ||| ||| |||||||||||   |||||||||||||||| |||| || |||||||||||||||||||||||||||||| ||||||||| |||| ||    
T  33387222 ctccctccattttaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgactatactttttaactaatatataaatacaaatatt 33387321  T
Q  224 agcatgta 231  Q
    ||||||||    
T  33387322 agcatgta 33387329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 131 - 231
Target Start/End: Complemental strand, 3472530 - 3472430
Alignment:
Q  131 cgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatgt 230  Q
    ||||||||||||||||||  |||||||||||||||| ||||||| |||||||||||||| ||| |||||||||||   ||||||| |||| |||||||||    
T  3472530 cgtttcaaaatacatgttcaatttttgcaatgtgcactatttacttgacttactttgaccatattttttaactaatgaataaatacaaatattagcatgt 3472431  T
Q  231 a 231  Q
    |    
T  3472430 a 3472430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 124 - 231
Target Start/End: Complemental strand, 12007892 - 12007785
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 223  Q
    |||| ||||||||||||||||||| ||||||||  | |||||| ||||||||||||||| ||||||  |||||||||| ||| ||||||||| ||||| |    
T  12007892 ctccctccgtttcaaaatacatgtcgcatttttatattgtgcactatttacatgacttaatttgaccctactttttaattaatatataaatacaaatgct 12007793  T
Q  224 agcatgta 231  Q
    ||||||||    
T  12007792 agcatgta 12007785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 124 - 198
Target Start/End: Original strand, 18598546 - 18598620
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttt 198  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||| |||||| |||||||||| ||||||||    
T  18598546 ctccatctgtttcaaaatacatgtcgcatttttgcaatgtgcattattgacatgaattactttgaccatactttt 18598620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 132 - 237
Target Start/End: Complemental strand, 27579681 - 27579577
Alignment:
Q  132 gtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatgta 231  Q
    ||||||||||||||||  ||||||||  ||||| |||||| | |||||||||||| |||||| ||||||||||| ||||||||| |||||||||||||||    
T  27579681 gtttcaaaatacatgtcacatttttgtgatgtgtattattca-atgacttactttaactatattttttaactaatatataaatacaaatgttagcatgta 27579583  T
Q  232 cgatat 237  Q
     |||||    
T  27579582 agatat 27579577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 124 - 231
Target Start/End: Complemental strand, 33587729 - 33587622
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 223  Q
    ||||||| ||||||||||||||||   ||||||||||||||||||||| |  |||||||||||||| ||| |||||||||||  |||||||| |||| ||    
T  33587729 ctccatctgtttcaaaatacatgtccaatttttgcaatgtgcattattcatttgacttactttgaccatattttttaactaatctataaatacaaatatt 33587630  T
Q  224 agcatgta 231  Q
    | ||||||    
T  33587629 aacatgta 33587622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 133 - 231
Target Start/End: Original strand, 39776641 - 39776739
Alignment:
Q  133 tttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatgta 231  Q
    ||||||||||||| | | ||||||||||||| || |||| |||| ||||| ||||||  |||||||||||||||||||||||| |||| ||||||||||    
T  39776641 tttcaaaatacatttcgtatttttgcaatgtacactattcacataacttattttgaccgtactttttaactaacatataaatacaaatattagcatgta 39776739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 153 - 235
Target Start/End: Original strand, 11251145 - 11251227
Alignment:
Q  153 ttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatgtacgat 235  Q
    |||||||||||||| |||| || ||||||| |||||| |||||||||||||||  |||||||| |||| ||||||||||||||    
T  11251145 ttttgcaatgtgcactattcacttgacttattttgaccatactttttaactaatgtataaatacaaatattagcatgtacgat 11251227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 129 - 231
Target Start/End: Original strand, 34111969 - 34112071
Alignment:
Q  129 tccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcat 228  Q
    |||||||||||||||||||    ||||||||||||||| |||| || |||||||||||||||||| ||||| |||||  |||||||| |||| ||| |||    
T  34111969 tccgtttcaaaatacatgtctagtttttgcaatgtgcactattcacttgacttactttgactatatttttttactaatctataaatacaaatattatcat 34112068  T
