View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3389_low_7 (Length: 249)

Name: NF3389_low_7
Description: NF3389
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3389_low_7
NF3389_low_7
[»] chr5 (21 HSPs)
chr5 (113-217)||(15480191-15480296)
chr5 (113-217)||(19523092-19523197)
chr5 (117-217)||(36187981-36188082)
chr5 (114-180)||(31881590-31881656)
chr5 (112-179)||(34756615-34756682)
chr5 (111-177)||(22987470-22987537)
chr5 (114-180)||(16592845-16592911)
chr5 (114-180)||(30853266-30853332)
chr5 (114-182)||(2274798-2274866)
chr5 (114-180)||(31194767-31194833)
chr5 (126-180)||(16199026-16199080)
chr5 (123-180)||(38869593-38869650)
chr5 (114-162)||(8433593-8433641)
chr5 (120-180)||(27923891-27923951)
chr5 (9-60)||(12285616-12285667)
chr5 (126-180)||(16799556-16799610)
chr5 (13-59)||(42663222-42663268)
chr5 (10-50)||(3416576-3416616)
chr5 (17-65)||(7671222-7671270)
chr5 (10-50)||(32460017-32460057)
chr5 (5-57)||(34206226-34206278)
[»] chr4 (34 HSPs)
chr4 (113-217)||(5128946-5129050)
chr4 (114-217)||(37514558-37514662)
chr4 (128-217)||(1105445-1105535)
chr4 (114-180)||(10431442-10431508)
chr4 (113-179)||(55255079-55255145)
chr4 (111-180)||(47127978-47128047)
chr4 (113-180)||(45560704-45560771)
chr4 (117-180)||(17679220-17679283)
chr4 (112-180)||(48208448-48208516)
chr4 (130-179)||(38209842-38209891)
chr4 (116-180)||(13459786-13459850)
chr4 (112-168)||(32915295-32915351)
chr4 (133-180)||(9579469-9579516)
chr4 (133-180)||(9585164-9585211)
chr4 (126-180)||(27596639-27596693)
chr4 (130-180)||(34769533-34769583)
chr4 (112-161)||(10978142-10978191)
chr4 (127-180)||(35780556-35780609)
chr4 (125-180)||(16844838-16844893)
chr4 (126-173)||(54779453-54779500)
chr4 (126-180)||(24969254-24969308)
chr4 (126-180)||(37777459-37777513)
chr4 (117-158)||(23510922-23510963)
chr4 (17-58)||(44918235-44918276)
chr4 (126-166)||(32128404-32128444)
chr4 (2-50)||(38147555-38147603)
chr4 (120-180)||(54083478-54083538)
chr4 (150-180)||(23510887-23510917)
chr4 (130-180)||(40089340-40089390)
chr4 (8-50)||(48171887-48171929)
chr4 (5-50)||(51298706-51298751)
chr4 (126-166)||(2790988-2791028)
chr4 (3-51)||(24540848-24540896)
chr4 (144-180)||(51964204-51964240)
[»] chr8 (15 HSPs)
chr8 (114-216)||(20003839-20003942)
chr8 (114-213)||(37430267-37430367)
chr8 (114-179)||(2952473-2952538)
chr8 (114-179)||(5860996-5861061)
chr8 (114-179)||(30883110-30883175)
chr8 (126-179)||(3048774-3048827)
chr8 (116-180)||(41878167-41878231)
chr8 (126-180)||(45472203-45472257)
chr8 (120-180)||(42600590-42600650)
chr8 (120-166)||(10917200-10917246)
chr8 (10-50)||(40512645-40512685)
chr8 (114-162)||(45294597-45294645)
chr8 (126-180)||(23606855-23606909)
chr8 (5-50)||(10982732-10982777)
chr8 (7-59)||(28084279-28084331)
[»] chr7 (12 HSPs)
chr7 (113-217)||(12596391-12596496)
chr7 (114-217)||(10955378-10955482)
chr7 (112-179)||(18777019-18777086)
chr7 (115-180)||(28749582-28749647)
chr7 (126-180)||(29076942-29076998)
chr7 (126-180)||(47985202-47985256)
chr7 (126-180)||(48984077-48984131)
chr7 (126-166)||(19691909-19691949)
chr7 (129-180)||(20091514-20091565)
chr7 (12-62)||(3948048-3948098)
chr7 (126-180)||(23551305-23551359)
chr7 (126-180)||(24525918-24525972)
[»] chr1 (20 HSPs)
chr1 (114-217)||(3406323-3406427)
chr1 (114-217)||(3440393-3440497)
chr1 (114-217)||(14146205-14146309)
chr1 (114-217)||(41697241-41697345)
chr1 (113-213)||(6888468-6888569)
chr1 (126-217)||(6771708-6771800)
chr1 (114-217)||(16139960-16140064)
chr1 (113-179)||(44655538-44655604)
chr1 (114-179)||(27906949-27907014)
chr1 (126-180)||(10912094-10912148)
chr1 (114-160)||(50880568-50880614)
chr1 (126-172)||(5027982-5028028)
chr1 (126-180)||(23181723-23181777)
chr1 (120-180)||(13913716-13913776)
chr1 (120-180)||(40502024-40502084)
chr1 (126-180)||(1367111-1367165)
chr1 (126-166)||(44895479-44895519)
chr1 (124-179)||(51607674-51607729)
chr1 (126-180)||(9173255-9173309)
chr1 (126-180)||(27559459-27559513)
[»] chr2 (19 HSPs)
chr2 (114-216)||(7162677-7162780)
chr2 (126-217)||(3952911-3953003)
chr2 (113-179)||(3155002-3155068)
chr2 (112-179)||(4505677-4505744)
chr2 (116-179)||(6964794-6964857)
chr2 (114-180)||(12337689-12337755)
chr2 (114-179)||(34693147-34693212)
chr2 (114-179)||(34715559-34715624)
chr2 (111-177)||(3399506-3399572)
chr2 (115-180)||(40635963-40636028)
chr2 (112-180)||(41213928-41213996)
chr2 (118-179)||(8907330-8907391)
chr2 (120-180)||(27506975-27507035)
chr2 (126-180)||(9045844-9045898)
chr2 (126-180)||(26715943-26715997)
chr2 (116-161)||(5952949-5952993)
chr2 (128-180)||(24410250-24410302)
chr2 (126-180)||(10762799-10762853)
chr2 (5-59)||(30243247-30243301)
[»] chr6 (21 HSPs)
chr6 (114-217)||(24711104-24711208)
chr6 (114-217)||(30832629-30832732)
chr6 (116-180)||(23070889-23070953)
chr6 (114-180)||(12083640-12083706)
chr6 (114-179)||(13727650-13727715)
chr6 (114-179)||(21479284-21479349)
chr6 (114-180)||(19741223-19741289)
chr6 (117-175)||(21280336-21280394)
chr6 (114-171)||(27314773-27314830)
chr6 (111-179)||(33773897-33773964)
chr6 (114-171)||(27579084-27579141)
chr6 (126-180)||(1156017-1156071)
chr6 (128-180)||(19986980-19987032)
chr6 (126-180)||(17353771-17353825)
chr6 (6-60)||(17458363-17458417)
chr6 (126-180)||(27788922-27788976)
chr6 (9-50)||(5954617-5954658)
chr6 (111-166)||(235473-235528)
chr6 (126-180)||(20711952-20712006)
chr6 (10-62)||(1918473-1918525)
chr6 (10-50)||(29283821-29283861)
[»] chr3 (31 HSPs)
chr3 (113-217)||(21582667-21582772)
chr3 (114-213)||(42098698-42098798)
chr3 (114-217)||(47467582-47467685)
chr3 (114-217)||(53149419-53149523)
chr3 (112-188)||(50258726-50258802)
chr3 (111-179)||(36716276-36716344)
chr3 (111-180)||(13795184-13795253)
chr3 (114-179)||(38681348-38681413)
chr3 (115-180)||(3954852-3954917)
chr3 (114-179)||(27078819-27078884)
chr3 (114-179)||(27084616-27084681)
chr3 (126-179)||(54619454-54619507)
chr3 (130-179)||(36605862-36605911)
chr3 (114-161)||(29620618-29620665)
chr3 (126-180)||(1148354-1148408)
chr3 (113-177)||(18372032-18372095)
chr3 (126-177)||(48156954-48157005)
chr3 (126-180)||(9878919-9878973)
chr3 (126-180)||(34290874-34290928)
chr3 (126-180)||(43207474-43207528)
chr3 (126-180)||(44708294-44708348)
chr3 (126-180)||(53507117-53507171)
chr3 (120-180)||(50939468-50939528)
chr3 (9-49)||(52089323-52089363)
chr3 (134-180)||(8074087-8074133)
chr3 (9-62)||(2078234-2078287)
chr3 (10-59)||(7824804-7824853)
chr3 (10-51)||(8174275-8174316)
chr3 (114-163)||(33426350-33426399)
chr3 (114-162)||(25373642-25373690)
chr3 (6-58)||(48517669-48517721)
[»] scaffold0070 (1 HSPs)
scaffold0070 (114-180)||(1011-1077)
[»] scaffold0001 (2 HSPs)
scaffold0001 (152-214)||(181851-181914)
scaffold0001 (114-159)||(181435-181480)
[»] scaffold0039 (1 HSPs)
scaffold0039 (126-180)||(106391-106445)
[»] scaffold0045 (2 HSPs)
scaffold0045 (13-65)||(63853-63905)
scaffold0045 (13-65)||(71185-71237)


