View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3386_high_24 (Length: 250)
Name: NF3386_high_24
Description: NF3386
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3386_high_24 |
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Alignment Details
Target: chr6 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 2 - 244
Target Start/End: Original strand, 1892579 - 1892821
Alignment:
| Q |
2 |
agctgaacctgttcaatttgtgaactgtcagtcacagttcagtttggttcaatttgatggtttgattttcaatttattttcaacctaaatgtaaccacac |
101 |
Q |
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| T |
1892579 |
agctgaacctgttcaatttgtgaactgtcagtcacagttcagtttggttcaatttgatggtttggttttcaatttattttcaacctaaatgtaaccacac |
1892678 |
T |
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| Q |
102 |
gtgtctacgtcggtgctacataatatttgccagaatgtgaaaattgacttcctcaattctctcatcatttatatttcataaatgagagcttnnnnnnnta |
201 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| | |
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| T |
1892679 |
gtgtctacgtcggtgctacataatatttgccagaatgtgaaaattgactacctcaattctctcatcatttatatttcataaatgagagcttaaaaaattt |
1892778 |
T |
|
| Q |
202 |
taattctaaaaagtttcagttcataatcctatattcatttcac |
244 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1892779 |
taattctaaaaagtttcagttcataatcctatattcatttcac |
1892821 |
T |
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