View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3386_low_23 (Length: 297)
Name: NF3386_low_23
Description: NF3386
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3386_low_23 |
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Alignment Details
Target: chr2 (Bit Score: 278; Significance: 1e-155; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 1 - 286
Target Start/End: Original strand, 1719111 - 1719396
Alignment:
| Q |
1 |
taggacttttgaagatcatgttagatgttttaaactttctctaaaatctttgatattattaggtaaggtgaaaatgcattcatttatagtgttatgtgtg |
100 |
Q |
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| T |
1719111 |
taggacttttgaagatcatgttagatgttttaaagtttctctaaaatctttgatattattaggtaaggtgaaaatgcattcatttatagtgttatgtgtg |
1719210 |
T |
|
| Q |
101 |
aaaggatagctacttacttgctcaattctacggtgaaaaatacgtttcaagatcccattgaggtgtttgcttcggtgaaccattccaatttcctcttgca |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
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| T |
1719211 |
aaaggatagctacttacttgctcaattctacggtgaaaaatacgtttcaagatcccattgaagtgtttgcttcggtgaaccattccaatttcctcttgca |
1719310 |
T |
|
| Q |
201 |
atttttctagcaaaccgacatatgtaattccagaatgttctcggattatttttgttaaaagataggtcataacaccgttcatctct |
286 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1719311 |
atttttctagcaaaccgacatatgtaattccagaatgttctcggattatttttgttaaaagataggtcataacaccgttcatctct |
1719396 |
T |
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