View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3386_low_3 (Length: 767)

Name: NF3386_low_3
Description: NF3386
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3386_low_3
NF3386_low_3
[»] chr4 (65 HSPs)
chr4 (1-404)||(46356441-46356847)
chr4 (511-688)||(1803461-1803633)
chr4 (511-690)||(24007903-24008082)
chr4 (520-689)||(12673037-12673206)
chr4 (511-689)||(40797792-40797970)
chr4 (511-689)||(46944544-46944722)
chr4 (511-689)||(80459-80637)
chr4 (520-689)||(51995040-51995209)
chr4 (508-689)||(55891982-55892163)
chr4 (511-655)||(13455697-13455841)
chr4 (520-685)||(9222141-9222304)
chr4 (511-689)||(25134536-25134702)
chr4 (511-672)||(51407949-51408110)
chr4 (511-680)||(48802475-48802645)
chr4 (517-661)||(34980510-34980654)
chr4 (511-689)||(28265673-28265848)
chr4 (511-641)||(49405635-49405765)
chr4 (511-687)||(50710784-50710946)
chr4 (511-683)||(15697083-15697255)
chr4 (509-683)||(11055224-11055398)
chr4 (508-680)||(36156291-36156463)
chr4 (569-685)||(44378216-44378332)
chr4 (511-683)||(48977544-48977716)
chr4 (414-509)||(46356322-46356417)
chr4 (505-683)||(53369840-53370018)
chr4 (511-683)||(9469745-9469917)
chr4 (512-680)||(19455159-19455327)
chr4 (511-683)||(21441549-21441721)
chr4 (517-689)||(25102603-25102775)
chr4 (509-683)||(19852946-19853120)
chr4 (511-681)||(22184473-22184643)
chr4 (511-680)||(48339099-48339268)
chr4 (511-683)||(36543749-36543921)
chr4 (511-683)||(45674803-45674975)
chr4 (508-680)||(50146915-50147087)
chr4 (550-683)||(43798262-43798395)
chr4 (511-683)||(50605976-50606148)
chr4 (511-683)||(52813569-52813741)
chr4 (517-652)||(52733707-52733841)
chr4 (511-681)||(56224115-56224285)
chr4 (510-649)||(12789551-12789690)
chr4 (571-649)||(7505531-7505609)
chr4 (511-649)||(9906356-9906494)
chr4 (509-683)||(22721296-22721469)
chr4 (511-641)||(48731173-48731303)
chr4 (520-689)||(39736645-39736814)
chr4 (511-683)||(26632904-26633076)
chr4 (524-683)||(44791256-44791415)
chr4 (510-679)||(24550049-24550218)
chr4 (573-683)||(49820950-49821060)
chr4 (571-685)||(52706183-52706297)
chr4 (511-649)||(6866109-6866241)
chr4 (515-609)||(9874212-9874306)
chr4 (514-683)||(27891355-27891523)
chr4 (511-600)||(36643985-36644073)
chr4 (555-680)||(43812101-43812226)
chr4 (606-683)||(53369656-53369733)
chr4 (511-612)||(4274556-4274657)
chr4 (511-592)||(9959391-9959471)
chr4 (516-600)||(28470870-28470953)
chr4 (517-637)||(50137407-50137527)
chr4 (609-681)||(41822079-41822153)
chr4 (609-683)||(16742423-16742497)
chr4 (511-649)||(48151126-48151264)
chr4 (511-540)||(49821070-49821099)
[»] chr1 (53 HSPs)
chr1 (511-693)||(38061178-38061360)
chr1 (511-689)||(47983217-47983395)
chr1 (511-689)||(28006312-28006490)
chr1 (511-687)||(29677519-29677695)
chr1 (511-674)||(7995948-7996111)
chr1 (520-689)||(40159639-40159808)
chr1 (521-689)||(5204479-5204647)
chr1 (511-689)||(15257171-15257349)
chr1 (506-689)||(50447303-50447486)
chr1 (511-649)||(24575911-24576049)
chr1 (511-685)||(7956290-7956464)
chr1 (508-614)||(6413276-6413382)
chr1 (511-681)||(45581008-45581178)
chr1 (511-678)||(48575080-48575247)
chr1 (511-680)||(35810689-35810858)
chr1 (511-683)||(39802767-39802939)
chr1 (511-683)||(47602862-47603034)
chr1 (501-687)||(27076505-27076691)
chr1 (516-641)||(31816578-31816703)
chr1 (511-683)||(24469817-24469989)
chr1 (511-683)||(32179826-32179998)
chr1 (511-680)||(25124885-25125054)
chr1 (511-683)||(7016075-7016247)
chr1 (509-609)||(7841665-7841764)
chr1 (511-683)||(36419069-36419241)
chr1 (553-683)||(42916156-42916286)
chr1 (553-683)||(46264986-46265116)
chr1 (520-681)||(20349116-20349277)
chr1 (511-683)||(15306461-15306633)
chr1 (520-683)||(7596361-7596524)
chr1 (511-624)||(15014342-15014455)
chr1 (512-681)||(45653433-45653601)
chr1 (511-683)||(36119040-36119211)
chr1 (511-612)||(12224575-12224676)
chr1 (511-680)||(42937045-42937214)
chr1 (511-651)||(7702835-7702975)
chr1 (509-685)||(21680654-21680830)
chr1 (511-683)||(31869562-31869734)
chr1 (511-629)||(14578585-14578703)
chr1 (510-680)||(23916781-23916951)
chr1 (510-683)||(37441185-37441358)
chr1 (511-644)||(44596524-44596657)
chr1 (562-670)||(14796569-14796677)
chr1 (562-670)||(14805443-14805551)
chr1 (571-685)||(19508494-19508608)
chr1 (514-683)||(15662917-15663086)
chr1 (572-683)||(23915658-23915769)
chr1 (574-685)||(43087529-43087640)
chr1 (520-681)||(20347638-20347797)
chr1 (578-685)||(13645247-13645354)
chr1 (585-680)||(40002865-40002960)
chr1 (588-685)||(8828303-8828400)
chr1 (512-580)||(9381756-9381824)
[»] chr5 (47 HSPs)
chr5 (511-693)||(26298269-26298451)
chr5 (511-693)||(27450581-27450763)
chr5 (510-693)||(39407364-39407547)
chr5 (511-693)||(34719657-34719839)
chr5 (511-693)||(34857305-34857487)
chr5 (521-693)||(26299805-26299977)
chr5 (510-691)||(19716143-19716319)
chr5 (521-693)||(34723670-34723835)
chr5 (511-690)||(34724754-34724921)
chr5 (511-689)||(27196039-27196217)
chr5 (510-688)||(39409103-39409267)
chr5 (508-687)||(10493949-10494128)
chr5 (511-641)||(32945021-32945151)
chr5 (511-683)||(3801364-3801536)
chr5 (511-683)||(10327898-10328070)
chr5 (525-683)||(3457794-3457956)
chr5 (511-683)||(38522861-38523033)
chr5 (553-683)||(1225319-1225449)
chr5 (584-689)||(28246693-28246799)
chr5 (511-683)||(15933128-15933303)
chr5 (511-622)||(5382825-5382936)
chr5 (511-680)||(20188944-20189113)
chr5 (511-689)||(36523713-36523895)
chr5 (511-588)||(28247473-28247550)
chr5 (511-683)||(27906066-27906238)
chr5 (511-683)||(31620836-31621008)
chr5 (510-685)||(41783291-41783466)
chr5 (515-683)||(18880160-18880328)
chr5 (514-689)||(24535969-24536144)
chr5 (571-685)||(26218013-26218127)
chr5 (609-687)||(28431030-28431108)
chr5 (510-683)||(31021831-31022004)
chr5 (514-649)||(39414183-39414319)
chr5 (510-649)||(1840686-1840825)
chr5 (565-680)||(2675987-2676102)
chr5 (562-685)||(14500757-14500880)
chr5 (511-683)||(29328008-29328183)
chr5 (511-649)||(1091126-1091263)
chr5 (553-683)||(20190626-20190756)
chr5 (555-685)||(30660951-30661081)
chr5 (571-678)||(11136067-11136173)
chr5 (572-683)||(19282175-19282286)
chr5 (596-685)||(30051420-30051509)
chr5 (596-632)||(24202721-24202757)
chr5 (515-655)||(17168447-17168589)
chr5 (629-664)||(34725175-34725210)
chr5 (616-683)||(43386695-43386762)
[»] chr3 (37 HSPs)
chr3 (508-689)||(12710664-12710845)
chr3 (510-689)||(40943523-40943702)
chr3 (511-689)||(30662131-30662309)
chr3 (511-689)||(20550202-20550380)
chr3 (512-683)||(26049541-26049712)
chr3 (579-689)||(54432259-54432369)
chr3 (510-683)||(46293212-46293385)
chr3 (530-684)||(48730856-48731010)
chr3 (511-683)||(39135322-39135494)
chr3 (509-680)||(54393441-54393612)
chr3 (511-683)||(9505121-9505293)
chr3 (507-683)||(32689137-32689313)
chr3 (511-680)||(33438731-33438900)
chr3 (509-687)||(15822347-15822525)
chr3 (515-683)||(26136301-26136469)
chr3 (511-683)||(39469531-39469703)
chr3 (511-649)||(52199431-52199569)
chr3 (629-693)||(49026577-49026641)
chr3 (511-683)||(52934780-52934952)
chr3 (520-683)||(41609856-41610018)
chr3 (520-683)||(39942809-39942972)
chr3 (513-683)||(23206310-23206479)
chr3 (511-683)||(25253670-25253842)
chr3 (511-683)||(44574494-44574666)
chr3 (574-685)||(5418644-5418755)
chr3 (519-646)||(18074581-18074708)
chr3 (520-683)||(28242551-28242714)
chr3 (511-684)||(19560774-19560947)
chr3 (571-683)||(50965371-50965484)
chr3 (571-683)||(51068506-51068619)
chr3 (510-612)||(45714735-45714837)
chr3 (526-649)||(31589624-31589747)
chr3 (511-569)||(54432177-54432235)
chr3 (605-649)||(29536599-29536643)
chr3 (604-680)||(53529683-53529759)
chr3 (565-632)||(25582618-25582685)
chr3 (604-683)||(52199357-52199436)
[»] chr7 (52 HSPs)
chr7 (512-689)||(18249994-18250171)
chr7 (511-689)||(33898944-33899122)
chr7 (511-689)||(46573612-46573790)
chr7 (511-689)||(17025361-17025539)
chr7 (511-689)||(18740218-18740396)
chr7 (508-689)||(26719782-26719963)
chr7 (511-685)||(36472410-36472584)
chr7 (511-689)||(35543556-35543731)
chr7 (511-689)||(21760583-21760761)
chr7 (508-687)||(49034221-49034400)
chr7 (511-689)||(32356928-32357106)
chr7 (514-689)||(33019269-33019443)
chr7 (511-683)||(7447849-7448021)
chr7 (562-689)||(30919389-30919516)
chr7 (525-683)||(29037794-29037952)
chr7 (515-655)||(31491816-31491956)
chr7 (511-683)||(37334251-37334423)
chr7 (512-683)||(36926972-36927143)
chr7 (511-683)||(5776130-5776302)
chr7 (511-683)||(42072056-42072228)
chr7 (511-646)||(33124705-33124840)
chr7 (508-683)||(43052845-43053020)
chr7 (510-683)||(44421900-44422074)
chr7 (511-680)||(3942152-3942321)
chr7 (511-684)||(28949758-28949931)
chr7 (511-683)||(5794936-5795108)
chr7 (511-683)||(20400969-20401141)
chr7 (511-671)||(33935493-33935653)
chr7 (519-683)||(45176218-45176382)
chr7 (511-681)||(22075038-22075208)
chr7 (511-680)||(37401566-37401735)
chr7 (511-683)||(665847-666019)
chr7 (510-685)||(11595795-11595970)
chr7 (509-683)||(222224-222398)
chr7 (571-685)||(45055699-45055813)
chr7 (573-683)||(48505850-48505960)
chr7 (511-683)||(27231539-27231711)
chr7 (570-649)||(23237576-23237655)
chr7 (571-685)||(40480110-40480225)
chr7 (572-643)||(48634460-48634531)
chr7 (522-683)||(10618894-10619055)
chr7 (515-683)||(3930720-3930888)
chr7 (511-683)||(33171534-33171706)
chr7 (508-649)||(17608719-17608857)
chr7 (573-683)||(26216245-26216355)
chr7 (605-683)||(2466611-2466689)
chr7 (577-683)||(10096444-10096550)
chr7 (511-641)||(23226999-23227129)
chr7 (511-641)||(23236152-23236282)
chr7 (512-600)||(41449796-41449884)
chr7 (585-683)||(15434216-15434314)
chr7 (511-540)||(48505795-48505824)
[»] chr6 (22 HSPs)
chr6 (511-687)||(3081718-3081894)
chr6 (510-689)||(13311984-13312165)
chr6 (506-687)||(7437268-7437449)
chr6 (511-683)||(1501816-1501988)
chr6 (517-687)||(18099780-18099950)
chr6 (511-680)||(5640252-5640421)
chr6 (510-641)||(17441168-17441299)
chr6 (517-649)||(18095521-18095653)
chr6 (511-680)||(10961796-10961965)
chr6 (511-683)||(4441301-4441473)
chr6 (511-683)||(6999235-6999407)
chr6 (510-683)||(8200610-8200772)
chr6 (509-683)||(10346689-10346863)
chr6 (571-685)||(33110424-33110538)
chr6 (568-680)||(9950817-9950929)
chr6 (511-683)||(11460014-11460178)
chr6 (565-680)||(27984944-27985059)
chr6 (588-683)||(30774006-30774101)
chr6 (608-687)||(2962799-2962878)
chr6 (578-685)||(22295882-22295989)
chr6 (574-641)||(32163551-32163618)
chr6 (626-683)||(17071224-17071281)
[»] chr2 (41 HSPs)
chr2 (510-687)||(40458885-40459062)
chr2 (514-681)||(11006977-11007142)
chr2 (511-678)||(13829851-13830018)
chr2 (528-682)||(32713013-32713168)
chr2 (511-649)||(27464572-27464710)
chr2 (510-683)||(3409187-3409360)
chr2 (565-689)||(1094419-1094543)
chr2 (514-683)||(10412408-10412577)
chr2 (511-683)||(36538624-36538796)
chr2 (511-683)||(41959111-41959283)
chr2 (511-682)||(34116173-34116344)
chr2 (510-683)||(27634639-27634812)
chr2 (511-683)||(33831463-33831635)
chr2 (520-683)||(26436322-26436484)
chr2 (510-680)||(11027879-11028049)
chr2 (564-681)||(12070567-12070684)
chr2 (511-680)||(27902439-27902607)
chr2 (511-689)||(29806879-29807046)
chr2 (512-678)||(30713129-30713295)
chr2 (571-680)||(2647034-2647143)
chr2 (514-671)||(44740486-44740643)
chr2 (553-680)||(38409613-38409740)
chr2 (574-683)||(2578047-2578156)
chr2 (555-687)||(2328335-2328467)
chr2 (515-651)||(24844670-24844806)
chr2 (511-641)||(16544016-16544146)
chr2 (573-683)||(34064673-34064783)
chr2 (521-674)||(17616244-17616397)
chr2 (605-683)||(39690138-39690216)
chr2 (550-611)||(31000880-31000941)
chr2 (563-683)||(14103235-14103355)
chr2 (521-641)||(33163990-33164110)
chr2 (626-681)||(18667721-18667776)
chr2 (511-622)||(20203714-20203825)
chr2 (511-626)||(28968845-28968960)
chr2 (508-579)||(40680281-40680352)
chr2 (520-639)||(41332243-41332362)
chr2 (626-681)||(44935737-44935792)
chr2 (519-600)||(9753157-9753238)
chr2 (572-637)||(17503437-17503502)
chr2 (626-683)||(33831395-33831452)
[»] scaffold0171 (1 HSPs)
scaffold0171 (511-667)||(21072-21227)
[»] scaffold0135 (1 HSPs)
scaffold0135 (520-685)||(32794-32957)
[»] chr8 (17 HSPs)
chr8 (515-687)||(22563970-22564142)
chr8 (508-683)||(453451-453626)
chr8 (508-649)||(1091729-1091870)
chr8 (511-680)||(33279977-33280146)
chr8 (520-612)||(43384833-43384925)
chr8 (510-612)||(12378391-12378493)
chr8 (511-683)||(3307902-3308074)
chr8 (520-683)||(11161540-11161703)
chr8 (557-649)||(27189128-27189220)
chr8 (520-680)||(34516109-34516269)
chr8 (511-611)||(39478090-39478190)
chr8 (571-685)||(43967476-43967590)
chr8 (555-674)||(23181132-23181251)
chr8 (574-685)||(34655001-34655112)
chr8 (572-683)||(9412585-9412696)
chr8 (608-654)||(28492749-28492795)
chr8 (635-689)||(39478052-39478106)
[»] scaffold0223 (1 HSPs)
scaffold0223 (510-680)||(14397-14567)
[»] scaffold0002 (1 HSPs)
scaffold0002 (511-683)||(96248-96420)
[»] scaffold0444 (1 HSPs)
scaffold0444 (569-685)||(825-941)
[»] scaffold0063 (1 HSPs)
scaffold0063 (520-679)||(51311-51470)
[»] scaffold0224 (1 HSPs)
scaffold0224 (553-683)||(7350-7480)
[»] scaffold0260 (2 HSPs)
scaffold0260 (520-681)||(11439-11600)
scaffold0260 (520-681)||(9961-10120)
[»] scaffold0204 (1 HSPs)
scaffold0204 (511-680)||(26621-26790)
[»] scaffold0316 (1 HSPs)
scaffold0316 (511-683)||(19264-19436)
[»] scaffold0022 (1 HSPs)
scaffold0022 (520-683)||(124490-124653)
[»] scaffold0263 (1 HSPs)
scaffold0263 (575-648)||(17238-17311)
[»] scaffold0954 (1 HSPs)
scaffold0954 (570-649)||(243-322)
[»] scaffold0025 (1 HSPs)
scaffold0025 (511-665)||(11376-11530)


Alignment Details
Target: chr4 (Bit Score: 338; Significance: 0; HSPs: 65)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 338; E-Value: 0
Query Start/End: Original strand, 1 - 404
Target Start/End: Complemental strand, 46356847 - 46356441
Alignment:
Q  1 gagttgagagaatcagagaggttgaggtagaagccttcgttggagaagagatcagagctggataatgcggggacaattccgatgagttggagaagaggag 100  Q
    ||||||||||||||||||||||||||||||||||||||||| || |||||||| ||||||||||| |||||||||||||| |||||||||||||||||||    
T  46356847 gagttgagagaatcagagaggttgaggtagaagccttcgtttgaaaagagatcggagctggataaagcggggacaattccaatgagttggagaagaggag 46356748  T
Q  101 aacggtggtcgccggtgacacgtgtatcggtgttcattgcttggaggagtttgaggattaggcctggtgttagtgaagccattgttgtgt-----tgtga 195  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     |||||    
T  46356747 aacggtggtcgccggtgacacgtgtatcggtgttcattgcttggaggagtttgaggattaggcctggtgttagtgaagccattgttgtgttgtgttgtga 46356648  T
Q  196 attgagttgggttgtgtctgtctgagagagatgttatacagagcagtttctgttctcttgtgttgtgttttttgaattcaaaatgttgatttgtccgttg 295  Q
    ||||||||||||||||  ||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  46356647 attgagttgggttgtg--tgtgtgagagagatgttatacagaggagtttctgttctcttgtgttgtgttttttgaattcaaaatgttgatttgtccgtta 46356550  T
Q  296 tgcctattatcacatcatagtgagtgatgccatttattttttgaattaactatctagatgcccactccaatacgttaccgttgaagaccgtaacgtttat 395  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||    
T  46356549 tgcctattatcacatcatagtgagtgatgccatttattttttgaattaactatctagatgcccactctaatacgttaccgttgaagactgtaacgtttat 46356450  T
Q  396 atttacctc 404  Q
    |||||||||    
T  46356449 atttacctc 46356441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 511 - 688
Target Start/End: Complemental strand, 1803633 - 1803461
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    ||||||||||||||||||||||||||||||||| | |||||||||||||     |||||||||||| ||||||||||||||||||||||| |||||||||    
T  1803633 tagggctgacaatgaaccgaaccaactcgaaaagagtgcgagattcgat-----aattgattcgttaaacttgattcatgaacctaatgagtcgaacttg 1803539  T
Q  611 agtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatgaaccag 688  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||    
T  1803538 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcataaaccag 1803461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 128; E-Value: 9e-66
Query Start/End: Original strand, 511 - 690
Target Start/End: Original strand, 24007903 - 24008082
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    ||||||||||||||||  ||||||||||||||||| | |||||||||||||||| |||||||||||||||||| ||||||||||||| || |  ||||||    
T  24007903 tagggctgacaatgaattgaaccaactcgaaaatagttcgagattcgatttgatgattgattcgttgaacttggttcatgaacctaacgagttaaacttg 24008002  T
Q  611 agtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatgaaccagcc 690  Q
    |||||||||||||| |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||    
T  24008003 agtttaaaattaagttcgttaaataaatgagttgaacttgagctaaatatggttcgactcgtttggttcatgaaccagcc 24008082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 520 - 689
Target Start/End: Original strand, 12673037 - 12673206
Alignment:
Q  520 caatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttgagtttaaaa 619  Q
    |||||||||||||||||||||||||| | |||||||||||| ||||||||| |||||||||||| |||||||||| ||||| ||||||||||||| ||||    
T  12673037 caatgaaccgaaccaactcgaaaatagttcgagattcgattcgataattgactcgttgaacttggttcatgaaccaaatgagtcgaacttgagttgaaaa 12673136  T
Q  620 ttaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatgaaccagc 689  Q
    |||||||| |||||||||||||| |||||| |  | | ||||||||||||||||||||||||||||||||    
T  12673137 ttaagctcattaaataaatgagtcgaacttgagttgagtatggttcgactcgtttggttcatgaaccagc 12673206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 511 - 689
Target Start/End: Complemental strand, 40797970 - 40797792
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    |||| ||| ||||||||||||||||||| |||||| | ||| | | |||| |||||||| ||| ||||||||| |||||||||| ||||| |||||||||    
T  40797970 taggactggcaatgaaccgaaccaactcaaaaatagttcgatacttgattcgataattggttcattgaacttggttcatgaaccaaatgagtcgaacttg 40797871  T
Q  611 agtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatgaaccagc 689  Q
    |||| |||||||||||||||||||||||||||||||||| |||| | ||||||||||||||||||||||||||||||||    
T  40797870 agttgaaaattaagctcgttaaataaatgagttgaacttgaacttagtatggttcgactcgtttggttcatgaaccagc 40797792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 511 - 689
Target Start/End: Original strand, 46944544 - 46944722
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    |||||||||||||||||||||||||||| |||||| | |||||||||||| ||||||||  |||||||||||| |||||||||| ||||| |||||||||    
T  46944544 tagggctgacaatgaaccgaaccaactcaaaaatagttcgagattcgattcgataattggctcgttgaacttggttcatgaaccaaatgagtcgaacttg 46944643  T
Q  611 agtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatgaaccagc 689  Q
    |||| ||| ||||||||||||||||||| ||| |||||| |  | | ||||||||||||||||||||||||||||||||    
T  46944644 agttgaaatttaagctcgttaaataaataagtcgaacttgagttgagtatggttcgactcgtttggttcatgaaccagc 46944722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 511 - 689
Target Start/End: Complemental strand, 80637 - 80459
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    |||||||| ||||||||||| |||||||||||||| | ||| ||| |||| | |||||| ||||||||||||| |||||||||| ||||| |||||||||    
T  80637 tagggctggcaatgaaccgatccaactcgaaaatagttcgaaatttgattcggtaattgtttcgttgaacttggttcatgaaccaaatgagtcgaacttg 80538  T
Q  611 agtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatgaaccagc 689  Q
    |||| |||||||||||||| |||||||||||  |||||| |||||  |||  |||||||||||||||||||||||||||    
T  80537 agttgaaaattaagctcgtcaaataaatgagccgaacttgaactacgtataattcgactcgtttggttcatgaaccagc 80459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 520 - 689
Target Start/End: Complemental strand, 51995209 - 51995040
Alignment:
Q  520 caatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttgagtttaaaa 619  Q
    |||||||||||||||||||||||||| | ||||| |||||| ||||||| |||||||||||||| |||||||||| |||||  |||||||||| | ||||    
T  51995209 caatgaaccgaaccaactcgaaaatagttcgagactcgattcgataattaattcgttgaacttggttcatgaaccaaatgagccgaacttgagctcaaaa 51995110  T
Q  620 ttaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatgaaccagc 689  Q
    ||||| | |||||||||| ||||||||||| |||||  | ||  ||||||||||||||||||||||||||    
T  51995109 ttaagtttgttaaataaacgagttgaacttgaactatgtttgactcgactcgtttggttcatgaaccagc 51995040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 508 - 689
Target Start/End: Original strand, 55891982 - 55892163
Alignment:
Q  508 aactagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaac 607  Q
    |||||||||||||||||||| |||||||||| |||||| | ||||| |||||| | ||||| |||||||||||||| |||||||||| || || ||||||    
T  55891982 aactagggctgacaatgaactgaaccaactcaaaaatagttcgagactcgattcggtaattaattcgttgaacttggttcatgaaccaaacgagtcgaac 55892081  T
Q  608 ttgagtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatgaaccagc 689  Q
     || ||||||||||||| |||| ||| ||||||||||||||| | | || ||| |||| | |||||||||||||||||||||    
T  55892082 ctgggtttaaaattaagttcgtcaaacaaatgagttgaacttgagccaagtatagttcaattcgtttggttcatgaaccagc 55892163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 511 - 655
Target Start/End: Complemental strand, 13455841 - 13455697
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    ||||||||||||| ||||||||||||| |||||||||  ||||||||||| ||||||| ||||||||||||||||| ||||||| ||||| || ||||||    
T  13455841 tagggctgacaataaaccgaaccaacttgaaaataatttgagattcgattcgataattaattcgttgaacttgatttatgaaccaaatgagtccaacttg 13455742  T
Q  611 agtttaaaattaagctcgttaaataaatgagttgaacttaaacta 655  Q
    || | ||||||||| |||||||||||| ||||||||||| |||||    
T  13455741 agctcaaaattaagttcgttaaataaacgagttgaacttgaacta 13455697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 520 - 685
Target Start/End: Original strand, 9222141 - 9222304
Alignment:
Q  520 caatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttgagtttaaaa 619  Q
    |||||||||||||||||||||||||| | ||| | |||||| || ||||| ||||||||||||| ||||   ||| ||||| |||||||||||||  |||    
T  9222141 caatgaaccgaaccaactcgaaaatagttcgatactcgattcgacaattggttcgttgaacttggttcac--accaaatgagtcgaacttgagttgtaaa 9222238  T
Q  620 ttaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatgaac 685  Q
    ||||||||||||||||||||| |||||||| |||| | ||||||||||||||| ||||||||||||    
T  9222239 ttaagctcgttaaataaatgaattgaacttgaacttagtatggttcgactcgtctggttcatgaac 9222304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 511 - 689
Target Start/End: Complemental strand, 25134702 - 25134536
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    ||||||||||||||||||||||||||||||||||| |            | |||||||| ||  ||| ||||| |||||||||| ||||| |||||||||    
T  25134702 tagggctgacaatgaaccgaaccaactcgaaaatagt------------tggataattggtttattggacttggttcatgaaccaaatgagtcgaacttg 25134615  T
Q  611 agtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatgaaccagc 689  Q
    |||| ||||||||| |||||||||||||||||||||||| |||| | ||||||||||||||||||||||||||||||||    
T  25134614 agttgaaaattaagttcgttaaataaatgagttgaacttgaacttagtatggttcgactcgtttggttcatgaaccagc 25134536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 511 - 672
Target Start/End: Original strand, 51407949 - 51408110
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    ||||||||||||||||| ||||||||||||||||| | ||||| |||||| | ||||| ||||||| |||||| |||||||||| ||||| |||||| ||    
T  51407949 tagggctgacaatgaactgaaccaactcgaaaatagttcgagactcgattcggtaattaattcgttcaacttggttcatgaaccaaatgagtcgaacctg 51408048  T
Q  611 agtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgt 672  Q
     ||||||||||||| |||| ||| ||||||||||||||| ||| || ||| |||||||||||    
T  51408049 ggtttaaaattaagttcgtcaaacaaatgagttgaacttgaaccaagtatagttcgactcgt 51408110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 511 - 680
Target Start/End: Original strand, 48802475 - 48802645
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgtt-gaacttgattcatgaacctaatgaatcgaactt 609  Q
    ||||||||||||||||||||||||||||||||||| | ||| | |||||||| | |||||||  || |||||||||||||||||| ||||| ||||||||    
T  48802475 tagggctgacaatgaaccgaaccaactcgaaaatagttcgaaactcgatttggttattgatttttttgaacttgattcatgaaccaaatgagtcgaactt 48802574  T
Q  610 gagtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttca 680  Q
    ||||  |||||||||||||| |||||||||||  |||||| | |||   || |||||||||||||||||||    
T  48802575 gagtcgaaaattaagctcgtcaaataaatgagccgaacttgagctatgaatagttcgactcgtttggttca 48802645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 517 - 661
Target Start/End: Original strand, 34980510 - 34980654
Alignment:
Q  517 tgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttgagttta 616  Q
    ||||| |||||| |||||||||||||||| |  |||| |||||| |||||||||||| |||||||||||||||||| | ||||||||||||||||||| |    
T  34980510 tgacagtgaaccaaaccaactcgaaaatagtttgagactcgattcgataattgattcattgaacttgattcatgaatcaaatgaatcgaacttgagttga 34980609  T
Q  617 aaattaagctcgttaaataaatgagttgaacttaaactaaatatg 661  Q
    ||||||| |||| |||||||||||||| || || | |||||||||    
T  34980610 aaattaaactcgctaaataaatgagttaaatttgagctaaatatg 34980654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 511 - 689
Target Start/End: Original strand, 28265673 - 28265848
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    |||||||| |||||||| ||||||||||||||||| | ||||| |||||| | ||||| |||||||||||||| |||||||||| || ||   |||  ||    
T  28265673 tagggctggcaatgaactgaaccaactcgaaaatagttcgagactcgattcggtaattaattcgttgaacttggttcatgaaccaaacga---gaatctg 28265769  T
Q  611 agtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatgaaccagc 689  Q
    |||||||||||||| |||| ||| ||||||||||||||| | | || | | |||||||||||||||||||||| |||||    
T  28265770 agtttaaaattaagttcgtcaaacaaatgagttgaacttgagccaagtgtagttcgactcgtttggttcatgagccagc 28265848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 511 - 641
Target Start/End: Original strand, 49405635 - 49405765
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    |||||||||||||||||||||||||| |||||||| | ||| | |||||| | |||||||||||||||||||| || ||||||| ||||| |||||||||    
T  49405635 tagggctgacaatgaaccgaaccaacccgaaaatagttcgaaactcgattcggtaattgattcgttgaacttggtttatgaaccaaatgagtcgaacttg 49405734  T
Q  611 agtttaaaattaagctcgttaaataaatgag 641  Q
    | |  |||||||||||||| |||||||||||    
T  49405735 aatcgaaaattaagctcgtcaaataaatgag 49405765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 511 - 687
Target Start/End: Original strand, 50710784 - 50710946
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    ||||||||||||||||||||| ||||||||||||| | ||| | ||||||||||||||| |||              ||||| | ||||| ||||| |||    
T  50710784 tagggctgacaatgaaccgaatcaactcgaaaatagttcgatactcgatttgataattggttc--------------atgaatcaaatgagtcgaaattg 50710869  T
Q  611 agtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatgaacca 687  Q
    |||| ||||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||||| ||||||||    
T  50710870 agttgaaaattaagctcgttaaataaataagttgaacttaaacttagtatggttcgactcgtttggtttatgaacca 50710946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 511 - 683
Target Start/End: Original strand, 15697083 - 15697255
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    ||||||||||||||||||||  ||||||||| | | | ||||| |||| | || |||||||||||||||||||||||||||||| ||| |   |||||||    
T  15697083 tagggctgacaatgaaccgagacaactcgaataaagttcgagactcgactcgacaattgattcgttgaacttgattcatgaaccaaataagctgaacttg 15697182  T
Q  611 agtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatga 683  Q
    || | ||||||||| ||||||| | |||||| ||||| | ||||||| || || |||||||||||||||||||    
T  15697183 agctaaaaattaagttcgttaacttaatgagctgaacatgaactaaacatagtccgactcgtttggttcatga 15697255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 509 - 683
Target Start/End: Original strand, 11055224 - 11055398
Alignment:
Q  509 actagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaact 608  Q
    |||||||||||||||||||||||||||||||| |||| | ||  | |||||| ||||||| | || ||||||||| |||||||||| |||||   |||||    
T  11055224 actagggctgacaatgaaccgaaccaactcgacaatagttcggaactcgattcgataattaactcattgaacttggttcatgaaccaaatgagctgaact 11055323  T
Q  609 tgagtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatga 683  Q
    ||||   ||||||||| ||||||||||||||||  |||||| | ||  |||| |||||||||| |||||||||||    
T  11055324 tgagcggaaaattaagttcgttaaataaatgagccgaacttgagctgtatatagttcgactcgattggttcatga 11055398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 508 - 680
Target Start/End: Original strand, 36156291 - 36156463
Alignment:
Q  508 aactagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaac 607  Q
    |||||| | ||||||||||||||||||||||||  | | | ||  |||||||| || ||||||||||||||||||| ||| |||||| |||||  |||||    
T  36156291 aactagcgttgacaatgaaccgaaccaactcgattaaagttcgtaattcgattcgacaattgattcgttgaacttggttcttgaaccaaatgagccgaac 36156390  T
Q  608 ttgagtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttca 680  Q
    ||||| | ||||||||| |||| || ||| |||| ||||||| ||||| || | |||||||||||||||||||    
T  36156391 ttgagctgaaaattaagttcgtcaactaattgagctgaacttgaactatatgtagttcgactcgtttggttca 36156463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 569 - 685
Target Start/End: Complemental strand, 44378332 - 44378216
Alignment:
Q  569 gattcgttgaacttgattcatgaacctaatgaatcgaacttgagtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgac 668  Q
    ||||||||||||||| |||||||||| ||||| | ||| ||| ||| |||||||||||||||||||||||||||||||||| | |||| |||  ||||||    