Alignment Details
Target: chr5 (Bit Score: 90; Significance: 1e-43; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 113 - 217
Target Start/End: Complemental strand, 15480296 - 15480191
Alignment:
Q  113 tcaggggcgtccatgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaagagt-ggggtttctcatgattgattttggtgt 211  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||    
T  15480296 tcaggggcgtccctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaagagtgggggttcctcatgattgattttggtgt 15480197  T
Q  212 taggtg 217  Q
    ||||||    
T  15480196 taggtg 15480191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 113 - 217
Target Start/End: Original strand, 19523092 - 19523197
Alignment:
Q  113 tcaggggcgtccatgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaagagt-ggggtttctcatgattgattttggtgt 211  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||    
T  19523092 tcaggggcgtccctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaagagtgggggttcctcatgattgattttggtgt 19523191  T
Q  212 taggtg 217  Q
    ||||||    
T  19523192 taggtg 19523197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 117 - 217
Target Start/End: Complemental strand, 36188082 - 36187981
Alignment:
Q  117 gggcgtccatgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaagagt-ggggtttctcatgattgattttggtgttagg 215  Q
    |||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| ||||||||| ||||||||||||||    
T  36188082 gggcgtccctgagggggtgcaaacagctcaaacgagttgggcctccctcaaggatgggcctcaagagtgggggttcctcatgattaattttggtgttagg 36187983  T
Q  216 tg 217  Q
    ||    
T  36187982 tg 36187981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 114 - 180
Target Start/End: Complemental strand, 31881656 - 31881590
Alignment:
Q  114 caggggcgtccatgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 180  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  31881656 caggggcgtccctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatggacctcaa 31881590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 112 - 179
Target Start/End: Complemental strand, 34756682 - 34756615
Alignment:
Q  112 atcaggggcgtccatgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 179  Q
    ||||| ||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34756682 atcagaggcgttcctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 34756615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 111 - 177
Target Start/End: Complemental strand, 22987537 - 22987470
Alignment:
Q  111 aatcaggggcgtccatgaggggg-tgcaaacagctcaaacgagctgggcctccctcaaggatgggcct 177  Q
    |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| |||||||||    
T  22987537 aatcaggggcgtccctgaggggggtgcaaacagctcaaacgagctgggcctccctcaaagatgggcct 22987470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 114 - 180
Target Start/End: Complemental strand, 16592911 - 16592845
Alignment:
Q  114 caggggcgtccatgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 180  Q
    ||||||||||| ||||||||||||||||||||||||||||||| ||||| | |||||||||||||||    
T  16592911 caggggcgtccctgagggggtgcaaacagctcaaacgagctggacctcctttaaggatgggcctcaa 16592845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 114 - 180
Target Start/End: Original strand, 30853266 - 30853332
Alignment:
Q  114 caggggcgtccatgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 180  Q
    ||||||||||| | ||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  30853266 caggggcgtcccttagggggtgcaaacagctcaaacgagctgggcctccttcaaggatggacctcaa 30853332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 114 - 182
Target Start/End: Original strand, 2274798 - 2274866
Alignment:
Q  114 caggggcgtccatgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaaga 182  Q
    ||||||||| | ||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||    
T  2274798 caggggcgttcctgagggggtgcaaacagctcaaatgagttgggcctccctcaaggatggacctcaaga 2274866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 114 - 180
Target Start/End: Complemental strand, 31194833 - 31194767
Alignment:
Q  114 caggggcgtccatgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 180  Q
    ||||||||| |  |||| |||||||||| ||||||||| ||||||||| ||||||||||||||||||    
T  31194833 caggggcgttccagaggaggtgcaaacaactcaaacgaactgggcctctctcaaggatgggcctcaa 31194767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 126 - 180
Target Start/End: Complemental strand, 16199080 - 16199026
Alignment:
Q  126 tgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 180  Q
    ||||||||||||||||||||||  |||||||||||||||||   |||||||||||    
T  16199080 tgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaa 16199026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 180
Target Start/End: Complemental strand, 38869650 - 38869593
Alignment:
Q  123 ccatgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 180  Q
    |||||||||||||||||||||||||   ||||||||||||||||   |||||||||||    
T  38869650 ccatgagggggtgcaaacagctcaacaaagctgggcctccctcagtcatgggcctcaa 38869593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 162
Target Start/End: Complemental strand, 8433641 - 8433593
Alignment:
Q  114 caggggcgtccatgagggggtgcaaacagctcaaacgagctgggcctcc 162  Q
    ||||| ||||| |||||||||||||||||||| || |||||||||||||    
T  8433641 cagggccgtccttgagggggtgcaaacagctctaatgagctgggcctcc 8433593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 180
Target Start/End: Original strand, 27923891 - 27923951
Alignment:
Q  120 cgtccatgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 180  Q
    ||||| ||||||||||||||||||||||  ||||||| |||||||||   |||||||||||    
T  27923891 cgtccctgagggggtgcaaacagctcaacagagctggacctccctcagtcatgggcctcaa 27923951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 60
Target Start/End: Original strand, 12285616 - 12285667
Alignment:
Q  9 aaccttgtatatattatatattgtctctaacaactgagttaaagtcacgaga 60  Q
    ||||||| |||||||||||||||||| || ||||||||||||  ||||||||    
T  12285616 aaccttgcatatattatatattgtctttatcaactgagttaagttcacgaga 12285667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 180
Target Start/End: Complemental strand, 16799610 - 16799556
Alignment:
Q  126 tgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 180  Q
    ||||||||||||||||||||||  ||||| |||||||||||   |||||||||||    
T  16799610 tgagggggtgcaaacagctcaatagagctaggcctccctcagtcatgggcctcaa 16799556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 59
Target Start/End: Original strand, 42663222 - 42663268
Alignment:
Q  13 ttgtatatattatatattgtctctaacaactgagttaaagtcacgag 59  Q
    ||||||||||||| ||||||  ||||||||||||||||| |||||||    
T  42663222 ttgtatatattatgtattgttcctaacaactgagttaaactcacgag 42663268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 50
Target Start/End: Original strand, 3416576 - 3416616
Alignment:
Q  10 accttgtatatattatatattgtctctaacaactgagttaa 50  Q
    ||||||||||||||||| ||||| |||| ||||||||||||    
T  3416576 accttgtatatattatacattgtttctatcaactgagttaa 3416616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 65
Target Start/End: Complemental strand, 7671270 - 7671222
Alignment:
Q  17 atatattatatattgtctctaacaactgagttaaagtcacgagaaccat 65  Q
    |||| ||||| ||||| |||| ||||||||||||| |||||||||||||    
T  7671270 atatcttatacattgtttctatcaactgagttaaactcacgagaaccat 7671222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 50
Target Start/End: Complemental strand, 32460057 - 32460017
Alignment:
Q  10 accttgtatatattatatattgtctctaacaactgagttaa 50  Q
    |||||||||||||||| |||||||| || ||||||||||||    
T  32460057 accttgtatatattatgtattgtctttatcaactgagttaa 32460017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 34206278 - 34206226
Alignment:
Q  5 cccgaaccttgtatatattatatattgtctctaacaactgagttaaagtcacg 57  Q
    ||||||||||| |||||||||  ||||||| || ||||||||||||| |||||    
T  34206278 cccgaaccttgcatatattatgcattgtctttaccaactgagttaaactcacg 34206226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 89; Significance: 5e-43; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 113 - 217
Target Start/End: Complemental strand, 5129050 - 5128946
Alignment:
Q  113 tcaggggcgtccatgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaagagtggggtttctcatgattgattttggtgtt 212  Q
    |||||||||| | |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||    
T  5129050 tcaggggcgttcctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggataggcctcaagagtggggttcctcatgattgattttggtgtt 5128951  T
Q  213 aggtg 217  Q
    |||||    
T  5128950 aggtg 5128946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 114 - 217
Target Start/End: Original strand, 37514558 - 37514662
Alignment:
Q  114 caggggcgtccatgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaagagt-ggggtttctcatgattgattttggtgtt 212  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  37514558 caggggcgtccctgagggggtgcaaacagctcaaacgagctgggcctcctccaaggatgggcctcaagagtgggggtttctcatgattgattttggtgtt 37514657  T
Q  213 aggtg 217  Q
    |||||    
T  37514658 aggtg 37514662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 128 - 217
Target Start/End: Original strand, 1105445 - 1105535
Alignment:
Q  128 agggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaagagt-ggggtttctcatgattgattttggtgttaggtg 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  1105445 agggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaagagtgggggttcctcatgattgattttggtgttaggtg 1105535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 114 - 180
Target Start/End: Complemental strand, 10431508 - 10431442
Alignment:
Q  114 caggggcgtccatgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 180  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10431508 caggggcgtccctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 10431442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 113 - 179
Target Start/End: Original strand, 55255079 - 55255145
Alignment:
Q  113 tcaggggcgtccatgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 179  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55255079 tcaggggcgtccctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 55255145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 111 - 180
Target Start/End: Original strand, 47127978 - 47128047
Alignment:
Q  111 aatcaggggcgtccatgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 180  Q
    |||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  47127978 aatcaggggcgtccctgagggggtgcaaacagcccaaacgagctgggcctccctcaaggatgggcctcaa 47128047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 113 - 180
Target Start/End: Complemental strand, 45560771 - 45560704
Alignment:
Q  113 tcaggggcgtccatgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 180  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  45560771 tcaggggcgtccttgagggggtgcaaacagctcaaacgagctgggcctccctcaaagatgggcctcaa 45560704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 117 - 180
Target Start/End: Original strand, 17679220 - 17679283
Alignment:
Q  117 gggcgtccatgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 180  Q
    |||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  17679220 gggcgtccctgagggggtgcaaacagctcaaacgagctgagcctccctcaaggatgggcctcaa 17679283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 112 - 180
Target Start/End: Original strand, 48208448 - 48208516
Alignment:
Q  112 atcaggggcgtccatgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 180  Q
    |||| |||| ||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  48208448 atcatgggcatccctgagggggtgcaaacagctcaaacgagttgggcctccctcaaggatgggcctcaa 48208516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 130 - 179
Target Start/End: Complemental strand, 38209891 - 38209842
Alignment:
Q  130 ggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 179  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38209891 ggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 38209842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 116 - 180
Target Start/End: Original strand, 13459786 - 13459850
Alignment:
Q  116 ggggcgtccatgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 180  Q
    ||||||| | |||||||||||||||||||||||||||||| |||||||| |||||||||||||||    
T  13459786 ggggcgttcctgagggggtgcaaacagctcaaacgagctgagcctcccttaaggatgggcctcaa 13459850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 112 - 168
Target Start/End: Original strand, 32915295 - 32915351
Alignment:
Q  112 atcaggggcgtccatgagggggtgcaaacagctcaaacgagctgggcctccctcaag 168  Q
    ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  32915295 atcaggggcgtccctgagggggtgcaaacagctcaaacgagttgggcctccctcaag 32915351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 133 - 180
Target Start/End: Complemental strand, 9579516 - 9579469
Alignment:
