View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3388_high_38 (Length: 206)
Name: NF3388_high_38
Description: NF3388
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3388_high_38 |
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Alignment Details
Target: chr8 (Bit Score: 173; Significance: 3e-93; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 173; E-Value: 3e-93
Query Start/End: Original strand, 13 - 189
Target Start/End: Original strand, 45347347 - 45347523
Alignment:
| Q |
13 |
gagatgaaaagagggtcgaacacgttgatggtaccatgcaattgtgaagccattacctctcattcattttccttgttagttttaacactacaaataaaac |
112 |
Q |
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| T |
45347347 |
gagatgaaaagagggtcgaacacgttgatggtaccatgcaattgtgaagccattacctctcattcattttccttgttagttttaacgctacaaataaaac |
45347446 |
T |
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| Q |
113 |
ctttgcttgtcaacctatctcaatttgactcttccttccttccttcctgtgtgcctcacaacttacacataatctct |
189 |
Q |
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| T |
45347447 |
ctttgcttgtcaacctatctcaatttgactcttccttccttccttcctgtgtgcctcacaacttacacataatctct |
45347523 |
T |
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