T  44378332 gattcgttgaacttggttcatgaaccaaatgagttgaatttgggttgaaaattaagctcgttaaataaatgagttgaacttgagctaagtataattcgac 44378233  T
Q  669 tcgtttggttcatgaac 685  Q
    |||| ||||||||||||    
T  44378232 tcgtctggttcatgaac 44378216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 511 - 683
Target Start/End: Complemental strand, 48977716 - 48977544
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    |||||||| |||||||||||||||||||||  ||||| ||| |||||| | |||| || |||||||||||||  ||||||||||||||||   | || ||    
T  48977716 tagggctggcaatgaaccgaaccaactcgattataattcgacattcgactcgatatttaattcgttgaacttcgttcatgaacctaatgagctggacatg 48977617  T
Q  611 agtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatga 683  Q
    || | ||||||||  ||||||| |||||||| ||||||| | ||| |||| |||||||||||| |||||||||    
T  48977616 agctgaaaattaaattcgttaattaaatgagctgaacttgagctacatatagttcgactcgttcggttcatga 48977544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 414 - 509
Target Start/End: Complemental strand, 46356417 - 46356322
Alignment:
Q  414 caagggaaaaataaagaacaagaaaggnnnnnnnncagaggcttaagtggaaataaactgagttagcatctacttccttcggccatcatatcctaa 509  Q
    |||||||||||||||||||||||||||        ||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  46356417 caagggaaaaataaagaacaagaaaggaaaaaaaacagtggcttaagtggaaataaactgagttaccatctacttccttcggccatcatatcctaa 46356322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 505 - 683
Target Start/End: Complemental strand, 53370018 - 53369840
Alignment:
Q  505 cctaactagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcg 604  Q
    ||||| |||||||| |||||||||||||||||||||  ||| | ||| |||| | | |||| || || ||||||||||| ||||||||||||| ||   |    
T  53370018 cctaattagggctggcaatgaaccgaaccaactcgattatagttcgacattcaactcgatatttaatccgttgaacttggttcatgaacctaacgagctg 53369919  T
Q  605 aacttgagtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatga 683  Q
     ||||||| | ||||||||| ||||||| |||||||| ||||||| | ||| |||| |||||||||||| |||||||||    
T  53369918 gacttgagctgaaaattaagttcgttaattaaatgagctgaacttgagctacatatagttcgactcgttaggttcatga 53369840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 511 - 683
Target Start/End: Complemental strand, 9469917 - 9469745
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    ||||||||||||||||||||||||||||||| ||| | ||  |||||| | || ||||| |   ||||||||| |||||||||| |||||  | ||||||    
T  9469917 tagggctgacaatgaaccgaaccaactcgaatatagttcgtaattcgactcgacaattggtctattgaacttggttcatgaaccaaatgagccaaacttg 9469818  T
Q  611 agtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatga 683  Q
    || | ||||||||| ||||| | |||||||| ||||||| ||||| | ||||||||| ||||| |||||||||    
T  9469817 agctgaaaattaagttcgttgattaaatgagctgaacttgaactatagatggttcgattcgttaggttcatga 9469745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 512 - 680
Target Start/End: Original strand, 19455159 - 19455327
Alignment:
Q  512 agggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttga 611  Q
    ||||||||||||||||||| |  | ||||||||| | ||| | ||||||||| |||| |||||||||||||| |||||||| | |||||   ||||||||    
T  19455159 agggctgacaatgaaccgagcttattcgaaaatagttcgaaactcgatttgacaattaattcgttgaacttggttcatgaatcaaatgagctgaacttga 19455258  T
Q  612 gtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttca 680  Q
    ||| ||||||||| | ||||  |||||||||||||||| | ||| |||  |||||||| ||||||||||    
T  19455259 gttgaaaattaagtttgttatctaaatgagttgaacttgagctatatacagttcgacttgtttggttca 19455327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 511 - 683
Target Start/End: Complemental strand, 21441721 - 21441549
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    ||||| ||||||||||||||||||||||||  ||| | ||| |||||| | ||||  | || ||||||||||| ||||||||||||| ||   | |||||    
T  21441721 tagggttgacaatgaaccgaaccaactcgattatagttcgacattcgactcgatatctaatccgttgaacttggttcatgaacctaacgagctggacttg 21441622  T
Q  611 agtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatga 683  Q
    || | ||||||||| ||||||| |||||||| ||||||| | ||| |||| |||||||||||| |||||||||    
T  21441621 agctgaaaattaagttcgttaattaaatgagctgaacttgagctacatatagttcgactcgttaggttcatga 21441549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 517 - 689
Target Start/End: Original strand, 25102603 - 25102775
Alignment:
Q  517 tgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttgagttta 616  Q
    |||||||||||||||||||| | |||||||  ||| |||    | ||||| ||||| ||||   ||| |||||||||| |||||  |||| ||||||| |    
T  25102603 tgacaatgaaccgaaccaacacaaaaataactcgatatttagctcgataaatgatttgttgcgtttggttcatgaaccaaatgagccgaaattgagttga 25102702  T
Q  617 aaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatgaaccagc 689  Q
    | ||||| || ||||||||||||||||||| ||||||||| |||||||| |||||||||||| ||||||||||    
T  25102703 acattaaacttgttaaataaatgagttgaatttaaactaagtatggttcaactcgtttggtttatgaaccagc 25102775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 509 - 683
Target Start/End: Complemental strand, 19853120 - 19852946
Alignment:
Q  509 actagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaact 608  Q
    |||||||||| ||||||| |||||||||||||  ||| |  || |||||| | |||| || || ||||||||||| ||||||||||||| ||   | |||    
T  19853120 actagggctgtcaatgaatcgaaccaactcgattatagtttgacattcgactcgatatttaatccgttgaacttggttcatgaacctaacgagatggact 19853021  T
Q  609 tgagtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatga 683  Q
    |||| | ||||||||| ||||||| |||||||| ||||||| | ||| |||| |||||||||||| |||||||||    
T  19853020 tgagctgaaaattaagttcgttaattaaatgagctgaacttgagctacatatagttcgactcgttaggttcatga 19852946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 511 - 681
Target Start/End: Complemental strand, 22184643 - 22184473
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    |||||||| ||||||||||||||||||||| |||| |  | || |||||| || |||| | |||||||||||| |||||||||| || ||   |||||||    
T  22184643 tagggctggcaatgaaccgaaccaactcgacaatagtttgggactcgattcgacaattaactcgttgaacttggttcatgaaccaaacgagctgaacttg 22184544  T
Q  611 agtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcat 681  Q
    || | ||||||||| |||||||| ||||||| ||||||| ||||  |||| |||||||||  |||||||||    
T  22184543 agctgaaaattaagttcgttaaacaaatgagctgaacttgaactttatatagttcgactcagttggttcat 22184473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 511 - 680
Target Start/End: Original strand, 48339099 - 48339268
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    |||||||||||||||| ||||||||||| |  | | | ||  |||||||| || || ||||| |||||||||| |||||||| | ||||| |||||||||    
T  48339099 tagggctgacaatgaatcgaaccaactcaattagagttcgtaattcgattcgacaactgatttgttgaacttggttcatgaatcaaatgagtcgaacttg 48339198  T
Q  611 agtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttca 680  Q
    || | ||||||||| |||| || ||| |||| ||||||||| ||| || | |||||||||||||||||||    
T  48339199 agctgaaaattaagttcgtcaactaattgagctgaacttaagctatatgtagttcgactcgtttggttca 48339268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 511 - 683
Target Start/End: Complemental strand, 36543921 - 36543749
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    ||||||||||||||||| ||||||||||||| ||| | ||  |||||| | || ||||| | | ||||||||| |||||||||| ||| |  | ||||||    
T  36543921 tagggctgacaatgaactgaaccaactcgaatatagttcgtaattcgactcgacaattggtccattgaacttggttcatgaaccaaataagccaaacttg 36543822  T
Q  611 agtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatga 683  Q
    || | ||||||||| ||||||| |||||||| ||||||| ||||| | ||||||||| | ||| |||||||||    
T  36543821 agctgaaaattaagttcgttaattaaatgagctgaacttgaactatagatggttcgatttgttaggttcatga 36543749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 511 - 683
Target Start/End: Complemental strand, 45674975 - 45674803
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    |||||||| |||||||||||||||||||||  ||| | ||| |||||| | ||||  | || ||| ||||||| ||||||||||||| ||   | |||||    
T  45674975 tagggctggcaatgaaccgaaccaactcgattatagttcgacattcgactcgatatctaatccgtcgaacttggttcatgaacctaacgagctggacttg 45674876  T
Q  611 agtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatga 683  Q
    || | ||||||||  ||||||| |||||||||||||||| | ||| |||| |||||||||||| |||||||||    
T  45674875 agctgaaaattaaattcgttaattaaatgagttgaacttgagctacatatagttcgactcgttaggttcatga 45674803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 508 - 680
Target Start/End: Original strand, 50146915 - 50147087
Alignment:
Q  508 aactagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaac 607  Q
    ||||||||||  |||||||||||||||| ||||  | | | ||  |||||||| || ||||||||||||||||||| |||||||||| |||||| || ||    
T  50146915 aactagggctagcaatgaaccgaaccaattcgattaaagttcgtaattcgattcgacaattgattcgttgaacttggttcatgaaccaaatgaaccggac 50147014  T
Q  608 ttgagtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttca 680  Q
    ||||| | ||||||||| |||| || ||| |||| |||||||||  || || | ||||| |||||||||||||    
T  50147015 ttgagctgaaaattaagttcgtgaactaattgagctgaacttaagttatatgtagttcggctcgtttggttca 50147087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 550 - 683
Target Start/End: Original strand, 43798262 - 43798395
Alignment:
Q  550 gagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttgagtttaaaattaagctcgttaaataaatgagttgaactt 649  Q
    |||| |||||| ||||||| | |||||||||| | ||| |||||| ||||| |||| |||||||  ||||| ||| || |||||||||||||||||||||    
T  43798262 gagactcgattcgataattaactcgttgaactcggttcttgaaccaaatgagtcgagcttgagtaaaaaatgaagatcattaaataaatgagttgaactt 43798361  T
Q  650 aaactaaatatggttcgactcgtttggttcatga 683  Q
     | |||  ||| ||||||||||||||||||||||    
T  43798362 gagctatgtatagttcgactcgtttggttcatga 43798395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 511 - 683
Target Start/End: Complemental strand, 50606148 - 50605976
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    |||||||| |||||||||||||||| ||||  ||| | ||| |||||| | ||||  | || ||||||||||| ||||||||||||| ||   | |||||    
T  50606148 tagggctggcaatgaaccgaaccaattcgattatagttcgacattcgactcgatatctaatccgttgaacttggttcatgaacctaacgagctggacttg 50606049  T
Q  611 agtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatga 683  Q
    || | ||||||||| ||||||| |||||||| ||||||| | ||| |||| |||||||||||| |||| ||||    
T  50606048 agctgaaaattaagttcgttaattaaatgagctgaacttgagctacatatagttcgactcgttaggtttatga 50605976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 511 - 683
Target Start/End: Complemental strand, 52813741 - 52813569
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    ||||| |||||||||||||||||||||||| |||| |  | || || |||||| |||| | |||||||||||| |||||||||| || ||   ||||||     
T  52813741 tagggttgacaatgaaccgaaccaactcgacaatagtttgggactctatttgacaattaactcgttgaacttggttcatgaaccaaacgagctgaactta 52813642  T
Q  611 agtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatga 683  Q
    || | ||||||||| |||||||| ||||||| ||||||| | ||  |||| |||||| ||| |||||||||||    
T  52813641 agctgaaaattaagttcgttaaacaaatgagctgaacttgagctttatatagttcgattcggttggttcatga 52813569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 517 - 652
Target Start/End: Original strand, 52733707 - 52733841
Alignment:
Q  517 tgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttgagttta 616  Q
    ||||||||||| |||||||||  | |||||| ||| ||| |||| ||||||| | |||||||| || ||||||||||| ||||| | ||| ||||| | |    
T  52733707 tgacaatgaactgaaccaacttaataataattcgaaatttgattcgataattaactcgttgaatttaattcatgaaccaaatgagttgaa-ttgagctga 52733805  T
Q  617 aaattaagctcgttaaataaatgagttgaacttaaa 652  Q
    |||||||| ||||||||||||| |||||||||||||    
T  52733806 aaattaagttcgttaaataaataagttgaacttaaa 52733841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 511 - 681
Target Start/End: Complemental strand, 56224285 - 56224115
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    |||||||||||||||||||||||||||| || ||| | ||| | | || |  | |||| |||||||||||||| || || |||| |||||  ||||||||    
T  56224285 tagggctgacaatgaaccgaaccaactcaaacatagttcgaaacttgactcaacaattaattcgttgaacttggttaataaaccaaatgagccgaacttg 56224186  T
Q  611 agtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcat 681  Q
    || | ||||||||  ||||||| ||||| |||||||||| ||||| ||||  ||||| | |||||||||||    
T  56224185 agctgaaaattaaattcgttaattaaataagttgaacttgaactatatataattcgatttgtttggttcat 56224115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 510 - 649
Target Start/End: Original strand, 12789551 - 12789690
Alignment:
Q  510 ctagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaactt 609  Q
    ||||||||| |||||||||||||||||||||  ||| | ||| |||||| | ||||  | || ||||||||||| || |||||||||| ||   ||||||    
T  12789551 ctagggctggcaatgaaccgaaccaactcgattatagttcgacattcgactcgatatctaatccgttgaacttggtttatgaacctaacgagctgaactt 12789650  T
Q  610 gagtttaaaattaagctcgttaaataaatgagttgaactt 649  Q
    ||| | ||||||||| ||||||| |||||||| |||||||    
T  12789651 gagctgaaaattaagttcgttaattaaatgagctgaactt 12789690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 571 - 649
Target Start/End: Complemental strand, 7505609 - 7505531
Alignment:
Q  571 ttcgttgaacttgattcatgaacctaatgaatcgaacttgagtttaaaattaagctcgttaaataaatgagttgaactt 649  Q
    |||||||||||||||||||||||| |||||  |||||||||| | ||||||||  ||||||| ||||||||||||||||    
T  7505609 ttcgttgaacttgattcatgaaccaaatgagccgaacttgagctaaaaattaaattcgttaactaaatgagttgaactt 7505531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 511 - 649
Target Start/End: Original strand, 9906356 - 9906494
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    |||||||||||||||||  ||||||||  |||||| |  |||||| ||||   |||||  |||||||||||||||||||||    ||||| |||||||||    
T  9906356 tagggctgacaatgaactaaaccaacttaaaaatagtttgagatttgattcagtaattagttcgttgaacttgattcatgacttaaatgattcgaacttg 9906455  T
Q  611 agtttaaaattaagctcgttaaataaatgagttgaactt 649  Q
    |||| |||||||| ||| ||| |||||| ||||||||||    
T  9906456 agttgaaaattaaactcattatataaataagttgaactt 9906494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 509 - 683
Target Start/End: Complemental strand, 22721469 - 22721296
Alignment:
Q  509 actagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaact 608  Q
    |||||||||| ||||||| |||  ||||||||| | | | ||  | |||||| | |||||  ||| ||||||||| |||||||||| || ||  | ||||    
T  22721469 actagggctggcaatgaatcgagacaactcgaataaagttcggaactcgattcggtaattagttcattgaacttggttcatgaaccaaacgaggcaaact 22721370  T
Q  609 tgagtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatga 683  Q
    | || | ||||||||| |||||||||||||||||||||||| |  || |||| ||||||||||||||||||||||    
T  22721369 taagct-aaaattaagttcgttaaataaatgagttgaacttgagttatatatagttcgactcgtttggttcatga 22721296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 511 - 641
Target Start/End: Original strand, 48731173 - 48731303
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    |||||||| |||||||||||||||||||||| ||| | ||| |||||| | || ||||| | | ||||| ||| |||||||||| ||| ||  |||||||    
T  48731173 tagggctgccaatgaaccgaaccaactcgaatatagttcgaaattcgactcgacaattggtccattgaatttggttcatgaaccaaataaactgaacttg 48731272  T
Q  611 agtttaaaattaagctcgttaaataaatgag 641  Q
    || | ||||||||| ||||||| ||||||||    
T  48731273 agctaaaaattaagttcgttaattaaatgag 48731303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 520 - 689
Target Start/End: Complemental strand, 39736814 - 39736645
Alignment:
Q  520 caatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttgagtttaaaa 619  Q
    |||| ||| ||| ||||||||||||| |  |||| |||||| |||||||||||||||||| ||| |||| | ||| ||| | |||||||||| || ||||    
T  39736814 caataaactgaatcaactcgaaaatagtttgagactcgattcgataattgattcgttgaatttggttcacggaccaaataagtcgaacttgaattaaaaa 39736715  T
Q  620 ttaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatgaaccagc 689  Q
    ||||| | |||||||||| ||||| || || | |||  |||| |||||||  |||  |||||||||||||    
T  39736714 ttaagtttgttaaataaacgagttaaatttgagctatgtatgattcgacttatttaattcatgaaccagc 39736645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 511 - 683
Target Start/End: Complemental strand, 26633076 - 26632904
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    |||||| | ||||||||||||||||||||| |||| | ||  | |||||| || |||| | ||||||||||||  |||| |||| |||||   |||||||    
T  26633076 tagggccggcaatgaaccgaaccaactcgataatagttcgtaactcgattcgacaattaactcgttgaacttggctcattaaccaaatgagctgaacttg 26632977  T
Q  611 agtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatga 683  Q
    || | ||||||||| ||||||||||||||||  |||||| || || |||| || |||||   |||||||||||    
T  26632976 agctgaaaattaagttcgttaaataaatgagccgaacttgaattacatatagtccgacttagttggttcatga 26632904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 524 - 683
Target Start/End: Original strand, 44791256 - 44791415
Alignment:
Q  524 gaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttgagtttaaaattaa 623  Q
    |||||||||||||||||  ||| | ||| |||||| | ||||  | || ||||||||||| ||||||||||||| ||   | ||||||  | ||||||||    
T  44791256 gaaccgaaccaactcgattatagttcgacattcgactcgatatctaatccgttgaacttggttcatgaacctaacgagctgcacttgaactgaaaattaa 44791355  T
Q  624 gctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatga 683  Q
    | ||||||| |||||||| |||| || | ||| |||| |||||||||||| |||||||||    
T  44791356 gttcgttaattaaatgagctgaatttgagctacatatagttcgactcgttaggttcatga 44791415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 510 - 679
Target Start/End: Complemental strand, 24550218 - 24550049
Alignment:
Q  510 ctagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattc-atgaacctaatgaatcgaact 608  Q
    |||||||| |||||||| | ||||| ||| |||| ||| ||| |||||| | | |||||||||||||||||||||||  || |||| | ||| | |||||    
T  24550218 ctagggctaacaatgaatcaaaccagctcaaaaa-aattcgacattcgactcggtaattgattcgttgaacttgattttataaaccaactgagttgaact 24550120  T
Q  609 tgagtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttc 679  Q
    |||| | ||||||||| | ||||| |||||||||||||||| |  ||  ||| | ||||||||||||||||    
T  24550119 tgagctaaaaattaagtttgttaactaaatgagttgaacttgagttatgtatagctcgactcgtttggttc 24550049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 573 - 683
Target Start/End: Complemental strand, 49821060 - 49820950
Alignment:
Q  573 cgttgaacttgattcatgaacctaatgaatcgaacttgagtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgt 672  Q
    ||||||||||| ||||||||||||| ||   | |||| || | ||||||||| ||||||| |||||||| ||||||| | ||| |||| |||||||||||    
T  49821060 cgttgaacttggttcatgaacctaacgagctggacttaagctgaaaattaagttcgttaattaaatgagctgaacttgagctacatatagttcgactcgt 49820961  T
Q  673 ttggttcatga 683  Q
    | |||||||||    
T  49820960 taggttcatga 49820950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 571 - 685
Target Start/End: Complemental strand, 52706297 - 52706183
Alignment:
Q  571 ttcgttgaacttgattcatgaacctaatgaatcgaacttgagtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactc 670  Q
    |||||| |||||| |||||||||| || ||  |||||||||| | || |||||| ||||||| |||||||||||||||| |  || |||| |||||||||    
T  52706297 ttcgttaaacttggttcatgaaccaaacgagccgaacttgagctaaagattaagttcgttaactaaatgagttgaacttgagttatatatagttcgactc 52706198  T
Q  671 gtttggttcatgaac 685  Q
    ||||| |||| ||||    
T  52706197 gtttgattcacgaac 52706183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 511 - 649
Target Start/End: Original strand, 6866109 - 6866241
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    ||||| ||||||||||||||||||||||||   |||    || || |||| ||||||||||||||  |||||| |||||||||| |||||  ||||||||    
T  6866109 tagggttgacaatgaaccgaaccaactcgat--taa----agttttgattcgataattgattcgtcaaacttggttcatgaaccaaatgagccgaacttg 6866202  T
Q  611 agtttaaaattaagctcgttaaataaatgagttgaactt 649  Q
    || | ||||||||| |||| || ||| |||| |||||||    
T  6866203 agctgaaaattaagttcgtcaactaattgagctgaactt 6866241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 515 - 609
Target Start/End: Original strand, 9874212 - 9874306
Alignment:
Q  515 gctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaactt 609  Q
    |||||||||||||||||||||||| |||||| | | ||||||||||   ||||| |||||||||| ||| | |||||||| |||||  |||||||    
T  9874212 gctgacaatgaaccgaaccaactcaaaaatagttcaagattcgattcagtaattaattcgttgaaattggtacatgaaccaaatgagccgaactt 9874306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 514 - 683
Target Start/End: Complemental strand, 27891523 - 27891355
Alignment:
Q  514 ggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttgagt 613  Q
    ||||||||||||| |||| |||||||| |||| | ||  | |||||| || |||| | |||||||||||| |||||||| | |||||   |||||||||     
T  27891523 ggctgacaatgaatcgaatcaactcgacaatagttcggaactcgattcgacaattaactcgttgaacttggttcatgaa-caaatgagctgaacttgagc 27891425  T
Q  614 ttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatga 683  Q
    | ||||| ||  | |||||||||||||| |||| || || |  |||| |||||||||| |||||||||||    
T  27891424 tgaaaatcaaatttgttaaataaatgagctgaatttgaattttatatagttcgactcggttggttcatga 27891355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 511 - 600
Target Start/End: Original strand, 36643985 - 36644073
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatga 600  Q
    ||||||||||||| |||||||||||||| |||||| | ||||| || ||||||||||| | || ||||||||  |||||||||| |||||    
T  36643985 tagggctgacaatcaaccgaaccaactccaaaatagttcgagactc-atttgataattaactcattgaactttgttcatgaaccaaatga 36644073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 555 - 680
Target Start/End: Original strand, 43812101 - 43812226
Alignment:
Q  555 tcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttgagtttaaaattaagctcgttaaataaatgagttgaacttaaact 654  Q
    |||||| || ||||||||||| ||||||| |||||||||| ||||   ||||||| |  | ||||||||| |||| || ||| |||| ||||||| ||||    
T  43812101 tcgattcgacaattgattcgtcgaacttggttcatgaaccaaatgggccgaacttaaactgaaaattaagttcgtaaactaattgagctgaacttgaact 43812200  T
Q  655 aaatatggttcgactcgtttggttca 680  Q
    | || | ||||||||||||| |||||    
T  43812201 agatgtagttcgactcgtttagttca 43812226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 606 - 683
Target Start/End: Complemental strand, 53369733 - 53369656
Alignment:
Q  606 acttgagtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatga 683  Q
    ||||||| | ||||||||| ||||||| |||||||| ||||||| | ||| |||| |||||||||||| |||||||||    
T  53369733 acttgagctgaaaattaagttcgttaattaaatgagctgaacttgagctacatatagttcgactcgttaggttcatga 53369656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 511 - 612
Target Start/End: Original strand, 4274556 - 4274657
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    |||||||  |||||||||||||||||||||||||| | ||| | | |||| || ||||   ||||||||| ||||||||||| | |||||  ||||||||    
T  4274556 tagggctagcaatgaaccgaaccaactcgaaaatagttcgaaacttgattcgacaattatctcgttgaacctgattcatgaaacaaatgagccgaacttg 4274655  T
Q  611 ag 612  Q
    ||    
T  4274656 ag 4274657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 511 - 592
Target Start/End: Complemental strand, 9959471 - 9959391
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaa 592  Q
    |||||||||||||||||||||||||||||| |||| | ||| | ||||||  |||| | | |||||||||||| ||||||||    
T  9959471 tagggctgacaatgaaccgaaccaactcgacaatagttcgaaactcgattctataaataactcgttgaacttg-ttcatgaa 9959391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 516 - 600
Target Start/End: Complemental strand, 28470953 - 28470870
Alignment:
Q  516 ctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatga 600  Q
    ||||||||||||  |||||||||||||| | | ||| | |||||| | ||||| |||||||||||||| |||||||||| |||||    
T  28470953 ctgacaatgaactaaaccaactcgaaaaaagtacga-actcgattcggtaattaattcgttgaacttggttcatgaaccaaatga 28470870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 517 - 637
Target Start/End: Complemental strand, 50137527 - 50137407
Alignment:
Q  517 tgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttgagttta 616  Q
    ||||||||||| ||| ||| || |||||||| |   |||| ||||  ||||| |||||||||  ||| || |||||||  |||| ||||||||||| | |    
T  50137527 tgacaatgaactgaatcaattcaaaaataattcagaattcaatttagtaattaattcgttgattttggtttatgaaccagatgagtcgaacttgaggtga 50137428  T
Q  617 aaattaagctcgttaaataaa 637  Q
    ||||||| |||||||||||||    
T  50137427 aaattaaactcgttaaataaa 50137407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 609 - 681
Target Start/End: Complemental strand, 41822153 - 41822079
Alignment:
Q  609 tgagtttaaaattaagctcgttaaataaatgagttgaacttaaac--taaatatggttcgactcgtttggttcat 681  Q
    |||||| ||||||||| | ||||| |||||||| |||||||||||  || |||| |||||| |||||||||||||    
T  41822153 tgagttgaaaattaagtttgttaactaaatgagctgaacttaaactatatatatagttcgattcgtttggttcat 41822079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 609 - 683
Target Start/End: Original strand, 16742423 - 16742497
Alignment:
Q  609 tgagtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatga 683  Q
    |||||| ||||||||| |||||||||||||||| ||||||| |  |  |||| |||||| ||| |||||||||||    
T  16742423 tgagttgaaaattaagttcgttaaataaatgagctgaacttgagttgtatatagttcgattcgattggttcatga 16742497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 511 - 649
Target Start/End: Original strand, 48151126 - 48151264
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    |||||||  ||||||  ||||||||||||| |||| | ||| | |||||| || ||||   | |||||||||| ||||  |||| |||||   |||||||    
T  48151126 tagggcttgcaatgattcgaaccaactcgacaatagttcgaaactcgattcgacaattatcttgttgaacttggttcacaaaccaaatgagctgaacttg 48151225  T
Q  611 agtttaaaattaagctcgttaaataaatgagttgaactt 649  Q
    || | ||||||||| ||||||||||||| ||| ||||||    
T  48151226 agctgaaaattaagttcgttaaataaataagtcgaactt 48151264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 511 - 540
Target Start/End: Complemental strand, 49821099 - 49821070
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcga 540  Q
    ||||||||||||||||||||||||||||||    
T  49821099 tagggctgacaatgaaccgaaccaactcga 49821070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 159; Significance: 3e-84; HSPs: 53)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 159; E-Value: 3e-84
Query Start/End: Original strand, 511 - 693
Target Start/End: Original strand, 38061178 - 38061360
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    |||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||     
T  38061178 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgatttgataattgattcgttgaacttgatttatgaacctaatgagtcgaactta 38061277  T
Q  611 agtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatgaaccagcccga 693  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  38061278 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatgaaccagcccga 38061360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 511 - 689
Target Start/End: Complemental strand, 47983395 - 47983217
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    ||||| ||||||||||||||||||||||||||||| | |||||||||||| ||||||||||| |||||||||| |||| ||||| ||||| |||||||||    
T  47983395 tagggttgacaatgaaccgaaccaactcgaaaatagttcgagattcgattcgataattgatttgttgaacttggttcacgaaccaaatgagtcgaacttg 47983296  T
Q  611 agtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatgaaccagc 689  Q
    |||| |||  ||| |||||||||||||||||||||||||||  ||| ||||||||||||||||||||||||||||||||    
T  47983295 agttaaaatctaaactcgttaaataaatgagttgaacttaagttaagtatggttcgactcgtttggttcatgaaccagc 47983217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 511 - 689
Target Start/End: Complemental strand, 28006490 - 28006312
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    |||||| | |||||||||||||||||||||||||| | |||||||||||| ||||||||| |||||||||||| |||||||||| ||||| |||||||||    
T  28006490 tagggccggcaatgaaccgaaccaactcgaaaatagttcgagattcgattcgataattgactcgttgaacttggttcatgaaccaaatgagtcgaacttg 28006391  T
Q  611 agtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatgaaccagc 689  Q
    |||| ||||||||||||||||||||||||||| |||||| |  | | ||||||||||||||||| ||||||||||||||    
T  28006390 agttgaaaattaagctcgttaaataaatgagtcgaacttgagttgagtatggttcgactcgtttagttcatgaaccagc 28006312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 511 - 687
Target Start/End: Original strand, 29677519 - 29677695
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    |||||||| |||||||||||||||||||||||||| | ||| | ||||||||||||||| ||||||||||||| |||| ||||| ||||| |||||||||    
T  29677519 tagggctggcaatgaaccgaaccaactcgaaaatagttcgatactcgatttgataattggttcgttgaacttggttcacgaaccaaatgagtcgaacttg 29677618  T
Q  611 agtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatgaacca 687  Q
    |||| |||||||||||| ||||||||||||| ||||||| |||||| ||| |||||||||||||| |||||||||||    
T  29677619 agttgaaaattaagctctttaaataaatgagctgaacttgaactaagtatagttcgactcgtttgcttcatgaacca 29677695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 108; E-Value: 8e-54
Query Start/End: Original strand, 511 - 674
Target Start/End: Complemental strand, 7996111 - 7995948
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    ||||| ||||||||||||||||||||| ||||||| | |||||||||||| |||||||||||||||||||||| ||||| |||||||||| ||||||||     
T  7996111 tagggttgacaatgaaccgaaccaacttgaaaatagttcgagattcgattcgataattgattcgttgaacttggttcataaacctaatgagtcgaactta 7996012  T