Q  133 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 180  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  9579516 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcttcaa 9579469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 133 - 180
Target Start/End: Complemental strand, 9585211 - 9585164
Alignment:
Q  133 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 180  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  9585211 gtgcaaacagctcaaacgagctgggcctccctcaaggatgggcttcaa 9585164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 126 - 180
Target Start/End: Complemental strand, 27596693 - 27596639
Alignment:
Q  126 tgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 180  Q
    ||||||||||| |||||||||||||||||||||||||| | ||||||||||||||    
T  27596693 tgagggggtgcgaacagctcaaacgagctgggcctcccccgaggatgggcctcaa 27596639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 130 - 180
Target Start/End: Complemental strand, 34769583 - 34769533
Alignment:
Q  130 ggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 180  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||||||    
T  34769583 ggggtgcaaatagctcaaacgagttgggcctccctcaaggatgggcctcaa 34769533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 112 - 161
Target Start/End: Original strand, 10978142 - 10978191
Alignment:
Q  112 atcaggggcgtccatgagggggtgcaaacagctcaaacgagctgggcctc 161  Q
    ||||||||||||| |||| ||||||||||||||||||||||||| |||||    
T  10978142 atcaggggcgtccctgagagggtgcaaacagctcaaacgagctgcgcctc 10978191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 180
Target Start/End: Complemental strand, 35780609 - 35780556
Alignment:
Q  127 gagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 180  Q
    ||||||||||||||||||||| ||||||||||||||| || |||| ||||||||    
T  35780609 gagggggtgcaaacagctcaaccgagctgggcctcccccacggataggcctcaa 35780556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 125 - 180
Target Start/End: Original strand, 16844838 - 16844893
Alignment:
Q  125 atgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 180  Q
    |||||||||||||||||||||||  |||||||||||||||||   |||||||||||    
T  16844838 atgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaa 16844893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 173
Target Start/End: Original strand, 54779453 - 54779500
Alignment:
Q  126 tgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgg 173  Q
    |||||| ||||||||||||||| ||||||||||||||| |||||||||    
T  54779453 tgagggagtgcaaacagctcaaccgagctgggcctcccccaaggatgg 54779500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 126 - 180
Target Start/End: Original strand, 24969254 - 24969308
Alignment:
Q  126 tgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 180  Q
    ||||||||||||||||||||||  |||||||||||||||||   |||||||||||    
T  24969254 tgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaa 24969308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 126 - 180
Target Start/End: Complemental strand, 37777513 - 37777459
Alignment:
Q  126 tgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 180  Q
    ||||||||||||||||||||||  ||||||| ||||||||||  |||||||||||    
T  37777513 tgagggggtgcaaacagctcaacagagctggacctccctcaatcatgggcctcaa 37777459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 117 - 158
Target Start/End: Complemental strand, 23510963 - 23510922
Alignment:
Q  117 gggcgtccatgagggggtgcaaacagctcaaacgagctgggc 158  Q
    |||||||| |||||||||||||||||||||||||| ||||||    
T  23510963 gggcgtccctgagggggtgcaaacagctcaaacgaactgggc 23510922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 58
Target Start/End: Original strand, 44918235 - 44918276
Alignment:
Q  17 atatattatatattgtctctaacaactgagttaaagtcacga 58  Q
    ||||||||||||||||||||| ||||||||||||| ||||||    
T  44918235 atatattatatattgtctctatcaactgagttaaactcacga 44918276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 166
Target Start/End: Original strand, 32128404 - 32128444
Alignment:
Q  126 tgagggggtgcaaacagctcaaacgagctgggcctccctca 166  Q
    ||||||||||||||||||||||  |||||||||||||||||    
T  32128404 tgagggggtgcaaacagctcaacagagctgggcctccctca 32128444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 38147555 - 38147603
Alignment:
Q  2 gaacccgaaccttgtatatattatatattgtctctaacaactgagttaa 50  Q
    |||||||||||||| |||||||||| ||||||| || ||||||||||||    
T  38147555 gaacccgaaccttgcatatattataaattgtctttaccaactgagttaa 38147603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 180
Target Start/End: Complemental strand, 54083538 - 54083478
Alignment:
Q  120 cgtccatgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 180  Q
    ||||| ||||||||||||||||||||||  ||||||||| |||||||   |||||||||||    
T  54083538 cgtccctgagggggtgcaaacagctcaatagagctgggcatccctcagtcatgggcctcaa 54083478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 180
Target Start/End: Complemental strand, 23510917 - 23510887
Alignment:
Q  150 gagctgggcctccctcaaggatgggcctcaa 180  Q
    |||||||||||||||||||||||||||||||    
T  23510917 gagctgggcctccctcaaggatgggcctcaa 23510887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 180
Target Start/End: Original strand, 40089340 - 40089390
Alignment:
Q  130 ggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 180  Q
    ||||||||||||||||||  |||||||||||||||||   |||||||||||    
T  40089340 ggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaa 40089390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 50
Target Start/End: Complemental strand, 48171929 - 48171887
Alignment:
Q  8 gaaccttgtatatattatatattgtctctaacaactgagttaa 50  Q
    |||||||| |||||||||| |||||||||| ||||||||||||    
T  48171929 gaaccttgcatatattatacattgtctctaccaactgagttaa 48171887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 51298706 - 51298751
Alignment:
Q  5 cccgaaccttgtatatattatatattgtctctaacaactgagttaa 50  Q
    ||||||||||| |||||||||||||||||  || ||||||||||||    
T  51298706 cccgaaccttgcatatattatatattgtccttatcaactgagttaa 51298751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 166
Target Start/End: Complemental strand, 2791028 - 2790988
Alignment:
Q  126 tgagggggtgcaaacagctcaaacgagctgggcctccctca 166  Q
    ||||||||||||||||||||||  |||||||| ||||||||    
T  2791028 tgagggggtgcaaacagctcaacagagctgggtctccctca 2790988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 24540896 - 24540848
Alignment:
Q  3 aacccgaaccttgtatatattatatattgtctctaacaactgagttaaa 51  Q
    ||||||| ||||| |||||||||  |||||||||| |||||||||||||    
T  24540896 aacccgacccttgcatatattatgcattgtctctatcaactgagttaaa 24540848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 180
Target Start/End: Original strand, 51964204 - 51964240
Alignment:
Q  144 tcaaacgagctgggcctccctcaaggatgggcctcaa 180  Q
    |||||| |||| |||||||||||||||||||||||||    
T  51964204 tcaaacaagctaggcctccctcaaggatgggcctcaa 51964240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 88; Significance: 2e-42; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 114 - 216
Target Start/End: Complemental strand, 20003942 - 20003839
Alignment:
Q  114 caggggcgtccatgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaagagt-ggggtttctcatgattgattttggtgtt 212  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  20003942 caggggcgtccctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaagagtgggggttcctcatgattgattttggtgtt 20003843  T
Q  213 aggt 216  Q
    ||||    
T  20003842 aggt 20003839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 114 - 213
Target Start/End: Complemental strand, 37430367 - 37430267
Alignment:
Q  114 caggggcgtccatgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaagagt-ggggtttctcatgattgattttggtgtt 212  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||||| ||| ||||||||||||||||||| |||||| |||||||||||||||||||||    
T  37430367 caggggcgtccttgagggggtgcaaacagctcaaacgagttgggccttccttaaggatgggcctcaagagtgggggttcctcatgattgattttggtgtt 37430268  T
Q  213 a 213  Q
    |    
T  37430267 a 37430267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 114 - 179
Target Start/End: Complemental strand, 2952538 - 2952473
Alignment:
Q  114 caggggcgtccatgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 179  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2952538 caggggcgtccctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 2952473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 114 - 179
Target Start/End: Complemental strand, 5861061 - 5860996
Alignment:
Q  114 caggggcgtccatgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 179  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5861061 caggggcgtccctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 5860996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 114 - 179
Target Start/End: Original strand, 30883110 - 30883175
Alignment:
Q  114 caggggcgtccatgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 179  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  30883110 caggggcgtccctgagtgggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 30883175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 126 - 179
Target Start/End: Complemental strand, 3048827 - 3048774
Alignment:
Q  126 tgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 179  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3048827 tgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 3048774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 116 - 180
Target Start/End: Original strand, 41878167 - 41878231
Alignment:
Q  116 ggggcgtccatgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 180  Q
    ||||||||| ||||||||||||||||||||||||||| || |||||||||||||||| |||||||    
T  41878167 ggggcgtccttgagggggtgcaaacagctcaaacgagttgagcctccctcaaggatgagcctcaa 41878231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 126 - 180
Target Start/End: Original strand, 45472203 - 45472257
Alignment:
Q  126 tgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 180  Q
    |||||||||||||||||||||| ||||||||||| ||| ||||||||||||||||    
T  45472203 tgagggggtgcaaacagctcaaccgagctgggccacccccaaggatgggcctcaa 45472257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 120 - 180
Target Start/End: Original strand, 42600590 - 42600650
Alignment:
Q  120 cgtccatgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 180  Q
    ||||| ||||||||||||||||||||||  |||||||||||||||||   |||||||||||    
T  42600590 cgtccctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaa 42600650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 120 - 166
Target Start/End: Original strand, 10917200 - 10917246
Alignment:
Q  120 cgtccatgagggggtgcaaacagctcaaacgagctgggcctccctca 166  Q
    ||||| ||||||||||||||||||||||  |||||||||||||||||    
T  10917200 cgtccttgagggggtgcaaacagctcaacagagctgggcctccctca 10917246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 50
Target Start/End: Original strand, 40512645 - 40512685
Alignment:
Q  10 accttgtatatattatatattgtctctaacaactgagttaa 50  Q
    |||||||||||||||| ||||||||||| ||||||||||||    
T  40512645 accttgtatatattatgtattgtctctaccaactgagttaa 40512685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 162
Target Start/End: Complemental strand, 45294645 - 45294597
Alignment:
Q  114 caggggcgtccatgagggggtgcaaacagctcaaacgagctgggcctcc 162  Q
    ||||| ||||| |||||||||||||||||||| || |||||||||||||    
T  45294645 cagggccgtccttgagggggtgcaaacagctctaatgagctgggcctcc 45294597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 180
Target Start/End: Complemental strand, 23606909 - 23606855
Alignment:
Q  126 tgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 180  Q
    ||||||||||||||||||||||  ||| |||||||||||||   |||||||||||    
T  23606909 tgagggggtgcaaacagctcaacagagttgggcctccctcagtcatgggcctcaa 23606855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 10982777 - 10982732
Alignment:
Q  5 cccgaaccttgtatatattatatattgtctctaacaactgagttaa 50  Q
    ||||||||||| |||||||||||||||||  || ||||||||||||    
T  10982777 cccgaaccttgcatatattatatattgtccataccaactgagttaa 10982732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 59
Target Start/End: Complemental strand, 28084331 - 28084279
Alignment:
Q  7 cgaaccttgtatatattatatattgtctctaacaactgagttaaagtcacgag 59  Q
    ||||||||| |||||||||  |||||||||| ||||||||||||  |||||||    
T  28084331 cgaaccttgcatatattattcattgtctctatcaactgagttaagctcacgag 28084279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 86; Significance: 3e-41; HSPs: 12)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 113 - 217
Target Start/End: Complemental strand, 12596496 - 12596391
Alignment:
Q  113 tcaggggcgtccatgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaagagt-ggggtttctcatgattgattttggtgt 211  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| ||||||||||||||||||||    
