View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3393_high_1 (Length: 721)

Name: NF3393_high_1
Description: NF3393
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3393_high_1
NF3393_high_1
[»] chr5 (51 HSPs)
chr5 (252-489)||(18728489-18728726)
chr5 (252-489)||(32087514-32087751)
chr5 (252-489)||(33256400-33256637)
chr5 (254-489)||(35395333-35395566)
chr5 (11-211)||(35395609-35395809)
chr5 (18-210)||(18728254-18728446)
chr5 (18-206)||(33256683-33256871)
chr5 (18-203)||(32087801-32087986)
chr5 (271-489)||(43317966-43318184)
chr5 (259-489)||(38177987-38178217)
chr5 (259-489)||(38205211-38205441)
chr5 (18-211)||(35292033-35292231)
chr5 (271-489)||(35292288-35292505)
chr5 (277-422)||(38597012-38597157)
chr5 (11-211)||(38177731-38177936)
chr5 (11-211)||(38204955-38205160)
chr5 (18-211)||(43317719-43317908)
chr5 (364-489)||(38596868-38596993)
chr5 (398-489)||(32089925-32090016)
chr5 (271-479)||(17574328-17574535)
chr5 (398-489)||(40330515-40330606)
chr5 (296-440)||(24496792-24496936)
chr5 (271-479)||(34327645-34327853)
chr5 (398-481)||(33257760-33257843)
chr5 (292-479)||(36057540-36057727)
chr5 (398-489)||(42619289-42619380)
chr5 (400-489)||(32835876-32835965)
chr5 (271-443)||(30468186-30468358)
chr5 (398-489)||(18726565-18726656)
chr5 (100-211)||(32838236-32838352)
chr5 (259-429)||(32838394-32838567)
chr5 (383-479)||(24541230-24541326)
chr5 (271-479)||(18624914-18625122)
chr5 (398-474)||(38176647-38176723)
chr5 (398-474)||(38203871-38203947)
chr5 (398-489)||(35291048-35291139)
chr5 (366-452)||(29621782-29621868)
chr5 (382-479)||(7267853-7267950)
chr5 (383-452)||(42473625-42473694)
chr5 (400-479)||(8541271-8541350)
chr5 (11-104)||(32836989-32837082)
chr5 (398-489)||(1344814-1344905)
chr5 (400-479)||(2852896-2852975)
chr5 (400-479)||(7269446-7269525)
chr5 (400-479)||(12738736-12738815)
chr5 (400-479)||(12801559-12801638)
chr5 (400-479)||(30463910-30463989)
chr5 (271-330)||(42620690-42620749)
chr5 (366-452)||(40780587-40780673)
chr5 (366-479)||(2854328-2854440)
chr5 (384-489)||(42620782-42620887)
[»] chr3 (76 HSPs)
chr3 (252-489)||(23888659-23888896)
chr3 (18-211)||(45898029-45898222)
chr3 (41-210)||(23888448-23888617)
chr3 (259-489)||(23774152-23774381)
chr3 (259-489)||(48633877-48634111)
chr3 (259-489)||(18430165-18430395)
chr3 (259-489)||(41020897-41021127)
chr3 (259-489)||(45257114-45257344)
chr3 (259-489)||(24382787-24383017)
chr3 (341-489)||(45898324-45898472)
chr3 (271-489)||(31887358-31887576)
chr3 (308-489)||(40508854-40509035)
chr3 (259-489)||(33113075-33113304)
chr3 (19-211)||(18429924-18430121)
chr3 (11-203)||(33112825-33113022)
chr3 (259-439)||(33852564-33852744)
chr3 (259-489)||(51454140-51454374)
chr3 (271-489)||(2977235-2977453)
chr3 (19-207)||(33852329-33852518)
chr3 (272-434)||(1845839-1846001)
chr3 (19-173)||(41020650-41020804)
chr3 (296-489)||(39641770-39641963)
chr3 (68-211)||(24382587-24382735)
chr3 (19-211)||(45256873-45257065)
chr3 (18-211)||(48634161-48634356)
chr3 (11-173)||(23774470-23774632)
chr3 (252-312)||(45898264-45898324)
chr3 (18-203)||(31887098-31887288)
chr3 (271-479)||(30599844-30600052)
chr3 (398-489)||(45897050-45897141)
chr3 (91-211)||(2977049-2977174)
chr3 (271-479)||(2226079-2226286)
chr3 (271-479)||(51684620-51684828)
chr3 (271-479)||(53190686-53190893)
chr3 (366-479)||(2660222-2660335)
chr3 (271-479)||(27899007-27899215)
chr3 (398-489)||(1847645-1847736)
chr3 (288-479)||(21348733-21348924)
chr3 (398-489)||(23887198-23887289)
chr3 (398-489)||(33111841-33111932)
chr3 (398-489)||(33850982-33851073)
chr3 (398-489)||(40508493-40508584)
chr3 (398-489)||(48635373-48635464)
chr3 (416-481)||(18428757-18428822)
chr3 (88-173)||(54093011-54093096)
chr3 (421-489)||(40998515-40998583)
chr3 (366-479)||(41977760-41977873)
chr3 (366-479)||(54898447-54898560)
chr3 (400-479)||(38193510-38193589)
chr3 (400-479)||(41979352-41979431)
chr3 (400-479)||(46308817-46308896)
chr3 (271-426)||(48830732-48830887)
chr3 (400-479)||(53094273-53094352)
chr3 (366-452)||(3152239-3152325)
chr3 (271-433)||(42279563-42279725)
chr3 (398-447)||(37865426-37865475)
chr3 (366-479)||(44794218-44794330)
chr3 (400-479)||(3150262-3150341)
chr3 (288-479)||(43765147-43765338)
chr3 (400-479)||(54900074-54900153)
chr3 (90-172)||(26449016-26449098)
chr3 (366-452)||(35905733-35905819)
chr3 (402-475)||(24381758-24381831)
chr3 (399-476)||(31885531-31885608)
chr3 (400-489)||(41944576-41944665)
chr3 (175-211)||(51454066-51454102)
chr3 (400-479)||(2661908-2661987)
chr3 (398-489)||(2975460-2975551)
chr3 (400-479)||(38191905-38191984)
chr3 (400-479)||(44795890-44795969)
chr3 (400-479)||(46310436-46310515)
chr3 (400-479)||(53187752-53187831)
chr3 (271-336)||(7884800-7884865)
chr3 (366-443)||(19987615-19987692)
chr3 (400-477)||(23291582-23291659)
chr3 (382-479)||(46112497-46112594)
[»] chr4 (66 HSPs)
chr4 (252-489)||(2827407-2827641)
chr4 (18-211)||(2827683-2827876)
chr4 (259-489)||(44558387-44558617)
chr4 (259-489)||(44794654-44794884)
chr4 (270-489)||(10372611-10372830)
chr4 (259-489)||(10762581-10762811)
chr4 (259-489)||(51041825-51042054)
chr4 (265-435)||(27624860-27625030)
chr4 (259-489)||(35996063-35996293)
chr4 (259-489)||(2350398-2350631)
chr4 (259-489)||(47941811-47942041)
chr4 (271-489)||(4519376-4519594)
chr4 (19-211)||(2350158-2350355)
chr4 (19-211)||(35996343-35996540)
chr4 (18-211)||(27625070-27625269)
chr4 (18-210)||(44558137-44558335)
chr4 (512-689)||(39607298-39607482)
chr4 (35-211)||(10372339-10372520)
chr4 (19-211)||(10762861-10763058)
chr4 (86-203)||(4519656-4519778)
chr4 (398-489)||(39923007-39923098)
chr4 (84-211)||(51041645-51041777)
chr4 (398-489)||(42879275-42879366)
chr4 (398-489)||(2828411-2828502)
chr4 (398-489)||(39085152-39085243)
chr4 (398-489)||(44992808-44992899)
chr4 (398-489)||(10371057-10371148)
chr4 (288-479)||(41761669-41761860)
chr4 (384-489)||(39083639-39083744)
chr4 (398-489)||(4520451-4520542)
chr4 (398-489)||(43778389-43778480)
chr4 (398-481)||(44792942-44793025)
chr4 (93-211)||(44794481-44794604)
chr4 (384-489)||(39921494-39921599)
chr4 (366-479)||(43519434-43519547)
chr4 (421-489)||(10767973-10768041)
chr4 (384-488)||(39189383-39189487)
chr4 (398-489)||(35997767-35997858)
chr4 (398-489)||(47942746-47942837)
chr4 (384-489)||(42880774-42880879)
chr4 (384-489)||(43779886-43779991)
chr4 (271-347)||(2693159-2693235)
chr4 (384-484)||(32652104-32652204)
chr4 (400-479)||(4173740-4173819)
chr4 (400-479)||(43507177-43507256)
chr4 (400-479)||(43508653-43508732)
chr4 (355-449)||(13450970-13451064)
chr4 (290-416)||(26296819-26296945)
chr4 (398-480)||(44556629-44556711)
chr4 (384-489)||(5484540-5484645)
chr4 (398-447)||(39190819-39190868)
chr4 (271-479)||(51011936-51012143)
chr4 (398-489)||(5486052-5486143)
chr4 (88-175)||(27382440-27382527)
chr4 (400-479)||(35401759-35401838)
chr4 (399-452)||(230473-230526)
chr4 (87-172)||(25993825-25993910)
chr4 (366-479)||(49523134-49523247)
chr4 (403-479)||(320903-320979)
chr4 (271-347)||(11255846-11255922)
chr4 (398-466)||(51040758-51040826)
chr4 (400-479)||(319283-319362)
chr4 (400-479)||(39345574-39345653)
chr4 (271-348)||(11601811-11601888)
chr4 (132-177)||(44972714-44972759)
chr4 (384-489)||(44994306-44994411)
[»] chr7 (62 HSPs)
chr7 (252-489)||(46996589-46996826)
chr7 (18-211)||(46996354-46996547)
chr7 (259-489)||(46812476-46812706)
chr7 (256-489)||(33038688-33038921)
chr7 (259-489)||(40784346-40784576)
chr7 (259-489)||(47341576-47341810)
chr7 (259-489)||(8423175-8423405)
chr7 (271-489)||(23953805-23954023)
chr7 (259-489)||(35344184-35344414)
chr7 (271-489)||(2167479-2167697)
chr7 (19-211)||(46812229-46812427)
chr7 (42-211)||(33038476-33038650)
chr7 (11-211)||(40784626-40784831)
chr7 (377-489)||(38613493-38613605)
chr7 (338-489)||(38614885-38615035)
chr7 (271-489)||(27955370-27955588)
chr7 (19-211)||(47341340-47341534)
chr7 (11-211)||(23954085-23954290)
chr7 (84-211)||(2167753-2167885)
chr7 (271-489)||(2492327-2492544)
chr7 (398-489)||(4321038-4321129)
chr7 (398-489)||(30108565-30108656)
chr7 (398-489)||(46994660-46994751)
chr7 (271-479)||(39859135-39859343)
chr7 (398-488)||(3690151-3690241)
chr7 (93-211)||(8423002-8423125)
chr7 (93-211)||(35344011-35344134)
chr7 (40-203)||(27955657-27955824)
chr7 (84-211)||(38613744-38613876)
chr7 (398-489)||(8421416-8421507)
chr7 (288-479)||(37796104-37796295)
chr7 (398-489)||(45465184-45465275)
chr7 (384-489)||(45463670-45463775)
chr7 (398-487)||(46810707-46810796)
chr7 (366-479)||(27666066-27666179)
chr7 (400-489)||(33775408-33775497)
chr7 (384-479)||(56340-56435)
chr7 (398-489)||(35342425-35342516)
chr7 (398-481)||(47339784-47339867)
chr7 (384-442)||(11682828-11682886)
chr7 (271-439)||(6602385-6602553)
chr7 (400-479)||(35403619-35403698)
chr7 (398-489)||(38614792-38614883)
chr7 (398-489)||(40785548-40785639)
chr7 (271-433)||(45359392-45359554)