Q  611 agtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgttt 674  Q
    ||||||||||||||||||||||||||||||| | ||||| || ||| |||||||||||||||||    
T  7996011 agtttaaaattaagctcgttaaataaatgagctcaacttgaattaagtatggttcgactcgttt 7995948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 520 - 689
Target Start/End: Original strand, 40159639 - 40159808
Alignment:
Q  520 caatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttgagtttaaaa 619  Q
    |||||||||||||||||||||||||| |  || |||||||| |||||||| ||| ||| ||||| |||||||| | ||||| ||||||||||||| ||||    
T  40159639 caatgaaccgaaccaactcgaaaatagtttgatattcgattcgataattggttcattggacttggttcatgaatcaaatgagtcgaacttgagttgaaaa 40159738  T
Q  620 ttaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatgaaccagc 689  Q
    ||||| |||||||||||||||||||||||| |||| | ||||||||||||||||||||||||||||||||    
T  40159739 ttaagttcgttaaataaatgagttgaacttgaacttagtatggttcgactcgtttggttcatgaaccagc 40159808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 521 - 689
Target Start/End: Original strand, 5204479 - 5204647
Alignment:
Q  521 aatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttgagtttaaaat 620  Q
    |||||| |||||||||||||||||| |  ||||||||||| ||||||||| |||||||||||| ||| |||||| ||||| ||||||||||||| |||||    
T  5204479 aatgaatcgaaccaactcgaaaatagtttgagattcgattcgataattgactcgttgaacttggttcgtgaaccaaatgagtcgaacttgagttgaaaat 5204578  T
Q  621 taagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatgaaccagc 689  Q
    |||| ||||||||||||||||| |||||| || | | ||||||||||||||||||||||||||||||||    
T  5204579 taagttcgttaaataaatgagtcgaacttgaattgagtatggttcgactcgtttggttcatgaaccagc 5204647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 511 - 689
Target Start/End: Original strand, 15257171 - 15257349
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    |||||||||||||||||||||||||||| |||||| |  || | |||||| |||||||| ||| ||| ||||| |||||||||| ||||| |||||||||    
T  15257171 tagggctgacaatgaaccgaaccaactcaaaaatagtttgatactcgattcgataattggttcattggacttggttcatgaaccaaatgagtcgaacttg 15257270  T
Q  611 agtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatgaaccagc 689  Q
    |||| ||||||||||||||||||||||||||||||| || |||| | |||| ||||||||||||||||||| |||||||    
T  15257271 agttgaaaattaagctcgttaaataaatgagttgaatttgaacttagtatgattcgactcgtttggttcatcaaccagc 15257349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 506 - 689
Target Start/End: Complemental strand, 50447486 - 50447303
Alignment:
Q  506 ctaactagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcga 605  Q
    |||| |||||||||||||||||| |||||||||||||||| | ||||| |||||| ||||||| ||||||| |||||| || ||||||| |||||  |||    
T  50447486 ctaaatagggctgacaatgaaccaaaccaactcgaaaatagttcgagactcgattcgataattaattcgttaaacttggtttatgaaccaaatgagccga 50447387  T
Q  606 acttgagtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatgaaccagc 689  Q
    ||||||  ||||||||||| |||||||||||||||||||||||| |||||  | ||  ||||||||||||||||||||||||||    
T  50447386 acttgaacttaaaattaagttcgttaaataaatgagttgaacttgaactatgtttgactcgactcgtttggttcatgaaccagc 50447303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 511 - 649
Target Start/End: Complemental strand, 24576049 - 24575911
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    ||||||||||||||||||||||||||||||||||| | ||||||| |||| ||||||||| |||||||||||| |||||||||| |||||| ||||||||    
T  24576049 tagggctgacaatgaaccgaaccaactcgaaaatagttcgagatttgattcgataattgactcgttgaacttggttcatgaaccaaatgaaacgaacttg 24575950  T
Q  611 agtttaaaattaagctcgttaaataaatgagttgaactt 649  Q
    |||| ||||||||||| ||||||||||||||| ||||||    
T  24575949 agttgaaaattaagcttgttaaataaatgagtcgaactt 24575911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 511 - 685
Target Start/End: Complemental strand, 7956464 - 7956290
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    ||||| || |||||||||||||||||||||||||| | ||| | || ||| |||||||| ||| ||| ||||| |||||||||  ||| | |||||||||    
T  7956464 tagggttggcaatgaaccgaaccaactcgaaaatagttcgatactcaattcgataattggttcattggacttggttcatgaacaaaattagtcgaacttg 7956365  T
Q  611 agtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatgaac 685  Q
    | || ||||||||||| |||||||||||||||||||||| |||| | |||| |||||||||||||||||||||||    
T  7956364 aattgaaaattaagcttgttaaataaatgagttgaacttgaacttagtatgattcgactcgtttggttcatgaac 7956290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 508 - 614
Target Start/End: Complemental strand, 6413382 - 6413276
Alignment:
Q  508 aactagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaac 607  Q
    ||||||||||| ||||||| |||||||||||||||||| | |||||||||||||||||||||||||||||||| || |||||||||| ||||||||||||    
T  6413382 aactagggctggcaatgaatcgaaccaactcgaaaatagttcgagattcgatttgataattgattcgttgaacctggttcatgaaccaaatgaatcgaac 6413283  T
Q  608 ttgagtt 614  Q
    |||||||    
T  6413282 ttgagtt 6413276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 511 - 681
Target Start/End: Original strand, 45581008 - 45581178
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    ||||||||||||||||||||||||||| ||||||| | ||| | |||||| |||||||   |||||||||||| |||||||||| ||||| | |||||||    
T  45581008 tagggctgacaatgaaccgaaccaacttgaaaatagttcgaaactcgattcgataattatctcgttgaacttggttcatgaaccaaatgagttgaacttg 45581107  T
Q  611 agtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcat 681  Q
    ||   ||||||||| || |||| |||||||| ||||| | | ||| |||||||||||||||||||||||||    
T  45581108 agcggaaaattaagttcattaactaaatgagatgaacattagctatatatggttcgactcgtttggttcat 45581178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 511 - 678
Target Start/End: Original strand, 48575080 - 48575247
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    |||||| | ||| ||||||||| |||||||||||| |  |||| || ||| | ||||| |||||||||||||| |||||||||| || ||||||||||||    
T  48575080 tagggccggcaaagaaccgaactaactcgaaaatagtatgagactcaattcggtaattaattcgttgaacttggttcatgaaccaaacgaatcgaacttg 48575179  T
Q  611 agtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggtt 678  Q
    | |||||||||||| |||| ||||||||||||||||||| |  ||| ||| ||||||| |||||||||    
T  48575180 aatttaaaattaagttcgtcaaataaatgagttgaacttgagttaagtatagttcgacccgtttggtt 48575247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 511 - 680
Target Start/End: Complemental strand, 35810858 - 35810689
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    |||||||| |||||||||||||||||||||  | | | ||  |||||||| || ||||||||||||||||||| |||||||||| |||||  ||||||||    
T  35810858 tagggctggcaatgaaccgaaccaactcgattaaagttcgtaattcgattcgacaattgattcgttgaacttggttcatgaaccaaatgagccgaacttg 35810759  T
Q  611 agtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttca 680  Q
    || | ||||||||| |||| |||||| ||||  |||||| ||||| || | |||||||||||||||||||    
T  35810758 agctgaaaattaagttcgtcaaataattgagccgaacttgaactatatgtagttcgactcgtttggttca 35810689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 511 - 683
Target Start/End: Original strand, 39802767 - 39802939
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    |||||||| ||||||| |||||||||||||||||| | ||||| ||| || |  | || ||||||||||| || |||||||||| ||||| |||||||||    
T  39802767 tagggctggcaatgaatcgaaccaactcgaaaatagttcgagactcggttcggcagttaattcgttgaacatggttcatgaaccaaatgagtcgaacttg 39802866  T
Q  611 agtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatga 683  Q
    |||| ||||||||| ||||||||||||||||  |||||| | |||  ||| | |||| |||||||||||||||    
T  39802867 agttgaaaattaagttcgttaaataaatgagccgaacttgagctatgtatagctcgattcgtttggttcatga 39802939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 511 - 683
Target Start/End: Original strand, 47602862 - 47603034
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    ||||||||||||||||||||||||||||||  ||| | ||| |||||| | |||| || || ||||||||||| ||||||||||||| ||   | |||||    
T  47602862 tagggctgacaatgaaccgaaccaactcgattatagttcgacattcgactcgatatttaatccgttgaacttggttcatgaacctaacgagctggacttg 47602961  T
Q  611 agtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatga 683  Q
    || | ||||||||| ||||||| |||||||| ||||||| | ||| |||| |||||||||||| |||||||||    
T  47602962 agctgaaaattaagttcgttaattaaatgagctgaacttgagctacatatagttcgactcgttaggttcatga 47603034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 501 - 687
Target Start/End: Original strand, 27076505 - 27076691
Alignment:
Q  501 atatcctaactagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatga 600  Q
    ||||||||||||||||||||||||||  ||||||||| ||||||| |   ||| | |||| ||||||| |||||||||||||| | |||||||  |||||    
T  27076505 atatcctaactagggctgacaatgaattgaaccaacttgaaaatagtttaagacttgattcgataattaattcgttgaacttggtccatgaactaaatga 27076604  T
Q  601 atcgaacttgagtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatgaacca 687  Q
      |||||||||| | ||| ||||| |||||||||||| ||||||||||| |||||  | ||  || | |||||||||||||||||||    
T  27076605 gccgaacttgagctcaaagttaagttcgttaaataaacgagttgaacttgaactatgtttgactcaattcgtttggttcatgaacca 27076691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 516 - 641
Target Start/End: Complemental strand, 31816703 - 31816578
Alignment:
Q  516 ctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttgagttt 615  Q
    |||||||||||||||||||||||||||||| | ||| | || ||| | |||||||||||||||||||| |||||||||| ||||| | |||||| |||      
T  31816703 ctgacaatgaaccgaaccaactcgaaaatagttcgaaactcaattcggtaattgattcgttgaacttggttcatgaaccaaatgagttgaacttcagtcg 31816604  T
Q  616 aaaattaagctcgttaaataaatgag 641  Q
    |||||||||||||| |||||||||||    
T  31816603 aaaattaagctcgtcaaataaatgag 31816578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 511 - 683
Target Start/End: Original strand, 24469817 - 24469989
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    |||||||| |||||||||||||||||||||  ||| | ||| |||||| | |||| || || ||||||||||| ||||||||||||| ||   | |||||    
T  24469817 tagggctggcaatgaaccgaaccaactcgattatagttcgacattcgactcgatatttaatccgttgaacttggttcatgaacctaacgagctggacttg 24469916  T
Q  611 agtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatga 683  Q
    || | ||||||||| ||||||| |||||||| ||||||| | ||| |||| |||||||||||| |||||||||    
T  24469917 agctgaaaattaagttcgttaattaaatgagctgaacttgagctacatatagttcgactcgttaggttcatga 24469989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 511 - 683
Target Start/End: Complemental strand, 32179998 - 32179826
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    |||||||| |||||||||||||||||||||  ||| | ||| |||||| | |||| || || ||||||||||| ||||| ||||||||||   | |||||    
T  32179998 tagggctggcaatgaaccgaaccaactcgattatagttcgacattcgactcgatatttaatccgttgaacttggttcataaacctaatgagctggacttg 32179899  T
Q  611 agtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatga 683  Q
    || | ||||||||| ||||||| |||||||| ||||||| | ||| |||| |||||||||||| |||||||||    
T  32179898 agctgaaaattaagttcgttaattaaatgagctgaacttgagctacatatagttcgactcgttcggttcatga 32179826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 511 - 680
Target Start/End: Original strand, 25124885 - 25125054
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    |||||||| |||||||||||||||||||||  | | | ||  ||||||||||||||||||||||||||||||| |||||||||| |||||  ||||||||    
T  25124885 tagggctggcaatgaaccgaaccaactcgattaaagttcgtaattcgatttgataattgattcgttgaacttggttcatgaaccaaatgagccgaacttg 25124984  T
Q  611 agtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttca 680  Q
    || | ||||||||  |||| || ||| |||| ||||||| | ||| || | ||||  |||||||||||||    
T  25124985 agctgaaaattaatttcgtgaactaattgagctgaacttgagctatatgtagttcagctcgtttggttca 25125054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 511 - 683
Target Start/End: Original strand, 7016075 - 7016247
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    ||||||||||||||||||||||||||||||| | ||| ||||| |||||| || |||||||| |||||||||| |||||||||| |||||   |||||||    
T  7016075 tagggctgacaatgaaccgaaccaactcgaacaaaattcgagactcgattcgacaattgatttgttgaacttggttcatgaaccaaatgagctgaacttg 7016174  T
Q  611 agtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatga 683  Q
    || | |||| |||| | |||||   ||| || ||| ||| | ||| ||| |||||||||||||||| ||||||    
T  7016175 agctcaaaactaagtttgttaacctaataagctgagcttgagctatatacggttcgactcgtttgggtcatga 7016247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 509 - 609
Target Start/End: Complemental strand, 7841764 - 7841665
Alignment:
Q  509 actagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaact 608  Q
    |||||||||| |||||||||||||||||||||||||| | ||||| |||||| ||||||| |||||||||||||| |||||||||| |||||| ||||||    
T  7841764 actagggctgtcaatgaaccgaaccaactcgaaaatatt-cgagactcgattcgataattaattcgttgaacttggttcatgaaccaaatgaaccgaact 7841666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 511 - 683
Target Start/End: Complemental strand, 36419241 - 36419069
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    |||||||| |||||||||||||||||||||  ||| | ||| |||||| | |||| || || ||| ||||||| ||||||||||||||||   | |||||    
T  36419241 tagggctggcaatgaaccgaaccaactcgattatagttcgacattcgactcgatatttaatccgtcgaacttggttcatgaacctaatgagctggacttg 36419142  T
Q  611 agtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatga 683  Q
    ||   ||||||||| ||||||| |||||||| ||||||| | ||| |||| |||||||||||| |||||||||    
T  36419141 agccgaaaattaagttcgttaattaaatgagctgaacttgagctacatatagttcgactcgttaggttcatga 36419069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 553 - 683
Target Start/End: Original strand, 42916156 - 42916286
Alignment:
Q  553 attcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttgagtttaaaattaagctcgttaaataaatgagttgaacttaaa 652  Q
    |||||||| |||||||||||||| ||||||| |||||||||| |||||  |||||||||| | ||||||||| ||| ||| ||| |||| ||||||| ||    
T  42916156 attcgattcgataattgattcgtcgaacttggttcatgaaccaaatgagccgaacttgagctgaaaattaagttcgctaactaattgagctgaacttgaa 42916255  T
Q  653 ctaaatatggttcgactcgtttggttcatga 683  Q
    | | |||| | ||||||||||||||||||||    
T  42916256 ccatatataggtcgactcgtttggttcatga 42916286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 553 - 683
Target Start/End: Original strand, 46264986 - 46265116
Alignment:
Q  553 attcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttgagtttaaaattaagctcgttaaataaatgagttgaacttaaa 652  Q
    |||||||| |||||||||||||| ||||||| |||||||||  |||||  |||||||||| | ||||||||| ||| ||| ||| |||| ||||||| ||    
T  46264986 attcgattcgataattgattcgtcgaacttggttcatgaactaaatgagccgaacttgagctgaaaattaagttcgctaactaattgagctgaacttgaa 46265085  T
Q  653 ctaaatatggttcgactcgtttggttcatga 683  Q
    ||| |||| | ||||||||||||||||||||    
T  46265086 ctatatataggtcgactcgtttggttcatga 46265116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 520 - 681
Target Start/End: Complemental strand, 20349277 - 20349116
Alignment:
Q  520 caatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttgagtttaaaa 619  Q
    |||||||||||||||||||||| ||| |   | ||| || | ||||||| ||||||||||||||||||||  ||| |||||  ||||||| || | ||||    
T  20349277 caatgaaccgaaccaactcgaacatagtttaaaatttgactcgataattaattcgttgaacttgattcatataccaaatgagccgaacttcagatgaaaa 20349178  T
Q  620 ttaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcat 681  Q
    ||||| ||||||| |||||||| |||| || ||||| ||||  |||||||||||||||||||    
T  20349177 ttaagttcgttaattaaatgagctgaatttgaactatatataattcgactcgtttggttcat 20349116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 511 - 683
Target Start/End: Complemental strand, 15306633 - 15306461
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    |||||||| |||||||||||||||||| || |||| | ||  | |||||| ||||||| |||| ||||||||| |||||||||| |||||   |||||||    
T  15306633 tagggctggcaatgaaccgaaccaacttgacaatagttcggaactcgattcgataattaattcattgaacttggttcatgaaccaaatgagctgaacttg 15306534  T
Q  611 agtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatga 683  Q
    ||   ||||||||| || |||||||||||||  |||||| | ||  |||| |||||||||| |||||||||||    
T  15306533 agcggaaaattaagttcattaaataaatgagccgaacttgagctgtatatagttcgactcgattggttcatga 15306461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 520 - 683
Target Start/End: Complemental strand, 7596524 - 7596361
Alignment:
Q  520 caatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttgagtttaaaa 619  Q
    |||||||||||||||||||||  | | | ||  ||| |||| |||||||||||||| ||||||| || ||||||| |||||  |||||||||| | ||||    
T  7596524 caatgaaccgaaccaactcgattagagttcgtaatttgattcgataattgattcgtcgaacttggtttatgaaccaaatgagccgaacttgagctgaaaa 7596425  T
Q  620 ttaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatga 683  Q
    ||||| ||| ||| ||| |||| ||||||| ||||| || | |||||||||||||| |||||||    
T  7596424 ttaagttcgctaactaattgagctgaacttgaactatatgtagttcgactcgtttgattcatga 7596361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 511 - 624
Target Start/End: Complemental strand, 15014455 - 15014342
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    ||||| || |||||||||||||||||||||  | | | ||  |||||||| |||||||||||||| |||||||||||||||||| |||||  ||||||||    
T  15014455 tagggttggcaatgaaccgaaccaactcgattagagttcgtaattcgattcgataattgattcgtcgaacttgattcatgaaccaaatgagccgaacttg 15014356  T
Q  611 agtttaaaattaag 624  Q
    |||| |||||||||    
T  15014355 agttgaaaattaag 15014342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 512 - 681
Target Start/End: Original strand, 45653433 - 45653601
Alignment:
Q  512 agggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttga 611  Q
    |||||| |||||||||||| |||||||||||||| | | | | |||||| || ||||  ||||||||||||| |||||||||| |||||  |||||||||    
T  45653433 agggctaacaatgaaccga-ccaactcgaaaatagttcaaaactcgattcgacaattatttcgttgaacttggttcatgaaccaaatgagccgaacttga 45653531  T
Q  612 gtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcat 681  Q
    | | ||| ||||| ||||||  |||||||  ||||| | ||||| |||| |||||||||||||| |||||    
T  45653532 gctaaaagttaagttcgttagctaaatgaactgaacatgaactatatatagttcgactcgtttgattcat 45653601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 511 - 683
Target Start/End: Complemental strand, 36119211 - 36119040
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    |||||||||||||||||||||||||||  |||||| | ||| |||||||| || ||||   |||| ||||||| || ||||||| ||||||  |||||||    
T  36119211 tagggctgacaatgaaccgaaccaactaaaaaatagttcgaaattcgattcgacaattttctcgtcgaacttggtttatgaaccaaatgaactgaacttg 36119112  T
Q  611 agtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatga 683  Q
    || || |||| ||| | ||||| |||| ||| ||||||| ||||| ||||  ||||| |||||||||||||||    
T  36119111 ag-ttcaaatgaagtttgttaactaaacgagctgaacttgaactatatataattcgattcgtttggttcatga 36119040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 511 - 612
Target Start/End: Original strand, 12224575 - 12224676
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    |||||||||||||||||||||||||||||| |||| | ||  |||||||| || |||| | |||||||||||| |||||||||| |||||  ||||||||    
T  12224575 tagggctgacaatgaaccgaaccaactcgacaatagttcggaattcgattcgacaattaactcgttgaacttggttcatgaaccaaatgagccgaacttg 12224674  T
Q  611 ag 612  Q
    ||    
T  12224675 ag 12224676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 511 - 680
Target Start/End: Complemental strand, 42937214 - 42937045
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    |||||||| |||||||| ||||||||||||  | | | ||  ||||||||  | ||||||||||| ||||||| |||||||| | |||||  ||||||||    
T  42937214 tagggctggcaatgaactgaaccaactcgattagagttcgtaattcgattcaacaattgattcgtcgaacttggttcatgaatcaaatgagccgaacttg 42937115  T
Q  611 agtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttca 680  Q
    || ||||||||||| |||| || ||| |||| ||||||| | |||  ||| |||| ||||||||||||||    
T  42937114 agcttaaaattaagttcgtcaactaattgagctgaacttgagctatgtatagttcaactcgtttggttca 42937045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 511 - 651
Target Start/End: Complemental strand, 7702975 - 7702835
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    |||||||| |||||||||||||||||||||  ||| | ||| |||||| | |||| || || ||||||||||| |||||||| |||| ||   | |||||    
T  7702975 tagggctggcaatgaaccgaaccaactcgattatagttcgacattcgactcgatatttaatccgttgaacttggttcatgaagctaacgagctggacttg 7702876  T
Q  611 agtttaaaattaagctcgttaaataaatgagttgaacttaa 651  Q
    || | ||||||||| ||||||| |||||||| |||||||||    
T  7702875 agctgaaaattaagttcgttaattaaatgagctgaacttaa 7702835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 509 - 685
Target Start/End: Original strand, 21680654 - 21680830
Alignment:
Q  509 actagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaact 608  Q
    ||||||| || ||||||||||||||| |||||||||| | ||| | |||||| |||||||   |||||||||||| || |||||   |||||  ||||||    
T  21680654 actagggttggcaatgaaccgaaccagctcgaaaatagttcgaaactcgattcgataattatctcgttgaacttggtttatgaatgaaatgagccgaact 21680753  T
Q  609 tgagtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatgaac 685  Q
    |||| | ||||||||| ||||||  |||| ||  ||||| ||||||| |||| |||| ||| |||| ||||||||||    
T  21680754 tgagctaaaaattaagttcgttagctaaacgaactgaacataaactacatatagttcaacttgtttagttcatgaac 21680830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 511 - 683
Target Start/End: Complemental strand, 31869734 - 31869562
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    |||||| ||||||||||||||| || |||| |||| | ||  | | |||| || |||| | |||||||||||| |||||||||| |||||  |||||||     
T  31869734 tagggccgacaatgaaccgaactaattcgacaatagttcggaacttgattcgacaattaaatcgttgaacttggttcatgaaccaaatgagccgaactta 31869635  T
Q  611 agtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatga 683  Q
    || | ||||||||| ||||||||||||||||  |||||| | ||  ||||  ||||||||| |||||||||||    
T  31869634 agctgaaaattaagttcgttaaataaatgagccgaacttgagctgtatataattcgactcggttggttcatga 31869562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 511 - 629
Target Start/End: Original strand, 14578585 - 14578703
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    ||||||||||||||||||||||||||||||  | | | ||  |||||||| || |||||||| |||||||||| |||||||||| |||||  |||||| |    
T  14578585 tagggctgacaatgaaccgaaccaactcgattagagttcgtaattcgattagacaattgatttgttgaacttggttcatgaaccaaatgagccgaactgg 14578684  T
Q  611 agtttaaaattaagctcgt 629  Q
    || | ||||||||| ||||    
T  14578685 agctgaaaattaagttcgt 14578703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 510 - 680
Target Start/End: Complemental strand, 23916951 - 23916781
Alignment:
Q  510 ctagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaactt 609  Q
    ||||||||||||||||||| |||||||||||  | | | ||  |||||||| |||||||||||| |  |||||| ||||| |||| |||||  | |||||    
T  23916951 ctagggctgacaatgaaccaaaccaactcgattaaagttcgtaattcgattcgataattgattcatcaaacttggttcattaaccaaatgagcctaactt 23916852  T
Q  610 gagtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttca 680  Q
    ||| | ||||||||| |||| || ||| |||| ||||||| | | | || | |||||||||||||||||||    
T  23916851 gagctgaaaattaagttcgtcaactaattgagctgaacttgagcaatatgtagttcgactcgtttggttca 23916781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 510 - 683
Target Start/End: Original strand, 37441185 - 37441358
Alignment:
Q  510 ctagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaactt 609  Q
    ||||||||| |||||||||||| ||||| ||  ||| | ||| |||| | | ||||  | || ||||||||||| ||||||||||||| ||   | ||||    
T  37441185 ctagggctggcaatgaaccgaatcaactagattatagttcgacattcaactcgatatctaatccgttgaacttggttcatgaacctaacgagctggactt 37441284  T
Q  610 gagtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatga 683  Q
    ||| | ||||||||| ||||||| |||||||| ||||||| | ||| |||| |||||||||||| |||| ||||    
T  37441285 gagctgaaaattaagttcgttaattaaatgagctgaacttgagctacatatagttcgactcgttaggttaatga 37441358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 511 - 644
Target Start/End: Complemental strand, 44596657 - 44596524
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    |||||||| ||||||||||||||||||||| |||| |  |  | |||||| || |||| | |||||||| ||| |||||||||| |||||   |||||||    
T  44596657 tagggctggcaatgaaccgaaccaactcgacaatagtttggaactcgattcgacaattaactcgttgaatttggttcatgaaccaaatgagctgaacttg 44596558  T
Q  611 agtttaaaattaagctcgttaaataaatgagttg 644  Q
    |  | ||||||||| |||||||||||||||||||    
T  44596557 aactgaaaattaagttcgttaaataaatgagttg 44596524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 562 - 670
Target Start/End: Complemental strand, 14796677 - 14796569
Alignment:
Q  562 gataattgattcgttgaacttgattcatgaacctaatgaatcgaacttgagtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatg 661  Q
    ||||||| ||||||||||| || |||||||||| | | | | ||||||||  || |||||||| ||||||||||||||||||||||||  |||| ||||     
T  14796677 gataattaattcgttgaacgtggttcatgaaccaattaagttgaacttgaactttaaattaagttcgttaaataaatgagttgaactttgactatatata 14796578  T
Q  662 gttcgactc 670  Q
    |||||||||    
T  14796577 gttcgactc 14796569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 562 - 670
Target Start/End: Complemental strand, 14805551 - 14805443
Alignment:
Q  562 gataattgattcgttgaacttgattcatgaacctaatgaatcgaacttgagtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatg 661  Q
    ||||||| ||||||||||| || |||||||||| | | | | ||||||||  || |||||||| ||||||||||||||||||||||||  |||| ||||     
T  14805551 gataattaattcgttgaacgtggttcatgaaccaattaagttgaacttgaactttaaattaagttcgttaaataaatgagttgaactttgactatatata 14805452  T
Q  662 gttcgactc 670  Q
    |||||||||    
T  14805451 gttcgactc 14805443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 571 - 685
Target Start/End: Complemental strand, 19508608 - 19508494
Alignment:
Q  571 ttcgttgaacttgattcatgaacctaatgaatcgaacttgagtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactc 670  Q
    ||||||||||||| |||||||||| || ||  |||||||||| | || |||||| ||||||| |||||||||||| ||| |  || |||| ||||||||     
T  19508608 ttcgttgaacttggttcatgaaccaaacgagccgaacttgagctaaagattaagttcgttaactaaatgagttgaccttgagttatatatagttcgactt 19508509  T
Q  671 gtttggttcatgaac 685  Q
    |||||||||| ||||    
T  19508508 gtttggttcacgaac 19508494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 514 - 683
Target Start/End: Complemental strand, 15663086 - 15662917
Alignment:
Q  514 ggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttgagt 613  Q
    ||||||||||||||||||||||||| |  | | |  |  |||| |||  ||||||||||||| ||||||| |||||| ||| |||||  ||||||||||     
T  15663086 ggctgacaatgaaccgaaccaactcaattagagtttgtaattcaattcaataattgattcgtcgaacttggttcatgtaccaaatgagccgaacttgagc 15662987  T
Q  614 ttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatga 683  Q
    | ||||||||| |||| || ||| |||   |||||||| ||| || | ||||||||| ||||||||||||    
T  15662986 tgaaaattaagttcgtcaactaattgaaccgaacttaagctatatgtagttcgactcttttggttcatga 15662917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 572 - 683
Target Start/End: Original strand, 23915658 - 23915769
Alignment:
Q  572 tcgttgaacttgattcatgaacctaatgaatcgaacttgagtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcg 671  Q
    |||||||||||| |||||||||| |||||   |||||| || | ||||||||| || ||||||||||||||||||||| |  |  |||| ||||||||||    
T  23915658 tcgttgaacttggttcatgaaccaaatgagctgaactttagctgaaaattaagttcattaaataaatgagttgaacttgagttgtatatagttcgactcg 23915757  T
Q  672 tttggttcatga 683  Q
     |||||| ||||    
T  23915758 attggttaatga 23915769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 574 - 685
Target Start/End: Original strand, 43087529 - 43087640
Alignment:
Q  574 gttgaacttgattcatgaacctaatgaatcgaacttgagtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtt 673  Q
    |||||||||| |||||||||| || ||  |||||||||  | || |||||| ||||||| |||||||||||||||| |  || |||| |||||| |||||    
T  43087529 gttgaacttggttcatgaaccaaacgagccgaacttgaactaaagattaagttcgttaattaaatgagttgaacttgagttatatatagttcgattcgtt 43087628  T
Q  674 tggttcatgaac 685  Q
    ||||||| ||||    
T  43087629 tggttcacgaac 43087640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 520 - 681
Target Start/End: Complemental strand, 20347797 - 20347638
Alignment:
Q  520 caatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttgagtttaaaa 619  Q
    |||||||||||| ||||||||| ||| |   | ||| || | || |||| |||||||||| |||||||||| ||| |||||  ||||||| || | ||||    
T  20347797 caatgaaccgaatcaactcgaatatagtttaaaatttgactcgacaattaattcgttgaatttgattcatgtaccaaatgagccgaacttaagatgaaaa 20347698  T
Q  620 ttaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcat 681  Q
    ||||| ||||||| |||||||| |||| ||  |||| |||   |||||||||||||||||||    
T  20347697 ttaagttcgttaattaaatgagctgaatttgtactatataa--ttcgactcgtttggttcat 20347638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 578 - 685
Target Start/End: Original strand, 13645247 - 13645354
Alignment:
Q  578 aacttgattcatgaacctaatgaatcgaacttgagtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggt 677  Q
    |||||| |||||||| | || ||  |||||||||| | || |||||| ||||||| ||||||||||||| || |  || |||| ||||||||| ||||||    
T  13645247 aacttggttcatgaatcaaacgagccgaacttgagctaaagattaagttcgttaagtaaatgagttgaatttgagttatatatagttcgactcatttggt 13645346  T
Q  678 tcatgaac 685  Q
    ||||||||    
T  13645347 tcatgaac 13645354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 585 - 680