T  12596496 tcaggggcgtccctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatggccctcaagagtgggggttcctcatgattgattttggtgt 12596397  T
Q  212 taggtg 217  Q
    ||||||    
T  12596396 taggtg 12596391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 114 - 217
Target Start/End: Original strand, 10955378 - 10955482
Alignment:
Q  114 caggggcgtccatgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaagagt-ggggtttctcatgattgattttggtgtt 212  Q
    ||||||||||| |||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  10955378 caggggcgtccttgagggggtgcaaatagctcaaacgagttgggcctccctcaaggatgggcctcaagagtgggggttcctcatgattgattttggtgtt 10955477  T
Q  213 aggtg 217  Q
    |||||    
T  10955478 aggtg 10955482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 112 - 179
Target Start/End: Complemental strand, 18777086 - 18777019
Alignment:
Q  112 atcaggggcgtccatgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 179  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  18777086 atcaggggcgtccctgaggaggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 18777019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 115 - 180
Target Start/End: Original strand, 28749582 - 28749647
Alignment:
Q  115 aggggcgtccatgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 180  Q
    |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28749582 aggggcgtctctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 28749647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 126 - 180
Target Start/End: Original strand, 29076942 - 29076998
Alignment:
Q  126 tgagggggtgcaaacagctcaaacgagctgggcct--ccctcaaggatgggcctcaa 180  Q
    ||||||||||||||||||| |||||||| ||||||  ||||||||||||||||||||    
T  29076942 tgagggggtgcaaacagcttaaacgagcagggcctccccctcaaggatgggcctcaa 29076998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 126 - 180
Target Start/End: Complemental strand, 47985256 - 47985202
Alignment:
Q  126 tgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 180  Q
    ||||||||||||||||||||||  |||||||||||||||||   |||||||||||    
T  47985256 tgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaa 47985202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 126 - 180
Target Start/End: Complemental strand, 48984131 - 48984077
Alignment:
Q  126 tgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 180  Q
    ||||||||||||||||||||||  |||||||||||||||||   |||||||||||    
T  48984131 tgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaa 48984077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 166
Target Start/End: Original strand, 19691909 - 19691949
Alignment:
Q  126 tgagggggtgcaaacagctcaaacgagctgggcctccctca 166  Q
    ||||||||||||||||||||||  |||||||||||||||||    
T  19691909 tgagggggtgcaaacagctcaacagagctgggcctccctca 19691949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 180
Target Start/End: Complemental strand, 20091565 - 20091514
Alignment:
Q  129 gggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 180  Q
    |||||||||||||||||||  |||||||||||||||||   |||||||||||    
T  20091565 gggggtgcaaacagctcaatagagctgggcctccctcagtcatgggcctcaa 20091514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 62
Target Start/End: Complemental strand, 3948098 - 3948048
Alignment:
Q  12 cttgtatatattatatattgtctctaacaactgagttaaagtcacgagaac 62  Q
    |||| |||||||||  |||||||||| ||||||||||||| ||||||||||    
T  3948098 cttgcatatattatgcattgtctctatcaactgagttaaactcacgagaac 3948048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 180
Target Start/End: Complemental strand, 23551359 - 23551305
Alignment:
Q  126 tgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 180  Q
    ||||||||||||||||||||||  ||| ||| ||||||||||  |||||||||||    
T  23551359 tgagggggtgcaaacagctcaatagagttggacctccctcaatcatgggcctcaa 23551305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 180
Target Start/End: Complemental strand, 24525972 - 24525918
Alignment:
Q  126 tgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 180  Q
    ||||||||||||||||||||||  ||||||||||||||| |   |||||||||||    
T  24525972 tgagggggtgcaaacagctcaacagagctgggcctcccttagtcatgggcctcaa 24525918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 85; Significance: 1e-40; HSPs: 20)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 114 - 217
Target Start/End: Original strand, 3406323 - 3406427
Alignment:
Q  114 caggggcgtccatgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaagagt-ggggtttctcatgattgattttggtgtt 212  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| |||||||||||||||||||||    
T  3406323 caggggcgtccttgagggggtgcaaacagctcaaacgagctgggcctcccccaaggatgggcctcaagagtgggggttcctcatgattgattttggtgtt 3406422  T
Q  213 aggtg 217  Q
    |||||    
T  3406423 aggtg 3406427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 114 - 217
Target Start/End: Complemental strand, 3440497 - 3440393
Alignment:
Q  114 caggggcgtccatgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaagagt-ggggtttctcatgattgattttggtgtt 212  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| |||||||||||||||||||||    
T  3440497 caggggcgtccttgagggggtgcaaacagctcaaacgagctgggcctcccccaaggatgggcctcaagagtgggggttcctcatgattgattttggtgtt 3440398  T
Q  213 aggtg 217  Q
    |||||    
T  3440397 aggtg 3440393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 114 - 217
Target Start/End: Original strand, 14146205 - 14146309
Alignment:
Q  114 caggggcgtccatgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaagagt-ggggtttctcatgattgattttggtgtt 212  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| |||||||||||    
T  14146205 caggggcgtccctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaagagtgggggttcctcatgattaattttggtgtt 14146304  T
Q  213 aggtg 217  Q
    |||||    
T  14146305 aggtg 14146309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 114 - 217
Target Start/End: Complemental strand, 41697345 - 41697241
Alignment:
Q  114 caggggcgtccatgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaagagt-ggggtttctcatgattgattttggtgtt 212  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| |||||||||||||||||||||    
T  41697345 caggggcgtccctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcatcaagagtgggggttcctcatgattgattttggtgtt 41697246  T
Q  213 aggtg 217  Q
    |||||    
T  41697245 aggtg 41697241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 113 - 213
Target Start/End: Original strand, 6888468 - 6888569
Alignment:
Q  113 tcaggggcgtccatgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaagagt-ggggtttctcatgattgattttggtgt 211  Q
    |||| ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||    
T  6888468 tcagaggcgtccctgagggggtgcaaacagctcaaacgagttgggcctccctcaaggatgggcctcaagagtgggggttcctcatgattgattttggtgt 6888567  T
Q  212 ta 213  Q
    ||    
T  6888568 ta 6888569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 126 - 217
Target Start/End: Original strand, 6771708 - 6771800
Alignment:
Q  126 tgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaagagt-ggggtttctcatgattgattttggtgttaggtg 217  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  6771708 tgagggggtgcaaacagctcaaacgagctgggcctcccttaaggatgggcctcaagagtgggggttcctcatgattgattttggtgttaggtg 6771800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 114 - 217
Target Start/End: Original strand, 16139960 - 16140064
Alignment:
Q  114 caggggcgtccatgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaagagt-ggggtttctcatgattgattttggtgtt 212  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||| || |||||| ||||||||||||||| |||||    
T  16139960 caggggcgtccttgagggggtgcaaacagctcaaacgagttgggcctccctcaaggatgggtctcaagcgtgggggttcctcatgattgattttagtgtt 16140059  T
Q  213 aggtg 217  Q
    |||||    
T  16140060 aggtg 16140064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 113 - 179
Target Start/End: Original strand, 44655538 - 44655604
Alignment:
Q  113 tcaggggcgtccatgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 179  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44655538 tcaggggcgtccctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 44655604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 114 - 179
Target Start/End: Complemental strand, 27907014 - 27906949
Alignment:
Q  114 caggggcgtccatgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 179  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27907014 caggggcgtccttgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 27906949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 126 - 180
Target Start/End: Complemental strand, 10912148 - 10912094
Alignment:
Q  126 tgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 180  Q
    ||||||||||| |||||||||||||||||||||||||  ||||||||||||||||    
T  10912148 tgagggggtgcgaacagctcaaacgagctgggcctcctccaaggatgggcctcaa 10912094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 114 - 160
Target Start/End: Original strand, 50880568 - 50880614
Alignment:
Q  114 caggggcgtccatgagggggtgcaaacagctcaaacgagctgggcct 160  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||    
T  50880568 caggggcgtccctgagggggtgcaaacagctcaaacgagctgggcct 50880614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 126 - 172
Target Start/End: Complemental strand, 5028028 - 5027982
Alignment:
Q  126 tgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatg 172  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||||    
T  5028028 tgagggggtgcaaacagctcaaccgagctgggcctcccccaaggatg 5027982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 126 - 180
Target Start/End: Original strand, 23181723 - 23181777
Alignment:
Q  126 tgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 180  Q
    |||||||||||||||||||||| ||||||||||| ||| ||| ||||||||||||    
T  23181723 tgagggggtgcaaacagctcaaccgagctgggccacccccaatgatgggcctcaa 23181777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 120 - 180
Target Start/End: Complemental strand, 13913776 - 13913716
Alignment:
Q  120 cgtccatgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 180  Q
    ||||| ||||||||||||||||||||||  |||||||||||||||||   |||||||||||    
T  13913776 cgtccctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaa 13913716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 120 - 180
Target Start/End: Complemental strand, 40502084 - 40502024
Alignment:
Q  120 cgtccatgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 180  Q
    ||||| ||||||||||||||||||||||  |||||||||||||||||   |||||||||||    
T  40502084 cgtccctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaa 40502024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 126 - 180
Target Start/End: Complemental strand, 1367165 - 1367111
Alignment:
Q  126 tgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 180  Q
    ||||||||||||||||||||||  |||||||||||||||||   |||||||||||    
T  1367165 tgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaa 1367111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 166
Target Start/End: Original strand, 44895479 - 44895519
Alignment:
Q  126 tgagggggtgcaaacagctcaaacgagctgggcctccctca 166  Q
    ||||||||||||||||||||||  |||||||||||||||||    
T  44895479 tgagggggtgcaaacagctcaacagagctgggcctccctca 44895519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 124 - 179
Target Start/End: Complemental strand, 51607729 - 51607674
Alignment:
Q  124 catgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 179  Q
    ||||||| ||||||||||||||||  ||||||||||| ||||||  ||||||||||    
T  51607729 catgaggtggtgcaaacagctcaatagagctgggccttcctcaatcatgggcctca 51607674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 180
Target Start/End: Complemental strand, 9173309 - 9173255
Alignment:
Q  126 tgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 180  Q
    ||||||||||||||||||||||  ||| |||||||||||||   |||||||||||    
T  9173309 tgagggggtgcaaacagctcaacagagttgggcctccctcagtcatgggcctcaa 9173255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 180
Target Start/End: Original strand, 27559459 - 27559513
Alignment:
Q  126 tgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 180  Q
    ||||||||||||||||||||||  ||||||| |||||||||   |||||||||||    
T  27559459 tgagggggtgcaaacagctcaacagagctggacctccctcagtcatgggcctcaa 27559513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 84; Significance: 5e-40; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 114 - 216
Target Start/End: Original strand, 7162677 - 7162780
Alignment:
Q  114 caggggcgtccatgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaagagt-ggggtttctcatgattgattttggtgtt 212  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| |||||||||||||||||||||    
T  7162677 caggggcgtccctgagggggtgcaaacagctcaaacgagctgggcctcccacaaggatgggcctcaagagtgggggttcctcatgattgattttggtgtt 7162776  T
Q  213 aggt 216  Q
    ||||    
T  7162777 aggt 7162780  T