Q  229 gta 231  Q
    |||    
T  34112069 gta 34112071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 131 - 231
Target Start/End: Complemental strand, 30355127 - 30355027
Alignment:
Q  131 cgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatgt 230  Q
    |||||||||||||||||   ||||||||||| |||| |||| || ||| ||||||| || |||| |||||||||| ||||||||| |||| |||||||||    
T  30355127 cgtttcaaaatacatgtccaatttttgcaatatgcactattcacttgatttactttaaccatacattttaactaatatataaatacaaatattagcatgt 30355028  T
Q  231 a 231  Q
    |    
T  30355027 a 30355027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 132 - 231
Target Start/End: Original strand, 7224175 - 7224274
Alignment:
Q  132 gtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatgta 231  Q
    |||| ||||||||||||   ||||||||||||| | ||||||  |||||||||||||| ||||||| |||||||  |||||||| |||| ||||||||||    
T  7224175 gttttaaaatacatgttcattttttgcaatgtgtactatttaattgacttactttgaccatactttctaactaatttataaatacaaatattagcatgta 7224274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 133 - 215
Target Start/End: Complemental strand, 11785977 - 11785895
Alignment:
Q  133 tttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaata 215  Q
    ||||||||||||||||  |||||||||||||| | |||| || |||||||||||||  |||||||||||||||  ||||||||    
T  11785977 tttcaaaatacatgtttaatttttgcaatgtgtactattcacttgacttactttgatcatactttttaactaatgtataaata 11785895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 129 - 231
Target Start/End: Original strand, 32017220 - 32017322
Alignment:
Q  129 tccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcat 228  Q
    ||||||| ||||||||||  ||| ||||   ||||||| |||| |||| |||||||||||  ||| ||||||||||| ||||||||| ||||||||||||    
T  32017220 tccgttttaaaatacatgacgcaattttatgatgtgcaatattcacataacttactttgatcatattttttaactaatatataaatacaaatgttagcat 32017319  T
Q  229 gta 231  Q
    |||    
T  32017320 gta 32017322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 138 - 231
Target Start/End: Complemental strand, 12456886 - 12456793
Alignment:
Q  138 aaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatgta 231  Q
    |||||||| ||||| |||| ||||||||| ||||||||| ||||||||| |  ||| ||||||||||| ||| ||||| ||||||||| |||||    
T  12456886 aaatacatattgcaattttacaatgtgcactatttacataacttactttaatcatattttttaactaatatacaaatacaaatgttagtatgta 12456793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 124 - 228
Target Start/End: Complemental strand, 24992398 - 24992294
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 223  Q
    |||| |||||||||||||||||||   | |||| ||||||||| |||| ||||  ||||||||||| ||| |||||||||||  |||||||| |||| ||    
T  24992398 ctccctccgtttcaaaatacatgtcatagttttacaatgtgcactattcacatagcttactttgaccatattttttaactaatttataaatacaaatatt 24992299  T
Q  224 agcat 228  Q
    |||||    
T  24992298 agcat 24992294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 124 - 231
Target Start/End: Original strand, 40156200 - 40156307
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 223  Q
    |||| ||||||||||||||||| |   | |||||||||||||| |||| || ||||||||||| || ||| ||||||| |||  |||||||| |||| ||    
T  40156200 ctccctccgtttcaaaatacatatccaacttttgcaatgtgcactattcacttgacttacttttaccataatttttaattaatgtataaatacaaatatt 40156299  T
Q  224 agcatgta 231  Q
    ||||||||    
T  40156300 agcatgta 40156307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 153 - 231
Target Start/End: Original strand, 6996012 - 6996089
Alignment:
Q  153 ttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatgta 231  Q
    ||||| |||||||| |||| |||| ||||| ||| |||||| ||||||||||| |||||||||||||||||| ||||||    
T  6996012 ttttgtaatgtgcactattcacataactta-tttaactatattttttaactaatatataaatataaatgttaccatgta 6996089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 179 - 228
Target Start/End: Complemental strand, 26387084 - 26387035
Alignment:
Q  179 cttactttgactatactttttaactaacatataaatataaatgttagcat 228  Q