Target Start/End: Complemental strand, 40002960 - 40002865
Alignment:
Q  585 ttcatgaacctaatgaatcgaacttgagtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttca 680  Q
    |||||||| | |||||  |||||||||||| ||||||||| |||| || ||| |||||||||||| | ||| || | |||||||||||||| ||||    
T  40002960 ttcatgaatcaaatgagccgaacttgagttgaaaattaagttcgtcaactaattgagttgaacttgagctatatgtagttcgactcgtttgattca 40002865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 588 - 685
Target Start/End: Original strand, 8828303 - 8828400
Alignment:
Q  588 atgaacctaatgaatcgaacttgagtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatgaac 685  Q
    ||||||| ||||||| ||||||||| | |||||||||   ||||| ||||| |||||||||| | ||| | ||  ||||||||||||| |||||||||    
T  8828303 atgaaccaaatgaattgaacttgagctgaaaattaagtctgttaactaaataagttgaacttgagctagacataattcgactcgtttgattcatgaac 8828400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 512 - 580
Target Start/End: Complemental strand, 9381824 - 9381756
Alignment:
Q  512 agggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaac 580  Q
    |||| ||||||||||||||||||||||||||||| | |||||| ||| | | |||||  ||||||||||    
T  9381824 agggttgacaatgaaccgaaccaactcgaaaatatttcgagatccgaatcggtaattagttcgttgaac 9381756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 155; Significance: 7e-82; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 155; E-Value: 7e-82
Query Start/End: Original strand, 511 - 693
Target Start/End: Complemental strand, 26298451 - 26298269
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    |||||||| ||||||||||||||||||| |||||| || ||||||||||| ||||||||||||||||||||||||||||||||||||||| || ||||||    
T  26298451 tagggctggcaatgaaccgaaccaactcaaaaatagtgtgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcaaacttg 26298352  T
Q  611 agtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatgaaccagcccga 693  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26298351 agtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatgaaccagcccga 26298269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 155; E-Value: 7e-82
Query Start/End: Original strand, 511 - 693
Target Start/End: Original strand, 27450581 - 27450763
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    |||||||| |||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| |||||||||||||||||||| |||||||||    
T  27450581 tagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaatttgattcatgaacctaatgagtcgaacttg 27450680  T
Q  611 agtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatgaaccagcccga 693  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  27450681 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatgtggttcgactcgtttggttcatgaaccagcccga 27450763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 152; E-Value: 4e-80
Query Start/End: Original strand, 510 - 693
Target Start/End: Complemental strand, 39407547 - 39407364
Alignment:
Q  510 ctagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaactt 609  Q
    |||||||||  |||||||||||||||||| |||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  39407547 ctagggctggtaatgaaccgaaccaactcaaaaatagtgcgagattcgattcgataattgattcgttgaacttgattcatgaacctaatgagtcgaactt 39407448  T
Q  610 gagtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatgaaccagcccga 693  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||    
T  39407447 gagtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatgaaccagtccga 39407364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 147; E-Value: 4e-77
Query Start/End: Original strand, 511 - 693
Target Start/End: Original strand, 34719657 - 34719839
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    |||||||| ||||||| |||||||||||||||||| ||||||||| |||| |||||||||||||||||||||||||||||||| |||||| |||||||||    
T  34719657 tagggctggcaatgaaacgaaccaactcgaaaatagtgcgagatttgattcgataattgattcgttgaacttgattcatgaacttaatgagtcgaacttg 34719756  T
Q  611 agtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatgaaccagcccga 693  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||    
T  34719757 agtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatgaaccagtccga 34719839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 143; E-Value: 1e-74
Query Start/End: Original strand, 511 - 693
Target Start/End: Complemental strand, 34857487 - 34857305
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    ||||| || |||||||||||||||||||||||||| || ||||||| |||  |||||||||||||||||||||||||||||| ||||||| |||||||||    
T  34857487 tagggttggcaatgaaccgaaccaactcgaaaatagtgtgagattcaattcaataattgattcgttgaacttgattcatgaatctaatgagtcgaacttg 34857388  T
Q  611 agtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatgaaccagcccga 693  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  34857387 agtttaaaattaagctcgttaaataaatgagttaaacttaaactaaatatggttcgactcgtttggttcatgaaccagcccga 34857305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 141; E-Value: 2e-73
Query Start/End: Original strand, 521 - 693
Target Start/End: Complemental strand, 26299977 - 26299805
Alignment:
Q  521 aatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttgagtttaaaat 620  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| ||||||||||||||||| || ||||||||||||||||    
T  26299977 aatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattcgttgaacttcattcatgaacctaatgagtcaaacttgagtttaaaat 26299878  T
Q  621 taagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatgaaccagcccga 693  Q
    |||||||||||||||||||| |||||||| ||||||||||||||||||||||||| |||||||||||||||||    
T  26299877 taagctcgttaaataaatgaattgaacttgaactaaatatggttcgactcgtttgattcatgaaccagcccga 26299805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 510 - 691
Target Start/End: Complemental strand, 19716319 - 19716143
Alignment:
Q  510 ctagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaactt 609  Q
    ||||||||| |||||||||||||||||||||||||| |||||||||||||     |||||||||||||||||||||||||||||||||||| ||||||||    
T  19716319 ctagggctggcaatgaaccgaaccaactcgaaaatagtgcgagattcgat-----aattgattcgttgaacttgattcatgaacctaatgagtcgaactt 19716225  T
Q  610 gagtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatgaaccagccc 691  Q
     |||||||||||||||||||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||||    
T  19716224 aagtttaaaattaagctcgttaaataaatgaattgaacttgaactaaatatggtttgactcgtttggttcatgaaccagccc 19716143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 521 - 693
Target Start/End: Original strand, 34723670 - 34723835
Alignment:
Q  521 aatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttgagtttaaaat 620  Q
    |||||| |||||||||||||||||| || ||||||       |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  34723670 aatgaaacgaaccaactcgaaaatagtgtgagatt-------ataattgattcgttgaacttgattcatgaacctaatgagtcgaatttgagtttaaaat 34723762  T
Q  621 taagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatgaaccagcccga 693  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||    
T  34723763 taagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatgaaccagtccga 34723835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 511 - 690
Target Start/End: Original strand, 34724754 - 34724921
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    |||||| | |||||||||||||||||| ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  34724754 tagggccggcaatgaaccgaaccaacttgaaaatagtgtgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgagtcgaacttg 34724853  T
Q  611 agtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatgaaccagcc 690  Q
    |||||||||||||||||||||||||||||||||||||            |||||||||||||||||||||||||||||||    
T  34724854 agtttaaaattaagctcgttaaataaatgagttgaac------------tggttcgactcgtttggttcatgaaccagcc 34724921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 511 - 689
Target Start/End: Complemental strand, 27196217 - 27196039
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    ||||||||||||||||||||||||||||||||||| | ||||| |||||| ||||||||||||||| || ||| |||||||||| ||||| |||||||||    
T  27196217 tagggctgacaatgaaccgaaccaactcgaaaatagttcgagactcgattcgataattgattcgttaaatttggttcatgaaccaaatgagtcgaacttg 27196118  T
Q  611 agtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatgaaccagc 689  Q
    |||| |||||||||||||||| ||||| ||||||||||| | |||| |||| |||||||||| ||||||||||||||||    
T  27196117 agttgaaaattaagctcgttagataaaggagttgaacttgagctaagtatgattcgactcgtctggttcatgaaccagc 27196039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 108; E-Value: 8e-54
Query Start/End: Original strand, 510 - 688
Target Start/End: Complemental strand, 39409267 - 39409103
Alignment:
Q  510 ctagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaactt 609  Q
    |||||||||  ||||||||||||||||||||||||| |||||||||||||| ||||||||||||              ||||||||||||| ||||||||    
T  39409267 ctagggctggtaatgaaccgaaccaactcgaaaatagtgcgagattcgattcgataattgattc--------------atgaacctaatgagtcgaactt 39409182  T
Q  610 gagtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatgaaccag 688  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  39409181 gagtttaaaattaagctcgttaaataaatgagttgaacttgaactaaatatggttcgactcgtttggttcatgaaccag 39409103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 508 - 687
Target Start/End: Complemental strand, 10494128 - 10493949
Alignment:
Q  508 aactagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaac 607  Q
    ||||||||||| ||||||||||||||||||| |||||| |  || ||||||||  ||||||| ||||||||||||| ||||  |||| ||||| ||||||    
T  10494128 aactagggctggcaatgaaccgaaccaactcaaaaatagtttgatattcgattcaataattggttcgttgaacttggttcacaaaccaaatgagtcgaac 10494029  T
Q  608 ttgagtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatgaacca 687  Q
    ||||||| |||||||||||||||||||||||||| ||||||| |||||| ||| ||||||||||||||||||||||||||    
T  10494028 ttgagttgaaaattaagctcgttaaataaatgagctgaacttgaactaagtatagttcgactcgtttggttcatgaacca 10493949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 511 - 641
Target Start/End: Original strand, 32945021 - 32945151
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    ||||||||||||||||||||||||||||||||||| | ||| | |||||| | ||||||||||||| |||||| |||||||||| ||||| |||||||||    
T  32945021 tagggctgacaatgaaccgaaccaactcgaaaatagttcgaaactcgattcggtaattgattcgttaaacttggttcatgaaccaaatgagtcgaacttg 32945120  T
Q  611 agtttaaaattaagctcgttaaataaatgag 641  Q
    |||  |||||||||||||| |||||||||||    
T  32945121 agtcaaaaattaagctcgtcaaataaatgag 32945151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 511 - 683
Target Start/End: Original strand, 3801364 - 3801536
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    |||||||| |||||||||||||||||||||| ||| | ||  |||||| | || ||||| ||| ||||||||| |||||||||| |||||  ||||||||    
T  3801364 tagggctggcaatgaaccgaaccaactcgaatatagttcgtaattcgactcgacaattggttcattgaacttggttcatgaaccaaatgagccgaacttg 3801463  T
Q  611 agtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatga 683  Q
    || | ||||||||| ||||||| |||||||||||||||| ||||| | ||||||||| ||||| |||||||||    
T  3801464 agctgaaaattaagttcgttaattaaatgagttgaacttgaactataaatggttcgattcgttaggttcatga 3801536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 511 - 683
Target Start/End: Complemental strand, 10328070 - 10327898
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    ||||||||||||||||||||||||||||||||||  | | | | |||||| | ||||||||||||||||||||||||||||||| |||||||| ||||||    
T  10328070 tagggctgacaatgaaccgaaccaactcgaaaattgttcaaaactcgattcggtaattgattcgttgaacttgattcatgaaccaaatgaatcaaacttg 10327971  T
Q  611 agtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatga 683  Q
    |||  || ||||| ||||  |||||||||| || ||||| | |||  ||| ||||||||||||| ||||||||    
T  10327970 agtcgaatattaaactcgacaaataaatgaattaaacttgagctatgtatagttcgactcgttttgttcatga 10327898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 525 - 683
Target Start/End: Complemental strand, 3457956 - 3457794
Alignment:
Q  525 aaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttgagt----ttaaaat 620  Q
    ||||||||||||||||||||| |  ||||||||||||| |||||  ||||||||||| ||||| |||||| ||||||||||||||||||    | |||||    
T  3457956 aaccgaaccaactcgaaaatagtttgagattcgatttggtaattagttcgttgaactcgattcttgaaccaaatgaatcgaacttgagttaaataaaaat 3457857  T
Q  621 taagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatga 683  Q
    |||| ||||||||||||||||||| |||| | ||| |||| ||  ||||||||||||||||||    
T  3457856 taagttcgttaaataaatgagttggacttgagctatatatagtctgactcgtttggttcatga 3457794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 511 - 683
Target Start/End: Original strand, 38522861 - 38523033
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    |||||||| |||||||||||||||||||||| ||| | ||  ||| || | |||||||| | | ||||||||| |||||||||| |||||  | ||||||    
T  38522861 tagggctggcaatgaaccgaaccaactcgaatatagttcgtaatttgactcgataattggtccattgaacttggttcatgaaccaaatgagccaaacttg 38522960  T
Q  611 agtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatga 683  Q
    || | ||||||||| ||||||| |||||||| ||||||| ||||| | ||||||||| ||||| |||||||||    
T  38522961 agctgaaaattaagttcgttaattaaatgagctgaacttgaactatagatggttcgattcgttgggttcatga 38523033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 553 - 683
Target Start/End: Complemental strand, 1225449 - 1225319
Alignment:
Q  553 attcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttgagtttaaaattaagctcgttaaataaatgagttgaacttaaa 652  Q
    |||||||| |||||||| ||||||||||||  || ||||||| ||||| ||||||||||||| |||||||||||||| ||||||||||   |||||| ||    
T  1225449 attcgattcgataattgtttcgttgaacttagtttatgaaccaaatgagtcgaacttgagttgaaaattaagctcgtcaaataaatgaaccgaacttgaa 1225350  T
Q  653 ctaaatatggttcgactcgtttggttcatga 683  Q
    |||  |||  |||||||||||||||||||||    
T  1225349 ctacgtataattcgactcgtttggttcatga 1225319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 584 - 689
Target Start/End: Complemental strand, 28246799 - 28246693
Alignment:
Q  584 attcatgaacctaatgaatcgaacttgagtttaaaattaagctcgttaaataaatgagttgaacttaaac-taaatatggttcgactcgtttggttcatg 682  Q
    ||||| ||||| ||||| ||||||||||||| |||||||| ||| ||||||||||||||||||||| ||| ||| |||| ||||||||||||||||||||    
T  28246799 attcacgaaccaaatgagtcgaacttgagttgaaaattaaactcattaaataaatgagttgaacttgaacttaagtatgattcgactcgtttggttcatg 28246700  T
Q  683 aaccagc 689  Q
    |||||||    
T  28246699 aaccagc 28246693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 511 - 683
Target Start/End: Complemental strand, 15933303 - 15933128
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    |||||||| |||||||||||||||||||||  ||| | ||| |||||| | || | || |||||||||||||| |||||||||||||||| | |||| ||    
T  15933303 tagggctggcaatgaaccgaaccaactcgagtatagttcgaaattcgactcgacagttaattcgttgaacttggttcatgaacctaatgagttgaacatg 15933204  T
Q  611 agtt---taaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatga 683  Q
    || |   ||  |||||| ||||||||||||||||  |||||| | ||| | |||||||||||||||||||||||||    
T  15933203 agctaaatactattaagttcgttaaataaatgagccgaacttgagctatagatggttcgactcgtttggttcatga 15933128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 511 - 622
Target Start/End: Original strand, 5382825 - 5382936
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    ||||||||||||||||| ||||||||| ||||| | | ||||| |||||| | ||||| ||||||||||||||||||||||||| || || |||||| ||    
T  5382825 tagggctgacaatgaactgaaccaacttgaaaagagttcgagactcgattcggtaattaattcgttgaacttgattcatgaaccaaacgagtcgaacctg 5382924  T
Q  611 agtttaaaatta 622  Q
    ||||||||||||    
T  5382925 agtttaaaatta 5382936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 511 - 680
Target Start/End: Complemental strand, 20189113 - 20188944
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    ||||||||||||||||||||| ||||||||  | | | ||  ||| |||| |||||||||||||| ||||||| |||||||||| |||||  ||||||||    
T  20189113 tagggctgacaatgaaccgaatcaactcgattagagttcgtaatttgattcgataattgattcgtcgaacttggttcatgaaccaaatgagccgaacttg 20189014  T
Q  611 agtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttca 680  Q
    |  | ||||||||| |||| || ||| |||| ||||||| | ||| || | |||||||||||||||||||    
T  20189013 aactaaaaattaagttcgtcaactaattgagctgaacttgagctatatgtagttcgactcgtttggttca 20188944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 511 - 689
Target Start/End: Complemental strand, 36523895 - 36523713
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    ||||| |||||||||||||||  |||||||| | | | ||||| | |||| |||||| ||||| ||||||||| |||||||||| ||||| |||||||||    
T  36523895 tagggatgacaatgaaccgaattaactcgaataaagtccgagacttgattcgataatagattcattgaacttggttcatgaaccaaatgagtcgaacttg 36523796  T
Q  611 agtttaaaattaag----ctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatgaaccagc 689  Q
    | || |||||||||     | |||||||||||||| ||||||| | |||  ||| ||| || |||||||||||||||||||||    
T  36523795 atttaaaaattaagttaatttgttaaataaatgagctgaacttgagctatgtatagtttgattcgtttggttcatgaaccagc 36523713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 511 - 588
Target Start/End: Complemental strand, 28247550 - 28247473
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattca 588  Q
    ||||||||||||||||||||||||| ||||||||| | ||| ||| ||||||||||||||||||||||||||| ||||    
T  28247550 tagggctgacaatgaaccgaaccaattcgaaaatagttcgatatttgatttgataattgattcgttgaacttggttca 28247473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 511 - 683
Target Start/End: Complemental strand, 27906238 - 27906066
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    |||||||| |||||||||||||||||||||  ||| | ||| |||||| | ||||  | || ||||||||||| ||||||||||||| ||   | |||||    
T  27906238 tagggctggcaatgaaccgaaccaactcgattatagttcgacattcgactcgatatctaatccgttgaacttggttcatgaacctaacgagctggacttg 27906139  T
Q  611 agtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatga 683  Q
    || | ||||||||| ||||||| |||||||| ||||||| | ||| |||| |||||||| ||| || ||||||    
T  27906138 agctgaaaattaagttcgttaattaaatgagctgaacttgagctacatatagttcgacttgttaggctcatga 27906066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 511 - 683
Target Start/End: Complemental strand, 31621008 - 31620836
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    ||||||||||||||||||||||||||| ||| ||| | ||| |||||| | || ||||  | | ||||| ||| |||||||||||||||| | ||||||     
T  31621008 tagggctgacaatgaaccgaaccaacttgaatatagttcgaaattcgactcgacaattagtccattgaatttggttcatgaacctaatgagttgaacttc 31620909  T
Q  611 agtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatga 683  Q
    || | || |||||| ||||||| |||||||| ||||||| |  || ||||  |||||||||||||||| ||||    
T  31620908 agctgaatattaagttcgttaattaaatgagctgaacttgagttacatataattcgactcgtttggttaatga 31620836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 510 - 685
Target Start/End: Complemental strand, 41783466 - 41783291
Alignment:
Q  510 ctagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaactt 609  Q
    |||||||||||||||||||||  ||||||||| | | | ||  | |||| | | |||||  ||||||||||||| |||||||||| |||||  |||||||    
T  41783466 ctagggctgacaatgaaccgatacaactcgaataaagttcggaactcgactcggtaattagttcgttgaacttggttcatgaaccaaatgagccgaactt 41783367  T
Q  610 gagtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatgaac 685  Q
    ||| | || |||||| ||||||| |||||||||||||||| |  || || | ||||||| ||||||||||| ||||    
T  41783366 gagctaaagattaagttcgttaactaaatgagttgaacttgagttatatgtagttcgacccgtttggttcacgaac 41783291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 515 - 683
Target Start/End: Complemental strand, 18880328 - 18880160
Alignment:
Q  515 gctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttgagtt 614  Q
    ||||||||||||||||||||||||||  ||| | ||| |||||| | ||||  | || ||||||||||| ||||||||||||| ||   | |||| || |    
T  18880328 gctgacaatgaaccgaaccaactcgattatagttcgacattcgactcgatatctaatccgttgaacttggttcatgaacctaacgagctggacttaagct 18880229  T
Q  615 taaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatga 683  Q
     ||||||||| ||||||| |||||||| ||||||| | ||| |||| |||| ||||||| ||| |||||    
T  18880228 gaaaattaagttcgttaattaaatgagctgaacttgagctacatatagttcaactcgttaggtacatga 18880160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 514 - 689
Target Start/End: Complemental strand, 24536144 - 24535969
Alignment:
Q  514 ggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttgagt 613  Q
    |||||| ||||||| ||||||||| ||||||| | | ||| |  ||||||||||| ||| ||||||  || |||||||| | |||||    || |||||     
T  24536144 ggctgaaaatgaactgaaccaacttgaaaatagttcaagacttaatttgataattaatttgttgaatctggttcatgaatcaaatgagctaaatttgagc 24536045  T
Q  614 ttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatgaaccagc 689  Q
    | ||||||||| |||||||||||| |||||||| ||||||||  | ||| |||||| |||||| ||||||||||||    
T  24536044 tcaaaattaagttcgttaaataaacgagttgaatttaaactatgtttggctcgactagtttggatcatgaaccagc 24535969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 571 - 685
Target Start/End: Complemental strand, 26218127 - 26218013
Alignment:
Q  571 ttcgttgaacttgattcatgaacctaatgaatcgaacttgagtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactc 670  Q
    ||||||||||||| |||||||||| || ||  |||||||||| | || |||||| ||||||| |||||||||| ||||| |  || |||| |||||||||    
T  26218127 ttcgttgaacttggttcatgaaccaaacgagccgaacttgagctaaagattaagttcgttaactaaatgagttaaacttgagttatatatagttcgactc 26218028  T
Q  671 gtttggttcatgaac 685  Q
    |||||||||| ||||    
T  26218027 gtttggttcacgaac 26218013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 609 - 687
Target Start/End: Complemental strand, 28431108 - 28431030
Alignment:
Q  609 tgagtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatgaacca 687  Q
    |||||| |||||||||| ||||||||||| ||| ||||||| ||||||||| ||||| | |||||||||||||||||||    
T  28431108 tgagttgaaaattaagcccgttaaataaacgagctgaacttgaactaaataaggttcaaatcgtttggttcatgaacca 28431030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 510 - 683
Target Start/End: Complemental strand, 31022004 - 31021831
Alignment:
Q  510 ctagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaactt 609  Q
    ||||| |||||||||||||||||||||||||| ||| | ||  | |||| | ||||||| | |||||||  ||| |||||||||| |||||   ||| ||    
T  31022004 ctaggactgacaatgaaccgaaccaactcgaatatagttcggaactcgactcgataattaactcgttgagtttggttcatgaaccaaatgagctgaattt 31021905  T
Q  610 gagtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatga 683  Q
    ||| || |||||||| | ||||| |||||||| |||| |||| ||| | || ||||| |||||||| |||||||    
T  31021904 gagcttgaaattaagtttgttaactaaatgagctgaatttaagctatacatagttcgtctcgtttgattcatga 31021831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 514 - 649
Target Start/End: Complemental strand, 39414319 - 39414183
Alignment:
Q  514 ggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttga-g 612  Q
    |||||| |||||||||||||||||||| |||| | ||| | |  ||| || |||| | |||||||||||| | ||||||||||||||   |||||| | |    
T  39414319 ggctgaaaatgaaccgaaccaactcgacaatagttcgaaacttaattcgacaattaactcgttgaacttggtccatgaacctaatgagctgaactttaag 39414220  T
Q  613 tttaaaattaagctcgttaaataaatgagttgaactt 649  Q
    || ||||||||| |||||||||||||||| |||||||    
T  39414219 ttaaaaattaagttcgttaaataaatgagctgaactt 39414183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 510 - 649
Target Start/End: Original strand, 1840686 - 1840825
Alignment:
Q  510 ctagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaactt 609  Q
    |||||| || ||||||||||||||||||||| |||| | |   | || ||| || |||| | |||||||||||| |||||||||| |||||   ||||||    
T  1840686 ctagggttggcaatgaaccgaaccaactcgacaatagttcagaactcaattcgacaattaactcgttgaacttggttcatgaaccaaatgagctgaactt 1840785  T
Q  610 gagtttaaaattaagctcgttaaataaatgagttgaactt 649  Q
    ||| | ||||||||| |||| ||||||||||| |||||||    
T  1840786 gagctgaaaattaagttcgtgaaataaatgagctgaactt 1840825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 565 - 680
Target Start/End: Complemental strand, 2676102 - 2675987
Alignment:
Q  565 aattgattcgttgaacttgattcatgaacctaatgaatcgaacttgagtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggtt 664  Q
    ||||||||||| ||||| | |||||||||| ||||| ||||||||||| | ||||||||| |||| || ||| | | |||||||| ||||| || |  ||    
T  2676102 aattgattcgtcgaactaggttcatgaaccaaatgagtcgaacttgagctgaaaattaagttcgtcaactaattaaattgaacttgaactatatgtaatt 2676003  T
Q  665 cgactcgtttggttca 680  Q
    ||||||||||||||||    
T  2676002 cgactcgtttggttca 2675987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 562 - 685
Target Start/End: Original strand, 14500757 - 14500880
Alignment:
Q  562 gataattgattcgttgaacttgattcatgaacctaatgaatcgaacttgagtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatg 661  Q
    |||||||  ||||||||||||| |||||||||| || ||  |||||||||| | || |||||| ||||||| | |||||||||||||| |  || ||||     
T  14500757 gataattagttcgttgaacttggttcatgaaccaaacgagccgaacttgagctaaagattaagttcgttaactgaatgagttgaacttgagttatatata 14500856  T
Q  662 gttcgactcgtttggttcatgaac 685  Q
    | ||||||||||||||||| ||||    
T  14500857 gctcgactcgtttggttcacgaac 14500880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 511 - 683
Target Start/End: Complemental strand, 29328183 - 29328008
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    |||||||||||||||||||||| |||||||  ||| | ||| |||||| | |||| || || |||||||||||||||||||||||||  |   | |||||    
T  29328183 tagggctgacaatgaaccgaacaaactcgattatagttcgacattcgactcgatatttaatccgttgaacttgattcatgaacctaa-cagctggacttg 29328085  T
Q  611 agtttaaaattaagctcgttaaataaatgagttgaacttaaac----taaatatggttcgactcgtttggttcatga 683  Q
    || | ||||||||| ||||||| |||||||| | ||||| | |    || |||| |||||||||||| |||||||||    
T  29328084 agctgaaaattaagttcgttaattaaatgagcttaacttgagctacgtacatatagttcgactcgttaggttcatga 29328008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 511 - 649
Target Start/End: Complemental strand, 1091263 - 1091126
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    |||||||||| ||||||||||||||||  |||| | | | ||| |||||| ||||||  |||||||||||||  ||||  |||  ||||  |||||||||    
T  1091263 tagggctgacgatgaaccgaaccaacttaaaaaaagttcaagactcgattcgataatgaattcgttgaacttagttcacaaactaaatgggtcgaacttg 1091164  T
Q  611 agtttaaaattaagctcgttaaataaatgagttgaactt 649  Q
    || |||||| |||| || |||||||||||||||||||||    
T  1091163 ag-ttaaaaataagttcattaaataaatgagttgaactt 1091126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 553 - 683
Target Start/End: Original strand, 20190626 - 20190756
Alignment:
Q  553 attcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttgagtttaaaattaagctcgttaaataaatgagttgaacttaaa 652  Q
    |||||||| |||||||||||| | ||||||| |||||||||| |||||  |||||||||| | ||||||||| ||| |   ||| |||| ||||||| |     
T  20190626 attcgattcgataattgattcatcgaacttggttcatgaaccaaatgagccgaacttgagctcaaaattaagttcgctgcctaattgagctgaacttgag 20190725  T
Q  653 ctaaatatggttcgactcgtttggttcatga 683  Q
    ||| || | |||||| |||||||||||||||    
T  20190726 ctatatgtagttcgaatcgtttggttcatga 20190756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 555 - 685
Target Start/End: Original strand, 30660951 - 30661081
Alignment:
Q  555 tcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttgagtttaaaattaagctcgttaaataaatgagttgaacttaaact 654  Q
    |||||| |||||||||||  ||||||||  |||||||||  |||||   ||| || |||| ||||||||| | ||||| || |||||| |||| | ||||    
T  30660951 tcgattcgataattgatttattgaacttagttcatgaactaaatgagctgaatttaagttgaaaattaagtttgttaattatatgagtcgaacatgaact 30661050  T
Q  655 aaatatggttcgactcgtttggttcatgaac 685  Q
    | |||| ||||||||||||||||||||||||    
T  30661051 atatatagttcgactcgtttggttcatgaac 30661081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 571 - 678
Target Start/End: Original strand, 11136067 - 11136173
Alignment:
Q  571 ttcgttgaacttgattcatgaacctaatgaatcgaacttgagtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactc 670  Q
    ||||||||||||| |||| ||||| || ||  |||||||||| | || |||||| ||||||| |||||||||||||||| |  || |||| |||||||||    
T  11136067 ttcgttgaacttggttca-gaaccaaacgagccgaacttgagctaaagattaagttcgttaactaaatgagttgaacttgagttatatatagttcgactc 11136165  T
Q  671 gtttggtt 678  Q
    ||||||||    
T  11136166 gtttggtt 11136173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 572 - 683
Target Start/End: Original strand, 19282175 - 19282286
Alignment:
Q  572 tcgttgaacttgattcatgaacctaatgaatcgaacttgagtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcg 671  Q
    |||||||||||| |||||||||| |||||   ||||||||| | ||||||| | ||||||| || ||||| ||||||| ||||  |||| ||||||||||    
T  19282175 tcgttgaacttggttcatgaaccaaatgagctgaacttgagctgaaaattaggttcgttaagtagatgagctgaacttgaactgtatatagttcgactcg 19282274  T
Q  672 tttggttcatga 683  Q
     ||| |||||||    
T  19282275 gttgattcatga 19282286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 596 - 685
Target Start/End: Complemental strand, 30051509 - 30051420
Alignment:
Q  596 aatgaatcgaacttgagtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatgaac 685  Q
    ||||||||||| ||||| | ||||||||| | ||||| || |||||| |||| | ||||| |||| ||||||||||||| ||||||||||    