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Target: chr2; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 126 - 217
Target Start/End: Original strand, 3952911 - 3953003
Alignment:
Q  126 tgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaagagt-ggggtttctcatgattgattttggtgttaggtg 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  3952911 tgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaagagtgggggttcctcatgattgattttggtgttaggtg 3953003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 113 - 179
Target Start/End: Original strand, 3155002 - 3155068
Alignment:
Q  113 tcaggggcgtccatgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 179  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3155002 tcaggggcgtccctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 3155068  T

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Target: chr2; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 112 - 179
Target Start/End: Original strand, 4505677 - 4505744
Alignment:
Q  112 atcaggggcgtccatgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 179  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  4505677 atcaggggcgtccctgagggggtgcaaacagctcaaacgagctgggcctccctcaatgatgggcctca 4505744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 116 - 179
Target Start/End: Original strand, 6964794 - 6964857
Alignment:
Q  116 ggggcgtccatgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 179  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6964794 ggggcgtccctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 6964857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 114 - 180
Target Start/End: Complemental strand, 12337755 - 12337689
Alignment:
Q  114 caggggcgtccatgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 180  Q
    ||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  12337755 caggggcgtccctgagggggtgcaaacagctcaaacgagctgagcctccctcaaggatgggcctcaa 12337689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 114 - 179
Target Start/End: Original strand, 34693147 - 34693212
Alignment:
Q  114 caggggcgtccatgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 179  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  34693147 caggggcgtccctgagggggtgcaaacagctcaaacgagttgggcctccctcaaggatgggcctca 34693212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 114 - 179
Target Start/End: Original strand, 34715559 - 34715624
Alignment:
Q  114 caggggcgtccatgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 179  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  34715559 caggggcgtccctgagggggtgcaaacagctcaaacgagttgggcctccctcaaggatgggcctca 34715624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 111 - 177
Target Start/End: Original strand, 3399506 - 3399572
Alignment:
Q  111 aatcaggggcgtccatgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcct 177  Q
    |||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  3399506 aatcaggggcgtccttgagggggtgcaaacagctcaaacgagttggacctccctcaaggatgggcct 3399572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 115 - 180
Target Start/End: Original strand, 40635963 - 40636028
Alignment:
Q  115 aggggcgtccatgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 180  Q
    |||||||||| | ||||||||||||||||||||||||| |||||||||||||||||||||| ||||    
T  40635963 aggggcgtccctaagggggtgcaaacagctcaaacgagttgggcctccctcaaggatgggcttcaa 40636028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 112 - 180
Target Start/End: Complemental strand, 41213996 - 41213928
Alignment:
Q  112 atcaggggcgtccatgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 180  Q
    ||||||||| ||| ||||||||||||||||||| |||||||||||| ||||||| ||||||||||||||    
T  41213996 atcaggggcatccttgagggggtgcaaacagcttaaacgagctgggtctccctcgaggatgggcctcaa 41213928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 118 - 179
Target Start/End: Complemental strand, 8907391 - 8907330
Alignment:
Q  118 ggcgtccatgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 179  Q
    ||||||| |||||||||||||||||||||||| |||||| |||||||||| |||||| ||||    
T  8907391 ggcgtccctgagggggtgcaaacagctcaaacaagctggacctccctcaaagatgggtctca 8907330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 120 - 180
Target Start/End: Complemental strand, 27507035 - 27506975
Alignment:
Q  120 cgtccatgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 180  Q
    ||||| ||||||||||||||||||||||  |||||||||||||||||   |||||||||||    
T  27507035 cgtccctgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaa 27506975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 126 - 180
Target Start/End: Original strand, 9045844 - 9045898
Alignment:
Q  126 tgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 180  Q
    ||||||||||||||||||||||  |||||||||||||||||   |||||||||||    
T  9045844 tgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaa 9045898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 126 - 180
Target Start/End: Original strand, 26715943 - 26715997
Alignment:
Q  126 tgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 180  Q
    ||||||||||||||||||||||  |||||||||||||||||   |||||||||||    
T  26715943 tgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaa 26715997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 116 - 161
Target Start/End: Complemental strand, 5952993 - 5952949
Alignment:
Q  116 ggggcgtccatgagggggtgcaaacagctcaaacgagctgggcctc 161  Q
    ||||||||| ||||||| ||||||||||||||||||||||||||||    
T  5952993 ggggcgtccctgagggg-tgcaaacagctcaaacgagctgggcctc 5952949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 180
Target Start/End: Original strand, 24410250 - 24410302
Alignment:
Q  128 agggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 180  Q
    ||||||||||||||||||||  |||||||||||||||||   |||||||||||    
T  24410250 agggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaa 24410302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 180
Target Start/End: Complemental strand, 10762853 - 10762799
Alignment:
Q  126 tgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 180  Q
    ||||||| ||||||||||||||  ||||||||| ||||||||  |||||||||||    
T  10762853 tgaggggatgcaaacagctcaacagagctgggcttccctcaatcatgggcctcaa 10762799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 59
Target Start/End: Complemental strand, 30243301 - 30243247
Alignment:
Q  5 cccgaaccttgtatatattatatattgtctctaacaactgagttaaagtcacgag 59  Q
    |||||||||||||||||||||  |||||||||| |||||||| |||  |||||||    
T  30243301 cccgaaccttgtatatattatgcattgtctctaccaactgagctaagttcacgag 30243247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 81; Significance: 3e-38; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 114 - 217
Target Start/End: Complemental strand, 24711208 - 24711104
Alignment:
Q  114 caggggcgtccatgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaagagt-ggggtttctcatgattgattttggtgtt 212  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| |||||| |||||||||||||||||||||    
T  24711208 caggggcgtccctgagggggtgcaaacagctcaaacaagctgggcctcccccaaggatgggcctcaagagtgggggttcctcatgattgattttggtgtt 24711109  T
Q  213 aggtg 217  Q
    |||||    
T  24711108 aggtg 24711104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 114 - 217
Target Start/End: Complemental strand, 30832732 - 30832629
Alignment:
Q  114 caggggcgtccatgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaagagt-ggggtttctcatgattgattttggtgtt 212  Q
    ||||||||||| ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  30832732 caggggcgtccttgagggg-tgcaaacagctcaaatgagctgggcctccctcaaggatgggcctcaagagtgggggttcctcatgattgattttggtgtt 30832634  T
Q  213 aggtg 217  Q
    |||||    
T  30832633 aggtg 30832629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 116 - 180
Target Start/End: Complemental strand, 23070953 - 23070889
Alignment:
Q  116 ggggcgtccatgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 180  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23070953 ggggcgtccttgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 23070889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 114 - 180
Target Start/End: Complemental strand, 12083706 - 12083640
Alignment:
Q  114 caggggcgtccatgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 180  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  12083706 caggggcgtccttgagggggtgcaaacagctcaaacgagctgggccttcctcaaggatgggcctcaa 12083640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 114 - 179
Target Start/End: Complemental strand, 13727715 - 13727650
Alignment:
Q  114 caggggcgtccatgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 179  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  13727715 caggggcgtccctgagggggtgcaaacagctcaaacgagctgggcctccctcaaagatgggcctca 13727650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 114 - 179
Target Start/End: Original strand, 21479284 - 21479349
Alignment:
Q  114 caggggcgtccatgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 179  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  21479284 caggggcgtccctgagggggtgcaaacagctaaaacgagctgggcctccctcaaggatgggcctca 21479349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 114 - 180
Target Start/End: Complemental strand, 19741289 - 19741223
Alignment:
Q  114 caggggcgtccatgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 180  Q
    ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  19741289 cagggacgtccctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatggacctcaa 19741223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 117 - 175
Target Start/End: Original strand, 21280336 - 21280394
Alignment:
Q  117 gggcgtccatgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggc 175  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21280336 gggcgtccctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggc 21280394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 114 - 171
Target Start/End: Complemental strand, 27314830 - 27314773
Alignment:
Q  114 caggggcgtccatgagggggtgcaaacagctcaaacgagctgggcctccctcaaggat 171  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  27314830 caggggcgtccctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggat 27314773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 111 - 179
Target Start/End: Original strand, 33773897 - 33773964
Alignment:
Q  111 aatcaggggcgtccatgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 179  Q
    |||||||||||||| |||||||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  33773897 aatcaggggcgtccctgagggggtgcaaaca-ctcaaatgagctgggcctccctcaaggatgggcctca 33773964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 114 - 171
Target Start/End: Complemental strand, 27579141 - 27579084
Alignment:
Q  114 caggggcgtccatgagggggtgcaaacagctcaaacgagctgggcctccctcaaggat 171  Q
    ||||||||||| | ||||||||||| ||||||||||||||||||||||||||||||||    
T  27579141 caggggcgtccctaagggggtgcaaccagctcaaacgagctgggcctccctcaaggat 27579084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 126 - 180
Target Start/End: Complemental strand, 1156071 - 1156017
Alignment:
Q  126 tgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 180  Q
    ||||||||||||||||||||||||||||| || |||||| |||||||||||||||    
T  1156071 tgagggggtgcaaacagctcaaacgagctaggtctcccttaaggatgggcctcaa 1156017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 128 - 180
Target Start/End: Original strand, 19986980 - 19987032
Alignment:
Q  128 agggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 180  Q
    ||||||||||||||||||||  ||||||||||||||||||  |||||||||||    
T  19986980 agggggtgcaaacagctcaacagagctgggcctccctcaattatgggcctcaa 19987032  T