    ||||||||||  ||| ||||||||||||||||||||||||||||||||||    
T  26387084 cttactttgatcatattttttaactaacatataaatataaatgttagcat 26387035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 124 - 188
Target Start/End: Original strand, 10696792 - 10696856
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttga 188  Q
    ||||||||||||||||||||| || ||  |||||||||||||| |||| | ||||||||||||||    
T  10696792 ctccatccgtttcaaaatacacgtcgctattttgcaatgtgcactattcatatgacttactttga 10696856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 125 - 220
Target Start/End: Complemental strand, 5947810 - 5947715
Alignment:
Q  125 tccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaat 220  Q
    ||||||| ||| |||||||||||  ||||||  | || | ||||||| |||| |||||||||||| ||| |||||| |||||||||||||| ||||    
T  5947810 tccatccattttaaaatacatgtcacattttcacgatatacattattcacataacttactttgacaatattttttagctaacatataaatacaaat 5947715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 124 - 228
Target Start/End: Complemental strand, 24916508 - 24916402
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgac--tatactttttaactaacatataaatataaatg 221  Q
    ||||||||||||||||||||||||  || |||| ||||||| | |||| ||||  |||||||||||  |||  |||||||||||  |||||||| ||||     
T  24916508 ctccatccgtttcaaaatacatgtcacaattttacaatgtgtactattcacatagcttactttgaccatattttttttaactaatttataaatacaaata 24916409  T
Q  222 ttagcat 228  Q
    |||||||    
T  24916408 ttagcat 24916402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 231
Target Start/End: Complemental strand, 3422429 - 3422363
Alignment:
Q  168 tatttacatgacttactttgactatacttttt---aactaacatataaatataaatgttagcatgta 231  Q
    |||| |||| |||||||||||||||| |||||   |||||| ||||||||| |||||||||||||||    
T  3422429 tattcacataacttactttgactatatttttttttaactaatatataaatacaaatgttagcatgta 3422363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 231
Target Start/End: Complemental strand, 20692641 - 20692544
Alignment:
Q  132 gtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatgta 231  Q
    |||| |||||||| ||  |||||||||||||||||||||  || |||| || |||||| |||||||||||| |  ||||||||| |||| ||| ||||||    
T  20692641 gttttaaaatacacgtcacatttttgcaatgtgcattatccacttgacgtattttgaccatactttttaacca--atataaatacaaatattaacatgta 20692544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 186
Target Start/End: Complemental strand, 9050825 - 9050763
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttacttt 186  Q
    |||| ||||||||||||||||||||  |||||||||| ||||| |||| || | |||||||||    
T  9050825 ctccctccgtttcaaaatacatgttcaatttttgcaacgtgcactattcacttaacttacttt 9050763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 231
Target Start/End: Original strand, 18998706 - 18998796
Alignment:
Q  141 tacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatgta 231  Q
    ||||||| ||| |||| |||  ||||||||| ||||   ||||||| || ||| ||||||||||| ||||||||| ||||||||| |||||    
T  18998706 tacatgtcgcaattttacaacatgcattattcacatagtttactttaaccatattttttaactaatatataaatacaaatgttagtatgta 18998796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 224
Target Start/End: Complemental strand, 31197896 - 31197850
Alignment:
Q  178 acttactttgactatactttttaactaacatataaatataaatgtta 224  Q
    |||||||||||| ||| ||||||||||| ||||||||| ||||||||    
T  31197896 acttactttgacaataatttttaactaaaatataaatacaaatgtta 31197850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 64; Significance: 4e-28; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 124 - 231
Target Start/End: Original strand, 616785 - 616892
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 223  Q
    |||| |||||||||||||||||||   |||||||||||||||| |||| || |||||||||||||| ||||||||||||||| ||||||||| |||| ||    
T  616785 ctccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatatt 616884  T
Q  224 agcatgta 231  Q
    ||||||||    
T  616885 agcatgta 616892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 124 - 231