chr7 (383-479)||(29996532-29996628)
chr7 (288-452)||(38474066-38474230)
chr7 (398-489)||(2168834-2168925)
chr7 (400-479)||(13169683-13169762)
chr7 (400-479)||(35401979-35402058)
chr7 (398-481)||(36762680-36762763)
chr7 (366-452)||(20478079-20478165)
chr7 (288-450)||(24228332-24228494)
chr7 (87-172)||(48704494-48704579)
chr7 (416-488)||(30109717-30109789)
chr7 (366-450)||(34776916-34777000)
chr7 (400-479)||(24226591-24226670)
chr7 (271-334)||(38613618-38613681)
chr7 (398-488)||(36756883-36756973)
chr7 (398-488)||(36766407-36766497)
chr7 (384-489)||(4322591-4322696)
chr7 (416-481)||(33037701-33037766)
[»] chr1 (62 HSPs)
chr1 (252-489)||(36895397-36895634)
chr1 (252-489)||(46638694-46638931)
chr1 (252-489)||(31801633-31801870)
chr1 (18-207)||(31801916-31802105)
chr1 (18-210)||(46638459-46638651)
chr1 (18-211)||(36895163-36895356)
chr1 (259-489)||(42134482-42134712)
chr1 (259-489)||(35479870-35480099)
chr1 (259-489)||(27940608-27940838)
chr1 (259-489)||(47269350-47269580)
chr1 (259-439)||(45380878-45381058)
chr1 (259-489)||(18183838-18184067)
chr1 (259-489)||(33685143-33685372)
chr1 (259-489)||(44157433-44157662)
chr1 (11-203)||(18183589-18183786)
chr1 (19-211)||(42134759-42134956)
chr1 (18-209)||(6575448-6575645)
chr1 (265-420)||(6575261-6575414)
chr1 (41-205)||(45380652-45380822)
chr1 (19-211)||(47269103-47269300)
chr1 (19-211)||(44158066-44158260)
chr1 (11-122)||(33682868-33682979)
chr1 (18-211)||(35479617-35479816)
chr1 (398-489)||(5784867-5784958)
chr1 (398-489)||(31803700-31803791)
chr1 (398-489)||(11152545-11152636)
chr1 (398-489)||(45379085-45379176)
chr1 (271-479)||(2869589-2869797)
chr1 (398-489)||(47264124-47264215)
chr1 (271-449)||(15104481-15104659)
chr1 (366-479)||(4855967-4856080)
chr1 (271-479)||(25278274-25278482)
chr1 (271-479)||(37344352-37344560)
chr1 (398-481)||(27952500-27952583)
chr1 (398-489)||(33679259-33679350)
chr1 (366-479)||(34778139-34778252)
chr1 (400-489)||(35478087-35478176)
chr1 (366-479)||(46583557-46583670)
chr1 (271-479)||(6818584-6818792)
chr1 (271-479)||(31238401-31238609)
chr1 (416-488)||(46636766-46636838)
chr1 (398-489)||(44159294-44159385)
chr1 (398-489)||(18180500-18180591)
chr1 (366-452)||(9121669-9121755)
chr1 (384-489)||(5783364-5783469)
chr1 (366-479)||(33602645-33602758)
chr1 (387-479)||(25278975-25279067)
chr1 (421-481)||(36894830-36894890)
chr1 (400-479)||(26223597-26223676)
chr1 (288-479)||(27087293-27087483)
chr1 (400-479)||(34776579-34776658)
chr1 (400-479)||(46582020-46582099)
chr1 (402-479)||(8167952-8168029)
chr1 (387-479)||(3013498-3013590)
chr1 (271-443)||(50556003-50556175)
chr1 (400-479)||(8169568-8169647)
chr1 (400-479)||(25276752-25276831)
chr1 (400-479)||(37345962-37346041)
chr1 (398-489)||(42136244-42136335)
chr1 (366-489)||(51121905-51122028)
chr1 (366-452)||(47013083-47013169)
chr1 (366-440)||(51896153-51896227)
[»] chr2 (53 HSPs)
chr2 (11-206)||(29909307-29909502)
chr2 (252-489)||(29909547-29909784)
chr2 (18-211)||(39050-39243)
chr2 (252-489)||(39284-39521)
chr2 (252-489)||(92234-92470)
chr2 (18-211)||(91999-92193)
chr2 (259-489)||(37417273-37417503)
chr2 (259-489)||(15372499-15372729)
chr2 (259-489)||(41706539-41706769)
chr2 (18-207)||(42001893-42002086)
chr2 (259-488)||(25619661-25619890)
chr2 (259-489)||(15432328-15432558)
chr2 (287-485)||(42879360-42879557)
chr2 (259-489)||(42001610-42001839)
chr2 (18-211)||(37417558-37417756)
chr2 (42-211)||(15432606-15432779)
chr2 (11-211)||(42879595-42879801)
chr2 (93-211)||(39803-39926)
chr2 (398-489)||(11021533-11021624)
chr2 (364-485)||(39560-39681)
chr2 (271-479)||(40560233-40560441)
chr2 (398-489)||(28248175-28248266)
chr2 (110-211)||(25619943-25620049)
chr2 (400-489)||(41144-41233)
chr2 (398-489)||(33193-33284)
chr2 (271-479)||(39664674-39664882)
chr2 (384-489)||(361445-361550)
chr2 (93-210)||(15372780-15372902)
chr2 (271-452)||(19908172-19908353)
chr2 (93-211)||(41706819-41706933)
chr2 (271-479)||(14389010-14389218)
chr2 (398-489)||(15373888-15373979)
chr2 (398-489)||(41708430-41708521)
chr2 (366-479)||(16763086-16763199)
chr2 (271-479)||(17696216-17696424)
chr2 (398-489)||(42880811-42880902)
chr2 (366-452)||(24208063-24208149)
chr2 (384-485)||(11023032-11023132)
chr2 (271-479)||(44709671-44709879)
chr2 (400-479)||(16764611-16764690)
chr2 (91-177)||(4416683-4416769)
chr2 (366-452)||(6786002-6786088)
chr2 (384-489)||(28246663-28246768)
chr2 (400-479)||(14387359-14387438)
chr2 (384-489)||(38148495-38148601)
chr2 (416-489)||(37418787-37418860)
chr2 (271-443)||(6797553-6797725)
chr2 (271-335)||(10716809-10716873)
chr2 (366-426)||(11315336-11315396)
chr2 (93-172)||(11315070-11315149)
chr2 (398-489)||(17948927-17949018)
chr2 (366-440)||(16377218-16377292)
chr2 (382-479)||(2766944-2767041)
[»] chr8 (72 HSPs)
chr8 (259-489)||(42897668-42897898)
chr8 (258-489)||(31821418-31821640)
chr8 (18-211)||(31821687-31821881)
chr8 (18-211)||(33750036-33750229)
chr8 (252-452)||(33750271-33750471)
chr8 (259-489)||(37525917-37526147)
chr8 (259-489)||(33160042-33160272)
chr8 (259-489)||(32822361-32822590)
chr8 (259-489)||(462266-462494)
chr8 (259-489)||(31201037-31201267)
chr8 (259-489)||(38882691-38882921)
chr8 (259-489)||(1320617-1320847)
chr8 (259-489)||(8654500-8654729)
chr8 (19-173)||(8654820-8654973)
chr8 (11-211)||(42897412-42897617)
chr8 (11-159)||(37525666-37525814)
chr8 (54-211)||(32822641-32822803)
chr8 (288-489)||(9184383-9184584)
chr8 (398-481)||(31823476-31823559)
chr8 (398-489)||(33748332-33748423)
chr8 (384-489)||(25373608-25373713)
chr8 (271-443)||(41825570-41825742)
chr8 (398-489)||(40019156-40019247)
chr8 (384-489)||(25707287-25707392)
chr8 (366-479)||(27691164-27691277)
chr8 (271-479)||(8609714-8609921)
chr8 (271-479)||(13108263-13108470)
chr8 (398-474)||(24526911-24526987)
chr8 (94-211)||(38882517-38882639)
chr8 (366-479)||(13282488-13282601)
chr8 (271-479)||(38547238-38547445)
chr8 (271-443)||(5036491-5036667)
chr8 (398-489)||(31199485-31199576)
chr8 (386-483)||(28433737-28433834)
chr8 (93-211)||(31200873-31200987)
chr8 (299-479)||(26242268-26242448)
chr8 (398-481)||(461184-461267)
chr8 (113-211)||(462111-462214)
chr8 (398-489)||(32824271-32824362)
chr8 (87-172)||(11721481-11721566)
chr8 (271-443)||(9673091-9673263)
chr8 (288-348)||(11722732-11722792)
chr8 (416-488)||(38881429-38881501)
chr8 (398-466)||(42894799-42894867)
chr8 (400-479)||(601704-601783)
chr8 (382-489)||(5075368-5075475)
chr8 (400-479)||(26238736-26238815)
chr8 (400-479)||(27692837-27692916)
chr8 (400-479)||(29239187-29239266)
chr8 (398-489)||(33368759-33368850)
chr8 (400-479)||(33762713-33762792)
chr8 (408-479)||(34681074-34681145)
chr8 (400-479)||(38548831-38548910)
chr8 (400-479)||(42943426-42943505)
chr8 (90-172)||(9184712-9184794)
chr8 (400-478)||(13283995-13284073)
chr8 (398-447)||(1322314-1322363)
chr8 (400-477)||(13106816-13106893)
chr8 (366-443)||(33708825-33708902)
chr8 (384-489)||(40020654-40020759)
chr8 (366-479)||(42941784-42941897)
chr8 (400-452)||(15308261-15308313)
chr8 (400-452)||(15488630-15488682)
chr8 (175-211)||(33159959-33159995)
chr8 (400-479)||(29237161-29237240)
chr8 (400-479)||(33707216-33707295)
chr8 (400-479)||(33761079-33761158)
chr8 (400-479)||(35509224-35509303)
chr8 (366-440)||(15305846-15305920)
chr8 (366-440)||(15486215-15486289)
chr8 (398-480)||(23811565-23811647)
chr8 (398-435)||(33158710-33158747)
[»] chr6 (31 HSPs)
chr6 (271-474)||(3018338-3018541)
chr6 (259-489)||(29077328-29077558)
chr6 (259-489)||(29112300-29112530)
chr6 (259-489)||(4641355-4641585)
chr6 (255-489)||(2968139-2968373)
chr6 (19-173)||(29077651-29077805)
chr6 (19-173)||(29112623-29112777)
chr6 (398-489)||(17950561-17950652)
chr6 (430-489)||(3018528-3018587)
chr6 (83-210)||(4641636-4641768)
chr6 (271-481)||(20523374-20523584)
chr6 (68-173)||(30641032-30641134)
chr6 (398-489)||(29114776-29114867)
chr6 (398-489)||(30639611-30639702)
chr6 (93-211)||(2968405-2968528)
chr6 (384-489)||(17952061-17952166)
chr6 (366-477)||(13613583-13613694)
chr6 (416-489)||(35174391-35174464)
chr6 (288-452)||(32439015-32439178)
chr6 (90-177)||(25171826-25171913)
chr6 (366-452)||(3456785-3456871)
chr6 (271-481)||(10568407-10568617)
chr6 (377-489)||(24662480-24662592)
chr6 (400-479)||(32518497-32518576)
chr6 (366-479)||(32516887-32517000)
chr6 (384-489)||(35175882-35175987)
chr6 (271-479)||(6899495-6899703)
chr6 (398-489)||(4646216-4646307)
chr6 (271-342)||(11355369-11355440)
chr6 (366-452)||(32455892-32455978)
chr6 (366-443)||(7372959-7373036)
[»] scaffold0477 (1 HSPs)
scaffold0477 (259-489)||(6528-6758)
[»] scaffold0058 (3 HSPs)
scaffold0058 (366-479)||(3304-3417)
scaffold0058 (366-479)||(4476-4589)
scaffold0058 (400-479)||(14343-14422)
[»] scaffold1041 (1 HSPs)
scaffold1041 (384-466)||(2121-2203)
[»] scaffold0129 (1 HSPs)
scaffold0129 (267-394)||(4554-4681)
[»] scaffold1454 (1 HSPs)
scaffold1454 (271-336)||(1415-1480)


