View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3386_low_25 (Length: 254)
Name: NF3386_low_25
Description: NF3386
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3386_low_25 |
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Alignment Details
Target: chr1 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 13 - 236
Target Start/End: Original strand, 27026383 - 27026606
Alignment:
| Q |
13 |
aaaataataatgaaacataaccaaagttgtgtagagaacatggacctaaatggacttgttacttggatacaaatattttaatatcattaaaaaagtttct |
112 |
Q |
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| T |
27026383 |
aaaataataatgaaacataaccaaagttgtgtagagaacatggacctaaatggacttgttacttggatacaaatattttaatatcattaaaaaagtttct |
27026482 |
T |
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| Q |
113 |
taaaaggaagtaaggaacagggatgtaaattttcaagatcagaacttcaatcaaaattcagtacacagaaaataacatttaacatatatctaatctctca |
212 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
27026483 |
taaaaggaagtaaggaacagggatgtaaattttcaagatcagaacttcaatcaaaattcagtacacagaaaataacatttaacatatatctaatctctca |
27026582 |
T |
|
| Q |
213 |
aattataatccaataaatatacat |
236 |
Q |
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|||||||||||||||||||||||| |
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| T |
27026583 |
aattataatccaataaatatacat |
27026606 |
T |
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