Target Start/End: Original strand, 623178 - 623285
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 223  Q
    |||| |||||||||||||||||||   |||||||||||||||| |||| || |||||||||||||| ||||||||||||||| ||||||||| |||| ||    
T  623178 ctccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatatt 623277  T
Q  224 agcatgta 231  Q
    ||||||||    
T  623278 agcatgta 623285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 129 - 231
Target Start/End: Complemental strand, 2766303 - 2766201
Alignment:
Q  129 tccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcat 228  Q
    ||||||||||||||||| |   |||||||||||||||| ||||||| |||||||||||||| |||||||||||||||  ||||||||||||| |||||||    
T  2766303 tccgtttcaaaatacatatccaatttttgcaatgtgcactatttacttgacttactttgaccatactttttaactaatgtataaatataaatattagcat 2766204  T
Q  229 gta 231  Q
    |||    
T  2766203 gta 2766201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 124 - 231
Target Start/End: Original strand, 18044427 - 18044534
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 223  Q
    ||||||||||||||||||||||||   |||||||||||||||| |||| || |||||||||||||| ||| |||||||||||  |||||||| |||| ||    
T  18044427 ctccatccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatattttttaactaatgtataaatacaaatatt 18044526  T
Q  224 agcatgta 231  Q
    ||||||||    
T  18044527 agcatgta 18044534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 124 - 231
Target Start/End: Complemental strand, 42587508 - 42587401
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 223  Q
    |||| |||||||||||||||||||   |||||||||||||||| |||| || |||||||||||||| |||||||||||||||  |||||||| |||| ||    
T  42587508 ctccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatgtataaatacaaatatt 42587409  T
Q  224 agcatgta 231  Q
    ||||||||    
T  42587408 agcatgta 42587401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 129 - 231
Target Start/End: Complemental strand, 3100750 - 3100648
Alignment:
Q  129 tccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcat 228  Q
    |||||||||||||||||||   |||||||||||||||| ||||||| ||| |||||||||| |||||||||||||||  |||||||| |||| |||||||    
T  3100750 tccgtttcaaaatacatgtccaatttttgcaatgtgcactatttacttgatttactttgaccatactttttaactaatgtataaatacaaatattagcat 3100651  T
Q  229 gta 231  Q
    |||    
T  3100650 gta 3100648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 118 - 231
Target Start/End: Complemental strand, 36642125 - 36642011
Alignment:
Q  118 aagctgctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgacta-tactttttaactaacatataaatat 216  Q
    ||||| |||| ||||||||||||||||||||  |||||||||||||||| |||| || |||||||||||||| | |||||||||||| | |||||||||     
T  36642125 aagctactccctccgtttcaaaatacatgttcaatttttgcaatgtgcactattcacttgacttactttgaccattactttttaacttatatataaatac 36642026  T
Q  217 aaatgttagcatgta 231  Q
    |||| ||||||||||    
T  36642025 aaatattagcatgta 36642011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 129 - 231
Target Start/End: Original strand, 40494391 - 40494493
Alignment:
Q  129 tccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcat 228  Q
    |||||||||||||||||||   |||||| ||||||||| |||| || |||||||||||||| ||||||||||||||| ||||||||| |||| |||||||    
T  40494391 tccgtttcaaaatacatgtccaatttttccaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatattagcat 40494490  T
Q  229 gta 231  Q
    |||    
T  40494491 gta 40494493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 133 - 229
Target Start/End: Complemental strand, 13216972 - 13216876
Alignment:
Q  133 tttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatg 229  Q
    |||||||||||||||   |||||||||||||||| |||| || |||||||||||||| |||||||||||||||  ||||||||||||| ||||||||    
T  13216972 tttcaaaatacatgtctaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatgtataaatataaatattagcatg 13216876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 124 - 220