Alignment Details
Target: chr5 (Bit Score: 190; Significance: 1e-103; HSPs: 51)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 252 - 489
Target Start/End: Original strand, 18728489 - 18728726
Alignment:
Q  252 ctcaacattttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaa 351  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||  |||||||||| ||    
T  18728489 ctcaacattttccaattcaatcaaattagtcccttaacacgtggcttccttcttgccacgtgtacaagacaacacagcatgcaaggtgacagatcagcaa 18728588  T
Q  352 ggctaacagaggacttggacggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccg 451  Q
    ||||||||||| |||||||||||| ||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||    
T  18728589 ggctaacagagcacttggacggagggacctttttgatggacgtctgacaaattcagggactaagttgatatttcgcataattaagggacgaagttggccg 18728688  T
Q  452 acgtgtgaaaattcagggacgaatttgatggttcactc 489  Q
    ||  ||||||||||||||||||||||||||||||||||    
T  18728689 acaagtgaaaattcagggacgaatttgatggttcactc 18728726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 182; E-Value: 5e-98
Query Start/End: Original strand, 252 - 489
Target Start/End: Complemental strand, 32087751 - 32087514
Alignment:
Q  252 ctcaacattttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaa 351  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| ||    
T  32087751 ctcaacattttccaattcaatcaaattagtccctgaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaaggcgatagatcagcaa 32087652  T
Q  352 ggctaacagaggacttggacggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccg 451  Q
    ||||||||||| |||||||||||| ||| |||||||||||||||||| ||||| | |||||||||||||||||||||||||| |||||||||||||  ||    
T  32087651 ggctaacagagcacttggacggagggacctttttgatggacgtctgaaaaattaagggactaagttgatatttcgcataattaagggacgaagttgatcg 32087552  T
Q  452 acgtgtgaaaattcagggacgaatttgatggttcactc 489  Q
    ||| ||||||||||||||||||||||||||||||||||    
T  32087551 acgcgtgaaaattcagggacgaatttgatggttcactc 32087514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 182; E-Value: 5e-98
Query Start/End: Original strand, 252 - 489
Target Start/End: Complemental strand, 33256637 - 33256400
Alignment:
Q  252 ctcaacattttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaa 351  Q
    ||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||  |||||||||| ||    
T  33256637 ctcaacatttttcaattcaatcaaattagtccctgaacacgtggcttccttcttgccactcgtacaagacaacacagcatgcaaggtgacagatcagcaa 33256538  T
Q  352 ggctaacagaggacttggacggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccg 451  Q
    ||||||| |||||||||||||||| ||| ||||||||||||||||||||||||||| || |||||||||||||||||||||||| ||| |||||||||||    
T  33256537 ggctaacggaggacttggacggagggacttttttgatggacgtctgacaaattcaaagattaagttgatatttcgcataattgaaggatgaagttggccg 33256438  T
Q  452 acgtgtgaaaattcagggacgaatttgatggttcactc 489  Q
    |||||| |||||||||||||||||||||||||||||||    
T  33256437 acgtgtaaaaattcagggacgaatttgatggttcactc 33256400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 165; E-Value: 7e-88
Query Start/End: Original strand, 254 - 489
Target Start/End: Complemental strand, 35395566 - 35395333
Alignment:
Q  254 caacattttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaagg 353  Q
    |||| ||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||  |||||||| ||||| ||||| | ||    
T  35395566 caactttttccaattcaatcaaattagtccctgaacatgtggcttccttcttgccacgcgtacaagacaacac--catgcaaggcgacatatcagcatgg 35395469  T
Q  354 ctaacagaggacttggacggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgac 453  Q
    ||||||||| |||||||||||| ||| |||||||||||||||| ||||||||| | ||||| ||||||||||||||||||||||||||||||||||||||    
T  35395468 ctaacagagcacttggacggagggacctttttgatggacgtctaacaaattcaggaactaaattgatatttcgcataattgagggacgaagttggccgac 35395369  T
Q  454 gtgtgaaaattcagggacgaatttgatggttcactc 489  Q
    ||||||||||||||||| ||||||||||||||||||    
T  35395368 gtgtgaaaattcagggatgaatttgatggttcactc 35395333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 165; E-Value: 7e-88
Query Start/End: Original strand, 11 - 211
Target Start/End: Complemental strand, 35395809 - 35395609
Alignment:
Q  11 cacagatacttgataaacaacaggaaagatgttacctttaatcacaatcgaacacacaaacttcaaaaatgtcagaatcgccggagatgatgatgatttt 110  Q
    |||||| ||||||||||||||| |||||  ||||||||||||||||  |||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  35395809 cacagaaacttgataaacaacaagaaaggcgttacctttaatcacagccgaacacacaaacttcaaaaatgtcagaatcgtcggagatgatgatgatttt 35395710  T
Q  111 ggaggggtgaaaatggaggaagttttagcgagaagaagaagggtcaaggacgtttttgatgttctgaaatgtgaagaaggaggtatgggtaatgcagggg 210  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  35395709 ggaggggtgaaaatggaggaagttttagcgggaagaagaagggtcaaggacgtgtttgatgttctgaaatgtgaagaaggaggtatgggtaatgcagggg 35395610  T
Q  211 c 211  Q
    |    
T  35395609 c 35395609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 161; E-Value: 2e-85
Query Start/End: Original strand, 18 - 210
Target Start/End: Original strand, 18728254 - 18728446
Alignment:
Q  18 acttgataaacaacaggaaagatgttacctttaatcacaatcgaacacacaaacttcaaaaatgtcagaatcgccggagatgatgatgattttggagggg 117  Q
    |||||||||||||||||||||   |||||||||||||||  |||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  18728254 acttgataaacaacaggaaaggcattacctttaatcacagccgaacacacaaacttcaaaaatggtagaatcgccggagatgatgatgattttggagggg 18728353  T
Q  118 tgaaaatggaggaagttttagcgagaagaagaagggtcaaggacgtttttgatgttctgaaatgtgaagaaggaggtatgggtaatgcagggg 210  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18728354 tgaaaatggaggaagttttagcgagaagaagaagggtcaaagacgtttttgatgttctgaaatgtgaagaaggaggtatgggtaatgcagggg 18728446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 157; E-Value: 4e-83
Query Start/End: Original strand, 18 - 206
Target Start/End: Complemental strand, 33256871 - 33256683
Alignment:
Q  18 acttgataaacaacaggaaagatgttacctttaatcacaatcgaacacacaaacttcaaaaatgtcagaatcgccggagatgatgatgattttggagggg 117  Q
    |||||||||||||||||||||  ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  33256871 acttgataaacaacaggaaaggcgttacctttaatcacaaccgaacacacaaacttcaaaaatgtcaaaatcgccggagatgatgatgattttggagggg 33256772  T
Q  118 tgaaaatggaggaagttttagcgagaagaagaagggtcaaggacgtttttgatgttctgaaatgtgaagaaggaggtatgggtaatgca 206  Q
    ||||||||||||||||||||| |||||||||||| ||||||| |||||||||||||||| |||||||||||||||||||||||||||||    
T  33256771 tgaaaatggaggaagttttagtgagaagaagaagtgtcaaggtcgtttttgatgttctggaatgtgaagaaggaggtatgggtaatgca 33256683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 154; E-Value: 3e-81
Query Start/End: Original strand, 18 - 203
Target Start/End: Complemental strand, 32087986 - 32087801
Alignment:
Q  18 acttgataaacaacaggaaagatgttacctttaatcacaatcgaacacacaaacttcaaaaatgtcagaatcgccggagatgatgatgattttggagggg 117  Q
    ||||||||||||||||||||| |||||||||||||||||  |||||||||||||||||||||||  | |||||| |||||||||||||||||||||||||    
T  32087986 acttgataaacaacaggaaaggtgttacctttaatcacagccgaacacacaaacttcaaaaatggtataatcgctggagatgatgatgattttggagggg 32087887  T
Q  118 tgaaaatggaggaagttttagcgagaagaagaagggtcaaggacgtttttgatgttctgaaatgtgaagaaggaggtatgggtaat 203  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32087886 tggaaatggaggaagttttagcgagaagaagaagggtcaaggacgtttttgatgttctgaaatgtgaagaaggaggtatgggtaat 32087801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 271 - 489
Target Start/End: Original strand, 43317966 - 43318184
Alignment:
Q  271 atcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaaggctaacagaggacttgga 370  Q
    ||||||||||||| | |||||||||||||||| |||||||  |||||||||| |||| |||||  | ||||| ||| | | ||||||||||| |||||||    
T  43317966 atcaaattagtccttgaacacgtggcttcctttttgccacatgtacaagacagcacaacatgctgggcgacatatcggcatggctaacagagcacttgga 43318065  T
Q  371 cggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcaggga 470  Q
    ||||| ||| ||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||  |||||||||   | |||||||| |||    
T  43318066 cggagggaccttttttatggacgtctgacaaattcagggactaagttgatatttcgcataattgagggatgattttggccgacccataaaaattcaagga 43318165  T
Q  471 cgaatttgatggttcactc 489  Q
    |||||||||||||||||||    
T  43318166 cgaatttgatggttcactc 43318184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 259 - 489
Target Start/End: Original strand, 38177987 - 38178217
Alignment:
Q  259 ttttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaaggctaac 358  Q
    |||| ||| |||||||| ||||||| | |||||||| ||||||| |||| ||| |||||||||||||||||||||| ||||||| ||||| | |||||||    
T  38177987 tttttcaaatcaatcaagttagtccttgaacacgtgacttcctttttgctacgtgtacaagacaacacagcatgcaggacgacatatcagcatggctaac 38178086  T
Q  359 agaggacttggacggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtg 458  Q
     ||| || |||||| || ||| ||||||||||||||||||||||||||   ||||| |||||||||||||||||||||||| ||| ||| |||||  |||    
T  38178087 ggagcacatggacgaagggacctttttgatggacgtctgacaaattcagatactaaattgatatttcgcataattgagggatgaatttgaccgacccgtg 38178186  T
Q  459 aaaattcagggacgaatttgatggttcactc 489  Q
    |||||| | ||||||||||||| ||||||||    
T  38178187 aaaatttaaggacgaatttgatagttcactc 38178217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 259 - 489
Target Start/End: Original strand, 38205211 - 38205441
Alignment:
Q  259 ttttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaaggctaac 358  Q
    |||| ||| |||||||| ||||||| | |||||||| ||||||| |||| ||| |||||||||||||||||||||| ||||||| ||||| | |||||||    
T  38205211 tttttcaaatcaatcaagttagtccttgaacacgtgacttcctttttgctacgtgtacaagacaacacagcatgcaggacgacatatcagcatggctaac 38205310  T
Q  359 agaggacttggacggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtg 458  Q
     ||| || |||||| || ||| ||||||||||||||||||||||||||   ||||| |||||||||||||||||||||||| ||| ||| |||||  |||    
T  38205311 ggagcacatggacgaagggacctttttgatggacgtctgacaaattcagatactaaattgatatttcgcataattgagggatgaatttgaccgacccgtg 38205410  T
Q  459 aaaattcagggacgaatttgatggttcactc 489  Q
    |||||| | ||||||||||||| ||||||||    
T  38205411 aaaatttaaggacgaatttgatagttcactc 38205441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 18 - 211
Target Start/End: Original strand, 35292033 - 35292231
Alignment:
Q  18 acttgataaacaacaggaaagatgttacctttaatcacaatcgaacacacaaacttcaaaaatgtcagaatcgccggagatgatgatgattttggagggg 117  Q
    ||||||||||| | ||||||| | |||||||||| ||||  |||||||| |||||| ||||| || ||||||||||||||||||||||||||||||| ||    
T  35292033 acttgataaactagaggaaaggttttacctttaaccacagccgaacacagaaactttaaaaacgtgagaatcgccggagatgatgatgattttggagagg 35292132  T
Q  118 tgaaaatggaggaagttttagcgagaagaagaagggtcaaggacgtttttgatgtt-ctga----aatgtgaagaaggaggtatgggtaatgcaggggc 211  Q
    ||| ||||||| ||||||||| | |||| |||||| ||||||| |||||||||||| ||||    ||||||| |||||||||||||||||| |||||||    
T  35292133 tgagaatggagaaagttttagggggaaggagaaggatcaaggatgtttttgatgtttctgagtggaatgtgaggaaggaggtatgggtaatacaggggc 35292231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 271 - 489
Target Start/End: Original strand, 35292288 - 35292505
Alignment:
Q  271 atcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaaggctaacagaggacttgga 370  Q
    ||||||||||||| | ||||||| |||||||| |||||||| |||||||||| |||| ||||   | ||||||||||| |  |||||| ||| | |||||    
T  35292288 atcaaattagtccttgaacacgtagcttcctttttgccacgtgtacaagacagcacaacatgttgggcgacagatcagaatagctaacggagcatttgga 35292387  T
Q  371 cggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcaggga 470  Q
    |||||  || ||||| |||||||||||||||||||| |||||||||||||||||||||||||||| ||| ||  |||||| ||   | |||||||| |||    
T  35292388 cggaggaaccttttttatggacgtctgacaaattcagggactaagttgatatttcgcataattgaaggatgattttggcc-acccataaaaattcaagga 35292486  T
Q  471 cgaatttgatggttcactc 489  Q
    |||||||||||||||||||    
T  35292487 cgaatttgatggttcactc 35292505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 277 - 422
Target Start/End: Complemental strand, 38597157 - 38597012
Alignment:
Q  277 ttagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaaggctaacagaggacttggacggagt 376  Q
    ||||||| | |||||| |||||||||||||||||| |||||||||||||||||||||| | ||||||||||| | ||||||| ||  |||||||| |||     
T  38597157 ttagtccttgaacacgcggcttccttcttgccacgtgtacaagacaacacagcatgcagggcgacagatcagcacggctaacggaacacttggacagagg 38597058  T
Q  377 gacatttttgatggacgtctgacaaattcaaggactaagttgatat 422  Q
    ||| |||||||||||||||||||||||| | |||||||||||||||    
T  38597057 gacctttttgatggacgtctgacaaattaagggactaagttgatat 38597012  T