T  30051509 aatgaatcgaatttgagatgaaaattaagtttgttaattatatgagtcgaacatgaactatatatagttcgactcgtttagttcatgaac 30051420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 596 - 632
Target Start/End: Complemental strand, 24202757 - 24202721
Alignment:
Q  596 aatgaatcgaacttgagtttaaaattaagctcgttaa 632  Q
    ||||||||||||||||||| |||||||||||||||||    
T  24202757 aatgaatcgaacttgagttgaaaattaagctcgttaa 24202721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 515 - 655
Target Start/End: Original strand, 17168447 - 17168589
Alignment:
Q  515 gctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttgagtt 614  Q
    |||||||||||||||||  |||||||||||| |  |||| | |||| |||| || ||| |||||||||| ||||  |||| |||||  ||||||| || |    
T  17168447 gctgacaatgaaccgaagtaactcgaaaatagtttgagactagattcgatatttaatttgttgaacttggttcacaaaccaaatgagccgaacttaagct 17168546  T
Q  615 --taaaattaagctcgttaaataaatgagttgaacttaaacta 655  Q
       ||||||||  |||||| ||||| ||||||||||| |||||    
T  17168547 caaaaaattaacttcgttatataaacgagttgaacttgaacta 17168589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 629 - 664
Target Start/End: Complemental strand, 34725210 - 34725175
Alignment:
Q  629 ttaaataaatgagttgaacttaaactaaatatggtt 664  Q
    ||||||||||||||||||||| ||||||||||||||    
T  34725210 ttaaataaatgagttgaacttgaactaaatatggtt 34725175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 616 - 683
Target Start/End: Complemental strand, 43386762 - 43386695
Alignment:
Q  616 aaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatga 683  Q
    ||||||||| || |||||||||||| |||||||| |  || | ||||||| |||||||||||||||||    
T  43386762 aaaattaagttctttaaataaatgaattgaacttgagttatagatggttcaactcgtttggttcatga 43386695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 122; Significance: 3e-62; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 508 - 689
Target Start/End: Complemental strand, 12710845 - 12710664
Alignment:
Q  508 aactagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaac 607  Q
    ||||||||||| |||||||||||||||||||||||||| | |||||||||||| ||||||||| |||||||||||| |||||||||| ||||| ||||||    
T  12710845 aactagggctggcaatgaaccgaaccaactcgaaaatagttcgagattcgattcgataattgactcgttgaacttggttcatgaaccaaatgagtcgaac 12710746  T
Q  608 ttgagtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatgaaccagc 689  Q
    ||||||| ||||||||||||||||||||||||||| |||||| |  | | ||||||||||||||||||||||||||||||||    
T  12710745 ttgagttgaaaattaagctcgttaaataaatgagtcgaacttgagttgagtatggttcgactcgtttggttcatgaaccagc 12710664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 510 - 689
Target Start/End: Complemental strand, 40943702 - 40943523
Alignment:
Q  510 ctagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaactt 609  Q
    ||||||||| |||| ||||||||||||||||||||| | ||| | ||||||||||||||| ||| ||| ||||| |||||||||| ||||| ||||||||    
T  40943702 ctagggctggcaataaaccgaaccaactcgaaaatagttcgatactcgatttgataattggttcattggacttggttcatgaaccaaatgagtcgaactt 40943603  T
Q  610 gagtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatgaaccagc 689  Q
    ||||| |||||||||||||||||||||||||||||||||| |||| | ||||||||||||||||||||||||||||||||    
T  40943602 gagttgaaaattaagctcgttaaataaatgagttgaacttgaacttagtatggttcgactcgtttggttcatgaaccagc 40943523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 511 - 689
Target Start/End: Original strand, 30662131 - 30662309
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    ||||||||||||||| ||||||||||||||||||| |  ||||||||||| ||||||||| |||||||||||| |||||||| | ||||| |||||||||    
T  30662131 tagggctgacaatgagccgaaccaactcgaaaatagtttgagattcgattcgataattgactcgttgaacttggttcatgaatcaaatgagtcgaacttg 30662230  T
Q  611 agtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatgaaccagc 689  Q
    |||| ||||||||||||||||||||||||||| |||||| |  | | ||| ||||||||||||||||||||||||||||    
T  30662231 agttgaaaattaagctcgttaaataaatgagtcgaacttgagttgagtatagttcgactcgtttggttcatgaaccagc 30662309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 511 - 689
Target Start/End: Original strand, 20550202 - 20550380
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    |||| ||| ||||||||| |||||||||||||||| | ||| | |||||| ||||||||||| |||||||||| |||| ||||| ||||| |||||| ||    
T  20550202 taggcctgtcaatgaaccaaaccaactcgaaaatagttcgatactcgattcgataattgatttgttgaacttggttcacgaaccaaatgagtcgaacatg 20550301  T
Q  611 agtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatgaaccagc 689  Q
    |||| ||||||||  ||||||||||||||||||| |||| |||||| |||||||||||||||||| |||||||||||||    
T  20550302 agttgaaaattaaattcgttaaataaatgagttgtacttgaactaagtatggttcgactcgtttgattcatgaaccagc 20550380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 512 - 683
Target Start/End: Original strand, 26049541 - 26049712
Alignment:
Q  512 agggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttga 611  Q
    ||||||| |||||||||||||||||||||||||| |  ||||||||||| |||||||||   |||||||||| |||||||| | ||||| ||||||||||    
T  26049541 agggctggcaatgaaccgaaccaactcgaaaatagtttgagattcgattcgataattgacctgttgaacttggttcatgaatcaaatgagtcgaacttga 26049640  T
Q  612 gtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatga 683  Q
    ||| ||||||||||||||||||||||| ||| |||||| |  | | |||| ||||| ||||| |||||||||    
T  26049641 gttgaaaattaagctcgttaaataaattagtcgaacttgagttgagtatgattcgattcgttaggttcatga 26049712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 579 - 689
Target Start/End: Original strand, 54432259 - 54432369
Alignment:
Q  579 acttgattcatgaacctaatgaatcgaacttgagtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggtt 678  Q
    ||||| |||||||||  ||||| ||||||||||||| |||||||||||||||||||||||||||||||||| |||| | || ||||||||||||||||||    
T  54432259 acttggttcatgaactaaatgagtcgaacttgagttaaaaattaagctcgttaaataaatgagttgaacttgaacttagtacggttcgactcgtttggtt 54432358  T
Q  679 catgaaccagc 689  Q
    |||||||||||    
T  54432359 catgaaccagc 54432369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 510 - 683
Target Start/End: Original strand, 46293212 - 46293385
Alignment:
Q  510 ctagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaactt 609  Q
    |||||||||||||||||||||| ||||||||| ||| | | | |||||| |||| ||||| |   ||||| ||| |||||||||| |||||  |||||||    
T  46293212 ctagggctgacaatgaaccgaatcaactcgaatatagttcaaaattcgacttgacaattggtcaattgaatttggttcatgaaccaaatgagccgaactt 46293311  T
Q  610 gagtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatga 683  Q
    ||| | ||||||||| ||||||| |||||||||||||||||||||| | || |||||| |||||||||||||||    
T  46293312 gagctgaaaattaagttcgttaattaaatgagttgaacttaaactataaatagttcgattcgtttggttcatga 46293385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 530 - 684
Target Start/End: Original strand, 48730856 - 48731010
Alignment:
Q  530 aaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttgagtttaaaattaagctcgt 629  Q
    |||||||||||||||| | |||||||||||||| ||||| ||||||| ||||||||||||||||| ||| | || ||||| |||  |||||||| ||||     
T  48730856 aaccaactcgaaaatagttcgagattcgatttgctaattaattcgttaaacttgattcatgaaccaaataagtcaaacttaagtgcaaaattaaactcga 48730955  T
Q  630 taaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatgaa 684  Q
    |||||||||||||||||| |||| ||| ||| |||||| ||||||  ||||||||    
T  48730956 taaataaatgagttgaacataaattaagtatagttcgattcgtttaattcatgaa 48731010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 511 - 683
Target Start/End: Complemental strand, 39135494 - 39135322
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    |||||||| |||| ||||||||||||||||| ||| | |   |||||| | || ||||| ||| ||||||||| |||||||||| |||||  ||||||||    
T  39135494 tagggctggcaataaaccgaaccaactcgaatatagttcataattcgactcgacaattggttcattgaacttggttcatgaaccaaatgagccgaacttg 39135395  T
Q  611 agtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatga 683  Q
    || | ||||||||| ||||||| |||||||| ||||||||||||| | ||||||||| ||||| |||||||||    
T  39135394 agctgaaaattaagttcgttaattaaatgagctgaacttaaactatagatggttcgattcgttaggttcatga 39135322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 509 - 680
Target Start/End: Original strand, 54393441 - 54393612
Alignment:
Q  509 actagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaact 608  Q
    |||||||||| |||||||||||||||||||||  | | | ||  |||||||| || ||||||||||||||||||| ||||| |||| |||||  ||||||    
T  54393441 actagggctggcaatgaaccgaaccaactcgattaaagttcgtaattcgattcgacaattgattcgttgaacttggttcataaaccaaatgagccgaact 54393540  T
Q  609 tgagtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttca 680  Q
    |||| | ||||||||| |||| |||||| ||||  |||||| ||||| || | |||||||||||||||||||    
T  54393541 tgagctgaaaattaagttcgtcaaataattgagccgaacttgaactatatgtagttcgactcgtttggttca 54393612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 511 - 683
Target Start/End: Original strand, 9505121 - 9505293
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    |||||||| ||||||||||||||||||||| |||| | ||  | |||||| || |||| | |||||||||||| |||||||||| ||||| | |||||||    
T  9505121 tagggctggcaatgaaccgaaccaactcgacaatagttcggaactcgattcgacaattaactcgttgaacttggttcatgaaccaaatgagttgaacttg 9505220  T
Q  611 agtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatga 683  Q
    || | ||||||||| |||||||||||||||| ||||||| |  || |||| |||||  ||| |||||||||||    
T  9505221 agctgaaaattaagttcgttaaataaatgagctgaacttgagatatatatagttcggttcggttggttcatga 9505293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 507 - 683
Target Start/End: Complemental strand, 32689313 - 32689137
Alignment:
Q  507 taactagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaa 606  Q
    ||||||||||||||||||||||||||||||||||  ||| | ||| |||||| | ||||  | || ||||||||||| ||||||||||||| ||   | |    
T  32689313 taactagggctgacaatgaaccgaaccaactcgattatagttcgacattcgactcgatatctaatccgttgaacttggttcatgaacctaacgagctgga 32689214  T
Q  607 cttgagtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatga 683  Q
    |||||| | ||||||||| ||||||| |||||||| ||||||| | ||| |||| ||||||||||||  ||||||||    
T  32689213 cttgagctgaaaattaagttcgttaattaaatgagctgaacttgagctacatatagttcgactcgttaagttcatga 32689137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 511 - 680
Target Start/End: Original strand, 33438731 - 33438900
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    ||||||||||||||||||||||||||||||  | | |  |  |||||||| || ||||||||||||||||||| |||||||||| ||||| |||||||||    
T  33438731 tagggctgacaatgaaccgaaccaactcgattaaagtttgtaattcgattcgacaattgattcgttgaacttggttcatgaaccaaatgagtcgaacttg 33438830  T
Q  611 agtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttca 680  Q
    || | ||||||||| |||| || ||| |||| | || || ||||| || | |||||||| ||||||||||    
T  33438831 agctgaaaattaagttcgtcaactaattgagctaaagttgaactatatgtagttcgacttgtttggttca 33438900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 509 - 687
Target Start/End: Original strand, 15822347 - 15822525
Alignment:
Q  509 actagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaact 608  Q
    ||||| |||||||| ||| | | |||| ||||||||| | ||| |||||||| | |||||| ||||||||||||| ||||||| || | ||| | |||||    
T  15822347 actagcgctgacaacgaatcaatccaattcgaaaatagttcgaaattcgattcggtaattgtttcgttgaacttggttcatgatccaattgagtagaact 15822446  T
Q  609 tgagtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatgaacca 687  Q
    |||||| |||||||||||||| |||||||||||  |||||| || ||  |||  || |||||||||| |||||||||||    
T  15822447 tgagttgaaaattaagctcgtcaaataaatgagccgaacttgaattacgtataattagactcgtttgattcatgaacca 15822525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 515 - 683
Target Start/End: Complemental strand, 26136469 - 26136301
Alignment:
Q  515 gctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttgagtt 614  Q
    |||||||||||||| |||||||| || |||| |  |||| |||||| | |||||  || |||||||||| || ||||||  | |||  ||||||||||||    
T  26136469 gctgacaatgaacccaaccaacttgataatagtttgagactcgattcgttaattagtttgttgaacttggtttatgaactaagtgagccgaacttgagtt 26136370  T
Q  615 taaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatga 683  Q
     ||||||| | | |||||| ||||||||||||| ||||||| |||| ||| ||||||||||||||||||    
T  26136369 caaaattatgtttgttaaacaaatgagttgaacataaactacatatagtttgactcgtttggttcatga 26136301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 511 - 683
Target Start/End: Original strand, 39469531 - 39469703
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    ||||||||| ||||||| ||||||||||||| ||| | ||  |||||||| |||||||| | | ||||||||| |||||||| | |||||  ||||||||    
T  39469531 tagggctgataatgaactgaaccaactcgaatatagttcgtaattcgattcgataattggtccattgaacttggttcatgaatcaaatgagccgaacttg 39469630  T
Q  611 agtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatga 683  Q
    || | ||||||||| ||||||| |||||||| | ||||| || || | || |||||| ||||| |||||||||    
T  39469631 agctgaaaattaagttcgttaattaaatgagctaaacttgaattatagattgttcgattcgttaggttcatga 39469703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 511 - 649
Target Start/End: Complemental strand, 52199569 - 52199431
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    |||||||||||||||| ||||||||||||| |||| |  | || |||||| || |||| |||||||||||||| |||||||||| || ||   |||||||    
T  52199569 tagggctgacaatgaatcgaaccaactcgacaatagtttgggactcgattcgacaattaattcgttgaacttggttcatgaaccaaacgagctgaacttg 52199470  T
Q  611 agtttaaaattaagctcgttaaataaatgagttgaactt 649  Q
    || | ||||||||| |||||||| ||||||| |||||||    
T  52199469 agctgaaaattaagttcgttaaacaaatgagctgaactt 52199431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 629 - 693
Target Start/End: Complemental strand, 49026641 - 49026577
Alignment:
Q  629 ttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatgaaccagcccga 693  Q
    ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||    
T  49026641 ttaaataaacgagttgaacttgaactaaatatggttcgactcgtttggttcatgaaccaacccga 49026577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 511 - 683
Target Start/End: Complemental strand, 52934952 - 52934780
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    |||| ||| |||||||| ||||||||| || |||| | ||  | |||||| ||||||| | || ||||||||| |||||||||| |||||   |||||||    
T  52934952 taggtctggcaatgaactgaaccaacttgacaatagttcggaactcgattcgataattaactcattgaacttggttcatgaaccaaatgagctgaacttg 52934853  T
Q  611 agtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatga 683  Q
    ||   ||||||||| ||||||||||||||||  |||||| | ||| |||| |||||||||| |||||||||||    
T  52934852 agcagaaaattaagttcgttaaataaatgagccgaacttgatctatatatagttcgactcgattggttcatga 52934780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 520 - 683
Target Start/End: Complemental strand, 41610018 - 41609856
Alignment:
Q  520 caatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttgagtttaaaa 619  Q
    ||||||||||| |||||||||  ||| | ||| |||||| | |||| || || ||||||||||| ||||||||||||| ||   | ||||||| | ||||    
T  41610018 caatgaaccga-ccaactcgattatagttcgacattcgactcgatatttaatccgttgaacttggttcatgaacctaacgagctggacttgagctgaaaa 41609920  T
Q  620 ttaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatga 683  Q
    ||||| ||||||| |||||||| ||||||| | ||| |||| |||||||||||| |||||||||    
T  41609919 ttaagttcgttaattaaatgagctgaacttgagctacatatagttcgactcgttgggttcatga 41609856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 520 - 683
Target Start/End: Original strand, 39942809 - 39942972
Alignment:
Q  520 caatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttgagtttaaaa 619  Q
    |||||||| ||||||||||||  ||| | ||| |||||||| |  |||| ||  |||||||||| ||||||||| ||||||   ||||||||| | ||||    
T  39942809 caatgaactgaaccaactcgagtatagttcgaaattcgattcggcaattaatctgttgaacttggttcatgaacttaatgagctgaacttgagctgaaaa 39942908  T
Q  620 ttaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatga 683  Q
    ||||| |||||||||| ||||| ||||||| |  || | |||| ||||||||||||||| ||||    
T  39942909 ttaagttcgttaaatagatgagctgaacttgagttatagatggctcgactcgtttggtttatga 39942972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 513 - 683
Target Start/End: Original strand, 23206310 - 23206479
Alignment:
Q  513 gggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttgag 612  Q
    |||||| |||||||||||||||||||||  ||| | ||| |||||| |||||| || ||  |||||||||  ||||||||||||| ||   | |||||||    
T  23206310 gggctggcaatgaaccgaaccaactcgattatagttcgacattcgacttgatatttaatctgttgaactttgttcatgaacctaacgagctggacttgag 23206409  T
Q  613 tttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatga 683  Q
     | ||||||||| || |||| |||||||| ||||||||| ||| |||| ||||||||  || |||||||||    
T  23206410 ctgaaaattaagttc-ttaattaaatgagctgaacttaagctacatatagttcgacttattaggttcatga 23206479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 511 - 683
Target Start/End: Complemental strand, 25253842 - 25253670
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    |||||||| |||||||||||||||||||||| ||| |  |  | |||| | || |||  | | |||||||||| |||||||||| |||||   |||||||    
T  25253842 tagggctggcaatgaaccgaaccaactcgaatatagtttggaactcgactcgacaataaacttgttgaacttggttcatgaaccaaatgagctgaacttg 25253743  T
Q  611 agtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatga 683  Q
    || | ||||||||| ||||||||||||||||  |||||||| ||| || |   |||||||| |||||||||||    
T  25253742 agctaaaaattaagttcgttaaataaatgagccgaacttaagctatatgtaactcgactcgattggttcatga 25253670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 511 - 683
Target Start/End: Complemental strand, 44574666 - 44574494
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    |||||||| |||||||||||  ||||||||| ||| | |||   |||| | |  |||| |||||||||||||  ||| ||||||||||||   |||||||    
T  44574666 tagggctggcaatgaaccgagacaactcgaatatagttcgaagctcgactcggcaattaattcgttgaacttagttcgtgaacctaatgagctgaacttg 44574567  T
Q  611 agtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatga 683  Q
    |||| ||||| ||| ||||| | ||||||||  |||||| | ||| |||| ||||| ||||||||||||||||    
T  44574566 agttaaaaatcaagttcgtttattaaatgagccgaacttgagctacatatagttcggctcgtttggttcatga 44574494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 574 - 685
Target Start/End: Complemental strand, 5418755 - 5418644
Alignment:
Q  574 gttgaacttgattcatgaacctaatgaatcgaacttgagtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtt 673  Q
    |||||||||  |||||||||| || || ||||||||||| | || |||||| ||||||| |||||||||||||||| |  || |||| ||||||||| ||    
T  5418755 gttgaacttagttcatgaaccaaacgagtcgaacttgagctaaagattaagttcgttaactaaatgagttgaacttgagttatatatagttcgactcatt 5418656  T
Q  674 tggttcatgaac 685  Q
    ||||||| ||||    
T  5418655 tggttcacgaac 5418644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 519 - 646
Target Start/End: Complemental strand, 18074708 - 18074581
Alignment:
Q  519 acaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttgagtttaaa 618  Q
    ||||||||| || |||||||||| | | | ||||| |||||||||||||| |||||||||| ||| |||||||||  ||||| | ||| ||||  | |||    
T  18074708 acaatgaactgagccaactcgaatagagttcgagactcgatttgataattaattcgttgaatttgtttcatgaactaaatgagttgaatttgaactgaaa 18074609  T
Q  619 attaagctcgttaaataaatgagttgaa 646  Q
    |||||| ||||||| |||||||| ||||    
T  18074608 attaagttcgttaactaaatgagctgaa 18074581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 520 - 683
Target Start/End: Complemental strand, 28242714 - 28242551
Alignment:
Q  520 caatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttgagtttaaaa 619  Q
    |||||||||||| |||||||| |||||| ||  | | |||| || |||| | |||||||| ||| |||||||||| |||||   ||| ||||| | ||||    
T  28242714 caatgaaccgaatcaactcgacaataattcggaacttgattcgacaattaactcgttgaatttggttcatgaaccaaatgagctgaatttgagctgaaaa 28242615  T
Q  620 ttaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatga 683  Q
    ||||  |||||||||||||||  ||||||| | ||  |||| |||||||||| |||||||||||    
T  28242614 ttaaattcgttaaataaatgatctgaacttgagctgtatatagttcgactcggttggttcatga 28242551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 511 - 684
Target Start/End: Original strand, 19560774 - 19560947
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    |||||||| |||||||||||||||||||||| ||| | ||  |||||| | || |||| |||||||||||||| |||||||||  ||  |   |||||||    
T  19560774 tagggctggcaatgaaccgaaccaactcgaatatagttcggaattcgactcgacaattaattcgttgaacttggttcatgaacgaaacaagctgaacttg 19560873  T
Q  611 agtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatgaa 684  Q
    |||| | | |||||  |||||||||||||||  |||||| |  || |||| ||| |||||| || |||||||||    
T  19560874 agttaagagttaagtccgttaaataaatgagccgaacttgagttatatatagtttgactcgatttgttcatgaa 19560947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 571 - 683
Target Start/End: Complemental strand, 50965484 - 50965371
Alignment:
Q  571 ttcgttgaacttgattcatgaacctaatgaatcgaacttgag-tttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgact 669  Q
    |||||| || ||| ||||||||||||||||   ||| ||||| |  ||||||||| |||||||||||||||| ||||||| | ||| |||||||||||||    
T  50965484 ttcgttaaatttggttcatgaacctaatgagctgaatttgagctgaaaaattaagttcgttaaataaatgagctgaacttgagctatatatggttcgact 50965385  T
Q  670 cgtttggttcatga 683  Q
    || |||| ||||||    
T  50965384 cgattggctcatga 50965371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 571 - 683
Target Start/End: Complemental strand, 51068619 - 51068506
Alignment:
Q  571 ttcgttgaacttgattcatgaacctaatgaatcgaacttgag-tttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgact 669  Q
    |||||| || ||| ||||||||||||||||   ||| ||||| |  ||||||||| |||||||||||||||| ||||||| | ||| |||||||||||||    
T  51068619 ttcgttaaatttggttcatgaacctaatgagctgaatttgagctgaaaaattaagttcgttaaataaatgagctgaacttgagctatatatggttcgact 51068520  T
Q  670 cgtttggttcatga 683  Q
    || |||| ||||||    
T  51068519 cgattggctcatga 51068506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 510 - 612
Target Start/End: Complemental strand, 45714837 - 45714735
Alignment:
Q  510 ctagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaactt 609  Q
    |||| |||| |||||||| ||||||||||||  | | | ||  |||||||| || ||||||||||||||||||||||||| || | ||||| ||||||||    
T  45714837 ctagagctggcaatgaactgaaccaactcgattaaagttcgttattcgattcgacaattgattcgttgaacttgattcataaatcaaatgagtcgaactt 45714738  T
Q  610 gag 612  Q
    |||    
T  45714737 gag 45714735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 526 - 649
Target Start/End: Complemental strand, 31589747 - 31589624
Alignment:
Q  526 accgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttgagtttaaaattaagc 625  Q
    ||||||||||||| |||||||| | | ||| |||| | ||||  |||| ||| ||||| ||||| |||| ||| | || |||||||||| |||||||||     
T  31589747 accgaaccaactccaaaataattcaaaatttgattcggtaatcaattcattggacttggttcataaaccaaataagtcaaacttgagttgaaaattaagt 31589648  T
Q  626 tcgttaaataaatgagttgaactt 649  Q
    | |||||||||| | |||||||||    
T  31589647 ttgttaaataaacgggttgaactt 31589624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 511 - 569
Target Start/End: Original strand, 54432177 - 54432235
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattg 569  Q
    |||||||| |||||||||||||||||||||||||| | ||| | |||||| ||||||||    
T  54432177 tagggctggcaatgaaccgaaccaactcgaaaatagttcgatactcgattcgataattg 54432235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 605 - 649
Target Start/End: Complemental strand, 29536643 - 29536599
Alignment:
Q  605 aacttgagtttaaaattaagctcgttaaataaatgagttgaactt 649  Q
    |||||||||| |||||||| |||||||||||||| ||||||||||    
T  29536643 aacttgagttgaaaattaaactcgttaaataaataagttgaactt 29536599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 604 - 680
Target Start/End: Original strand, 53529683 - 53529759
Alignment:
Q  604 gaacttgagtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttca 680  Q
    ||||||||| | ||||||||| |||| || ||| |||| ||||||| ||||| || | |||||||||||||||||||    
T  53529683 gaacttgagctgaaaattaagttcgtcaactaattgagctgaacttgaactatatgttgttcgactcgtttggttca 53529759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 565 - 632
Target Start/End: Original strand, 25582618 - 25582685
Alignment:
Q  565 aattgattcgttgaacttgattcatgaacctaatgaatcgaacttgagtttaaaattaagctcgttaa 632  Q
    |||||||||||| || ||||||||| || | ||||||| ||| ||||||| ||||||||| |||||||    
T  25582618 aattgattcgttaaatttgattcataaatcaaatgaattgaatttgagttgaaaattaagttcgttaa 25582685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 604 - 683
Target Start/End: Complemental strand, 52199436 - 52199357
Alignment:
Q  604 gaacttgagtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatga 683  Q
    ||||||||| | ||||||||| |||||||| ||||||| ||||||| | ||  |||| |||||||||  |||||||||||    
T  52199436 gaacttgagctgaaaattaagttcgttaaacaaatgagctgaacttgagctttatatagttcgactcagttggttcatga 52199357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 118; Significance: 8e-60; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 118; E-Value: 8e-60
Query Start/End: Original strand, 512 - 689
Target Start/End: Original strand, 18249994 - 18250171
Alignment:
Q  512 agggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttga 611  Q
    ||||||| |||||||||||||||||||||||||| | | ||| |||||| |||||||||||||||||||||| |||||||||| ||||| ||||||||||    
T  18249994 agggctggcaatgaaccgaaccaactcgaaaatagttcaagactcgattcgataattgattcgttgaacttggttcatgaaccaaatgagtcgaacttga 18250093  T
Q  612 gtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatgaaccagc 689  Q
    ||| ||||||| |||||||||||||||||||||||||| |||||| |||| |||||||||| ||||||||||||||||    
T  18250094 gttgaaaattatgctcgttaaataaatgagttgaacttgaactaagtatgattcgactcgtctggttcatgaaccagc 18250171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 511 - 689
Target Start/End: Original strand, 33898944 - 33899122
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    ||||||||||||||||||||||||||||||||||| | ||| |||||||| || ||||  ||| ||| ||||| |||||||||| ||||| |||||||||    
T  33898944 tagggctgacaatgaaccgaaccaactcgaaaatagttcgatattcgattcgagaattagttcattggacttggttcatgaaccaaatgagtcgaacttg 33899043  T
Q  611 agtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatgaaccagc 689  Q
    |||| ||||||||||||||||||||||||||||||||||||| | | ||||||||||||||||||||||||||||||||    
T  33899044 agttgaaaattaagctcgttaaataaatgagttgaacttaaatttagtatggttcgactcgtttggttcatgaaccagc 33899122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 511 - 689
Target Start/End: Original strand, 46573612 - 46573790
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    |||||||| ||||||||||||||||||| |||||||| |||||||||||| ||||||||| |||||||||||| |||||||||| ||||| ||||||||     
T  46573612 tagggctggcaatgaaccgaaccaactcaaaaataattcgagattcgattcgataattgactcgttgaacttggttcatgaaccaaatgagtcgaactta 46573711  T
Q  611 agtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatgaaccagc 689  Q
    |||| ||||||||||||||||||||||||||| |||||| |  | | ||||||||||||||||||||||||||||||||    
T  46573712 agttgaaaattaagctcgttaaataaatgagtcgaacttgagttgagtatggttcgactcgtttggttcatgaaccagc 46573790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 511 - 689
Target Start/End: Original strand, 17025361 - 17025539
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    ||||||||||||||||||||||||||||||||||| | | || ||||||| ||||||||| |||||||||||| |||| ||||| ||||| |||||||||    
T  17025361 tagggctgacaatgaaccgaaccaactcgaaaatagttcaaggttcgattcgataattgactcgttgaacttggttcacgaaccaaatgagtcgaacttg 17025460  T
Q  611 agtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatgaaccagc 689  Q
    |||| ||||||||||||||||||||||||||| |||||| |  | | ||||||||||||||||| ||||||||||||||    
T  17025461 agttgaaaattaagctcgttaaataaatgagtcgaacttgagttgagtatggttcgactcgttttgttcatgaaccagc 17025539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 511 - 689
Target Start/End: Original strand, 18740218 - 18740396
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    |||||| | |||||||||||||||||||||||||| | |||||||||||||||||||||| || || |||||| |||||||||| ||||| |||||||||    
T  18740218 tagggccggcaatgaaccgaaccaactcgaaaatagttcgagattcgatttgataattgactcattaaacttggttcatgaaccaaatgagtcgaacttg 18740317  T
Q  611 agtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatgaaccagc 689  Q
    |||| ||||||||||||||||||||||||||| |||||| |  | | ||||||||||||||||| ||||||||||||||    
T  18740318 agttgaaaattaagctcgttaaataaatgagtcgaacttgagttgagtatggttcgactcgtttagttcatgaaccagc 18740396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 508 - 689
Target Start/End: Complemental strand, 26719963 - 26719782
Alignment:
Q  508 aactagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaac 607  Q
    ||||||| ||||||||||| |||||||||||||||||| | ||| | |||||| |||||||| ||| ||| ||||| |||||||||| ||||| ||||||    
T  26719963 aactaggactgacaatgaatcgaaccaactcgaaaatagttcgatactcgattcgataattggttcattggacttggttcatgaaccaaatgagtcgaac 26719864  T
Q  608 ttgagtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatgaaccagc 689  Q
    ||||||| ||||||||| |||||||||||||||||||||||| |||| | |||||||||||||||||| |||||||||||||    
T  26719863 ttgagttgaaaattaagttcgttaaataaatgagttgaacttgaacttagtatggttcgactcgtttgattcatgaaccagc 26719782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 103; E-Value: 8e-51
Query Start/End: Original strand, 511 - 685