Target Start/End: Original strand, 24524102 - 24524198
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaat 220  Q
    |||| ||||||||||||||||||||  | |||||||||||||| ||||||| |||||||||||||| |||||||||||||||  |||||||| ||||    
T  24524102 ctccttccgtttcaaaatacatgttcaaattttgcaatgtgcactatttacttgacttactttgaccatactttttaactaatgtataaatacaaat 24524198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 124 - 214
Target Start/End: Complemental strand, 6414225 - 6414135
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaat 214  Q
    |||||||||||| |||||| ||||  ||||||||||||||||| |||| ||||||||||||||||| ||||||||||| ||| ||||||||    
T  6414225 ctccatccgttttaaaataaatgtcacatttttgcaatgtgcactattcacatgacttactttgaccatactttttaaataatatataaat 6414135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 129 - 231
Target Start/End: Original strand, 14237287 - 14237389
Alignment:
Q  129 tccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcat 228  Q
    |||||||||||||||||||   |||||||||||||||| |||| || |||||||||||||| ||| |||||||||||  |||||||| |||| |||||||    
T  14237287 tccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatattttttaactaatgtataaatacaaatattagcat 14237386  T
Q  229 gta 231  Q
    |||    
T  14237387 gta 14237389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 129 - 231
Target Start/End: Original strand, 32998457 - 32998559
Alignment:
Q  129 tccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcat 228  Q
    |||||||||||||||||||   |||||||||||||||| |||| || |||||||||||||| ||| |||||||||||  |||||||| |||| |||||||    
T  32998457 tccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatattttttaactaatgtataaatacaaatattagcat 32998556  T
Q  229 gta 231  Q
    |||    
T  32998557 gta 32998559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 124 - 237
Target Start/End: Original strand, 5878319 - 5878431
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 223  Q
    |||| |||||||| ||||||||||  ||||||||||||||||| |||| || |||||||||||||| ||| |||||||||||  |||||||| |||| ||    
T  5878319 ctccctccgtttccaaatacatgtc-catttttgcaatgtgcactattcacttgacttactttgaccatattttttaactaatgtataaatacaaatatt 5878417  T
Q  224 agcatgtacgatat 237  Q
    |||||||| |||||    
T  5878418 agcatgtaagatat 5878431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 127 - 231
Target Start/End: Original strand, 38957175 - 38957279
Alignment:
Q  127 catccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagc 226  Q
    |||||||||||||||| ||||   |||||||||||||||| |||| || ||| |||||||||| ||| |||||||||||| |||||||| |||| |||||    
T  38957175 catccgtttcaaaatatatgtccaatttttgcaatgtgcactattaacttgatttactttgaccatattttttaactaacgtataaatacaaatattagc 38957274  T
Q  227 atgta 231  Q
    |||||    
T  38957275 atgta 38957279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 125 - 225
Target Start/End: Complemental strand, 22489533 - 22489433
Alignment:
Q  125 tccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtta 224  Q
    ||||||||||| ||||| |||||   |||||||||||||||| |||| || |||||||||||||| |||||||||||||||  |||||||| |||| |||    
T  22489533 tccatccgttttaaaatgcatgtctaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatgtataaatacaaatatta 22489434  T
Q  225 g 225  Q
    |    
T  22489433 g 22489433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 127 - 215
Target Start/End: Original strand, 35403521 - 35403609
Alignment:
Q  127 catccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaata 215  Q
    |||||||||||||||||||||   |||||||||||||||| |||| || |||| ||||||||| |||||||||||||||  ||||||||    
T  35403521 catccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacatactttgaccatactttttaactaatgtataaata 35403609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 124 - 228
Target Start/End: Original strand, 36167078 - 36167182
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 223  Q
    |||| ||||||| |||||||||||  ||||||||||||||| | |||| || ||||||||||||| |||||||||| |||||  |||||||| |||| ||    