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Target: chr5; HSP #15
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 11 - 211
Target Start/End: Original strand, 38177731 - 38177936
Alignment:
Q  11 cacagatacttgataaacaacaggaaagatgttacctttaatcacaatcgaacacacaaacttcaaaaatgtcagaatcgccggagatgatgatgatttt 110  Q
    |||||| ||||||||||  | ||||||| |||||||||||| ||||| ||||||||  ||||||||||| || ||||||  || ||||||||||| ||||    
T  38177731 cacagaaacttgataaattagaggaaaggtgttacctttaaccacaaccgaacacaacaacttcaaaaacgtgagaatcatcgaagatgatgatggtttt 38177830  T
Q  111 ggaggggtgaaaatggaggaagttttagcgagaagaagaagggtcaaggacgtttttgatg-ttct----gaaatgtgaagaaggaggtatgggtaatgc 205  Q
    |||| ||||| ||||||| ||||||||||  |||| ||||| ||||||||||||||| ||| ||||    ||||||||| |||||| |||||||||||||    
T  38177831 ggagaggtgagaatggagaaagttttagcaggaaggagaagagtcaaggacgttttttatgtttctgagagaaatgtgaggaaggaagtatgggtaatgc 38177930  T
Q  206 aggggc 211  Q
    ||||||    
T  38177931 aggggc 38177936  T