Target Start/End: Complemental strand, 36472584 - 36472410
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    ||||||||||||||||||||||||||||||||||||   || | |||||| ||||| |||||||||||||||| |||||||||| |||||  ||||||||    
T  36472584 tagggctgacaatgaaccgaaccaactcgaaaataacttgatactcgattcgataaatgattcgttgaacttggttcatgaaccaaatgagccgaacttg 36472485  T
Q  611 agtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatgaac 685  Q
    |||| ||||||||||||||||||||||| |||||||||| |||  |  |||||||||||||||||||||||||||    
T  36472484 agttgaaaattaagctcgttaaataaataagttgaacttgaaccgagcatggttcgactcgtttggttcatgaac 36472410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 511 - 689
Target Start/End: Original strand, 35543556 - 35543731
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    |||||||||||||||| |||||||||||||||||| |  |||| || ||| |||||||||||||||||||||| |||||||||  ||||| |||||||||    
T  35543556 tagggctgacaatgaatcgaaccaactcgaaaatagtttgagactccattcgataattgattcgttgaacttggttcatgaactaaatgagtcgaacttg 35543655  T
Q  611 agtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatgaaccagc 689  Q
    |||| |||||||||||||   |||||||||||||||||| |||||| |||| |||||||||| ||||||||||||||||    
T  35543656 agttgaaaattaagctcg---aataaatgagttgaacttgaactaagtatgattcgactcgtctggttcatgaaccagc 35543731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 511 - 689
Target Start/End: Original strand, 21760583 - 21760761
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    ||||||||| ||||||||||||||||||||||||| | ||| | |||||| |||||||||||||||||||||  |||| ||||| ||||| |||||||||    
T  21760583 tagggctgataatgaaccgaaccaactcgaaaatagttcgaaactcgattcgataattgattcgttgaactttgttcacgaaccaaatgagtcgaacttg 21760682  T
Q  611 agtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatgaaccagc 689  Q
    |||| |||| ||| ||||||||||||||||||||||||| | ||   |||||||||||||||| | |||||||||||||    
T  21760683 agttgaaaactaaactcgttaaataaatgagttgaacttgagcttcgtatggttcgactcgttagattcatgaaccagc 21760761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 508 - 687
Target Start/End: Original strand, 49034221 - 49034400
Alignment:
Q  508 aactagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaac 607  Q
    ||||||||||| ||| ||||||| |||||||||||||| | ||| |||||||| | |||||| ||||||||||||| |||||||||| ||||| ||||||    
T  49034221 aactagggctggcaacgaaccgatccaactcgaaaatagttcgaaattcgattcggtaattgtttcgttgaacttggttcatgaaccaaatgagtcgaac 49034320  T
Q  608 ttgagtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatgaacca 687  Q
    ||||||| |||||||||||||| |||||||||||| |||||| ||||| ||||  |||||||| |||| || ||||||||    
T  49034321 ttgagttgaaaattaagctcgtcaaataaatgagtcgaacttgaactacatataattcgactcatttgatttatgaacca 49034400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 511 - 689
Target Start/End: Complemental strand, 32357106 - 32356928
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    |||||||||||||||||| ||||||||  |||||| | ||||| |||||| ||||||| ||||||||||||||||||||||||  |||||  |||| |||    
T  32357106 tagggctgacaatgaaccaaaccaacttaaaaatagttcgagactcgattcgataattaattcgttgaacttgattcatgaactaaatgagccgaatttg 32357007  T
Q  611 agtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatgaaccagc 689  Q
    |||| ||||| ||| ||||||| |||| |||||||||||||||||  |||   ||||||| ||||||||||||||||||    
T  32357006 agttgaaaataaagttcgttaagtaaacgagttgaacttaaactatgtataactcgactcatttggttcatgaaccagc 32356928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 514 - 689
Target Start/End: Complemental strand, 33019443 - 33019269
Alignment:
Q  514 ggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttgagt 613  Q
    ||||||||||||||||||||||||| |||||| | ||| | |||||| |||||||| ||||||||||||| |||| ||| | ||| | ||||||||||||    
T  33019443 ggctgacaatgaaccgaaccaactcaaaaatagttcgatactcgattcgataattggttcgttgaacttggttcacgaatcaaataagtcgaacttgagt 33019344  T
Q  614 ttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatgaaccagc 689  Q
    | |||||||| |||||||||| ||| ||||||| || |||| | ||| |||||||| |||||||||||||||||||    
T  33019343 tgaaaattaaactcgttaaat-aataagttgaatttgaacttactatagttcgacttgtttggttcatgaaccagc 33019269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 511 - 683
Target Start/End: Complemental strand, 7448021 - 7447849
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    ||||||||||||||||||||||||||||||| ||| | |   |||||| | || ||||| ||| ||||||||| |||||||||| |||||  ||||||||    
T  7448021 tagggctgacaatgaaccgaaccaactcgaatatagttcataattcgactcgacaattggttcattgaacttggttcatgaaccaaatgagccgaacttg 7447922  T
Q  611 agtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatga 683  Q
    || | ||||||||| ||||||| |||||||||||||||| ||||| | ||||||||| ||||| |||||||||    
T  7447921 agctgaaaattaagttcgttaattaaatgagttgaacttgaactatagatggttcgattcgttaggttcatga 7447849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 562 - 689
Target Start/End: Complemental strand, 30919516 - 30919389
Alignment:
Q  562 gataattgattcgttgaacttgattcatgaacctaatgaatcgaacttgagtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatg 661  Q
    |||||||||||||||||||||| || | ||||| ||||| ||||||||||||| |||| ||| ||||||| ||||||||||||||||| | ||   ||||    
T  30919516 gataattgattcgttgaacttggtttacgaaccaaatgagtcgaacttgagttgaaaactaaactcgttagataaatgagttgaacttgagcttcgtatg 30919417  T
Q  662 gttcgactcgtttggttcatgaaccagc 689  Q
    |||||||||||| |||||||||||||||    
T  30919416 gttcgactcgttaggttcatgaaccagc 30919389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 525 - 683
Target Start/End: Original strand, 29037794 - 29037952
Alignment:
Q  525 aaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttgagtttaaaattaag 624  Q
    ||||| |||| |||||||||| |  |||| |||||| | ||||| ||| | |||||||  |||||||||| |||||  |||||||||||| |||||||||    
T  29037794 aaccgtaccagctcgaaaatagtttgagactcgattcggtaattaatttgctgaactttgttcatgaaccaaatgagacgaacttgagttgaaaattaag 29037893  T
Q  625 ctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatga 683  Q
      ||||||| |||||||||||| |||||||| ||||||||||||||||||| |||||||    
T  29037894 tccgttaaacaaatgagttgaatttaaactatatatggttcgactcgtttgattcatga 29037952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 515 - 655
Target Start/End: Complemental strand, 31491956 - 31491816
Alignment:
Q  515 gctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttgagtt 614  Q
    ||||||||||||||||| |||||| |||||| |  ||||||||||| ||||||| |||||||||||||||  |||||||| ||||| |||||||| |  |    
T  31491956 gctgacaatgaaccgaatcaactcaaaaatagtttgagattcgattcgataattaattcgttgaacttgacacatgaaccaaatgagtcgaacttaaact 31491857  T
Q  615 taaaattaagctcgttaaataaatgagttgaacttaaacta 655  Q
     || |||||| ||||||||||||| |||||||||| |||||    
T  31491856 caatattaagttcgttaaataaattagttgaacttgaacta 31491816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 511 - 683
Target Start/End: Complemental strand, 37334423 - 37334251
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    ||||| ||||||||||||||||||||||||  ||| | ||| |||||||| |||| || || ||||||||||| ||||||||||||| ||   | |||||    
T  37334423 tagggttgacaatgaaccgaaccaactcgattatagttcgacattcgattcgatatttaatccgttgaacttggttcatgaacctaacgagctggacttg 37334324  T
Q  611 agtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatga 683  Q
    || | ||||||||| ||||||| |||||||| ||||||| | ||| |||| ||||||||| || |||||||||    
T  37334323 agctgaaaattaagttcgttaattaaatgagctgaacttgagctacatatagttcgactcattaggttcatga 37334251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 512 - 683
Target Start/End: Complemental strand, 36927143 - 36926972
Alignment:
Q  512 agggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttga 611  Q
    ||||||| |||||||||||||||||||||  ||| | ||| |||||| | ||||  | || ||||||||||| ||||||||||||| || | | ||||||    
T  36927143 agggctggcaatgaaccgaaccaactcgattatagttcgacattcgactcgatatctaatccgttgaacttggttcatgaacctaacgagttggacttga 36927044  T
Q  612 gtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatga 683  Q
    | | ||||||||| ||||||| |||||||||||||||| | ||| |||| |||||||||||| || ||||||    
T  36927043 gctaaaaattaagttcgttaattaaatgagttgaacttgagctacatatagttcgactcgttaggctcatga 36926972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 511 - 683
Target Start/End: Original strand, 5776130 - 5776302
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    ||||| || |||||||||||||||||||||  ||| | ||| |||||| | |||| || || ||||||||||| ||||||||||||| ||   | |||||    
T  5776130 tagggttggcaatgaaccgaaccaactcgattatagttcgacattcgactcgatatttaatccgttgaacttggttcatgaacctaacgagctggacttg 5776229  T
Q  611 agtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatga 683  Q
    || | ||||||||| ||||||| |||||||| ||||||| | ||| |||| |||||||||||| |||||||||    
T  5776230 agctgaaaattaagttcgttaattaaatgagctgaacttgagctacatatagttcgactcgttcggttcatga 5776302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 511 - 683
Target Start/End: Complemental strand, 42072228 - 42072056
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    |||||||||||||| |||||| ||||||||  ||| |  || |||||||| ||||  | || ||||||||||||||||||||||||| ||   | |||||    
T  42072228 tagggctgacaatgtaccgaaacaactcgattatagtttgacattcgattcgatatctaatccgttgaacttgattcatgaacctaacgagctggacttg 42072129  T
Q  611 agtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatga 683  Q
    || | ||||||||| ||||||| |||||||| ||||||| | ||| |||| |||||||||||| |||||||||    
T  42072128 agctgaaaattaagttcgttaattaaatgagctgaacttgagctacatatagttcgactcgttaggttcatga 42072056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 511 - 646
Target Start/End: Complemental strand, 33124840 - 33124705
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    |||||||| ||||||||||||||||||||| |||| |  || | |||||| || |||| | |||||||||||| || ||||||| ||||||| |||||||    
T  33124840 tagggctggcaatgaaccgaaccaactcgacaatagtttgaaactcgattcgacaattaactcgttgaacttggtttatgaaccaaatgaattgaacttg 33124741  T
Q  611 agtttaaaattaagctcgttaaataaatgagttgaa 646  Q
    || | ||||||||| |||||||||||||||| ||||    
T  33124740 agctgaaaattaagttcgttaaataaatgagctgaa 33124705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 508 - 683
Target Start/End: Complemental strand, 43053020 - 43052845
Alignment:
Q  508 aactagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaac 607  Q
    |||||||| || |||||||||||||||||||||  ||| | ||| |||||| | |||| || || ||||||||||| ||||||||||||||||   | ||    
T  43053020 aactagggttggcaatgaaccgaaccaactcgattatagttcgacattcgactcgatatttaatccgttgaacttggttcatgaacctaatgagctggac 43052921  T
Q  608 ttgagtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatga 683  Q
    |||||   ||||||||| ||||||| || ||||| ||||||| | ||| |||| |||||||||||| | |||||||    
T  43052920 ttgagccgaaaattaagttcgttaattagatgagctgaacttgagctacatatagttcgactcgttagattcatga 43052845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 510 - 683
Target Start/End: Original strand, 44421900 - 44422074
Alignment:
Q  510 ctagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaactt 609  Q
    ||||||||| ||||||||||||||||||||| |||| |  | || |||||| || |||| | |||||||||||| |||||||||| || ||   ||||||    
T  44421900 ctagggctgtcaatgaaccgaaccaactcgacaatagtttgggactcgattcgacaattaactcgttgaacttggttcatgaaccaaacgagctgaactt 44421999  T
Q  610 gagtttaaaa-ttaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatga 683  Q
    ||| | |||| ||||| |||||||| ||||||| ||||||| | ||  |||| |||||||||| |||||||||||    
T  44422000 gagctgaaaatttaagttcgttaaacaaatgagctgaacttgagctttatatagttcgactcggttggttcatga 44422074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 511 - 680
Target Start/End: Complemental strand, 3942321 - 3942152
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    ||||||||||||||||||||||||||||||  | | | ||  |||||||| || | ||||||| ||||||||| |||||||||| |||||| |  |||||    
T  3942321 tagggctgacaatgaaccgaaccaactcgattaaagttcgtaattcgattcgacagttgattcattgaacttggttcatgaaccaaatgaaccagacttg 3942222  T
Q  611 agtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttca 680  Q
    || | ||||||||| |||| || ||| |||| ||||||| | ||| || | ||||| |||||||||||||    
T  3942221 agctgaaaattaagttcgtgaattaattgagctgaacttgagctatatgtagttcggctcgtttggttca 3942152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 511 - 684
Target Start/End: Original strand, 28949758 - 28949931
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    |||||||| |||||||||||| ||||||||  ||| | ||| |||||| | ||||  | || ||||||||||| ||||||||||||| ||   | | |||    
T  28949758 tagggctggcaatgaaccgaatcaactcgattatagttcgacattcgactcgatatctaatccgttgaacttggttcatgaacctaacgagctggaattg 28949857  T
Q  611 agtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatgaa 684  Q
    || | ||||||||| ||||||| |||||||| ||||||| | ||| |||| |||||||||||| ||||||||||    
T  28949858 agctaaaaattaagttcgttaattaaatgagctgaacttgagctacatatagttcgactcgttaggttcatgaa 28949931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 511 - 683
Target Start/End: Original strand, 5794936 - 5795108
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    |||||||| ||||||||||||||||| |||  ||| | ||| |||||| | ||||  | || ||||||||||| ||||||||||||| ||   | |||||    
T  5794936 tagggctggcaatgaaccgaaccaacccgattatagttcgacattcgactcgatatctaatccgttgaacttggttcatgaacctaacgagctggacttg 5795035  T
Q  611 agtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatga 683  Q
    || | ||||||||| ||||||| |||||||| ||||||| | ||| |||| |||| ||||||| |||||||||    
T  5795036 agctgaaaattaagttcgttaattaaatgagctgaacttgagctacatatagttcaactcgttaggttcatga 5795108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 511 - 683
Target Start/End: Complemental strand, 20401141 - 20400969
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    ||||| ||||||||||||||||||||||||| ||| | ||| |||||| | | |||||  | | ||||| ||| |||||||||||| ||||  |||||||    
T  20401141 tagggttgacaatgaaccgaaccaactcgaatatagttcgaaattcgactcggtaattagtccattgaatttggttcatgaacctactgaactgaacttg 20401042  T
Q  611 agtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatga 683  Q
    || | || |||||| || |||| |||||||| ||||||| |  || |||| ||||||||||||||||| ||||    
T  20401041 agctaaatattaagttctttaattaaatgagctgaacttgagttacatatagttcgactcgtttggttaatga 20400969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 511 - 671
Target Start/End: Complemental strand, 33935653 - 33935493
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    |||||||| ||||||| ||||||||||||| |||| |  | || |||||| ||||||| | |||||||||||| |||||||||| || ||   |||||||    
T  33935653 tagggctggcaatgaatcgaaccaactcgacaatagtttgggactcgattcgataattaactcgttgaacttggttcatgaaccaaacgagctgaacttg 33935554  T
Q  611 agtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcg 671  Q
    || | ||||||||| |||||||| ||||||| ||||||| | ||  |||| ||||||||||    
T  33935553 agctgaaaattaagttcgttaaacaaatgagatgaacttgagctttatatagttcgactcg 33935493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 519 - 683
Target Start/End: Complemental strand, 45176382 - 45176218
Alignment:
Q  519 acaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttgagtttaaa 618  Q
    |||||||||||||| |||||||  ||| |  || |||||| | ||||||| || ||||||||||| |||||||||| || ||   |||||| || | |||    
T  45176382 acaatgaaccgaacaaactcgattatagtttgacattcgactcgataattaatccgttgaacttggttcatgaaccaaacgagctgaactttagctgaaa 45176283  T
Q  619 attaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatga 683  Q
    |||||| ||||||| |||||||||||||||| | ||| ||||  ||||||||||| |||||||||    
T  45176282 attaagttcgttaattaaatgagttgaacttgagctacatataattcgactcgttaggttcatga 45176218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 511 - 681
Target Start/End: Complemental strand, 22075208 - 22075038
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    |||||||| ||||||||||||||||||||| |||| |     | |||||| || |||| | ||||||||| || |||| ||||| |||||   |||||||    
T  22075208 tagggctggcaatgaaccgaaccaactcgataatagtttagaactcgattcgacaattaactcgttgaacgtggttcacgaaccaaatgagctgaacttg 22075109  T
Q  611 agtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcat 681  Q
    || | ||||||||| |||||||||||||||| ||||||| | ||  |||| |||||||||| |||||||||    
T  22075108 agctgaaaattaagttcgttaaataaatgagctgaacttgatctgtatatagttcgactcgattggttcat 22075038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 511 - 680
Target Start/End: Original strand, 37401566 - 37401735
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    |||||||||||||||||| |||||| ||||  | | | ||  |||||||| || |||||||| ||||||||||||||||||||| |||||  | ||||||    
T  37401566 tagggctgacaatgaaccaaaccaattcgattagagttcgtaattcgattcgaaaattgatttgttgaacttgattcatgaaccaaatgagccaaacttg 37401665  T
Q  611 agtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttca 680  Q
    |||| ||||||||| |||| || ||| |||| |||| || | ||| || | ||| |||||||||| ||||    
T  37401666 agttgaaaattaagttcgtcaactaattgagctgaagttgagctatatgtagttggactcgtttgattca 37401735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 511 - 683
Target Start/End: Original strand, 665847 - 666019
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    |||||||| |||||||||||||||||||||  ||| | ||| |||||| | |||| || || |||| || ||| ||||||||||||| ||   | |||||    
T  665847 tagggctggcaatgaaccgaaccaactcgattatagttcgacattcgactcgatatttaatccgttaaatttggttcatgaacctaacgagctggacttg 665946  T
Q  611 agtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatga 683  Q
    || | ||||||||| ||||||| |||||||| |||| || | ||| |||| | |||||||||| |||||||||    
T  665947 agctgaaaattaagttcgttaattaaatgagctgaatttgagctacatatagctcgactcgttaggttcatga 666019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 510 - 685
Target Start/End: Original strand, 11595795 - 11595970
Alignment:
Q  510 ctagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaactt 609  Q
    |||||||||||||||||||||  ||||||||| | | | ||  | |||| | | |||||  ||||||||||||| |||||||||| || ||  |||||||    
T  11595795 ctagggctgacaatgaaccgatacaactcgaataaagttcggaactcgactcggtaattagttcgttgaacttggttcatgaaccaaacgagccgaactt 11595894  T
Q  610 gagtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatgaac 685  Q
    ||| | || |||||| ||||||| |||||||||||| ||| |  || |||| |||||||| |||||||||| ||||    
T  11595895 gagctaaagattaagttcgttaactaaatgagttgaccttgagttatatatagttcgacttgtttggttcacgaac 11595970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 509 - 683
Target Start/End: Original strand, 222224 - 222398
Alignment:
Q  509 actagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaact 608  Q
    |||||||||| ||||||||||||||||||||| |||| |  | || | |||| || |||| | |||||||| ||| |||||||||| || ||   |||||    
T  222224 actagggctggcaatgaaccgaaccaactcgacaatagtttgggacttgattcgacaattaactcgttgaatttggttcatgaaccaaacgagctgaact 222323  T
Q  609 tgagtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatga 683  Q
    |||  | ||||||||  |||||||| ||||||| ||||||| | ||  |||| |||||||||| |||||||||||    
T  222324 tgaactgaaaattaaattcgttaaacaaatgagctgaacttgagctttatatagttcgactcggttggttcatga 222398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 571 - 685
Target Start/End: Complemental strand, 45055813 - 45055699
Alignment:
Q  571 ttcgttgaacttgattcatgaacctaatgaatcgaacttgagtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactc 670  Q
    ||||||||||||| |||||||||| || ||  |||||||||| | || |||||| ||||||| |||||||||||||||| |  || |||| |||||||||    
T  45055813 ttcgttgaacttggttcatgaaccaaacgagccgaacttgagctaaagattaagttcgttaactaaatgagttgaacttgagttatatatagttcgactc 45055714  T
Q  671 gtttggttcatgaac 685  Q
    ||||| |||| ||||    
T  45055713 gtttgattcacgaac 45055699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 573 - 683
Target Start/End: Original strand, 48505850 - 48505960
Alignment:
Q  573 cgttgaacttgattcatgaacctaatgaatcgaacttgagtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgt 672  Q
    ||||||||||| ||||||||||||||||   | ||||||| | ||||||||| ||||||| |||||||| ||||||| | ||| |||| |||||||||||    
T  48505850 cgttgaacttggttcatgaacctaatgagctggacttgagctgaaaattaagttcgttaattaaatgagctgaacttgagctacatatagttcgactcgt 48505949  T
Q  673 ttggttcatga 683  Q
    | ||| |||||    
T  48505950 taggtacatga 48505960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 511 - 683
Target Start/End: Original strand, 27231539 - 27231711
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    |||||||||||||||||||||||| ||  |  | | | ||  |||||||| |||||||||||||| |||||||||||||| | | |||||  ||||||||    
T  27231539 tagggctgacaatgaaccgaaccagcttaattagagttcgtaattcgattcgataattgattcgtcgaacttgattcatgtatcaaatgagccgaacttg 27231638  T
Q  611 agtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatga 683  Q
    |  | ||||||||| |||| || ||| |||   |||||||| ||| || | ||| ||||||||||||||||||    
T  27231639 aactgaaaattaagttcgtcaactaattgaaccgaacttaagctatatgtagtttgactcgtttggttcatga 27231711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 570 - 649
Target Start/End: Original strand, 23237576 - 23237655
Alignment:
Q  570 attcgttgaacttgattcatgaacctaatgaatcgaacttgagtttaaaattaagctcgttaaataaatgagttgaactt 649  Q
    |||||||| ||||| |||||||||||||| |  |||||||||||| | ||||||| ||||||| ||||||||||||||||    
T  23237576 attcgttggacttggttcatgaacctaattagccgaacttgagttaagaattaagttcgttaattaaatgagttgaactt 23237655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 571 - 685
Target Start/End: Original strand, 40480110 - 40480225
Alignment:
Q  571 ttcgttgaacttgattcatgaacctaat-gaatcgaacttgagtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgact 669  Q
    ||||||||||||| |||||||||| ||  ||  |||||||||| | || |||||| ||||||| |||||||||||||||| |  || |||| ||||||||    
T  40480110 ttcgttgaacttggttcatgaaccaaaacgagccgaacttgagctaaagattaagttcgttaactaaatgagttgaacttgagttatatatagttcgact 40480209  T
Q  670 cgtttggttcatgaac 685  Q
    ||||||||||| ||||    
T  40480210 cgtttggttcacgaac 40480225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 572 - 643
Target Start/End: Complemental strand, 48634531 - 48634460
Alignment:
Q  572 tcgttgaacttgattcatgaacctaatgaatcgaacttgagtttaaaattaagctcgttaaataaatgagtt 643  Q
    |||||||||||| |||||||||| ||||| | ||||||||| | ||||||||| ||||||||||||||||||    
T  48634531 tcgttgaacttggttcatgaaccaaatgagttgaacttgagctaaaaattaagttcgttaaataaatgagtt 48634460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 522 - 683
Target Start/End: Complemental strand, 10619055 - 10618894
Alignment:
Q  522 atgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttgagtttaaaatt 621  Q
    |||||||||| |||||||| |||| |  |  | |||||| || |||| | |||||||||||| |||||||||  |||||   ||||||||| | ||||||    
T  10619055 atgaaccgaatcaactcgacaatagtttggaactcgattcgacaattaactcgttgaacttggttcatgaactaaatgagctgaacttgagctgaaaatt 10618956  T
Q  622 aagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatga 683  Q
    ||| |||||||||||||||| ||||||| | ||  |||| |||||||||  ||| |||||||    
T  10618955 aagttcgttaaataaatgagctgaacttgagctgtatatagttcgactctgttgcttcatga 10618894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 515 - 683
Target Start/End: Original strand, 3930720 - 3930888
Alignment:
Q  515 gctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttgagtt 614  Q
    |||| |||||||||||| ||||||||  ||| | ||| |||||| | ||||  | || ||||||||||| | ||||||||||| ||   | ||||||| |    
T  3930720 gctggcaatgaaccgaaacaactcgattatagttcgacattcgactcgatatctaatccgttgaacttggtccatgaacctaacgagctggacttgagct 3930819  T
Q  615 taaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatga 683  Q
     ||||||||| ||||||| |||||||| ||||||| | ||| |||| |||| ||||||| ||| |||||    
T  3930820 gaaaattaagttcgttaattaaatgagctgaacttgagctacatatagttcaactcgttaggtacatga 3930888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 511 - 683
Target Start/End: Original strand, 33171534 - 33171706
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    |||||||| |||||| |||||||||||||| |||| | ||| | |||||  || ||||   | ||||||||||||| ||||||| |||||   |||||||    
T  33171534 tagggctggcaatgatccgaaccaactcgataatagttcgaaactcgataagacaattatcttgttgaacttgatttatgaaccaaatgagctgaacttg 33171633  T
Q  611 agtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatga 683  Q
    || | ||||||||| || |||||||||||||  |||||| |  |  |||| ||| |||||| |||||||||||    
T  33171634 agctaaaaattaagttcattaaataaatgagccgaacttgagttgtatatagtttgactcggttggttcatga 33171706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 508 - 649
Target Start/End: Complemental strand, 17608857 - 17608719
Alignment:
Q  508 aactagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaac 607  Q
    ||||||||| |||||||||||||| |||||||| || | | ||  ||||||||    ||||||||||| ||||||| || ||||||| |||||  |||||    
T  17608857 aactagggccgacaatgaaccgaatcaactcgataaaagttcgtaattcgattc---aattgattcgtcgaacttggttgatgaaccaaatgagccgaac 17608761  T
Q  608 ttgagtttaaaattaagctcgttaaataaatgagttgaactt 649  Q
    ||||  | ||||||||| |||| || ||| ||||||||||||    
T  17608760 ttgatctgaaaattaagttcgtcaactaattgagttgaactt 17608719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 573 - 683
Target Start/End: Complemental strand, 26216355 - 26216245
Alignment:
Q  573 cgttgaacttgattcatgaacctaatgaatcgaacttgagtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgt 672  Q
    ||||||||||| || |||||||||| ||   | ||||||| | ||||||||| ||||||| |||| ||| ||||||| | ||| |||| |||||||||||    
T  26216355 cgttgaacttggtttatgaacctaacgagctggacttgagctgaaaattaagttcgttaattaaaggagctgaacttgagctacatatagttcgactcgt 26216256  T
Q  673 ttggttcatga 683  Q
    | |||||||||    
T  26216255 taggttcatga 26216245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 605 - 683
Target Start/End: Original strand, 2466611 - 2466689
Alignment:
Q  605 aacttgagtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatga 683  Q
    |||||||| | |||||| || |||||||||||||||| | ||||||||||| || |  ||||||||| |||||||||||    
T  2466611 aacttgagctgaaaatttagttcgttaaataaatgagctaaacttaaactatatgtaattcgactcgattggttcatga 2466689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 577 - 683
Target Start/End: Complemental strand, 10096550 - 10096444
Alignment:
Q  577 gaacttgattcatgaacctaatgaatcgaacttgagtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttgg 676  Q
    ||||||| |||||||||| ||||| | ||||||||     |||||||| ||| ||| |||||||| ||||||||||||| ||||  |||| ||||||||     
T  10096550 gaacttggttcatgaaccaaatgagttgaacttgaacgagaaattaagttcgctaactaaatgagctgaacttaaactacatataattcggctcgtttga 10096451  T
Q  677 ttcatga 683  Q
    |||||||    
T  10096450 ttcatga 10096444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 511 - 641
Target Start/End: Original strand, 23226999 - 23227129
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    ||||||||  ||||| |||||||||||||| |||| | ||| | |||||| || ||||   | |||||||||| | |||||| | |||||   |||||||    
T  23226999 tagggctggtaatgatccgaaccaactcgacaatagttcgaaactcgattcgacaattatcttgttgaacttggtacatgaatcaaatgagctgaacttg 23227098  T
Q  611 agtttaaaattaagctcgttaaataaatgag 641  Q
    || | ||||||||| ||||||||||||||||    
T  23227099 agctgaaaattaagttcgttaaataaatgag 23227129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 511 - 641
Target Start/End: Original strand, 23236152 - 23236282
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    ||||||||  ||||| |||||||||||||| |||| | ||| | |||||| || ||||   | |||||||||| | |||||| | |||||   |||||||    
T  23236152 tagggctggtaatgatccgaaccaactcgacaatagttcgaaactcgattcgacaattatcttgttgaacttggtacatgaatcaaatgagctgaacttg 23236251  T
Q  611 agtttaaaattaagctcgttaaataaatgag 641  Q
    || | ||||||||| ||||||||||||||||    
T  23236252 agctgaaaattaagttcgttaaataaatgag 23236282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 512 - 600
Target Start/End: Complemental strand, 41449884 - 41449796
Alignment:
Q  512 agggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatga 600  Q
    |||||||||||||| |||||||||||||| |||| | ||| | |||||| || ||||   |||||||||||| ||||||| || |||||    
T  41449884 agggctgacaatgatccgaaccaactcgacaatagttcgaaactcgattcgacaattatctcgttgaacttggttcatgatccaaatga 41449796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 585 - 683
Target Start/End: Complemental strand, 15434314 - 15434216
Alignment:
Q  585 ttcatgaacctaatgaatcgaacttgagtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatga 683  Q
    ||||||||||||| ||   | ||||||| | ||||||||| ||||||| |||||||| ||||||| | ||| || | |||||||||||| | |||||||    
T  15434314 ttcatgaacctaacgagctggacttgagctgaaaattaagttcgttaattaaatgagctgaacttgagctacatctagttcgactcgttagcttcatga 15434216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 511 - 540
Target Start/End: Original strand, 48505795 - 48505824
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcga 540  Q
    ||||||||||||||||||||||||||||||    
T  48505795 tagggctgacaatgaaccgaaccaactcga 48505824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 105; Significance: 5e-52; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 511 - 687
Target Start/End: Original strand, 3081718 - 3081894
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    |||||||| ||||||||||||||| |||||||||| | ||| | |||||| |||||||| ||||||||||||| |||| ||||| ||||| |||||||||    