T  36167078 ctccctccgttttaaaatacatgtatcatttttgcaatgtgtactattcacttgacttactttgattatactttttcactaatgtataaatacaaatatt 36167177  T
Q  224 agcat 228  Q
    |||||    
T  36167178 agcat 36167182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 133 - 231
Target Start/End: Original strand, 41263821 - 41263919
Alignment:
Q  133 tttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatgta 231  Q
    ||||||||||||| |   |||||||||||||||| |||| || |||||||||||||| ||| |||||||||||  |||||||| |||| ||||||||||    
T  41263821 tttcaaaatacatatccaatttttgcaatgtgcactattcacttgacttactttgaccatattttttaactaatgtataaatacaaatattagcatgta 41263919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 137 - 238
Target Start/End: Complemental strand, 3370503 - 3370402
Alignment:
Q  137 aaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatgtacgata 236  Q
    ||||||||| |||| ||||||||||||| | | || ||||||||||||||||| ||| ||||||| ||| ||||||||| ||||||||  ||||| ||||    
T  3370503 aaaatacattttgcttttttgcaatgtggactgttcacatgacttactttgaccatattttttaattaatatataaatacaaatgttaatatgtaagata 3370404  T
Q  237 tt 238  Q
    ||    
T  3370403 tt 3370402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 131 - 228
Target Start/End: Original strand, 18090338 - 18090434
Alignment:
Q  131 cgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcat 228  Q
    ||||| ||| ||||||| | |||||| ||||||||| |||||| |||||||| |||||  ||| ||||||||||| ||||||||||||||||||||||    
T  18090338 cgttttaaattacatgtcgaattttttcaatgtgcactatttatatgactta-tttgatcatattttttaactaatatataaatataaatgttagcat 18090434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 124 - 231
Target Start/End: Original strand, 132019 - 132126
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 223  Q
    |||| |||||||||||||||||||    ||||||||| ||||| |||| || |||||||||||||  ||| |||||||||||  |||||||| |||| ||    
T  132019 ctccctccgtttcaaaatacatgtccactttttgcaacgtgcactattcacttgacttactttgatcatattttttaactaatgtataaatacaaatatt 132118  T
Q  224 agcatgta 231  Q
    ||||||||    
T  132119 agcatgta 132126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 129 - 231
Target Start/End: Complemental strand, 4270347 - 4270245
Alignment:
Q  129 tccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcat 228  Q
    ||||||| |||||||||||   ||||||| |||||||| |||| || |||||||||||||| ||| |||||||||||  |||||||| |||| ||| |||    
T  4270347 tccgttttaaaatacatgtccaatttttgtaatgtgcactattcacttgacttactttgaccatattttttaactaatgtataaatacaaatattaacat 4270248  T
Q  229 gta 231  Q
    |||    
T  4270247 gta 4270245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 124 - 205
Target Start/End: Original strand, 8394348 - 8394429
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaa 205  Q
    |||| |||||||||||||||||||   |||||||||||||||| |||| || |||||||||||||| | | |||||||||||    
T  8394348 ctccctccgtttcaaaatacatgtctaatttttgcaatgtgcactattcacttgacttactttgaccaaattttttaactaa 8394429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 124 - 225
Target Start/End: Complemental strand, 33700334 - 33700232
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatt-tttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgt 222  Q
    |||| ||||||||||||||||||| |||   ||| ||||| ||| |||| ||||  ||||||||||| ||| ||||||||||| ||||||||| ||||||    
T  33700334 ctccctccgtttcaaaatacatgtcgcaaaatttacaatgcgcactattcacatagcttactttgaccatattttttaactaatatataaatacaaatgt 33700235  T
Q  223 tag 225  Q
    |||    
T  33700234 tag 33700232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 133 - 231
Target Start/End: Original strand, 18035111 - 18035209
Alignment:
Q  133 tttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatgta 231  Q
    |||||||||| |||| ||| |||| |||||| |||||||  || | | ||| ||||| ||| ||||||||||| ||||||||  |||||||||||||||    
T  18035111 tttcaaaatatatgtcgcaattttacaatgtacattattcgcacggcgtacattgaccataatttttaactaatatataaatgcaaatgttagcatgta 18035209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 130 - 231