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Target: chr5; HSP #16
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 11 - 211
Target Start/End: Original strand, 38204955 - 38205160
Alignment:
Q  11 cacagatacttgataaacaacaggaaagatgttacctttaatcacaatcgaacacacaaacttcaaaaatgtcagaatcgccggagatgatgatgatttt 110  Q
    |||||| ||||||||||  | ||||||| |||||||||||| ||||| ||||||||  ||||||||||| || ||||||  || ||||||||||| ||||    
T  38204955 cacagaaacttgataaattagaggaaaggtgttacctttaaccacaaccgaacacaacaacttcaaaaacgtgagaatcatcgaagatgatgatggtttt 38205054  T
Q  111 ggaggggtgaaaatggaggaagttttagcgagaagaagaagggtcaaggacgtttttgatg-ttct----gaaatgtgaagaaggaggtatgggtaatgc 205  Q
    |||| ||||| ||||||| ||||||||||  |||| ||||| ||||||||||||||| ||| ||||    ||||||||| |||||| |||||||||||||    
T  38205055 ggagaggtgagaatggagaaagttttagcaggaaggagaagagtcaaggacgttttttatgtttctgagagaaatgtgaggaaggaagtatgggtaatgc 38205154  T
Q  206 aggggc 211  Q
    ||||||    
T  38205155 aggggc 38205160  T

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Target: chr5; HSP #17
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 18 - 211
Target Start/End: Original strand, 43317719 - 43317908
Alignment:
Q  18 acttgataaacaacaggaaagatgttacctttaatcacaatcgaacacacaaacttcaaaaatgtcagaatcgccggagatgatgatgattttggagggg 117  Q
    ||||||||||| | ||||||| |||||||||||| ||||| |||||||| ||| ||||||||    ||||||||||||||||||||||||||||| | ||    
T  43317719 acttgataaactagaggaaaggtgttacctttaaccacaaccgaacacagaaatttcaaaaacaagagaatcgccggagatgatgatgattttggggagg 43317818  T
Q  118 tgaaaatggaggaagttttagcgagaagaagaagggtcaaggacgtttttgatgttctgaaatgtgaagaaggaggtatgggtaatgcaggggc 211  Q
    ||| ||||||| ||||||||| | | || |||||||||||||| ||||||||     || ||||||| |||||||||||||||||| |||||||    
T  43317819 tgagaatggagaaagttttaggggggaggagaagggtcaaggatgtttttga----gtggaatgtgaggaaggaggtatgggtaatacaggggc 43317908  T

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Target: chr5; HSP #18
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 364 - 489
Target Start/End: Complemental strand, 38596993 - 38596868
Alignment:
Q  364 acttggacggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaat 463  Q
    |||||||| ||  ||| |||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||| |||||||||   | |||||    
T  38596993 acttggacagaaagacctttttgatggacgtctaacaaattcagggactaagttgatatttcgcataattgagggacgaatttggccgacccataaaaat 38596894  T
Q  464 tcagggacgaatttgatggttcactc 489  Q
    ||| ||||||||||||||||||||||    
T  38596893 tcaaggacgaatttgatggttcactc 38596868  T

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Target: chr5; HSP #19
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 398 - 489
Target Start/End: Original strand, 32089925 - 32090016
Alignment:
Q  398 acaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatggttcactc 489  Q
    ||||||||| ||| ||| ||||||||||||||||||||||||||||||||||||||  || |||||||||||||||| |||||| |||||||    
T  32089925 acaaattcagggattaaattgatatttcgcataattgagggacgaagttggccgacccgtaaaaattcagggacgaagttgatgattcactc 32090016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 271 - 479
Target Start/End: Complemental strand, 17574535 - 17574328
Alignment:
Q  271 atcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaaggctaacagaggacttgga 370  Q
    ||||| ||||||| |  |||||||||| |||| ||| |||| ||||||||||||||||||||||||  ||||  |||  |   ||||| |||   |||||    
T  17574535 atcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgcaagg-gacacgtcatcaccactaacggagcttttgga 17574437  T
Q  371 cggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcaggga 470  Q
    ||||| |||  ||||||||||||||||  ||||||| ||||||| | ||||||||||| |||| ||||||||| ||||||||  | | |||||||| |||    
T  17574436 cggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaatttggccgattttttaaaattcaagga 17574337  T
Q  471 cgaatttga 479  Q
    |||||||||    
T  17574336 cgaatttga 17574328  T

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Target: chr5; HSP #21
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 398 - 489
Target Start/End: Original strand, 40330515 - 40330606
Alignment:
Q  398 acaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatggttcactc 489  Q
    ||||||||| ||| ||| |||||||||||||||||||||||||||  |||||||||  ||||||||||||||||||| |||||| |||||||    
T  40330515 acaaattcagggattaaattgatatttcgcataattgagggacgattttggccgacccgtgaaaattcagggacgaagttgatgattcactc 40330606  T

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Target: chr5; HSP #22
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 296 - 440
Target Start/End: Complemental strand, 24496936 - 24496792
Alignment:
Q  296 cttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaaggctaacagaggacttggacggagtgacatttttgatggacgtc 395  Q
    ||||||| ||| |||| |||| |||||||| |||||||| ||||||||||||| ||   |||||||  | |||||||||  |||  |||||||| |||||    
T  24496936 cttccttgttgacacgtgtacgagacaacatagcatgcaggacgacagatcagcaatagtaacagaacatttggacggatggaccattttgatgaacgtc 24496837  T
Q  396 tgacaaattcaaggactaagttgatatttcgcataattgagggac 440  Q
    | ||||||||| ||| ||| |||||||||| ||||||||||||||    
T  24496836 tcacaaattcagggattaatttgatatttcacataattgagggac 24496792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 271 - 479
Target Start/End: Complemental strand, 34327853 - 34327645
Alignment:
Q  271 atcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaaggctaacagaggacttgga 370  Q
    ||||| ||||||| |  |||||||||| |||| ||| |||| ||||| |||||| || ||||||||| |||| ||||  |   |||||||||   |||||    
T  34327853 atcaatttagtccttgtacacgtggctgccttgttgacacgtgtacatgacaacgcaacatgcaagaggacacatcatcaccactaacagagcttttgga 34327754  T
Q  371 cggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcaggga 470  Q
    ||||| |||  ||||||||||||||||  ||||||| ||||||| | ||||||||||| |||| || |||||| |||||| |  |  ||||||||| |||    
T  34327753 cggagagaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagcgacgaatttggccaattttagaaaattcaagga 34327654  T
Q  471 cgaatttga 479  Q
    |||||||||    
T  34327653 cgaatttga 34327645  T

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Target: chr5; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 398 - 481
Target Start/End: Original strand, 33257760 - 33257843
Alignment:
Q  398 acaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatg 481  Q
    ||||||||| ||| ||| |||||||||||||||||| |||||||||||||||||||  || |||||||||||||||| ||||||    
T  33257760 acaaattcagggattaaattgatatttcgcataattaagggacgaagttggccgacccgtaaaaattcagggacgaagttgatg 33257843  T