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Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 126 - 180
Target Start/End: Original strand, 17353771 - 17353825
Alignment:
Q  126 tgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 180  Q
    ||||||||||||||||||||||  |||||||||||||||||   |||||||||||    
T  17353771 tgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaa 17353825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 17458417 - 17458363
Alignment:
Q  6 ccgaaccttgtatatattatatattgtctctaacaactgagttaaagtcacgaga 60  Q
    ||||||||||||||||||||||||| ||| || |||| |||||||| ||||||||    
T  17458417 ccgaaccttgtatatattatatattatctttatcaacagagttaaactcacgaga 17458363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 126 - 180
Target Start/End: Complemental strand, 27788976 - 27788922
Alignment:
Q  126 tgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 180  Q
    ||||||||||||||||||||||  |||||||||||||||||   |||||||||||    
T  27788976 tgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaa 27788922  T

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Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 50
Target Start/End: Complemental strand, 5954658 - 5954617
Alignment:
Q  9 aaccttgtatatattatatattgtctctaacaactgagttaa 50  Q
    ||||||| ||||||||||||||||||||||||||||| ||||    
T  5954658 aaccttgcatatattatatattgtctctaacaactgaattaa 5954617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 166
Target Start/End: Complemental strand, 235528 - 235473
Alignment:
Q  111 aatcaggggcgtccatgagggggtgcaaacagctcaaacgagctgggcctccctca 166  Q
    |||||||  ||||| ||||||||||||||||||| ||  |||||||||||||||||    
T  235528 aatcaggcccgtccctgagggggtgcaaacagcttaacagagctgggcctccctca 235473  T