T  3081718 tagggctggcaatgaaccgaaccagctcgaaaatagttcgatactcgattcgataattggttcgttgaacttggttcacgaaccaaatgagtcgaacttg 3081817  T
Q  611 agtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatgaacca 687  Q
    |||| ||||||||||||||||| |||||||| ||||||| |||||| ||| ||||||||||||||||||||||||||    
T  3081818 agttgaaaattaagctcgttaattaaatgagctgaacttgaactaagtatagttcgactcgtttggttcatgaacca 3081894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 103; E-Value: 8e-51
Query Start/End: Original strand, 510 - 689
Target Start/End: Complemental strand, 13312165 - 13311984
Alignment:
Q  510 ctagggctgacaatgaaccgaaccaactcgaaaataatgcgagat--tcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaac 607  Q
    ||||||||| |||||||||||||||||||||||||| | ||| ||  |||||| |||||||| ||| ||| ||||| |||||||||| ||||| ||||||    
T  13312165 ctagggctggcaatgaaccgaaccaactcgaaaatagttcgatatactcgattcgataattggttcattggacttggttcatgaaccaaatgagtcgaac 13312066  T
Q  608 ttgagtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatgaaccagc 689  Q
    ||||||| ||||||||| |||||||||||||||||||||||| |||| | |||||||| |||||||||||||||||||||||    
T  13312065 ttgagttgaaaattaagttcgttaaataaatgagttgaacttgaacttagtatggttcaactcgtttggttcatgaaccagc 13311984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 506 - 687
Target Start/End: Complemental strand, 7437449 - 7437268
Alignment:
Q  506 ctaactagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcga 605  Q
    |||| ||||||||  |||||||||||| |||||||||||| | ||| | |||||| |||||| | ||||||||||||| |||| ||||| ||||| ||||    
T  7437449 ctaattagggctggtaatgaaccgaactaactcgaaaatagttcgatactcgattcgataatgggttcgttgaacttggttcacgaaccaaatgagtcga 7437350  T
Q  606 acttgagtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatgaacca 687  Q
    |||| |||| |||||||||||||||||||||||||| ||||||| |||||| ||| ||||||||||||||||||||||||||    
T  7437349 actttagttgaaaattaagctcgttaaataaatgagctgaacttgaactaagtatagttcgactcgtttggttcatgaacca 7437268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 511 - 683
Target Start/End: Complemental strand, 1501988 - 1501816
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    |||||||||||||||||||||||||||||| |||  | ||| | ||||||||| |||| | |||||||||||  |||||||||| |||||| ||||||||    
T  1501988 tagggctgacaatgaaccgaaccaactcgacaattgttcgaaactcgatttgacaattaactcgttgaacttcgttcatgaaccaaatgaaccgaacttg 1501889  T
Q  611 agtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatga 683  Q
    || | ||||||||| ||||||||||||||||   ||||||| ||  |||| |||||||||| |||||||||||    
T  1501888 agctgaaaattaagttcgttaaataaatgagccaaacttaagctgtatatagttcgactcggttggttcatga 1501816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 517 - 687
Target Start/End: Complemental strand, 18099950 - 18099780
Alignment:
Q  517 tgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttgagttta 616  Q
    |||||||||||| |||||||||||||| | |  |||| |||||| |||||| ||||||||||||||| |||| ||||| ||||| ||||| ||||||| |    
T  18099950 tgacaatgaaccaaaccaactcgaaaaaagtttgagactcgattcgataatggattcgttgaacttggttcacgaaccaaatgagtcgaatttgagttaa 18099851  T
Q  617 aaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatgaacca 687  Q
     ||||||| |||||||||||||||| ||||||| | |||   || |||| | |||||||||||||||||||    
T  18099850 caattaagttcgttaaataaatgagatgaacttgagctatgcatagttcaattcgtttggttcatgaacca 18099780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 511 - 680
Target Start/End: Original strand, 5640252 - 5640421
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    |||||||| |||||||||||||||||||||  | | | ||  |||||||| |||||||||||||| ||||||| |||||||||| |||||  ||||||||    
T  5640252 tagggctggcaatgaaccgaaccaactcgattagagttcgtaattcgattcgataattgattcgtcgaacttggttcatgaaccaaatgagccgaacttg 5640351  T
Q  611 agtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttca 680  Q
    |  | ||||||||| |||| || ||| |||| ||||||| ||||| |||| |||||||||||||||||||    
T  5640352 aactgaaaattaagttcgtcaactaattgagctgaacttgaactatatatagttcgactcgtttggttca 5640421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 510 - 641
Target Start/End: Complemental strand, 17441299 - 17441168
Alignment:
Q  510 ctagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaactt 609  Q
    |||||| || ||||||||||||||||| |||||||| | ||| | |||||||| ||||| |||||||||||||  |||||||||| ||||| | ||||||    
T  17441299 ctagggttggcaatgaaccgaaccaacccgaaaatagttcgaaactcgatttggtaattaattcgttgaacttagttcatgaaccaaatgagttgaactt 17441200  T
Q  610 gagtttaaaattaagctcgttaaataaatgag 641  Q
    ||||| |||||||||||||| |||||||||||    
T  17441199 gagttgaaaattaagctcgtcaaataaatgag 17441168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 517 - 649
Target Start/End: Complemental strand, 18095653 - 18095521
Alignment:
Q  517 tgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttgagttta 616  Q
    |||||||||||| ||||||||| |||| | |  |||| |||||| |||||| ||||||||||||||| |||| ||||| ||| | ||||||||||||| |    
T  18095653 tgacaatgaaccaaaccaactcaaaaaaagtttgagactcgattcgataatggattcgttgaacttggttcacgaaccaaataagtcgaacttgagttaa 18095554  T
Q  617 aaattaagctcgttaaataaatgagttgaactt 649  Q
    |||||||| |||||||||||||||| |||||||    
T  18095553 aaattaagttcgttaaataaatgagatgaactt 18095521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 511 - 680
Target Start/End: Original strand, 10961796 - 10961965
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    |||||||| |||||||||||||||||||||  | | |  |  ||| |||| || ||||||||||||||||||| |||||||||| ||||| ||||| |||    
T  10961796 tagggctggcaatgaaccgaaccaactcgattaaagtttgtaatttgattcgacaattgattcgttgaacttggttcatgaaccaaatgagtcgaatttg 10961895  T
Q  611 agtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttca 680  Q
    || | ||||||||| |||| || ||| |||| ||||||| ||||| || | |||||||||||||||||||    
T  10961896 agctgaaaattaagttcgtcaactaattgagctgaacttgaactatatgtagttcgactcgtttggttca 10961965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 511 - 683
Target Start/End: Original strand, 4441301 - 4441473
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    |||||| | ||||||||||||||||||||| |||| | ||| | |||||| || ||||   |||||||||||| |||| ||||  |||||   |||||||    
T  4441301 tagggccggcaatgaaccgaaccaactcgacaatagttcgaaactcgattcgacaattagctcgttgaacttggttcacgaactaaatgagctgaacttg 4441400  T
Q  611 agtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatga 683  Q
    |||| ||||||||| |||||||||||||||| ||||||| ||||  |||| |||||| ||| |||||||||||    
T  4441401 agttgaaaattaagttcgttaaataaatgagctgaacttgaactgtatatagttcgattcggttggttcatga 4441473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 511 - 683
Target Start/End: Complemental strand, 6999407 - 6999235
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    |||||| |||||| || |||| |||||||| |||| |  |||| |||||| ||||||| |||||||||||||| || ||||||  |||||   |||||||    
T  6999407 tagggcagacaataaatcgaagcaactcgacaatagtttgagactcgattcgataattaattcgttgaacttggttaatgaactaaatgagctgaacttg 6999308  T
Q  611 agtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatga 683  Q
    || | ||||||||| | |||||| ||||||  ||||||| ||||  |||| |||||||||| |||||||||||    
T  6999307 agctgaaaattaagtttgttaaacaaatgaactgaacttgaactttatatagttcgactcggttggttcatga 6999235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 510 - 683
Target Start/End: Complemental strand, 8200772 - 8200610
Alignment:
Q  510 ctagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaactt 609  Q
    ||||||||||||||||||| |||||||||||  ||| | ||| |||||| | |||| || || |||||||||||||||||||||||||                
T  8200772 ctagggctgacaatgaaccaaaccaactcgattatagttcgacattcgactcgatatttaatccgttgaacttgattcatgaacctaa-----------c 8200684  T
Q  610 gagtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatga 683  Q
    ||| | ||||||||| ||||||| |||||||||||||||| | ||| |||| |||||||||||| |||||||||    
T  8200683 gagctgaaaattaagttcgttaattaaatgagttgaacttgagctacatatagttcgactcgttaggttcatga 8200610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 509 - 683
Target Start/End: Complemental strand, 10346863 - 10346689
Alignment:
Q  509 actagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaact 608  Q
    |||||||||| ||||||||| |||||| ||||  ||| | ||| |||||| |  |||  | || ||||||||||| ||||||||||||| ||   | |||    
T  10346863 actagggctggcaatgaaccaaaccaaatcgattatagttcgacattcgactctatatctaatccgttgaacttggttcatgaacctaacgagctggact 10346764  T
Q  609 tgagtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatga 683  Q
    |||| | ||||||||| ||||||| |||||||| ||||||| |  || |||| ||||||||||||  ||||||||    
T  10346763 tgagctgaaaattaagttcgttaattaaatgagctgaacttgagttacatatagttcgactcgttaagttcatga 10346689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 571 - 685
Target Start/End: Complemental strand, 33110538 - 33110424
Alignment:
Q  571 ttcgttgaacttgattcatgaacctaatgaatcgaacttgagtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactc 670  Q
    ||||||||||||| |||||||||| || ||  ||||||| || | || |||||| ||||||| ||||||||| |||||| |  || |||| |||||||||    
T  33110538 ttcgttgaacttggttcatgaaccaaacgagccgaacttaagctaaagattaagttcgttaactaaatgagtcgaacttgagttatatatagttcgactc 33110439  T
Q  671 gtttggttcatgaac 685  Q
    |||||||||| ||||    
T  33110438 gtttggttcacgaac 33110424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 568 - 680
Target Start/End: Original strand, 9950817 - 9950929
Alignment:
Q  568 tgattcgttgaacttgattcatgaacctaatgaatcgaacttgagtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcga 667  Q
    |||||| | ||||||| |||||||||| |||||  |||||||||||| ||||||||| |||| || ||| |||| ||||||| | ||| || | |||| |    
T  9950817 tgattcatcgaacttggttcatgaaccaaatgagccgaacttgagttgaaaattaagttcgtcaactaattgagctgaacttgagctatatgtagttcaa 9950916  T
Q  668 ctcgtttggttca 680  Q
    |||||||||||||    
T  9950917 ctcgtttggttca 9950929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 511 - 683
Target Start/End: Original strand, 11460014 - 11460178
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    ||||| || ||||||||||| ||||||| | |||| | ||  | |||||| |||||||||||||||||||||| |||||||||| ||||        |||    
T  11460014 tagggttggcaatgaaccgatccaactcaataatagttcggaactcgattcgataattgattcgttgaacttggttcatgaaccaaatg--------ttg 11460105  T
Q  611 agtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatga 683  Q
    || | | ||||||| | |||||||||||||| ||||||| |  | ||||| |||||||||| |||||| ||||    
T  11460106 agctgagaattaagtttgttaaataaatgagctgaacttgagttgaatatagttcgactcggttggtttatga 11460178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 565 - 680
Target Start/End: Original strand, 27984944 - 27985059
Alignment:
Q  565 aattgattcgttgaacttgattcatgaacctaatgaatcgaacttgagtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggtt 664  Q
    ||||||||||| ||||||| || ||||||| |||||  |||||||||  | ||||||||| | || || ||| |||| ||||||| ||||| || | |||    
T  27984944 aattgattcgtcgaacttggtttatgaaccaaatgagccgaacttgaactgaaaattaagtttgtaaactaattgagctgaacttgaactagatgtagtt 27985043  T
Q  665 cgactcgtttggttca 680  Q
    |||||||||| |||||    
T  27985044 cgactcgtttagttca 27985059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 588 - 683
Target Start/End: Complemental strand, 30774101 - 30774006
Alignment:
Q  588 atgaacctaatgaatcgaacttgagtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatga 683  Q
    ||||||| ||||| || || ||||||| || ||||||| ||||||||||||||| ||||||||| |||  |||  | |||||| ||||||||||||    
T  30774101 atgaaccaaatgagtcaaatttgagttgaatattaagcacgttaaataaatgagatgaacttaagctatgtataatccgactcatttggttcatga 30774006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 608 - 687
Target Start/End: Original strand, 2962799 - 2962878
Alignment:
Q  608 ttgagtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatgaacca 687  Q
    ||||||| ||||||||| | ||||||||||||||   |||||||||||  |||  ||| ||||||||| |||||||||||    
T  2962799 ttgagttgaaaattaagttagttaaataaatgagccaaacttaaactatgtataattcaactcgtttgattcatgaacca 2962878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 578 - 685
Target Start/End: Complemental strand, 22295989 - 22295882
Alignment:
Q  578 aacttgattcatgaacctaatgaatcgaacttgagtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggt 677  Q
    |||||| |||||||||| || ||  |||||||||| | || |||||| ||||||| |||||| |||||| || |  || |||| |||| |||| ||||||    
T  22295989 aacttggttcatgaaccaaacgagccgaacttgagctaaagattaagttcgttaagtaaatgtgttgaatttgagttatatatagttcaactcttttggt 22295890  T
Q  678 tcatgaac 685  Q
    ||||||||    
T  22295889 tcatgaac 22295882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 574 - 641
Target Start/End: Complemental strand, 32163618 - 32163551
Alignment:
Q  574 gttgaacttgattcatgaacctaatgaatcgaacttgagtttaaaattaagctcgttaaataaatgag 641  Q
    ||||||| || ||||||||||||||||    |||||||||| ||||||||| ||||||| ||||||||    
T  32163618 gttgaacatggttcatgaacctaatgagctaaacttgagttgaaaattaagttcgttaactaaatgag 32163551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 626 - 683
Target Start/End: Original strand, 17071224 - 17071281
Alignment:
Q  626 tcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatga 683  Q
    ||||||| ||||||||||||||| ||  || |||||||| |||| |||||||||||||    
T  17071224 tcgttaactaaatgagttgaactaaagttatatatggtttgacttgtttggttcatga 17071281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 102; Significance: 3e-50; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 510 - 687
Target Start/End: Complemental strand, 40459062 - 40458885
Alignment:
Q  510 ctagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaactt 609  Q
    |||||||||||||||||||||||||||| ||||||| |  || | ||||||  ||||||| || |||||||||| |||| ||||| ||||| ||||||||    
T  40459062 ctagggctgacaatgaaccgaaccaacttgaaaatagtttgatactcgattcaataattggtttgttgaacttggttcacgaaccaaatgagtcgaactt 40458963  T
Q  610 gagtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatgaacca 687  Q
    ||||| |||||||||||||||||||||||||| ||||||| |||||| ||| ||||||||||||||||||||||||||    
T  40458962 gagttgaaaattaagctcgttaaataaatgagctgaacttgaactaagtatagttcgactcgtttggttcatgaacca 40458885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 514 - 681
Target Start/End: Original strand, 11006977 - 11007142
Alignment:
Q  514 ggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttgagt 613  Q
    |||||||||||||||||||||||||||||||| |  ||   |||||  |||||||||||||||||||||| |||| ||||| ||||| ||||||||||||    
T  11006977 ggctgacaatgaaccgaaccaactcgaaaatagtttgac--tcgatccgataattgattcgttgaacttggttcacgaaccaaatgagtcgaacttgagt 11007074  T
Q  614 ttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcat 681  Q
    | |||||||||||||||||||||||||||||||||| || ||| |||  |||||||||||||||||||    
T  11007075 tgaaaattaagctcgttaaataaatgagttgaacttgaaataagtataattcgactcgtttggttcat 11007142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 511 - 678
Target Start/End: Complemental strand, 13830018 - 13829851
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    ||||||||||| ||| |||||| ||||| |||||||   || | |||||| |||||||||||||||||||||| ||||| |||| ||||| | |||||||    
T  13830018 tagggctgacattgagccgaacaaactcaaaaataacttgataatcgattcgataattgattcgttgaacttggttcataaaccaaatgagttgaacttg 13829919  T
Q  611 agtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggtt 678  Q
    |||| |||||||| |||||||| |||||||||||||||| || | | |||||||||||||||||||||    
T  13829918 agttaaaaattaaactcgttaattaaatgagttgaacttgaattgagtatggttcgactcgtttggtt 13829851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 528 - 682
Target Start/End: Original strand, 32713013 - 32713168
Alignment:
Q  528 cgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaa-cttgattcatgaacctaatgaatcgaacttgagtttaaaattaagct 626  Q
    ||||| |||||||||||||  | | |||| ||||||||| |||||||||||| ||||||||||||||| ||||| |||||| |  ||| |||||||||||    
T  32713013 cgaacaaactcgaaaataactcaatattcaatttgataaatgattcgttgaaacttgattcatgaaccaaatgagtcgaacatatgttgaaaattaagct 32713112  T
Q  627 cgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatg 682  Q
    |||||||||||| | ||||||||||||| | |||||||||||||||||| ||||||    
T  32713113 cgttaaataaataatttgaacttaaactgagtatggttcgactcgtttgattcatg 32713168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 511 - 649
Target Start/End: Original strand, 27464572 - 27464710
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    ||||||||||||||||||||||||||||||||||| | ||||| | |||| ||||||||||| |||||| ||| |||||||||| ||||| |||||||||    
T  27464572 tagggctgacaatgaaccgaaccaactcgaaaatagttcgagacttgattcgataattgatttgttgaatttggttcatgaaccaaatgagtcgaacttg 27464671  T
Q  611 agtttaaaattaagctcgttaaataaatgagttgaactt 649  Q
    | || ||||||||| ||  |||||||| |||||| ||||    
T  27464672 aattgaaaattaagttccctaaataaaggagttggactt 27464710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 510 - 683
Target Start/End: Original strand, 3409187 - 3409360
Alignment:
Q  510 ctagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaactt 609  Q
    ||||||||| ||||||||||||||||||||| |||| | ||| | |||||| || |||| | |||||||||||| |||||||||| ||||||  ||||||    
T  3409187 ctagggctggcaatgaaccgaaccaactcgacaatagttcgaaactcgattcgacaattaactcgttgaacttggttcatgaaccaaatgaactgaactt 3409286  T
Q  610 gagtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatga 683  Q
    ||| | ||||||||| |||||||||||||||| |||| || | ||  |||| |||||||||| ||| |||||||    
T  3409287 gagctgaaaattaagttcgttaaataaatgagctgaatttgagctgtatatagttcgactcgattgattcatga 3409360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 565 - 689
Target Start/End: Complemental strand, 1094543 - 1094419
Alignment:
Q  565 aattgattcgttgaacttgattcatgaacctaatgaatcgaacttgagtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggtt 664  Q
    |||||| || ||||| ||| |||||||||| ||||| ||||||||||||| ||||||||||||||| ||||||||||| |||||| |  | | |||||||    
T  1094543 aattgactcattgaatttggttcatgaaccaaatgagtcgaacttgagttgaaaattaagctcgttgaataaatgagtcgaacttgagttgagtatggtt 1094444  T
Q  665 cgactcgtttggttcatgaaccagc 689  Q
    |||||||||||| ||||||||||||    
T  1094443 cgactcgtttggatcatgaaccagc 1094419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 514 - 683
Target Start/End: Complemental strand, 10412577 - 10412408
Alignment:
Q  514 ggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttgagt 613  Q
    |||||| |||||||| |||||||||||||||| | |||||||||||| | |||||  |||||| || | | ||| | |||   |||| ||||||||||||    
T  10412577 ggctgataatgaaccaaaccaactcgaaaatagttcgagattcgattcggtaattagttcgttaaattcggttcgtaaactagatgagtcgaacttgagt 10412478  T
Q  614 ttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatga 683  Q
    | ||||||||||||||||||||||||||||| |||| | ||| ||||  | |||||| ||||||||||||    
T  10412477 taaaaattaagctcgttaaataaatgagttggacttgagctatatataatccgactcatttggttcatga 10412408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 511 - 683
Target Start/End: Complemental strand, 36538796 - 36538624
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    |||||||||||||||||| |||||||||||  ||| | ||| |||||| | ||||  | || ||||||||||| ||||||||||||| || | | |||||    
T  36538796 tagggctgacaatgaaccaaaccaactcgattatagttcgacattcgactcgatatctaatccgttgaacttggttcatgaacctaacgagttggacttg 36538697  T
Q  611 agtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatga 683  Q
    || | ||||||||| ||||||| |||||||| | ||||| | ||| |||| |||||||||||| |||||||||    
T  36538696 agctgaaaattaagttcgttaattaaatgagctaaacttgagctacatatagttcgactcgttaggttcatga 36538624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 511 - 683
Target Start/End: Complemental strand, 41959283 - 41959111
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    ||||||||||||||||||||| ||||||||  ||| | ||| |||||| | ||||  | || ||||||||||||||||||||||||| ||   | |||||    
T  41959283 tagggctgacaatgaaccgaatcaactcgattatagttcgacattcgactcgatatctaatccgttgaacttgattcatgaacctaacgagctggacttg 41959184  T
Q  611 agtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatga 683  Q
    || | ||||||||| ||||||| |||||||| ||||| ||| ||| |||| |||||||||||| |||| ||||    
T  41959183 agctgaaaattaagttcgttaattaaatgagctgaacataagctacatatagttcgactcgttaggttaatga 41959111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 511 - 682
Target Start/End: Original strand, 34116173 - 34116344
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    ||||| || |||||| ||||||||||||||  | | | ||  ||||||||| |||||||||| || ||||||  |||||||||| |||||  ||||||||    
T  34116173 taggggtggcaatgagccgaaccaactcgattagagttcgtaattcgatttaataattgatttgtcgaacttagttcatgaaccaaatgagccgaacttg 34116272  T
Q  611 agtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatg 682  Q
    || ||||||||||| ||| ||||||| |||| ||||||| | ||| || | |||||||||||||||||||||    
T  34116273 agcttaaaattaagttcgctaaataattgagctgaacttgagctatatgtagttcgactcgtttggttcatg 34116344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 510 - 683
Target Start/End: Complemental strand, 27634812 - 27634639
Alignment:
Q  510 ctagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaactt 609  Q
    ||||||||| |||||||||||||||||||||  ||| | ||| |||||| | |||| || || ||||||||||  ||||||||||||| ||   | ||||    
T  27634812 ctagggctggcaatgaaccgaaccaactcgattatagttcgacattcgactcgatatttaatccgttgaacttagttcatgaacctaacgagctggactt 27634713  T
Q  610 gagtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatga 683  Q
    ||| | ||||||||| ||||||| |||||||| ||||||| | ||| |||| ||| |||||||| |||||||||    
T  27634712 gagctgaaaattaagttcgttaattaaatgagctgaacttgagctacatatagtttgactcgttaggttcatga 27634639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 511 - 683
Target Start/End: Complemental strand, 33831635 - 33831463
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    |||||||| |||||||||||||||||||||  ||| | ||| |||||| | ||||  | || ||||||| ||| ||||||||||||| ||   | |||||    
T  33831635 tagggctggcaatgaaccgaaccaactcgattatagttcgacattcgactcgatatctaatccgttgaatttggttcatgaacctaacgagctggacttg 33831536  T
Q  611 agtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatga 683  Q
    || | ||||||||| ||||||| |||||||| ||||||| | ||| |||| |||||||||||| |||||||||    
T  33831535 agctgaaaattaagttcgttaattaaatgagctgaacttgagctacatatagttcgactcgttaggttcatga 33831463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 520 - 683
Target Start/End: Complemental strand, 26436484 - 26436322
Alignment:
Q  520 caatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttgagtttaaaa 619  Q
    |||||||||||||||||||||  |||||  || |||||| | |||| || || ||||||||||| ||||||||||||| ||   |||| |||| | ||||    
T  26436484 caatgaaccgaaccaactcgattataatt-gacattcgactcgatatttaatccgttgaacttggttcatgaacctaacgagctgaacgtgagctgaaaa 26436386  T
Q  620 ttaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatga 683  Q
    ||||| ||||||| |||||||| ||||||| | ||| |||| |||||||||||| |||||||||    
T  26436385 ttaagttcgttaattaaatgagctgaacttgagctacatatagttcgactcgttaggttcatga 26436322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 510 - 680
Target Start/End: Complemental strand, 11028049 - 11027879
Alignment:
Q  510 ctagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaactt 609  Q
    ||||||||| ||||||||||||||||||| |  | | | ||  |||| ||| |||||||||||||| ||||||| |||||||||| |||||  |||||||    
T  11028049 ctagggctggcaatgaaccgaaccaactcaattagagttcgtaattcaattcgataattgattcgtcgaacttggttcatgaaccaaatgagccgaactt 11027950  T
Q  610 gagtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttca 680  Q
    ||  | ||||||||| |||| || ||| |||| ||||||| | ||| || | |||||||||||||||||||    
T  11027949 gaactaaaaattaagttcgtcaactaattgagctgaacttgagctatatgtagttcgactcgtttggttca 11027879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 564 - 681
Target Start/End: Original strand, 12070567 - 12070684
Alignment:
Q  564 taattgattcgttgaacttgattcatgaacctaatgaatcgaacttgagtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggt 663  Q
    ||||| |||||||||| ||||||| | |||  ||||||||||||||||||| ||||||||  |||||||| |||| |||| |||||||||||  ||| ||    
T  12070567 taattaattcgttgaatttgattcgtcaactaaatgaatcgaacttgagttgaaaattaaattcgttaaacaaataagttaaacttaaactatgtatagt 12070666  T
Q  664 tcgactcgtttggttcat 681  Q
    |||||||||||| |||||    
T  12070667 tcgactcgtttgcttcat 12070684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 511 - 680
Target Start/End: Original strand, 27902439 - 27902607
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    ||||||||||| ||||||||||||||||||  | | | ||  | |||||| || ||||||||||| ||||||| |||||||||  |||||| ||||||||    
T  27902439 tagggctgacattgaaccgaaccaactcgattaaagttcgtaaatcgattcgacaattgattcgtcgaacttggttcatgaacaaaatgaaccgaacttg 27902538  T
Q  611 agtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttca 680  Q
    || | ||||||||  |||| || ||| |||||||||||| | ||| || | |||||||||||||||||||    
T  27902539 agctgaaaattaa-atcgtcaactaattgagttgaacttgagctatatgtagttcgactcgtttggttca 27902607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 511 - 689
Target Start/End: Complemental strand, 29807046 - 29806879
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    |||||||| |||||||||||||||| ||||||||| | | ||| |||||| |||||||||||||||||||||| || | ||||| |||||  |||||       
T  29807046 tagggctggcaatgaaccgaaccaattcgaaaatagttcaagactcgattcgataattgattcgttgaacttggtttacgaaccaaatgagccgaac--- 29806950  T
Q  611 agtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatgaaccagc 689  Q
            | ||| | ||||||||||||||||||||||| | ||   |||||||||||||||| |||||||||||||||    
T  29806949 --------actaaacccgttaaataaatgagttgaacttgagcttcgtatggttcgactcgttaggttcatgaaccagc 29806879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 512 - 678
Target Start/End: Complemental strand, 30713295 - 30713129
Alignment:
Q  512 agggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttga 611  Q
    ||||||| |||||||||||||||||||||  |   | ||  |||||||| |||||||||||||| ||||||| |||||||||| |||||  ||||| |||    
T  30713295 agggctggcaatgaaccgaaccaactcgattagtgttcgtaattcgattcgataattgattcgtcgaacttggttcatgaaccaaatgagccgaacatga 30713196  T
Q  612 gtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggtt 678  Q
    | | ||| ||||| |||| || ||| |||||||||||| | ||| ||   |||||||||||||||||    
T  30713195 gctgaaatttaagttcgtcaactaattgagttgaacttgagctatatgcagttcgactcgtttggtt 30713129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 571 - 680
Target Start/End: Original strand, 2647034 - 2647143
Alignment:
Q  571 ttcgttgaacttgattcatgaacctaatgaatcgaacttgagtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactc 670  Q
    ||||||||||||| |||||||||| || ||  |||||||||| | ||||||||| ||||||| ||||| |||||||||| |  || |||| |||||||||    
T  2647034 ttcgttgaacttggttcatgaaccaaacgagccgaacttgagctaaaaattaagttcgttaactaaataagttgaacttgagttatatatagttcgactc 2647133  T
Q  671 gtttggttca 680  Q
    ||||||||||    
T  2647134 gtttggttca 2647143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 514 - 671
Target Start/End: Original strand, 44740486 - 44740643
Alignment:
Q  514 ggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttgagt 613  Q
    ||||| ||||||||||||||||||||| |||| |  | || |||||| || |||| | |||||||||||| |||||||||| || ||   |||||||||     
T  44740486 ggctggcaatgaaccgaaccaactcgacaatagtttgggactcgattcgacaattaactcgttgaacttggttcatgaaccaaacgagctgaacttgagc 44740585  T
Q  614 ttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcg 671  Q
    | ||||||||| |||||||| ||||||| ||||||| | ||  |||| ||||||||||    
T  44740586 taaaaattaagttcgttaaacaaatgagctgaacttgagctttatatagttcgactcg 44740643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 553 - 680
Target Start/End: Original strand, 38409613 - 38409740
Alignment:
Q  553 attcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttgagtttaaaattaagctcgttaaataaatgagttgaacttaaa 652  Q
    |||||||| || ||||||||||| ||| ||| |||||||||| |||||  |||||||||| | ||||||||| | || || ||| |||| ||||||| ||    
T  38409613 attcgattcgacaattgattcgtcgaatttggttcatgaaccaaatgagccgaacttgagctgaaaattaagtttgtgaactaattgagctgaactttaa 38409712  T
Q  653 ctaaatatggttcgactcgtttggttca 680  Q
    ||| |||| ||||| |||||||||||||    
T  38409713 ctatatatagttcggctcgtttggttca 38409740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 574 - 683
Target Start/End: Complemental strand, 2578156 - 2578047
Alignment:
Q  574 gttgaacttgattcatgaacctaatgaatcgaacttgagtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtt 673  Q
    ||||||||||||||||||| | |||||   ||||||||| | ||||||||  |||||||||||||||||| ||||||| ||| |||| | |||||||| |    
T  2578156 gttgaacttgattcatgaatcaaatgagctgaacttgagctgaaaattaaattcgttaaataaatgagttaaacttaagctatatatcgatcgactcggt 2578057  T
Q  674 tggttcatga 683  Q
    || |||||||    
T  2578056 tgattcatga 2578047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 555 - 687
Target Start/End: Original strand, 2328335 - 2328467
Alignment:
Q  555 tcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttgagtttaaaattaagctcgttaaataaatgagttgaacttaaact 654  Q
    |||||| | ||||| ||||||| ||||| ||||||||    ||||| || |||||||||| |||||||| | | | ||||||||||||||||||| || |    
T  2328335 tcgattcggtaattaattcgttaaactttattcatgatttaaatgagtcaaacttgagttgaaaattaaacccttcaaataaatgagttgaacttgaatt 2328434  T