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Target: chr5; HSP #25
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 292 - 479
Target Start/End: Original strand, 36057540 - 36057727
Alignment:
Q  292 gtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaaggctaacagaggacttggacggagtgacatttttgatgga 391  Q
    |||||| |||| ||| |||| ||||| ||||||||| ||||||||| |||| ||||  |    |||| |||   |||||||||| |||  ||||||||||    
T  36057540 gtggctgccttgttgacacgtgtacatgacaacacaacatgcaagatgacacatcatcaccattaacggagcttttggacggagggaccattttgatgga 36057639  T
Q  392 cgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 479  Q
    ||||||  ||||||| || |||| | ||||||||||| |||| ||||||||| ||||||||  | |||||||||| ||||||||||||    
T  36057640 cgtctgtaaaattcagggtctaaatagatatttcgcaaaattcagggacgaatttggccgatttttgaaaattcaaggacgaatttga 36057727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 398 - 489
Target Start/End: Complemental strand, 42619380 - 42619289
Alignment:
Q  398 acaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatggttcactc 489  Q
    ||||||||  ||| ||| |||||||||||||||||||||||||||| ||| |||||  ||||||||||||||||||| |||||| |||||||    
T  42619380 acaaattctgggattaaattgatatttcgcataattgagggacgaaattgaccgacccgtgaaaattcagggacgaagttgatgattcactc 42619289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 400 - 489
Target Start/End: Complemental strand, 32835965 - 32835876
Alignment:
Q  400 aaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatggttcactc 489  Q
    ||||||| ||| ||| |||||||||||||||||| ||||||||| ||| |||||  ||||||||||||||||||| |||||| |||||||    
T  32835965 aaattcagggattaaattgatatttcgcataattaagggacgaatttgaccgacccgtgaaaattcagggacgaagttgatgattcactc 32835876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 271 - 443
Target Start/End: Original strand, 30468186 - 30468358
Alignment:
Q  271 atcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaaggctaacagaggacttgga 370  Q
    ||||||||||||| |  |||||||| | |||| ||| |||| ||||| ||||||||| ||||||||| ||||  |||  |   ||||| |||   |||||    
T  30468186 atcaaattagtccttgtacacgtggttgccttgttgacacgtgtacatgacaacacaacatgcaagaggacacgtcatcaccactaacggagcttttgga 30468285  T
Q  371 cggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaa 443  Q
    ||||| |||  ||||||||||||||||  ||||||||||||||| | ||||||||||| ||||||| ||||||    
T  30468286 cggagggaccattttgatggacgtctgtaaaattcaaggactaaatagatatttcgcaaaattgagagacgaa 30468358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 398 - 489
Target Start/End: Complemental strand, 18726656 - 18726565
Alignment:
Q  398 acaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatggttcactc 489  Q
    ||||||| | ||||||| |||||||||||||||||||||||||||||||||   ||  || |||||||||||||||| |||||| |||||||    
T  18726656 acaaattaagggactaaattgatatttcgcataattgagggacgaagttggggaacccgtaaaaattcagggacgaagttgatgattcactc 18726565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 100 - 211
Target Start/End: Original strand, 32838236 - 32838352
Alignment:
Q  100 atgatgattttggaggggtgaaaatggaggaagttttagcgagaagaagaagggtcaaggacgtttttgatg-ttct----gaaatgtgaagaaggaggt 194  Q
    |||||| |||||||| ||||| ||||||| ||||||||||| |||| ||||| ||||| ||||||||| ||| ||||    ||||||||| |||||| ||    
T  32838236 atgatggttttggagaggtgagaatggagaaagttttagcgggaaggagaagagtcaatgacgttttttatgtttctgagagaaatgtgaggaaggaagt 32838335  T
Q  195 atgggtaatgcaggggc 211  Q
    |||||||||||||||||    
T  32838336 atgggtaatgcaggggc 32838352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 259 - 429
Target Start/End: Original strand, 32838394 - 32838567
Alignment:
Q  259 ttttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaaggctaac 358  Q
    |||||||| ||| |||||||| ||| | ||||||||||||||||||||| | | |||||||||||||||||||| | ||||||| ||||  | | |||||    
T  32838394 ttttccaaatcattcaaattattccttgaacacgtggcttccttcttgctatgtgtacaagacaacacagcatgtaggacgacatatcaacatgactaac 32838493  T
Q  359 agaggacttggacggagtgacattt---ttgatggacgtctgacaaattcaaggactaagttgatatttcgcat 429  Q
     ||| |||| ||| ||  ||| |||   || |||| |||||||||||||||   | ||||||||||||||||||    
T  32838494 ggagcactttgacagaaagaccttttaattaatggtcgtctgacaaattcagaaattaagttgatatttcgcat 32838567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 383 - 479
Target Start/End: Original strand, 24541230 - 24541326
Alignment:
Q  383 tttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 479  Q
    |||||||||||||||  ||||||| ||||||| ||||||||||||| |||| ||||||||| ||||||||  | | ||||||||  |||||||||||    
T  24541230 tttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaatgacgaatttga 24541326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 271 - 479
Target Start/End: Original strand, 18624914 - 18625122
Alignment:
Q  271 atcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaaggctaacagaggacttgga 370  Q
    ||||||||||||| |  |||||||| | |||| ||| |||| ||| ||||||||||| ||||||||| |||| ||||  |   ||||| |||   |||||    
T  18624914 atcaaattagtccttgtacacgtggttgccttgttgacacgtgtataagacaacacaacatgcaagaagacacatcatcactactaacggagcttttgga 18625013  T
Q  371 cggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcaggga 470  Q
    ||||  |||  ||||||||||||  ||  ||||||| ||||||| | |||||||| || |||| ||||||||| || || ||   ||||||||||| |||    
T  18625014 cggaaggaccattttgatggacgagtgtaaaattcagggactaaatagatatttcacaaaattcagggacgaatttagctgatcagtgaaaattcaagga 18625113  T
Q  471 cgaatttga 479  Q
    |||||||||    
T  18625114 cgaatttga 18625122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 398 - 474
Target Start/End: Complemental strand, 38176723 - 38176647
Alignment:
Q  398 acaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaa 474  Q
    ||||||||| ||| ||| |||||||||||||||||| ||||||||| |||||| ||   ||||||||||||||||||    
T  38176723 acaaattcagggattaaattgatatttcgcataattaagggacgaatttggccaacccatgaaaattcagggacgaa 38176647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 398 - 474
Target Start/End: Complemental strand, 38203947 - 38203871
Alignment:
Q  398 acaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaa 474  Q
    ||||||||| ||| ||| |||||||||||||||||| ||||||||| |||||| ||   ||||||||||||||||||    
T  38203947 acaaattcagggattaaattgatatttcgcataattaagggacgaatttggccaacccatgaaaattcagggacgaa 38203871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 398 - 489
Target Start/End: Complemental strand, 35291139 - 35291048
Alignment:
Q  398 acaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatggttcactc 489  Q
    ||||||||| ||| ||| |||||||||| |||| |||||||| ||| ||||||||   ||||||||||||||||||  |||||| |||||||    
T  35291139 acaaattcagggattaaattgatatttcacatagttgagggatgaatttggccgaaccgtgaaaattcagggacgacattgatgattcactc 35291048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 366 - 452
Target Start/End: Original strand, 29621782 - 29621868
Alignment:
Q  366 ttggacggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccga 452  Q
    |||||||||| |||   |||||||||||||||  ||||||| ||||||| ||||||||||| | |||| ||||||||| ||||||||    
T  29621782 ttggacggagggactgatttgatggacgtctgcaaaattcagggactaatttgatatttcgaaaaattcagggacgaaattggccga 29621868  T

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Target: chr5; HSP #38
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 382 - 479
Target Start/End: Complemental strand, 7267950 - 7267853
Alignment:
Q  382 ttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 479  Q
    ||||||||||||||||  ||||||| ||||||| | ||||||||||| |||| || |||||| |||| |||  | | |||||||| ||||||||||||    
T  7267950 ttttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagtgacgaatttggacgattttttaaaattcaaggacgaatttga 7267853  T

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Target: chr5; HSP #39
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 383 - 452
Target Start/End: Original strand, 42473625 - 42473694
Alignment:
Q  383 tttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccga 452  Q
    |||||||||||||||  ||||||| ||||||  ||||||||||| |||||| ||||||||| ||||||||    
T  42473625 tttgatggacgtctgtaaaattcagggactattttgatatttcgaataattcagggacgaaattggccga 42473694  T

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Target: chr5; HSP #40
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 400 - 479
Target Start/End: Original strand, 8541271 - 8541350
Alignment:
Q  400 aaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 479  Q
    ||||||||||||||| | ||||||||||| |||| ||||||||| ||||||||  | | ||||||||  |||||||||||    
T  8541271 aaattcaaggactaaatagatatttcgcaaaattcagggacgaatttggccgattttttaaaattcaatgacgaatttga 8541350  T

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Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 104
Target Start/End: Original strand, 32836989 - 32837082
Alignment:
Q  11 cacagatacttgataaacaacaggaaagatgttacctttaatcacaatcgaacacacaaacttcaaaaatgtcagaatcgccggagatgatgat 104  Q
    |||||| ||||||||||  | ||||||| |||||||||||| ||||  ||||||||  ||||||||||| || | ||||| || ||||||||||    
T  32836989 cacagaaacttgataaattagaggaaaggtgttacctttaaccacagccgaacacaacaacttcaaaaacgtgaaaatcgtcgaagatgatgat 32837082  T

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Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 398 - 489
Target Start/End: Original strand, 1344814 - 1344905
Alignment:
Q  398 acaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatggttcactc 489  Q
    ||||||||||||||||  ||||||||||| | ||||| ||||| || ||| ||||    || ||||||||||||||| |||||| |||||||    
T  1344814 acaaattcaaggactattttgatatttcgtaaaattgggggacaaatttgaccgattcatgcaaattcagggacgaaattgatgattcactc 1344905  T

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Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 400 - 479
Target Start/End: Complemental strand, 2852975 - 2852896
Alignment:
Q  400 aaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 479  Q
    ||||||| | ||||| ||||||||||||| |||| ||||||||| ||| ||||  | | |||||||| ||||||||||||    
T  2852975 aaattcaggaactaatttgatatttcgcaaaattcagggacgaaattgaccgattttttaaaattcaaggacgaatttga 2852896  T

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Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 400 - 479
Target Start/End: Original strand, 7269446 - 7269525
Alignment:
Q  400 aaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 479  Q
    ||||||| ||||||| ||||||||||||| |||| ||||||||| || |||||  | | ||||||||  |||||||||||    
T  7269446 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattagccgattttttaaaattcaaagacgaatttga 7269525  T

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Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 400 - 479
Target Start/End: Original strand, 12738736 - 12738815
Alignment:
Q  400 aaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 479  Q
    ||||||| ||||||| | ||||||||||| |||| ||| ||||| ||||||||  | | |||||||| ||||||||||||    
T  12738736 aaattcagggactaaatagatatttcgcaaaattcaggtacgaatttggccgattttttaaaattcaaggacgaatttga 12738815  T

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Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 400 - 479
Target Start/End: Original strand, 12801559 - 12801638
Alignment:
Q  400 aaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 479  Q
    ||||||| ||||||| | ||||||||||| |||| ||| ||||| ||||||||  | | |||||||| ||||||||||||    
T  12801559 aaattcagggactaaatagatatttcgcaaaattcaggtacgaatttggccgattttttaaaattcaaggacgaatttga 12801638  T

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Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 400 - 479
Target Start/End: Complemental strand, 30463989 - 30463910
Alignment:
Q  400 aaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 479  Q
    ||||||| ||||||| | ||||||||||| |||| ||||||||| ||| ||||  | | |||||||| ||||||||||||    
T  30463989 aaattcagggactaaatagatatttcgcaaaattcagggacgaatttgaccgattttttaaaattcaaggacgaatttga 30463910  T

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Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 271 - 330
Target Start/End: Original strand, 42620690 - 42620749
Alignment:
Q  271 atcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagca 330  Q
    ||||| |||||||||| ||||||||||| ||| || ||||| ||||||| ||||||||||    
T  42620690 atcaatttagtccctatacacgtggctttctttttcccacgtgtacaagccaacacagca 42620749  T

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Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 366 - 452
Target Start/End: Complemental strand, 40780673 - 40780587
Alignment:
Q  366 ttggacggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccga 452  Q
    |||||||||| |||   |||||||||||| ||  ||||||| ||||||| ||||||||||| | |||| ||||||||| ||| ||||    
T  40780673 ttggacggagggactgatttgatggacgtttgcaaaattcagggactaatttgatatttcgaaaaattcagggacgaaattgtccga 40780587  T

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Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 366 - 479
Target Start/End: Original strand, 2854328 - 2854440
Alignment:
Q  366 ttggacggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattc 465  Q
    |||||||||| |||   |||| ||||||||||  ||||||| ||||||| ||||| ||||| | |||| ||||||||| ||| ||||  | | |||||||    
T  2854328 ttggacggagggacgaatttgttggacgtctgtaaaattcagggactaatttgat-tttcgaaaaattcagggacgaaattgaccgatttttcaaaattc 2854426  T
Q  466 agggacgaatttga 479  Q
    | ||||||||||||    
T  2854427 aaggacgaatttga 2854440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 384 - 489
Target Start/End: Original strand, 42620782 - 42620887
Alignment:
Q  384 ttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatggt 483  Q
    ||||||||||||  |||||||||  |||||  ||||||||| |   ||||| |||||||| |||||||||   ||||||||| |||| ||| ||||||||    
T  42620782 ttgatggacgtcaaacaaattcagagactattttgatatttggttaaattgggggacgaatttggccgacccctgaaaattccgggatgaaattgatggt 42620881  T
Q  484 tcactc 489  Q
    | ||||    
T  42620882 tgactc 42620887  T

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Target: chr3 (Bit Score: 190; Significance: 1e-103; HSPs: 76)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 252 - 489
Target Start/End: Original strand, 23888659 - 23888896
Alignment:
Q  252 ctcaacattttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaa 351  Q
    |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| ||    
T  23888659 ctcaacattttccaattcaatcaaattagtccctgaacatgtggcttccttcttgccacgcgtacaagacaacacagtatgcaaggcgacagatcagcaa 23888758  T
Q  352 ggctaacagaggacttggacggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccg 451  Q
    ||||||| ||||| |||||||||| ||| |||||||||||||| ||||||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  23888759 ggctaacggaggatttggacggagggacctttttgatggacgtttgacaaattcagggactaagctgatatttcgcataattgagggacgaagttggccg 23888858  T
Q  452 acgtgtgaaaattcagggacgaatttgatggttcactc 489  Q
    ||||||||||||||||||||||||||||||||||||||    
T  23888859 acgtgtgaaaattcagggacgaatttgatggttcactc 23888896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 178; E-Value: 1e-95
Query Start/End: Original strand, 18 - 211
Target Start/End: Original strand, 45898029 - 45898222
Alignment:
Q  18 acttgataaacaacaggaaagatgttacctttaatcacaatcgaacacacaaacttcaaaaatgtcagaatcgccggagatgatgatgattttggagggg 117  Q
    ||||||||||||||||||||  |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  45898029 acttgataaacaacaggaaatgtgttacctttaatcacaaccgaacacacaaacttcaaaaatgtcagaatcgccggagatgatgatgtttttggagggg 45898128  T
Q  118 tgaaaatggaggaagttttagcgagaagaagaagggtcaaggacgtttttgatgttctgaaatgtgaagaaggaggtatgggtaatgcaggggc 211  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45898129 tgaaaatggaggaagttttagcgagaagaagaagggtcaaggacgtttttgatgttctgaaatgtgaagaaggaggtatgggtaatgcaggggc 45898222  T