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Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 180
Target Start/End: Complemental strand, 20712006 - 20711952
Alignment:
Q  126 tgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 180  Q
    ||||| ||||||||||||||||  |||||||||||||||||   |||||||||||    
T  20712006 tgaggaggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaa 20711952  T

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Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 62
Target Start/End: Original strand, 1918473 - 1918525
Alignment:
Q  10 accttgtatatattatatattgtctctaacaactgagttaaagtcacgagaac 62  Q
    |||||| |||||||||  ||||||| || ||||||||||||| ||||||||||    
T  1918473 accttgcatatattatgcattgtctataccaactgagttaaactcacgagaac 1918525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 50
Target Start/End: Complemental strand, 29283861 - 29283821
Alignment:
Q  10 accttgtatatattatatattgtctctaacaactgagttaa 50  Q
    |||||| |||||||||| |||||||||| ||||||||||||    
T  29283861 accttgcatatattatacattgtctctaccaactgagttaa 29283821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 78; Significance: 2e-36; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 113 - 217
Target Start/End: Original strand, 21582667 - 21582772
Alignment:
Q  113 tcaggggcgtccatgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaagagt-ggggtttctcatgattgattttggtgt 211  Q
    |||||||||||  ||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| |||||| ||||||||||||||||||||    
T  21582667 tcaggggcgtctctgagggggtgcaaacagctcaaacgagctgggcatcccttaaggatgggcctcaagagtgggggttcctcatgattgattttggtgt 21582766  T
Q  212 taggtg 217  Q
    ||||||    
T  21582767 taggtg 21582772  T

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Target: chr3; HSP #2
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 114 - 213
Target Start/End: Original strand, 42098698 - 42098798
Alignment:
Q  114 caggggcgtccatgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaagagt-ggggtttctcatgattgattttggtgtt 212  Q
    ||||||||||| ||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| |||||| |||||||||||||||||||||    
T  42098698 caggggcgtccctgagggggtgcaaacagctcaaacgagttgggcctcccacaaggatgggcctcaagagtgggggttcctcatgattgattttggtgtt 42098797  T
Q  213 a 213  Q
    |    
T  42098798 a 42098798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 114 - 217
Target Start/End: Original strand, 47467582 - 47467685
Alignment:
Q  114 caggggcgtccatgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaagagt-ggggtttctcatgattgattttggtgtt 212  Q
    ||||||||||| ||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  47467582 caggggcgtccctgagggg-tgcaaacagctcaaacgagctgagcctccctcaaggatgggcctcaagagtgggggttcctcatgattgattttggtgtt 47467680  T
Q  213 aggtg 217  Q
    |||||    
T  47467681 aggtg 47467685  T

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Target: chr3; HSP #4
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 114 - 217
Target Start/End: Complemental strand, 53149523 - 53149419
Alignment:
Q  114 caggggcgtccatgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaagagt-ggggtttctcatgattgattttggtgtt 212  Q
    ||||||||||| | |||||||||||||||||||||||||||||||||||  |||||||||||||||||||| |||||| |||||||||||||||||||||    
T  53149523 caggggcgtccctcagggggtgcaaacagctcaaacgagctgggcctccaccaaggatgggcctcaagagtgggggttcctcatgattgattttggtgtt 53149424  T
Q  213 aggtg 217  Q
    |||||    
T  53149423 aggtg 53149419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 112 - 188
Target Start/End: Complemental strand, 50258802 - 50258726
Alignment:
Q  112 atcaggggcgtccatgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaagagtgggg 188  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  50258802 atcaggggcgtccctgagggggtgcaaacagctcaaatgagctgggcctccctcaaggatgggcctcaagagtgggg 50258726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 111 - 179
Target Start/End: Complemental strand, 36716344 - 36716276
Alignment:
Q  111 aatcaggggcgtccatgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 179  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36716344 aatcaggggcgtccctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 36716276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 111 - 180
Target Start/End: Original strand, 13795184 - 13795253
Alignment:
Q  111 aatcaggggcgtccatgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 180  Q
    |||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  13795184 aatcaggggcgtccttgagggcgtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 13795253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 114 - 179
Target Start/End: Complemental strand, 38681413 - 38681348
Alignment:
Q  114 caggggcgtccatgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 179  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38681413 caggggcgtccctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 38681348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 115 - 180
Target Start/End: Complemental strand, 3954917 - 3954852
Alignment:
Q  115 aggggcgtccatgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 180  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  3954917 aggggcgtccctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatggacctcaa 3954852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 114 - 179
Target Start/End: Complemental strand, 27078884 - 27078819
Alignment:
Q  114 caggggcgtccatgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 179  Q
    ||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27078884 caggggcgttcctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 27078819  T