Q  655 aaatatggttcgactcgtttggttcatgaacca 687  Q
    | |||| ||||||||||| || |||||||||||    
T  2328435 atatatagttcgactcgtgtgattcatgaacca 2328467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 515 - 651
Target Start/End: Original strand, 24844670 - 24844806
Alignment:
Q  515 gctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttgagtt 614  Q
    ||||||||||| |||||||||||||| |||| | ||| | |||||| |  ||||   |||||||||||| |||||||||| |||||   ||||||||| |    
T  24844670 gctgacaatgatccgaaccaactcgataatagttcgaaactcgattcggcaattatctcgttgaacttggttcatgaaccaaatgagctgaacttgagct 24844769  T
Q  615 taaaattaagctcgttaaataaatgagttgaacttaa 651  Q
     ||||||||  ||| |||||||||||| |||||||||    
T  24844770 gaaaattaaattcgataaataaatgagctgaacttaa 24844806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 511 - 641
Target Start/End: Complemental strand, 16544146 - 16544016
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    |||| |||||||||||||||| ||||||| ||| | | | ||| |||||| ||||||  ||| |||||||||| ||||  |||| ||| | | ||| |||    
T  16544146 taggactgacaatgaaccgaagcaactcggaaaaagttcaagactcgattcgataatgtatttgttgaacttggttcaccaaccaaataatttgaatttg 16544047  T
Q  611 agtttaaaattaagctcgttaaataaatgag 641  Q
    |||| ||||||||| ||||||||||||||||    
T  16544046 agttaaaaattaagttcgttaaataaatgag 16544016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 573 - 683
Target Start/End: Complemental strand, 34064783 - 34064673
Alignment:
Q  573 cgttgaacttgattcatgaacctaatgaatcgaacttgagtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgt 672  Q
    ||||||||||  ||||||||||||| ||   | ||||||| | ||||||||| ||||||| |||||||| ||||||| | ||| |||| |||||||||||    
T  34064783 cgttgaacttagttcatgaacctaacgagctggacttgagctgaaaattaagttcgttaattaaatgagctgaacttgagctacatatagttcgactcgt 34064684  T
Q  673 ttggttcatga 683  Q
    | |||||||||    
T  34064683 taggttcatga 34064673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 521 - 674
Target Start/End: Complemental strand, 17616397 - 17616244
Alignment:
Q  521 aatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttgagtttaaaat 620  Q
    |||||| |||||||||||||||||| |  || | |||||| || ||||   |||||||| ||||| |||||||| |||||  |||||||||| | |||||    
T  17616397 aatgaatcgaaccaactcgaaaatagttagaaactcgattcgacaattatctcgttgaatttgatacatgaaccaaatgagccgaacttgagctaaaaat 17616298  T
Q  621 taagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgttt 674  Q
    |||| || |||| |||| |||| |||| || | || ||||  ||||||||||||    
T  17616297 taagttcattaactaaacgagtggaacatagattatatataattcgactcgttt 17616244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 605 - 683
Target Start/End: Complemental strand, 39690216 - 39690138
Alignment:
Q  605 aacttgagtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatga 683  Q
    |||||||| | ||||||||| |||| || ||| |||||||||||| | ||| || | ||||||||||||||||||||||    
T  39690216 aacttgagctgaaaattaagttcgtcaactaattgagttgaacttgagctatatgtagttcgactcgtttggttcatga 39690138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 550 - 611
Target Start/End: Complemental strand, 31000941 - 31000880
Alignment:
Q  550 gagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttga 611  Q
    ||||||||||| | ||||| ||||| ||||||||||||||||||| ||||| | ||||||||    
T  31000941 gagattcgattcggtaattaattcgatgaacttgattcatgaaccaaatgatttgaacttga 31000880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 563 - 683
Target Start/End: Complemental strand, 14103355 - 14103235
Alignment:
Q  563 ataattgattcgttgaacttgattcatgaacctaatgaatcgaacttgagtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatgg 662  Q
    |||||| | ||||| |||||| ||||||| || ||| | |||||||| |  | ||||||||| ||||||| ||||||||  |||||||||||| ||||      
T  14103355 ataattaactcgtttaacttggttcatgagccaaataagtcgaacttaaactgaaaattaagttcgttaattaaatgagcagaacttaaactatatatat 14103256  T
Q  663 ttcgactcgtttggttcatga 683  Q
    ||||| || |||| |||||||    
T  14103255 ttcgattcatttgattcatga 14103235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 521 - 641
Target Start/End: Original strand, 33163990 - 33164110
Alignment:
Q  521 aatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttgagtttaaaat 620  Q
    ||||||||||||||| ||||  ||| | ||| |||||| | ||||  | || ||||||||||| ||||||||||||| ||   | ||||||| | |||||    
T  33163990 aatgaaccgaaccaattcgattatagttcgacattcgactcgatatctaatccgttgaacttggttcatgaacctaacgagctggacttgagctgaaaat 33164089  T
Q  621 taagctcgttaaataaatgag 641  Q
    |||| ||||||| ||||||||    
T  33164090 taagttcgttaattaaatgag 33164110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 626 - 681
Target Start/End: Complemental strand, 18667776 - 18667721
Alignment:
Q  626 tcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcat 681  Q
    ||||||||||||| |||||||||| |  || |||| ||||||||||||||||||||    
T  18667776 tcgttaaataaataagttgaacttgagttatatatagttcgactcgtttggttcat 18667721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 511 - 622
Target Start/End: Original strand, 20203714 - 20203825
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    |||||||  |||| ||||||||||||||||  | | | ||  ||||||||  | ||||||||||||||||||| |||||||||| ||||| || ||| ||    
T  20203714 tagggctagcaattaaccgaaccaactcgattaaagttcgtaattcgattcaacaattgattcgttgaacttggttcatgaaccaaatgagtcaaacctg 20203813  T
Q  611 agtttaaaatta 622  Q
    || | |||||||    
T  20203814 agctgaaaatta 20203825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 511 - 626
Target Start/End: Complemental strand, 28968960 - 28968845
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    |||||||||||||||||| || |||| ||| |||| |  |||| |||||| ||||||| | |||||||| |   ||| |||||| ||||| || || |||    
T  28968960 tagggctgacaatgaaccaaatcaacccgagaatagtttgagactcgattcgataattaactcgttgaattcagttcgtgaaccaaatgagtcaaatttg 28968861  T
Q  611 agtttaaaattaagct 626  Q
    |||| |||||||||||    
T  28968860 agttgaaaattaagct 28968845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 508 - 579
Target Start/End: Complemental strand, 40680352 - 40680281
Alignment:
Q  508 aactagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaa 579  Q
    ||||||| ||| ||||||||||||||||||| | |||| | ||  |||||||| ||||||||| ||||||||    
T  40680352 aactaggactggcaatgaaccgaaccaactcaataatagttcggaattcgattcgataattgactcgttgaa 40680281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 520 - 639
Target Start/End: Complemental strand, 41332362 - 41332243
Alignment:
Q  520 caatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttgagtttaaaa 619  Q
    ||||||||| |||||||||||| ||| | ||| | |||||| || |||| | | |||||||||| ||||| |||| | ||| | ||| ||||| | ||||    
T  41332362 caatgaaccaaaccaactcgaatatagttcgaaactcgattcgacaattaacttgttgaacttggttcataaaccaattgagttgaatttgagctgaaaa 41332263  T
Q  620 ttaagctcgttaaataaatg 639  Q
    ||||| | ||||||||||||    
T  41332262 ttaagtttgttaaataaatg 41332243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 626 - 681
Target Start/End: Complemental strand, 44935792 - 44935737
Alignment:
Q  626 tcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcat 681  Q
    ||||||| |||||||| |||||||||| || |||| ||| ||||||||||||||||    
T  44935792 tcgttaactaaatgagctgaacttaaattatatatagtttgactcgtttggttcat 44935737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 519 - 600
Target Start/End: Complemental strand, 9753238 - 9753157
Alignment:
Q  519 acaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatga 600  Q
    |||||||||||| |||| ||||| | | | |||||||||||| || |||||||||||| |  ||| |||||||||| |||||    
T  9753238 acaatgaaccgagccaagtcgaacaaagttcgagattcgattcgacaattgattcgttaagtttggttcatgaaccaaatga 9753157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 572 - 637
Target Start/End: Complemental strand, 17503502 - 17503437
Alignment:
Q  572 tcgttgaacttgattcatgaacctaatgaatcgaacttgagtttaaaattaagctcgttaaataaa 637  Q
    |||||||||||| ||||| || | ||||||||||| ||||||| ||||||||| | ||||| ||||    
T  17503502 tcgttgaacttggttcattaaacaaatgaatcgaatttgagttgaaaattaagtttgttaactaaa 17503437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 626 - 683
Target Start/End: Complemental strand, 33831452 - 33831395
Alignment:
Q  626 tcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatga 683  Q
    ||||||| |||||||| ||||||| | ||| |||| |||||||||||| |||||||||    
T  33831452 tcgttaattaaatgagctgaacttgagctacatatagttcgactcgttaggttcatga 33831395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 97; Significance: 3e-47; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 511 - 667
Target Start/End: Complemental strand, 21227 - 21072
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    ||||||||||||||||||||||||||||||||||| | ||||| |||||| |||||||||||||||||||||| |||||||||| || || |||||||||    
T  21227 tagggctgacaatgaaccgaaccaactcgaaaatagttcgagactcgattcgataattgattcgttgaacttggttcatgaacc-aaagagtcgaacttg 21129  T
Q  611 agtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcga 667  Q
    |||| |||||||||||| ||||||||||||||||||||| | |||| |||| |||||    
T  21128 agttgaaaattaagctcattaaataaatgagttgaacttgagctaagtatgattcga 21072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135 (Bit Score: 83; Significance: 6e-39; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 520 - 685
Target Start/End: Original strand, 32794 - 32957
Alignment:
Q  520 caatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttgagtttaaaa 619  Q
    |||||||||||||||||||||||||| | ||| | |||||| || ||||| ||||||||||||| ||||   ||| ||||| |||||||||||||  |||    
T  32794 caatgaaccgaaccaactcgaaaatagttcgatactcgattcgacaattggttcgttgaacttggttcac--accaaatgagtcgaacttgagttgtaaa 32891  T
Q  620 ttaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatgaac 685  Q
    ||||||||||||||||||||| |||||||| |||| | ||||||||||||||| ||||||||||||    
T  32892 ttaagctcgttaaataaatgaattgaacttgaacttagtatggttcgactcgtctggttcatgaac 32957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 81; Significance: 1e-37; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 515 - 687
Target Start/End: Complemental strand, 22564142 - 22563970
Alignment:
Q  515 gctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttgagtt 614  Q
    |||| ||| ||||||| ||||||||||||||||  || ||| |||| | |||||| ||||||||||||| |||||||||| ||| |||||||||||||||    
T  22564142 gctggcaacgaaccgatccaactcgaaaataatttgaaatttgattcggtaattgtttcgttgaacttggttcatgaaccaaataaatcgaacttgagtt 22564043  T
Q  615 taaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatgaacca 687  Q
     |||||||||||||| |||| |||||   |||||| ||||| ||||  |||||||||||||||||||||||||    
T  22564042 gaaaattaagctcgtcaaatgaatgaaccgaacttgaactacatataattcgactcgtttggttcatgaacca 22563970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 508 - 683
Target Start/End: Complemental strand, 453626 - 453451
Alignment:
Q  508 aactagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaac 607  Q
    ||||||||||| |||||||||||||||||||||  ||| | ||| |||||| | ||||  | || ||||||||||| ||||||||||||| ||   | ||    
T  453626 aactagggctggcaatgaaccgaaccaactcgattatagttcgacattcgactcgatatctaatccgttgaacttggttcatgaacctaacgagctggac 453527  T
Q  608 ttgagtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatga 683  Q
    ||||||| ||||||||| ||||||| |||||||||||||||| | ||| |||| |||||||||||| |||||||||    
T  453526 ttgagttgaaaattaagttcgttaattaaatgagttgaacttgagctacatatagttcgactcgttaggttcatga 453451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 508 - 649
Target Start/End: Complemental strand, 1091870 - 1091729
Alignment:
Q  508 aactagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaac 607  Q
    ||||||| |||  ||||||| |||| ||||| |||||| |  |||| |||||| ||||||| ||||||||||||||||||||||||| || || ||||||    
T  1091870 aactaggactggtaatgaactgaacaaactcaaaaatagtttgagactcgattcgataattaattcgttgaacttgattcatgaaccaaacgagtcgaac 1091771  T
Q  608 ttgagtttaaaattaagctcgttaaataaatgagttgaactt 649  Q
     |||||||||||||||| |||| ||| |||||||||||||||    
T  1091770 ctgagtttaaaattaagttcgtcaaacaaatgagttgaactt 1091729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 511 - 680
Target Start/End: Original strand, 33279977 - 33280146
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    ||||||||||||||||||||||||||||||  | | | ||  ||| |||| |||||||||||||| ||||||| |||||||||| |||||  ||||  ||    
T  33279977 tagggctgacaatgaaccgaaccaactcgattaaagttcgtaatttgattcgataattgattcgtcgaacttggttcatgaaccaaatgagccgaatatg 33280076  T
Q  611 agtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttca 680  Q
    || ||||||||||| |||| || ||| |||| ||||||| ||||| || | ||| |||||||||||||||    
T  33280077 agcttaaaattaagttcgtcaactaattgagctgaacttgaactatatgtagttagactcgtttggttca 33280146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 520 - 612
Target Start/End: Complemental strand, 43384925 - 43384833
Alignment:
Q  520 caatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttgag 612  Q
    |||||||||||||||||||||||||| | |||||||||||| ||||||| |||||||||| ||| |||||||||| ||||| | |||||||||    
T  43384925 caatgaaccgaaccaactcgaaaatagttcgagattcgattcgataattaattcgttgaagttggttcatgaaccaaatgagttgaacttgag 43384833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 510 - 612
Target Start/End: Complemental strand, 12378493 - 12378391
Alignment:
Q  510 ctagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaactt 609  Q
    |||||| |||||||||||||||| ||||| |||||| | ||||||||| || |||||||||||||||||||||| |||| ||||| ||||| | ||||||    
T  12378493 ctagggttgacaatgaaccgaacaaactcaaaaatagtccgagattcggttcgataattgattcgttgaacttggttcacgaaccaaatgagttgaactt 12378394  T
Q  610 gag 612  Q
    |||    
T  12378393 gag 12378391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 511 - 683
Target Start/End: Complemental strand, 3308074 - 3307902
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    |||||||| ||||||||||||||||||||| |||| | ||  | |||||| || |||| | |||| ||||||  |||||||||| |||||  ||||||||    
T  3308074 tagggctggcaatgaaccgaaccaactcgacaatagttcggaactcgattcgacaattaactcgtagaacttagttcatgaaccaaatgagccgaacttg 3307975  T
Q  611 agtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatga 683  Q
    ||   ||||||||| ||||||||||||||||  |||||| | ||  |||| |||||||||| |||||| ||||    
T  3307974 agcagaaaattaagttcgttaaataaatgagccgaacttgagctgtatatagttcgactcgattggtttatga 3307902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 520 - 683
Target Start/End: Complemental strand, 11161703 - 11161540
Alignment:
Q  520 caatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttgagtttaaaa 619  Q
    ||||||||| |||||||| ||  ||| | ||| |||||| | |||| || || ||||||||||| ||||||||||||| ||   | ||||||| | ||||    
T  11161703 caatgaaccaaaccaacttgattatagttcgacattcgactcgatatttaatccgttgaacttggttcatgaacctaacgagctggacttgagctgaaaa 11161604  T
Q  620 ttaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatga 683  Q
    ||||| ||||||| |||||||| ||||||| | ||| |||| |||||||||||| |||||||||    
T  11161603 ttaagttcgttaattaaatgagctgaacttgagctacatatagttcgactcgttaggttcatga 11161540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 557 - 649
Target Start/End: Original strand, 27189128 - 27189220
Alignment:
Q  557 gatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttgagtttaaaattaagctcgttaaataaatgagttgaactt 649  Q
    |||| |||||||||||||| ||||||| |||||||||| ||||| ||||||||||| | ||||||||| |||| || ||| ||||||||||||    
T  27189128 gattcgataattgattcgtcgaacttggttcatgaaccaaatgagtcgaacttgagctgaaaattaagttcgtcaactaattgagttgaactt 27189220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 520 - 680
Target Start/End: Complemental strand, 34516269 - 34516109
Alignment:
Q  520 caatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttgagtttaaaa 619  Q
    ||||||||||||||||||| |  | | | ||  |||| ||| || ||||||||| ||||||||||||||| |||| |||||  |||||||||| | ||||    
T  34516269 caatgaaccgaaccaactcaattaaagttcgtaattcaattcgacaattgattcattgaacttgattcatcaaccaaatgagccgaacttgagctgaaaa 34516170  T
Q  620 ttaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttca 680  Q
    ||||| ||||  | ||| |||| ||||||| ||||| || | |||||||||||||||||||    
T  34516169 ttaagttcgtcgattaattgagctgaacttgaactatatgtagttcgactcgtttggttca 34516109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 511 - 611
Target Start/End: Complemental strand, 39478190 - 39478090
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    |||||||| |||||||||||||||||||||||||| | ||| | |||||| |||||||| ||| ||| ||||| |||||||||| ||||| | |||||||    
T  39478190 tagggctggcaatgaaccgaaccaactcgaaaatagttcgatactcgattcgataattggttcattggacttggttcatgaaccaaatgagttgaacttg 39478091  T
Q  611 a 611  Q
    |    
T  39478090 a 39478090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 571 - 685
Target Start/End: Complemental strand, 43967590 - 43967476
Alignment:
Q  571 ttcgttgaacttgattcatgaacctaatgaatcgaacttgagtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactc 670  Q
    ||||||||| ||| |||||||||| || ||  |||||||||| | || |||||| ||||||| |||||||||||||||| |  || |||| |||||||||    
T  43967590 ttcgttgaatttggttcatgaaccaaacgagccgaacttgagctaaagattaagttcgttaactaaatgagttgaacttgagttatatatagttcgactc 43967491  T
Q  671 gtttggttcatgaac 685  Q
    |||||||||| ||||    
T  43967490 gtttggttcacgaac 43967476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 555 - 674
Target Start/End: Complemental strand, 23181251 - 23181132
Alignment:
Q  555 tcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttgagtttaaaattaagctcgttaaataaatgagttgaacttaaact 654  Q
    |||||| || ||||||||||| ||| ||| |||||||||| |||||  |||||||||  | ||||||||| |||| || ||| |||| ||||||| ||||    
T  23181251 tcgattcgacaattgattcgtcgaatttggttcatgaaccaaatgagccgaacttgaactgaaaattaagttcgtaaactaattgagctgaacttgaact 23181152  T
Q  655 aaatatggttcgactcgttt 674  Q
    | || | |||||||||||||    
T  23181151 agatgtagttcgactcgttt 23181132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 574 - 685
Target Start/End: Complemental strand, 34655112 - 34655001
Alignment:
Q  574 gttgaacttgattcatgaacctaatgaatcgaacttgagtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtt 673  Q
    |||||||||  |||||||||| || || ||||||||||| | || |||||| | ||||| |||||||||| ||||| |  || |||| ||||||||||||    
T  34655112 gttgaacttagttcatgaaccaaacgagtcgaacttgagctaaagattaagtttgttaactaaatgagttaaacttgagttatatatagttcgactcgtt 34655013  T
Q  674 tggttcatgaac 685  Q
    ||||||| ||||    
T  34655012 tggttcacgaac 34655001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 572 - 683
Target Start/End: Original strand, 9412585 - 9412696
Alignment:
Q  572 tcgttgaacttgattcatgaacctaatgaatcgaacttgagtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcg 671  Q
    |||||||||||| |||||||||| |||||   ||||||||||| | ||||||  |||||| ||||||||| |||| || |  || ||||  |||||||||    
T  9412585 tcgttgaacttggttcatgaaccaaatgagctgaacttgagttgagaattaaattcgttacataaatgagctgaatttgagttatatataattcgactcg 9412684  T
Q  672 tttggttcatga 683  Q
    |||  |||||||    
T  9412685 tttaattcatga 9412696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 608 - 654
Target Start/End: Original strand, 28492749 - 28492795
Alignment:
Q  608 ttgagtttaaaattaagctcgttaaataaatgagttgaacttaaact 654  Q
    ||||||| ||||||||| || ||| ||||||||||||||||||||||    
T  28492749 ttgagttgaaaattaagttcattagataaatgagttgaacttaaact 28492795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 635 - 689
Target Start/End: Complemental strand, 39478106 - 39478052
Alignment:
Q  635 aaatgagttgaacttaaactaaatatggttcgactcgtttggttcatgaaccagc 689  Q
    ||||||||||||||| ||||   |||||||||||||||||| |||||||| ||||    
T  39478106 aaatgagttgaacttgaacttggtatggttcgactcgtttgattcatgaaacagc 39478052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 75; Significance: 4e-34; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 510 - 680
Target Start/End: Complemental strand, 14567 - 14397
Alignment:
Q  510 ctagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaactt 609  Q
    ||||||||||||||||||||||||||| |||||||| | ||| | |||||| | |||||||||| ||||||||| |||||||||| ||||| | ||||||    
T  14567 ctagggctgacaatgaaccgaaccaacccgaaaatagttcgaaactcgattcggtaattgattcattgaacttggttcatgaaccaaatgatttgaactt 14468  T
Q  610 gagtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttca 680  Q
    ||||  |||||||||||||| |||||||||||  |||||| |  ||   || |||||||||||||||||||    
T  14467 gagtcgaaaattaagctcgtcaaataaatgagccgaactttagttatggatagttcgactcgtttggttca 14397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 69; Significance: 1e-30; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 511 - 683
Target Start/End: Complemental strand, 96420 - 96248
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    |||| ||||||||||||||||| | |||||||||| | ||||||||| || | ||| | |||| |||||||| |||| |||||| ||||| || |||||     
T  96420 taggactgacaatgaaccgaactagctcgaaaatagttcgagattcggttcgttaaataattcattgaacttaattcgtgaaccaaatgagtccaactta 96321  T
Q  611 agtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatga 683  Q
    |||| |||||||||||||||||||||||||||||||||| |  ||  | |  |||||||||||||||||||||    
T  96320 agttcaaaattaagctcgttaaataaatgagttgaacttgagttatgtgtaattcgactcgtttggttcatga 96248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0444 (Bit Score: 65; Significance: 4e-28; HSPs: 1)
Name: scaffold0444
Description:

Target: scaffold0444; HSP #1
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 569 - 685
Target Start/End: Original strand, 825 - 941
Alignment:
Q  569 gattcgttgaacttgattcatgaacctaatgaatcgaacttgagtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgac 668  Q
    ||||||||||||||| |||||||||| ||||| | ||| ||| ||| |||||||||||||||||||||||||||||||||| | |||| |||  ||||||    
T  825 gattcgttgaacttggttcatgaaccaaatgagttgaatttgggttgaaaattaagctcgttaaataaatgagttgaacttgagctaagtataattcgac 924  T
Q  669 tcgtttggttcatgaac 685  Q
    |||| ||||||||||||    
T  925 tcgtctggttcatgaac 941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 64; Significance: 1e-27; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 520 - 679
Target Start/End: Original strand, 51311 - 51470
Alignment:
Q  520 caatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttgagtttaaaa 619  Q
    ||||||||||||| | |||||||||| | ||||||||| || | ||| | |||||||||||||  ||| |||||| ||||| |||||| ||| |||||||    
T  51311 caatgaaccgaactagctcgaaaatagttcgagattcggttcggtaaataattcgttgaacttagttcgtgaaccaaatgagtcgaacgtgattttaaaa 51410  T
Q  620 ttaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttc 679  Q
    ||||||| |||||||||||||||||||||| || ||  | | ||||||||| ||||||||    
T  51411 ttaagcttgttaaataaatgagttgaacttgaattatgtgtagttcgactcatttggttc 51470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0224 (Bit Score: 59; Significance: 1e-24; HSPs: 1)
Name: scaffold0224
Description:

Target: scaffold0224; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 553 - 683
Target Start/End: Original strand, 7350 - 7480
Alignment:
Q  553 attcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttgagtttaaaattaagctcgttaaataaatgagttgaacttaaa 652  Q
    |||||||| |||||||||||||| ||||||| |||||||||| |||||  |||||||||| | ||||||||| ||| ||| ||| |||| ||||||| ||    
T  7350 attcgattcgataattgattcgtcgaacttggttcatgaaccaaatgagccgaacttgagctgaaaattaagttcgctaactaattgagctgaacttgaa 7449  T
Q  653 ctaaatatggttcgactcgtttggttcatga 683  Q
    | | |||| | ||||||||||||||||||||    
T  7450 ccatatataggtcgactcgtttggttcatga 7480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0260 (Bit Score: 58; Significance: 5e-24; HSPs: 2)
Name: scaffold0260
Description:

Target: scaffold0260; HSP #1
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 520 - 681
Target Start/End: Complemental strand, 11600 - 11439
Alignment:
Q  520 caatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttgagtttaaaa 619  Q
    |||||||||||||||||||||| ||| |   | ||| || | ||||||| ||||||||||||||||||||  ||| |||||  ||||||| || | ||||    
T  11600 caatgaaccgaaccaactcgaacatagtttaaaatttgactcgataattaattcgttgaacttgattcatataccaaatgagccgaacttcagatgaaaa 11501  T
Q  620 ttaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcat 681  Q
    ||||| ||||||| |||||||| |||| || ||||| ||||  |||||||||||||||||||    
T  11500 ttaagttcgttaattaaatgagctgaatttgaactatatataattcgactcgtttggttcat 11439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0260; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 520 - 681
Target Start/End: Complemental strand, 10120 - 9961
Alignment:
Q  520 caatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttgagtttaaaa 619  Q
    |||||||||||| ||||||||| ||| |   | ||| || | || |||| |||||||||| |||||||||| ||| |||||  ||||||| || | ||||    
T  10120 caatgaaccgaatcaactcgaatatagtttaaaatttgactcgacaattaattcgttgaatttgattcatgtaccaaatgagccgaacttaagatgaaaa 10021  T
Q  620 ttaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcat 681  Q
    ||||| ||||||| |||||||| |||| ||  |||| |||   |||||||||||||||||||    
T  10020 ttaagttcgttaattaaatgagctgaatttgtactatataa--ttcgactcgtttggttcat 9961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 58; Significance: 5e-24; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 511 - 680
Target Start/End: Original strand, 26621 - 26790
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    |||||||||||||||| ||||||||||| |  | | | ||  |||||||| || || ||||| |||||||||| |||||||| | ||||| |||||||||    
T  26621 tagggctgacaatgaatcgaaccaactcaattagagttcgtaattcgattcgacaactgatttgttgaacttggttcatgaatcaaatgagtcgaacttg 26720  T
Q  611 agtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttca 680  Q
    || | ||||||||| |||| || ||| |||| ||||||||| ||| || | |||||||||||||||||||    
T  26721 agctgaaaattaagttcgtcaactaattgagctgaacttaagctatatgtagttcgactcgtttggttca 26790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 53; Significance: 5e-21; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 511 - 683
Target Start/End: Complemental strand, 19436 - 19264
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    |||||||| |||||||||||||||||||||  ||| | ||| |||||| | ||||  | || | ||||||||| ||||||||||||| ||   | |||||    
T  19436 tagggctggcaatgaaccgaaccaactcgattatagttcgacattcgactcgatatctaatcctttgaacttggttcatgaacctaacgagctggacttg 19337  T
Q  611 agtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatga 683  Q
    || | ||||||||| ||||||| |||||||| ||||||| | ||| ||||  ||||||||||| |||||||||    
T  19336 agctgaaaattaagttcgttaattaaatgagctgaacttgagctacatataattcgactcgttaggttcatga 19264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 48; Significance: 5e-18; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 520 - 683
Target Start/End: Original strand, 124490 - 124653
Alignment:
Q  520 caatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttgagtttaaaa 619  Q
    |||||||||||||||||||||| ||| | ||| ||| || | || ||||| | | ||||||||| |||||||||| ||||| ||||||||||| | |  |    
T  124490 caatgaaccgaaccaactcgaatatagttcgaaatttgactcgacaattggtccattgaacttggttcatgaaccaaatgagtcgaacttgagctgatta 124589  T
Q  620 ttaagctcgttaaataaatgagttgaacttaaactaaatatggttcgactcgtttggttcatga 683  Q
    ||||| | ||||| |||||||| |||| || ||||| | ||  ||||| |||||||||||||||    
T  124590 ttaagtttgttaattaaatgagctgaatttgaactatagatatttcgattcgtttggttcatga 124653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0263 (Bit Score: 46; Significance: 8e-17; HSPs: 1)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 575 - 648
Target Start/End: Complemental strand, 17311 - 17238
Alignment:
Q  575 ttgaacttgattcatgaacctaatgaatcgaacttgagtttaaaattaagctcgttaaataaatgagttgaact 648  Q
    |||||||| |||| |||||| ||||| |||| ||||| || |||||||||||||||||||||||||||||||||    
T  17311 ttgaacttaattcgtgaaccaaatgagtcgagcttgaattcaaaattaagctcgttaaataaatgagttgaact 17238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0954 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0954
Description:

Target: scaffold0954; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 570 - 649
Target Start/End: Original strand, 243 - 322
Alignment:
Q  570 attcgttgaacttgattcatgaacctaatgaatcgaacttgagtttaaaattaagctcgttaaataaatgagttgaactt 649  Q
    |||||||| ||||| |||||||||||||| |  |||||||||||| | ||||||| ||||||| ||||||||||||||||    
T  243 attcgttggacttggttcatgaacctaattagccgaacttgagttaagaattaagttcgttaattaaatgagttgaactt 322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 511 - 665
Target Start/End: Complemental strand, 11530 - 11376
Alignment:
Q  511 tagggctgacaatgaaccgaaccaactcgaaaataatgcgagattcgatttgataattgattcgttgaacttgattcatgaacctaatgaatcgaacttg 610  Q
    |||| ||||||||||||||||||||||||| |||| |  |  | |||||| || ||||   |||| ||||||  |||||||||| |||||   ||||||     
T  11530 taggactgacaatgaaccgaaccaactcgataatagtttggaactcgattcgacaattacctcgtcgaacttagttcatgaaccaaatgaggtgaactta 11431  T
Q  611 agtttaaaattaagctcgttaaataaatgagttgaacttaaactaaatatggttc 665  Q
    |||| ||||||||| ||||||||||||||||  |||||||| ||| |||| ||||    
T  11430 agttaaaaattaagttcgttaaataaatgagccgaacttaagctatatatagttc 11376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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