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Target: chr3; HSP #3
Raw Score: 146; E-Value: 2e-76
Query Start/End: Original strand, 41 - 210
Target Start/End: Original strand, 23888448 - 23888617
Alignment:
Q  41 gttacctttaatcacaatcgaacacacaaacttcaaaaatgtcagaatcgccggagatgatgatgattttggaggggtgaaaatggaggaagttttagcg 140  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  23888448 gttacctttaatcacaaccgaacacacaaacttaaaaaatgtcagaatcgtcggagatgatgatgattttggaggggtgaaaatggaggaagttttagcg 23888547  T
Q  141 agaagaagaagggtcaaggacgtttttgatgttctgaaatgtgaagaaggaggtatgggtaatgcagggg 210  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  23888548 agaagaagaagggtcaaggtcgtttttgatgttctgaaatgtgaagaaagagatatgggtaatgcagggg 23888617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 135; E-Value: 6e-70
Query Start/End: Original strand, 259 - 489
Target Start/End: Complemental strand, 23774381 - 23774152
Alignment:
Q  259 ttttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaaggctaac 358  Q
    |||||||| |||||| ||||||||| | |||||||||||||||| |||||||| ||||||||||||||| |||||| | ||||||||||  | |||||||    
T  23774381 ttttccaaatcaatcgaattagtccttgaacacgtggcttccttattgccacgtgtacaagacaacacatcatgcagggcgacagatcaacatggctaac 23774282  T
Q  359 agaggacttggacggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtg 458  Q
    |||| |||| |||| || ||| |||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| |||||||||  |||    
T  23774281 agagcacttagacg-agggacttttttgatggacgtctgacaaattcagggactaaattgatatttcgcataattgagggacgaatttggccgactcgtg 23774183  T
Q  459 aaaattcagggacgaatttgatggttcactc 489  Q
    |||||||| ||||||||||||||||||||||    
T  23774182 aaaattcaaggacgaatttgatggttcactc 23774152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 259 - 489
Target Start/End: Complemental strand, 48634111 - 48633877
Alignment:
Q  259 ttttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaa----cacagcatgcaagacgacagatcaggaaggc 354  Q
    |||| |||||||||||||||||||| | |||||||||||||||| |||||||| |||||||||||    |||| |||||| | ||||||||||  | |||    
T  48634111 tttttcaattcaatcaaattagtccttgaacacgtggcttcctttttgccacgtgtacaagacaaacaacacatcatgcagggcgacagatcaacatggc 48634012  T
Q  355 taacagaggacttggacggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacg 454  Q
    |||| ||| |||||||||||| ||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||| ||| |||||     
T  48634011 taacggagcacttggacggagggacctttttgatggacgtctgacaaattcagggactaagttgatatttcgcataattgatggacgaatttgaccgacc 48633912  T
Q  455 tgtgaaaattcagggacgaatttgatggttcactc 489  Q
     ||||||||||| ||||||||||||||||||||||    
T  48633911 cgtgaaaattcaaggacgaatttgatggttcactc 48633877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 123; E-Value: 8e-63
Query Start/End: Original strand, 259 - 489
Target Start/End: Original strand, 18430165 - 18430395
Alignment:
Q  259 ttttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaaggctaac 358  Q
    ||||||||||||||||||||||||| | ||||||||| ||||||||||||||| |||||||||||||| ||||||| | |||||  |||  | |||||||    
T  18430165 ttttccaattcaatcaaattagtccttgaacacgtggtttccttcttgccacgtgtacaagacaacacggcatgcagggcgacatgtcaccatggctaac 18430264  T
Q  359 agaggacttggacggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtg 458  Q
     ||| |||||||||||| ||| |||||  ||||||||||||| ||||| |||||||||||||||||||||||||||||||| ||| ||||| |||  ||     
T  18430265 ggagcacttggacggagggacctttttattggacgtctgacatattcagggactaagttgatatttcgcataattgagggatgaatttggctgacccgtt 18430364  T
Q  459 aaaattcagggacgaatttgatggttcactc 489  Q
    |||||||| ||||||||||||||||||||||    
T  18430365 aaaattcaaggacgaatttgatggttcactc 18430395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 123; E-Value: 8e-63
Query Start/End: Original strand, 259 - 489
Target Start/End: Original strand, 41020897 - 41021127
Alignment:
Q  259 ttttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaaggctaac 358  Q
    |||||||| ||||||||||| |||||| ||||||||||||||||||||||||||||||| |||| |||||||||| || |||||  |||| | |||||||    
T  41020897 ttttccaaatcaatcaaattcgtccctgaacacgtggcttccttcttgccacgcgtacaggacagcacagcatgccaggcgacatgtcagcatggctaac 41020996  T
Q  359 agaggacttggacggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtg 458  Q
     |||  | |  |||||| ||| |||||||||||||||||||||||||| |||  || |||| |||||||||||||||||||| || |||||||||| |||    
T  41020997 ggagcccgttaacggagggacctttttgatggacgtctgacaaattcagggatgaaattgaaatttcgcataattgagggactaatttggccgacgcgtg 41021096  T
Q  459 aaaattcagggacgaatttgatggttcactc 489  Q
    |||||||||||||||||||||||||||||||    
T  41021097 aaaattcagggacgaatttgatggttcactc 41021127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 123; E-Value: 8e-63
Query Start/End: Original strand, 259 - 489
Target Start/End: Original strand, 45257114 - 45257344
Alignment:
Q  259 ttttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaaggctaac 358  Q
    ||||||||||||||||||||||||| | ||||||||||||| ||||||||||| ||||||||||||||| |||||| | || ||  |||| | | |||||    
T  45257114 ttttccaattcaatcaaattagtccttgaacacgtggcttcattcttgccacgtgtacaagacaacacaacatgcagggcggcatgtcagcatgactaac 45257213  T
Q  359 agaggacttggacggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtg 458  Q
     ||| |||||||||||| ||||||||| |||||||||||||||||||| | |||||||||||||||  ||||||||||||| ||| |||||||||  |||    
T  45257214 ggagcacttggacggagggacattttttatggacgtctgacaaattcaggaactaagttgatattttacataattgagggatgaatttggccgacccgtg 45257313  T
Q  459 aaaattcagggacgaatttgatggttcactc 489  Q
    |||||||| | ||||||||||||||||||||    
T  45257314 aaaattcaagaacgaatttgatggttcactc 45257344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 259 - 489
Target Start/End: Original strand, 24382787 - 24383017
Alignment:
Q  259 ttttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaaggctaac 358  Q
    ||||||||||||||||||||||||| | |||||||||||||||| ||||| ||  || ||||||||||| |||||| | ||||| ||||| | |||||||    
T  24382787 ttttccaattcaatcaaattagtccttgaacacgtggcttcctttttgccccgtatataagacaacacaacatgcagggcgacatatcagcatggctaac 24382886  T
Q  359 agaggacttggacggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtg 458  Q
     || ||||||||||||| ||| ||||||||||||||||||||||| || |||||||||||||||||| ||||||||| ||| ||| |||||||||  ||     
T  24382887 ggatgacttggacggagggacctttttgatggacgtctgacaaatccatggactaagttgatatttctcataattgaaggatgaatttggccgacccgta 24382986  T
Q  459 aaaattcagggacgaatttgatggttcactc 489  Q
    |||||||| |||| |||||||||||||||||    
T  24382987 aaaattcaaggaccaatttgatggttcactc 24383017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 341 - 489
Target Start/End: Original strand, 45898324 - 45898472
Alignment:
Q  341 cagatcaggaaggctaacagaggacttggacggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggac 440  Q
    |||||||| ||||||||| |||||||||||||||| ||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  45898324 cagatcagcaaggctaacggaggacttggacggagggacctttttgatagacgtctgacaaattcaaggactaagttgatatttcgcataattcagggac 45898423  T
Q  441 gaagttggccgacgtgtgaaaattcagggacgaatttgatggttcactc 489  Q
     ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  45898424 aaagttggtcgacgtgtgaaaattcagggacgaatttgatggttcactc 45898472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 271 - 489
Target Start/End: Original strand, 31887358 - 31887576
Alignment:
Q  271 atcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaaggctaacagaggacttgga 370  Q
    ||||||||||||| | ||||  |||||||||| |||||||| |||||||||||||||||||||||| ||||| ||||| | ||||||| ||| |||||||    
T  31887358 atcaaattagtccttgaacatatggcttcctttttgccacgtgtacaagacaacacagcatgcaaggcgacaaatcagcatggctaacggagcacttgga 31887457  T
Q  371 cggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcaggga 470  Q
    ||||| ||| |||||||| ||| ||||||||||||| |||||||||||||||||||||||||||| ||  ||| ||| ||||   ||||||||||| |||    
T  31887458 cggagggacctttttgatagacatctgacaaattcagggactaagttgatatttcgcataattgatggttgaatttgaccgatccgtgaaaattcaagga 31887557  T
Q  471 cgaatttgatggttcactc 489  Q
    |||||||||||||||||||    
T  31887558 cgaatttgatggttcactc 31887576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 308 - 489
Target Start/End: Original strand, 40508854 - 40509035
Alignment:
Q  308 cacgcgtacaagacaacacagcatgcaagacgacagatcaggaaggctaacagaggacttggacggagtgacatttttgatggacgtctgacaaattcaa 407  Q
    |||| ||||| ||||||||| |||||| | ||||||||||| | | ||||| ||  |||||||||||| |||||||||||||||||||||||||||||||    
T  40508854 cacgtgtacatgacaacacaacatgcagggcgacagatcagcacgactaacggaacacttggacggagggacatttttgatggacgtctgacaaattcaa 40508953  T
Q  408 ggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatggttcactc 489  Q
    ||| |||||||||||||||||||||||||||||||| |||||||||  ||||||||||| ||||||||||||||||||||||    
T  40508954 ggattaagttgatatttcgcataattgagggacgaatttggccgacccgtgaaaattcaaggacgaatttgatggttcactc 40509035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 259 - 489
Target Start/End: Original strand, 33113075 - 33113304
Alignment:
Q  259 ttttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaaggctaac 358  Q
    ||||||| ||| ||||||||||||| | |||||||||||||||| |||||||| |||||||||| | || |||||  | ||||||||| | | |||||||    
T  33113075 ttttccacttccatcaaattagtccttgaacacgtggcttcctttttgccacgtgtacaagacagcgcaacatgctgggcgacagatcggcatggctaac 33113174  T
Q  359 agaggacttggacggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtg 458  Q
     ||  ||||| |||||| ||| |||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| ||  |||||||||  ||     
T  33113175 ggatcacttg-acggagggacctttttgatggacgtctgacaaatttagggactaagttgatatttcgcataattgagggatgattttggccgacccgta 33113273  T
Q  459 aaaattcagggacgaatttgatggttcactc 489  Q
    |||||||| |||| |||||||||||||||||    
T  33113274 aaaattcaaggactaatttgatggttcactc 33113304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 19 - 211
Target Start/End: Original strand, 18429924 - 18430121
Alignment:
Q  19 cttgataaacaacaggaaagatgttacctttaatcacaatcgaacacacaaacttcaaaaatgtcagaatcgccggagatgatgatgattttggaggggt 118  Q
    ||||||||||||   ||||| |||||||||||||||||  |||||||| |||||||||||| |||| ||||||||| |||||||||||||||||||||||    
T  18429924 cttgataaacaatttgaaaggtgttacctttaatcacagccgaacacagaaacttcaaaaacgtcaaaatcgccggtgatgatgatgattttggaggggt 18430023  T
Q  119 gaaaatggaggaagttttagcgagaagaagaagggtcaaggacgtttttgatgtt-----ctgaaatgtgaagaaggaggtatgggtaatgcaggggc 211  Q
    || ||||||| |||||||||||  ||   ||| ||||||||| |||||||||| |     ||||||||||||||| ||||||||||||||||||||||    
T  18430024 gagaatggagaaagttttagcggaaatgtgaaaggtcaaggatgtttttgatgcttctgactgaaatgtgaagaatgaggtatgggtaatgcaggggc 18430121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 11 - 203
Target Start/End: Original strand, 33112825 - 33113022
Alignment:
Q  11 cacagatacttgataaacaacaggaaagatgttacctttaatcacaatcgaacacacaaacttcaaaaatgtcagaatcgccggagatgatgatgatttt 110  Q
    |||||| ||||||||||| | ||||||| |||||||||||| |||| ||||||||| |||||||||||| || |||||||| ||||||||||||||||||    
T  33112825 cacagaaacttgataaactagaggaaaggtgttacctttaaccacagtcgaacacagaaacttcaaaaacgtgagaatcgctggagatgatgatgatttt 33112924  T
Q  111 ggaggggtgaaaatggaggaagttttagcgagaagaagaagggtcaaggacgtttttgatgtt-----ctgaaatgtgaagaaggaggtatgggtaat 203  Q
    |||| ||||| ||||||| ||||||||||| |||  ||||||||||  ||||||||| |||||      |||||||||| ||||||||||||||||||    
T  33112925 ggagaggtgagaatggagaaagttttagcgggaatgagaagggtcagagacgttttttatgtttatgagtgaaatgtgaggaaggaggtatgggtaat 33113022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 259 - 439
Target Start/End: Original strand, 33852564 - 33852744
Alignment:
Q  259 ttttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaaggctaac 358  Q
    ||||||||||||||||||||||||| | |||||||||||||||||||||||||  |||||||||||||| |||||| | |||||  |||  | |||||||    
T  33852564 ttttccaattcaatcaaattagtccttgaacacgtggcttccttcttgccacgtctacaagacaacacaacatgcagggcgacatgtcaccatggctaac 33852663  T
Q  359 agaggacttggacggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgaggga 439  Q
     ||| |||||||| ||| ||| |||||||||||||||||| |||||||   | ||| ||||||||||||||||||||||||    
T  33852664 ggagcacttggacagagggacctttttgatggacgtctgataaattcagaaattaaattgatatttcgcataattgaggga 33852744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 259 - 489
Target Start/End: Original strand, 51454140 - 51454374
Alignment:
Q  259 ttttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatc-aggaa---ggc 354  Q
    |||| ||||| |||| ||||||||| | |||||||||| |||||||||||||| ||| ||||||||||| |||||| |  |||| ||  | |||   |||    
T  51454140 tttttcaatttaatctaattagtccttgaacacgtggcctccttcttgccacgtgtataagacaacacatcatgcagggggacatatatatgaacatggc 51454239  T
Q  355 taacagaggacttggacggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacg 454  Q
    |||| ||  |||||||| ||| ||||||||| ||||| || |||||||||||| |||||| |||||||||||||||||||||| | ||| ||||||||      
T  51454240 taacggatcacttggacagagggacattttttatggatgtttgacaaattcaaagactaatttgatatttcgcataattgaggaatgaatttggccgatc 51454339  T
Q  455 tgtgaaaattcagggacgaatttgatggttcactc 489  Q
     ||||||||||| ||||||||||||||||||||||    
T  51454340 cgtgaaaattcaaggacgaatttgatggttcactc 51454374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 271 - 489
Target Start/End: Original strand, 2977235 - 2977453
Alignment:
Q  271 atcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaaggctaacagaggacttgga 370  Q
    ||||||||||||| | |||| |||| ||||||||||||||| |||  |||||||| |||||||| | ||||| ||||| |  |||||| ||| ||||||     
T  2977235 atcaaattagtccttgaacatgtggtttccttcttgccacgtgtattagacaacatagcatgcagggcgacaaatcagcatcgctaacggagcacttggg 2977334  T
Q  371 cggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcaggga 470  Q
    ||||  ||| |||||||||||||| ||||||||| | ||||| | |||||||||||||||||| ||||| ||| ||||||||   || |||||||| |||    
T  2977335 cggatggacctttttgatggacgtatgacaaatttagggactgaattgatatttcgcataattaagggatgaatttggccgattcgtaaaaattcaagga 2977434  T
Q  471 cgaatttgatggttcactc 489  Q
    ||||||||||| |||||||    
T  2977435 cgaatttgatgattcactc 2977453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 19 - 207
Target Start/End: Original strand, 33852329 - 33852518
Alignment:
Q  19 cttgataaacaacaggaaagatgttacctttaatcacaatcgaacacacaaacttcaaaaatgtcagaatcgccggagatgatgatgattttggaggggt 118  Q
    |||||||||||||  |||||  ||||||||||||||||  | |||||| |||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  33852329 cttgataaacaacctgaaaggcgttacctttaatcacagcc-aacacagaaacttcaaaaacgtcagaatcgccggtgatgatgatgattttggaggggt 33852427  T
Q  119 gaaaatggaggaagttttagcgagaagaagaagggtcaaggacgtttttgatgtt-----ctgaaatgtgaagaaggaggtatgggtaatgcag 207  Q
    || ||||||| |||||||||||  |||  |||  |||||||| |||||| |||||     |||||||||   ||||||||||||||||||||||    
T  33852428 gagaatggagaaagttttagcggaaaggtgaaaagtcaaggatgttttttatgtttctgactgaaatgt---gaaggaggtatgggtaatgcag 33852518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 272 - 434
Target Start/End: Complemental strand, 1846001 - 1845839
Alignment:
Q  272 tcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaaggctaacagaggacttggac 371  Q
    |||||||||||| | |||||||||||||||| |||||||| ||| | |||| |||| |||||| | ||||| ||||  | || |||| ||| ||||||||    
T  1846001 tcaaattagtccttgaacacgtggcttcctttttgccacgtgtataggacatcacatcatgcagggcgacatatcaacatggttaacggagcacttggac 1845902  T
Q  372 ggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattg 434  Q
    |||| ||| ||||||||||||||||| ||||||||| |||||||||||||||| |||||||||    
T  1845901 ggagggacgtttttgatggacgtctgtcaaattcaaagactaagttgatattttgcataattg 1845839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 19 - 173
Target Start/End: Original strand, 41020650 - 41020804
Alignment:
Q  19 cttgataaacaacaggaaagatgttacctttaatcacaatcgaacacacaaacttcaaaaatgtcagaatcgccggagatgatgatgattttggaggggt 118  Q
    |||||||||||  ||||||| |||||||||| |||||  |||||||||  ||||||||| | | ||||||||  ||||||||||||||||||||||||||    