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Target: chr3; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 114 - 179
Target Start/End: Complemental strand, 27084681 - 27084616
Alignment:
Q  114 caggggcgtccatgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 179  Q
    ||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27084681 caggggcgttcctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 27084616  T

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Target: chr3; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 126 - 179
Target Start/End: Complemental strand, 54619507 - 54619454
Alignment:
Q  126 tgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 179  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54619507 tgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 54619454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 130 - 179
Target Start/End: Original strand, 36605862 - 36605911
Alignment:
Q  130 ggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 179  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36605862 ggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctca 36605911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 114 - 161
Target Start/End: Complemental strand, 29620665 - 29620618
Alignment:
Q  114 caggggcgtccatgagggggtgcaaacagctcaaacgagctgggcctc 161  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  29620665 caggggcgtccctgagggggtgcaaacagctcaaacgagctgggcctc 29620618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 126 - 180
Target Start/End: Complemental strand, 1148408 - 1148354
Alignment:
Q  126 tgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 180  Q
    ||||||||||| |||||||||||||||||||||||||| ||||||||||| ||||    
T  1148408 tgagggggtgcgaacagctcaaacgagctgggcctcccccaaggatgggcttcaa 1148354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 113 - 177
Target Start/End: Original strand, 18372032 - 18372095
Alignment:
Q  113 tcaggggcgtccatgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcct 177  Q
    |||||||||||  ||||||| ||||||||| |||||||||||||| |||||||||||||||||||    
T  18372032 tcaggggcgtctctgagggg-tgcaaacagttcaaacgagctggggctccctcaaggatgggcct 18372095  T

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Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 177
Target Start/End: Original strand, 48156954 - 48157005
Alignment:
Q  126 tgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcct 177  Q
    ||||||||||||||||||||||  ||||||||||||||||||  ||||||||    
T  48156954 tgagggggtgcaaacagctcaacagagctgggcctccctcaatcatgggcct 48157005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 126 - 180
Target Start/End: Complemental strand, 9878973 - 9878919
Alignment:
Q  126 tgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 180  Q
    ||||||||||||||||||||||  ||||||||||||||| ||  |||||||||||    
T  9878973 tgagggggtgcaaacagctcaacagagctgggcctcccttaatcatgggcctcaa 9878919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 126 - 180
Target Start/End: Complemental strand, 34290928 - 34290874
Alignment:
Q  126 tgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 180  Q
    ||||||||||||||||||||||  ||| ||||||||||||| | |||||||||||    
T  34290928 tgagggggtgcaaacagctcaacagagttgggcctccctcaggcatgggcctcaa 34290874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 126 - 180
Target Start/End: Complemental strand, 43207528 - 43207474
Alignment:
Q  126 tgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 180  Q
    ||||||||||||||||||||||  |||||||||||||||||   |||||||||||    
T  43207528 tgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaa 43207474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 126 - 180
Target Start/End: Original strand, 44708294 - 44708348
Alignment:
Q  126 tgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 180  Q
    ||||||||||||||||||||||  |||||||||||||||||   |||||||||||    
T  44708294 tgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaa 44708348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 126 - 180
Target Start/End: Complemental strand, 53507171 - 53507117
Alignment:
Q  126 tgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 180  Q
    ||||||||||||||||||||||  |||||||||||||||||   |||||||||||    
T  53507171 tgagggggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaa 53507117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 180
Target Start/End: Complemental strand, 50939528 - 50939468
Alignment:
Q  120 cgtccatgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 180  Q
    ||||| ||||| ||||||||||||||||  |||||||||||||||||   |||||||||||    
T  50939528 cgtccctgaggaggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaa 50939468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 52089363 - 52089323
Alignment:
Q  9 aaccttgtatatattatatattgtctctaacaactgagtta 49  Q
    ||||||| ||||||||||||||||||||| |||||||||||    
T  52089363 aaccttgcatatattatatattgtctctaccaactgagtta 52089323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 180
Target Start/End: Complemental strand, 8074133 - 8074087
Alignment:
Q  134 tgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 180  Q
    |||||||| ||||| ||||||||||||||  ||||||||||||||||    
T  8074133 tgcaaacaactcaatcgagctgggcctcctccaaggatgggcctcaa 8074087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 2078287 - 2078234
Alignment:
Q  9 aaccttgtatatattatatattgtctctaacaactgagttaaagtcacgagaac 62  Q
    ||||||| |||||||||  |||||||||| ||||||||||||  ||||||||||    
T  2078287 aaccttgcatatattatgcattgtctctaccaactgagttaagttcacgagaac 2078234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 59
Target Start/End: Complemental strand, 7824853 - 7824804
Alignment:
Q  10 accttgtatatattatatattgtctctaacaactgagttaaagtcacgag 59  Q
    |||||| ||||||||| |||||||| || ||||||||||||| |||||||    
T  7824853 accttgcatatattatgtattgtctatatcaactgagttaaactcacgag 7824804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 51
Target Start/End: Complemental strand, 8174316 - 8174275
Alignment:
Q  10 accttgtatatattatatattgtctctaacaactgagttaaa 51  Q
    |||||| ||||||||||||||||||||| |||||||| ||||    
T  8174316 accttgcatatattatatattgtctctaccaactgagctaaa 8174275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 114 - 163
Target Start/End: Original strand, 33426350 - 33426399
Alignment:
Q  114 caggggcgtccatgagggggtgcaaacagctcaaacgagctgggcctccc 163  Q
    ||||| |||||||| || ||||||||||||||||  ||||||||||||||    
T  33426350 cagggccgtccatggggaggtgcaaacagctcaatggagctgggcctccc 33426399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 162
Target Start/End: Complemental strand, 25373690 - 25373642
Alignment:
Q  114 caggggcgtccatgagggggtgcaaacagctcaaacgagctgggcctcc 162  Q
    ||||| || ||||||||||||||||||||||| |  |||||||||||||    
T  25373690 cagggccgaccatgagggggtgcaaacagctctactgagctgggcctcc 25373642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 48517721 - 48517669
Alignment:
Q  6 ccgaaccttgtatatattatatattgtctctaacaactgagttaaagtcacga 58  Q
    ||||||||||||||||||||  |||||  ||| ||||||||||||| ||||||    
T  48517721 ccgaaccttgtatatattatgcattgttcctatcaactgagttaaactcacga 48517669  T

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Target: scaffold0070 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 114 - 180
Target Start/End: Original strand, 1011 - 1077
Alignment:
Q  114 caggggcgtccatgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 180  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  1011 caggggcgtccctgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatggacctcaa 1077  T

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Target: scaffold0001 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 152 - 214
Target Start/End: Original strand, 181851 - 181914
Alignment:
Q  152 gctgggcctccctcaaggatgggcctcaagagt-ggggtttctcatgattgattttggtgttag 214  Q
    ||||||||||||||||||||||| ||||||||| |||||| |||||||||||||||||||||||    
T  181851 gctgggcctccctcaaggatgggtctcaagagtgggggttcctcatgattgattttggtgttag 181914  T

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Target: scaffold0001; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 114 - 159
Target Start/End: Original strand, 181435 - 181480
Alignment:
Q  114 caggggcgtccatgagggggtgcaaacagctcaaacgagctgggcc 159  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||    
T  181435 caggggcgtccctgagggggtgcaaacagctcaaacgagctgggcc 181480  T

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Target: scaffold0039 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 180
Target Start/End: Original strand, 106391 - 106445
Alignment:
Q  126 tgagggggtgcaaacagctcaaacgagctgggcctccctcaaggatgggcctcaa 180  Q
    |||| |||||||||||||||||  |||||||||||||||||   |||||||||||    
T  106391 tgagagggtgcaaacagctcaacagagctgggcctccctcagtcatgggcctcaa 106445  T

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Target: scaffold0045 (Bit Score: 29; Significance: 0.0000003; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 63905 - 63853
Alignment:
Q  13 ttgtatatattatatattgtctctaacaactgagttaaagtcacgagaaccat 65  Q
    |||||||||||||| |||||| ||| |||||||| |||| ||||||| |||||    
T  63905 ttgtatatattatacattgtccctaccaactgagctaaactcacgaggaccat 63853  T

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Target: scaffold0045; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 71237 - 71185
Alignment:
Q  13 ttgtatatattatatattgtctctaacaactgagttaaagtcacgagaaccat 65  Q
    |||||||||||||| |||||| ||| |||||||| |||| ||||||| |||||    
T  71237 ttgtatatattatacattgtccctaccaactgagctaaactcacgaggaccat 71185  T

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