Target Start/End: Original strand, 5173259 - 5173360
Alignment:
Q  130 ccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatg 229  Q
    |||||| |||||| | |||||| |||||||||||| | |||| | |||| |||||||||  ||| | ||||||||| ||||||||| |||| ||| ||||    
T  5173259 ccgttttaaaatatacgttgcaattttgcaatgtgtactattcatatgatttactttgatcatattatttaactaatatataaatacaaatattaacatg 5173358  T
Q  230 ta 231  Q
    ||    
T  5173359 ta 5173360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 231
Target Start/End: Complemental strand, 32780144 - 32780081
Alignment:
Q  168 tatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatgta 231  Q
    |||| ||||||||||| || ||||||  |||||||||  ||||||||||||||||||| |||||    
T  32780144 tattcacatgacttaccttaactatatattttaactagtatataaatataaatgttagtatgta 32780081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 186
Target Start/End: Complemental strand, 13217281 - 13217219
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttacttt 186  Q
    |||| |||||||||||||||||||   ||||||||||||| || |||| || |||||||||||    
T  13217281 ctccttccgtttcaaaatacatgtccaatttttgcaatgtacactattcacttgacttacttt 13217219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 231
Target Start/End: Original strand, 11637811 - 11637891
Alignment:
Q  151 atttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatgta 231  Q
    |||||| ||||||||| |||| || ||||||| ||||||  |||||||||||||   |||||||| || | ||||||||||    
T  11637811 atttttacaatgtgcactattcacttgacttattttgaccgtactttttaactagtgtataaatacaagtattagcatgta 11637891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 186
Target Start/End: Original strand, 38497083 - 38497147
Alignment:
Q  122 tgctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttacttt 186  Q
    |||||| ||||||| |||||| |||||  |||||| ||||||||| |||| || |||||||||||    
T  38497083 tgctccctccgttttaaaatatatgttcaatttttacaatgtgcactattcacttgacttacttt 38497147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295 (Bit Score: 52; Significance: 6e-21; HSPs: 2)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 124 - 231
Target Start/End: Complemental strand, 13977 - 13870
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 223  Q
    |||| ||||||| |||||||||||   || |||| |||||||| |||| || |||||||||||||| |||||||||||||||  ||||||||||||| ||    
T  13977 ctccctccgttttaaaatacatgtctaatatttgtaatgtgcactattcacttgacttactttgaccatactttttaactaatgtataaatataaatatt 13878  T
Q  224 agcatgta 231  Q
    ||||||||    
T  13877 agcatgta 13870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 124 - 183
Target Start/End: Original strand, 9374 - 9433
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttac 183  Q
    |||| |||||||||||||||||||   |||||||||||||||| |||| || ||||||||    
T  9374 ctccctccgtttcaaaatacatgtctaatttttgcaatgtgcactattcacttgacttac 9433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 124 - 231
Target Start/End: Complemental strand, 100907 - 100800
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 223  Q
    |||| ||||||||||||||||||||  | |||||||||||||| |||| || |||||||||||||| ||| |||||||||||  |||||||| |||| ||    
T  100907 ctccctccgtttcaaaatacatgttcaacttttgcaatgtgcactattcacttgacttactttgaccataatttttaactaatgtataaatacaaatatt 100808  T
Q  224 agcatgta 231  Q
    ||| ||||    
T  100807 agcgtgta 100800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 124 - 231
Target Start/End: Complemental strand, 162097 - 161990
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 223  Q
    |||| |||||||||||||||||||   ||||||| |||||||| |||| || |||||||| ||||| |||||||||||||||  |||||||| |||| ||    
T  162097 ctccctccgtttcaaaatacatgtctaatttttgtaatgtgcactattcacttgacttacattgaccatactttttaactaatgtataaatacaaatatt 161998  T
Q  224 agcatgta 231  Q
    ||||||||    
T  161997 agcatgta 161990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0225 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0225
Description:

Target: scaffold0225; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 127 - 231
Target Start/End: Complemental strand, 9090 - 8986
Alignment:
Q  127 catccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagc 226  Q
    ||||||||||| ||||||| |  || |||| |||| ||||||||| |||| |||||||||||| | | ||||||||||| ||||||||| ||||||||||    
T  9090 catccgtttcataatacatttcacaattttacaatatgcattattcacataacttactttgaccacattttttaactaatatataaatacaaatgttagc 8991  T
Q  227 atgta 231  Q
    |||||    
T  8990 atgta 8986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 127 - 231
Target Start/End: Complemental strand, 138287 - 138183
Alignment:
Q  127 catccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagc 226  Q
    ||||| ||||| ||||||| |  || |||| |||| ||||||||| |||| |||||||||||| | | ||||||||||| ||||||||| ||||||||||    
T  138287 catccctttcataatacatttcacaattttacaatatgcattattcacataacttactttgaccacattttttaactaatatataaatacaaatgttagc 138188  T
Q  227 atgta 231  Q
    |||||    
T  138187 atgta 138183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 131 - 231
Target Start/End: Complemental strand, 68022 - 67922
Alignment:
Q  131 cgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatgt 230  Q
    |||||||||||||||||   ||||||| |||||||| |||| |  |||||||||||||| |||||||||||||||  |||||||| |||| ||| |||||    
T  68022 cgtttcaaaatacatgtccaatttttgaaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattaacatgt 67923  T
Q  231 a 231  Q
    |    
T  67922 a 67922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 127 - 231
Target Start/End: Original strand, 22785 - 22889
Alignment:
Q  127 catccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagc 226  Q
    ||||||||||| ||||||| |  || |||| |||| ||||||||| |||| ||||| |||||| | | ||||||||| | ||||||||| ||||||||||    
T  22785 catccgtttcataatacatttcacaattttacaatatgcattattcacataacttattttgaccacattttttaactcatatataaatacaaatgttagc 22884  T
Q  227 atgta 231  Q
    |||||    
T  22885 atgta 22889  T

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Target: scaffold0595 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0595
Description:

Target: scaffold0595; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 231
Target Start/End: Original strand, 3964 - 4057
Alignment:
Q  138 aaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgttagcatgta 231  Q
    ||||||| |||| | |||| | ||| ||| |||| ||||  ||||||||||| ||| ||||||||||| ||||||||| |||||||||||||||    
T  3964 aaatacaagttgtaattttacgatgcgcactattcacatagcttactttgaccatattttttaactaatatataaatacaaatgttagcatgta 4057  T

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Target: scaffold0056 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 124 - 228
Target Start/End: Original strand, 70963 - 71066
Alignment:
Q  124 ctccatccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactatactttttaactaacatataaatataaatgtt 223  Q
    |||| ||| |||||||||||||||   ||||||||||| |||| |||| || ||||||| |||||| ||| |||||||||||  |||||||| |||| ||    
T  70963 ctccctccatttcaaaatacatgtccaatttttgcaatatgcactattcacttgacttattttgaccata-tttttaactaatgtataaatacaaatatt 71061  T
Q  224 agcat 228  Q
    |||||    
T  71062 agcat 71066  T

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Target: scaffold0009 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 228
Target Start/End: Complemental strand, 217131 - 217031
Alignment:
Q  129 tccgtttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttactttgactata-ctttttaactaacatataaatataaatgttagca 227  Q
    |||||||||||||||| || ||| |||| ||||||||| ||||  ||| |||||  ||||| |||  ||||||| ||| ||||||||| |||||||||||    
T  217131 tccgtttcaaaatacaagtcgcaattttacaatgtgcaatattctcataacttatgttgaccatatttttttaagtaatatataaatacaaatgttagca 217032  T
Q  228 t 228  Q
    |    
T  217031 t 217031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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