T  41020650 cttgataaacacaaggaaaggtgttacctttgatcacggtcgaacacaggaacttcaaacacgccagaatcgatggagatgatgatgattttggaggggt 41020749  T
Q  119 gaaaatggaggaagttttagcgagaagaagaagggtcaaggacgtttttgatgtt 173  Q
    || ||||||| | ||||||||| |||| ||||| |||||||| ||||||||||||    
T  41020750 gacaatggagaacgttttagcgggaaggagaagagtcaaggatgtttttgatgtt 41020804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 296 - 489
Target Start/End: Original strand, 39641770 - 39641963
Alignment:
Q  296 cttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaaggctaacagaggacttggacggagtgacatttttgatggacgtc 395  Q
    |||||||||| ||||  ||| ||||||||||| |||||| ||||  ||||||  | ||||||| ||| ||||| |||||| ||| ||||| ||| |||||    
T  39641770 cttccttcttaccacatgtataagacaacacaacatgcaggacggtagatcaacatggctaacggagtacttgaacggagggaccttttttatgaacgtc 39641869  T
Q  396 tgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatggttcactc 489  Q
    ||||||||| |||||||||||||||| || | ||||||||| || ||| |||||||||  || |||||||| |||| |||||||||||||||||    
T  39641870 tgacaaatttaaggactaagttgatactttgaataattgagagatgaatttggccgacccgtaaaaattcaaggacaaatttgatggttcactc 39641963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 68 - 211
Target Start/End: Original strand, 24382587 - 24382735
Alignment:
Q  68 aaacttcaaaaatgtcagaatcgccggagatgatgatgattttggaggggtgaaaatggaggaagttttagcgagaagaagaagggtcaaggacgttttt 167  Q
    |||||| ||||| || ||||||| |||||||||||||||||||| |||||||||||||||| | ||||||||| |||| ||||| | ||| |||||||||    
T  24382587 aaactttaaaaacgtgagaatcgtcggagatgatgatgattttgaaggggtgaaaatggagaatgttttagcgggaaggagaagagacaatgacgttttt 24382686  T
Q  168 gatgtt-----ctgaaatgtgaagaaggaggtatgggtaatgcaggggc 211  Q
     |||||      |||||||||||||||||||||||||||||||||||||    
T  24382687 tatgtttctgagtgaaatgtgaagaaggaggtatgggtaatgcaggggc 24382735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 19 - 211
Target Start/End: Original strand, 45256873 - 45257065
Alignment:
Q  19 cttgataaacaacaggaaagatgttacctttaatcacaatcgaacacacaaacttcaaaaatgtcagaatcgccggagatgatgatgattttggaggggt 118  Q
    ||||||||||||   |||||  ||||||||||||||||  |||||| | |||||||||||| |||||||||||| | || ||||||||||||||||||||    
T  45256873 cttgataaacaatctgaaaggcgttacctttaatcacagccgaacatagaaacttcaaaaacgtcagaatcgccagtga-gatgatgattttggaggggt 45256971  T
Q  119 gaaaatggaggaagttttagcgagaagaagaagggtcaaggacgtttttgatgtt----ctgaaatgtgaagaaggaggtatgggtaatgcaggggc 211  Q
    || ||||||| |||||||||||  |||   || ||||||||| ||||||||||||    || ||||||   |||||| |||||||||||||||||||    
T  45256972 gagaatggagaaagttttagcggaaaggtaaaaggtcaaggatgtttttgatgttttgactaaaatgt---gaaggatgtatgggtaatgcaggggc 45257065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 18 - 211
Target Start/End: Complemental strand, 48634356 - 48634161
Alignment:
Q  18 acttgataaacaacaggaaagatgttacctttaatcacaatcgaacacacaaacttcaaaaatgtcagaatcgccggagatgatgatgattttggagggg 117  Q
    ||||||||||  | ||||||| |||||||||||| ||||  ||||||||  ||||||||||| ||  |||||| ||||||||||| |   ||||||| ||    
T  48634356 acttgataaattagaggaaaggtgttacctttaaccacagccgaacacaacaacttcaaaaacgtgcgaatcgtcggagatgatggt---tttggagagg 48634260  T
Q  118 tgaaaatggaggaagttttagcgagaagaagaagggtcaaggacgtttttgatgttct-----gaaatgtgaagaaggaggtatgggtaatgcaggggc 211  Q
    ||| ||||||| ||||||||||| |||| ||||| ||||||||||||||||||||| |     ||||||||| |||||| ||| || ||||||||||||    
T  48634259 tgagaatggagaaagttttagcgggaaggagaagagtcaaggacgtttttgatgtttttgagagaaatgtgaggaaggaagtaaggataatgcaggggc 48634161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 11 - 173
Target Start/End: Complemental strand, 23774632 - 23774470
Alignment:
Q  11 cacagatacttgataaacaacaggaaagatgttacctttaatcacaatcgaacacacaaacttcaaaaatgtcagaatcgccggagatgatgatgatttt 110  Q
    |||||| ||||||||||  | ||||||  |||||||||||| ||||  ||||||||  |||||||| ||  | ||||||| || ||||||||||| ||||    
T  23774632 cacagaaacttgataaattagaggaaatgtgttacctttaaccacagccgaacacaacaacttcaagaacatgagaatcgtcgaagatgatgatggtttt 23774533  T
Q  111 ggaggggtgaaaatggaggaagttttagcgagaagaagaagggtcaaggacgtttttgatgtt 173  Q
    |||| ||||| ||||||| ||||||||||| |||| ||||| ||||||||||||||| |||||    
T  23774532 ggagaggtgagaatggagaaagttttagcgggaaggagaagagtcaaggacgttttttatgtt 23774470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 252 - 312
Target Start/End: Original strand, 45898264 - 45898324
Alignment:
Q  252 ctcaacattttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgc 312  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45898264 ctcaacattttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgc 45898324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 18 - 203
Target Start/End: Original strand, 31887098 - 31887288
Alignment:
Q  18 acttgataaacaacaggaaagatgttacctttaatcacaatcgaacacacaaacttcaaaaatgtcagaatcgccggagatgatgatgattttggagggg 117  Q
    ||||||||||| | ||||||| |||||||||||  ||||  |||||||| |||||||||||  |  ||||||||||||||||| |||||||||  || ||    
T  31887098 acttgataaactagaggaaaggtgttacctttagccacagccgaacacagaaacttcaaaaccgcgagaatcgccggagatgacgatgattttatagagg 31887197  T
Q  118 tgaaaatggaggaagttttagcgagaagaagaagggtcaaggacgtttttgatgtt-----ctgaaatgtgaagaaggaggtatgggtaat 203  Q
    ||  ||||||| ||||||||||| |||| |||| | |||| |||||||||||| ||      |||||||||| |||||||||||| |||||    
T  31887198 tgggaatggagaaagttttagcgggaaggagaatgttcaatgacgtttttgatatttttgagtgaaatgtgaggaaggaggtatgagtaat 31887288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 271 - 479
Target Start/End: Original strand, 30599844 - 30600052
Alignment:
Q  271 atcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaaggctaacagaggacttgga 370  Q
    ||||| ||||||| |  |||||||||| |||| ||| || | ||||||||||||||||||||||||| |||| ||||  |   |||||||||   |||||    
T  30599844 atcaatttagtccttgtacacgtggctgccttattgacatgtgtacaagacaacacagcatgcaagaggacacatcatcaccactaacagagcttttgga 30599943  T
Q  371 cggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcaggga 470  Q
    ||||| |||  ||||||| |||||||   ||||||| ||||||| | ||||||||||| |||| |||||| || ||||||||  ||| |||||| | |||    
T  30599944 cggagggaccattttgatcgacgtctctaaaattcagggactaaatagatatttcgcaaaattcagggacaaatttggccgatttgtaaaaatttaagga 30600043  T
Q  471 cgaatttga 479  Q
    |||||||||    
T  30600044 cgaatttga 30600052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 398 - 489
Target Start/End: Complemental strand, 45897141 - 45897050
Alignment:
Q  398 acaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatggttcactc 489  Q
    ||||||||| ||| ||| ||||||||||||||||||||||||||||||||||||||  || |||||||| ||||||| |||||| |||||||    
T  45897141 acaaattcagggattaaattgatatttcgcataattgagggacgaagttggccgacccgtaaaaattcaaggacgaagttgatgattcactc 45897050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 91 - 211
Target Start/End: Original strand, 2977049 - 2977174
Alignment:
Q  91 ccggagatgatgatgattttggaggggtgaaaatggaggaagttttagcgagaagaagaagggtcaaggacgtttttgatgtt-----ctgaaatgtgaa 185  Q
    |||||||||||||||||||||||| ||||| ||||||| | ||||| ||| ||||||||||||||| | || |||||||||||      ||||||||||     
T  2977049 ccggagatgatgatgattttggagaggtgagaatggagaaggtttttgcgggaagaagaagggtcacgaacatttttgatgtttctgagtgaaatgtgag 2977148  T
Q  186 gaaggaggtatgggtaatgcaggggc 211  Q
    |||||||||||| ||||| |||||||    
T  2977149 gaaggaggtatgagtaatacaggggc 2977174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 271 - 479
Target Start/End: Original strand, 2226079 - 2226286
Alignment:
Q  271 atcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaaggctaacagaggacttgga 370  Q
    ||||| ||||||| |  |||||||||| |||| ||| |||| ||||||||||||||||||||||||  ||||  |||  |   |||||||||   |||||    
T  2226079 atcaatttagtccttgtacacgtggctaccttgttgacacgtgtacaagacaacacagcatgcaagg-gacacgtcatcaccactaacagagtttttgga 2226177  T
Q  371 cggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcaggga 470  Q
    ||||| ||   |||||||| |||||||  ||||||| ||||||| | ||||||||||| |||| ||||||||| ||||||||  | | |||||||| |||    
T  2226178 cggagggaacattttgatgaacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaatttggccgattttttaaaattcaagga 2226277  T
Q  471 cgaatttga 479  Q
    |||||||||    
T  2226278 cgaatttga 2226286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 271 - 479
Target Start/End: Complemental strand, 51684828 - 51684620
Alignment:
Q  271 atcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaaggctaacagaggacttgga 370  Q
    ||||||||||||| |  ||||||| || |||| ||| |||| ||||| ||||||||| || |||||| |||| ||||  |   ||||| |||   |||||    
T  51684828 atcaaattagtccttgtacacgtgtctgccttgttgacacgtgtacaggacaacacaacacgcaagaggacacatcatcaccactaacggagcttttgga 51684729  T
Q  371 cggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcaggga 470  Q
    ||||| |||  ||||||||||||||||  ||||||||||||||| | ||||||| ||| |||| ||||| ||| ||||| ||  | |||||||||| |||    
T  51684728 cggagggaccattttgatggacgtctgtaaaattcaaggactaaatagatattttgcaaaattcagggatgaatttggctgatttttgaaaattcaagga 51684629  T
Q  471 cgaatttga 479  Q
    |||||||||    
T  51684628 cgaatttga 51684620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 271 - 479
Target Start/End: Original strand, 53190686 - 53190893
Alignment:
Q  271 atcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaaggctaacagaggacttgga 370  Q
    ||||| ||||||| |  |||||||||| |||| ||| |||| ||||||||||||||| ||||||||  ||||  |||  |   ||||| |||   |||||    
T  53190686 atcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaagg-gacacgtcatcaccactaacggagcttttgga 53190784  T
Q  371 cggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcaggga 470  Q
    ||||| |||  ||||||||||||||||  ||||||| ||||||| | ||||||||||| |||| ||||||||| ||||||||  | | |||||||| |||    
T  53190785 cggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaatttggccgattttttaaaattcaagga 53190884  T
Q  471 cgaatttga 479  Q
    |||||||||    
T  53190885 cgaatttga 53190893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 366 - 479
Target Start/End: Complemental strand, 2660335 - 2660222
Alignment:
Q  366 ttggacggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattc 465  Q
    |||||||||| |||   |||||||||||||||  ||||||||||||||| ||||||||||||| |||| ||||||||| |||| |||  | | |||||||    
T  2660335 ttggacggagggacgaatttgatggacgtctgtaaaattcaaggactaatttgatatttcgcaaaattcagggacgaaattggtcgatttttcaaaattc 2660236  T
Q  466 agggacgaatttga 479  Q
    | ||||||||||||    
T  2660235 aaggacgaatttga 2660222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 271 - 479
Target Start/End: Original strand, 27899007 - 27899215
Alignment:
Q  271 atcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaaggctaacagaggacttgga 370  Q
    ||||||||||||| |  |||| ||||| |||| ||| |||| ||||| ||||||||| ||||||||| ||||  |||  |   ||||| |||   |||||    
T  27899007 atcaaattagtccttgtacacatggctgccttgttgacacgtgtacatgacaacacaacatgcaagaggacacgtcatcaccactaacggagcttttgga 27899106  T
Q  371 cggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcaggga 470  Q
    ||||| |||  |||| |||||||||||  ||||||| ||||||| | ||||||||||| |||| | ||||||| ||||||||  | | |||||||| |||    
T  27899107 cggagggaccatttttatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcaaggacgaatttggccgattttttaaaattcaagga 27899206  T
Q  471 cgaatttga 479  Q
    |||||||||    
T  27899207 cgaatttga 27899215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 398 - 489
Target Start/End: Original strand, 1847645 - 1847736
Alignment:
Q  398 acaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatggttcactc 489  Q
    ||||||||| ||| ||| ||||||||| |||||||||||||| ||| |||||||||  ||||||||||| |||| ||||||||| |||||||    
T  1847645 acaaattcagggattaaattgatattttgcataattgagggatgaatttggccgacccgtgaaaattcaaggacaaatttgatgattcactc 1847736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 288 - 479
Target Start/End: Complemental strand, 21348924 - 21348733
Alignment:
Q  288 acacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaaggctaacagaggacttggacggagtgacatttttga 387  Q
    |||||||||  |||| ||| |||| ||||| ||||||||| ||||||||| |||| || |  |   |||||||||   |||||||||| |||  ||||||    
T  21348924 acacgtggccgccttattgacacgtgtacatgacaacacaacatgcaagaggacacattatcaccactaacagagcttttggacggagggaccattttga 21348825  T
Q  388 tggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 479  Q
    ||||||||||  ||||||| ||||||| | ||||||||||| |||| | ||||||| ||||||||  | | |||||||| |||| |||||||    
T  21348824 tggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcaaggacgaatttggccgattttttaaaattcaaggacaaatttga 21348733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 398 - 489
Target Start/End: Complemental strand, 23887289 - 23887198
Alignment:
Q  398 acaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatggttcactc 489  Q
    ||||||||| ||| ||| ||||||||||||||||||||||||||||||| ||||||   | |||||||| ||||||| |||||| |||||||    
T  23887289 acaaattcagggattaaattgatatttcgcataattgagggacgaagttagccgacccataaaaattcaaggacgaagttgatgattcactc 23887198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 398 - 489
Target Start/End: Complemental strand, 33111932 - 33111841
Alignment:
Q  398 acaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatggttcactc 489  Q
    ||||||||| ||| ||| |||||||||||||||||||||||| ||| ||| ||||   ||||||||||||||||||| |||||| |||||||    
T  33111932 acaaattcagggattaaattgatatttcgcataattgagggatgaatttgaccgagccgtgaaaattcagggacgaagttgatgattcactc 33111841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 398 - 489
Target Start/End: Complemental strand, 33851073 - 33850982
Alignment:
Q  398 acaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatggttcactc 489  Q
    |||||||||  || ||| ||||||||||| |||||||||||||||||||| |||||  ||||||||||||| ||||| |||||| |||||||    
T  33851073 acaaattcagagattaaattgatatttcggataattgagggacgaagttgaccgacccgtgaaaattcaggaacgaaattgatgattcactc 33850982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 398 - 489
Target Start/End: Complemental strand, 40508584 - 40508493
Alignment:
Q  398 acaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatggttcactc 489  Q
    ||||||||| ||| ||| |||| ||||||||||||| ||||||||| ||| |||||  ||||||||||||||||||| |||||| |||||||    
T  40508584 acaaattcagggattaaattgagatttcgcataattaagggacgaatttgtccgacccgtgaaaattcagggacgaagttgatgattcactc 40508493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 398 - 489
Target Start/End: Original strand, 48635373 - 48635464
Alignment:
Q  398 acaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatggttcactc 489  Q
    ||||||||| ||| ||| |||||||||||||||||| ||||||||| ||| ||||   ||||||||||||||||||| |||||| |||||||    
T  48635373 acaaattcagggattaaattgatatttcgcataattaagggacgaatttgaccgatccgtgaaaattcagggacgaaattgatgattcactc 48635464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 416 - 481
Target Start/End: Complemental strand, 18428822 - 18428757
Alignment:
Q  416 ttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatg 481  Q
    |||||||||||||||||||||||||||||||| |||||  || |||||||||||||||| ||||||    
T  18428822 ttgatatttcgcataattgagggacgaagttgaccgacccgtaaaaattcagggacgaagttgatg 18428757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 88 - 173
Target Start/End: Complemental strand, 54093096 - 54093011
Alignment:
Q  88 tcgccggagatgatgatgattttggaggggtgaaaatggaggaagttttagcgagaagaagaagggtcaaggacgtttttgatgtt 173  Q
    ||||||||||||||||||||||||||| ||||||||||  | | ||||||||| |||| |||| ||||| |||||||||| |||||    
T  54093096 tcgccggagatgatgatgattttggagaggtgaaaatgatgaaggttttagcgggaaggagaaaggtcatggacgttttttatgtt 54093011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 421 - 489
Target Start/End: Complemental strand, 40998583 - 40998515
Alignment:
Q  421 atttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatggttcactc 489  Q
    |||||||||||||||||||| || ||| |||||| |||||||||||||||| || ||||||||||||||    
T  40998583 atttcgcataattgagggactaatttgaccgacgcgtgaaaattcagggactaacttgatggttcactc 40998515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 366 - 479
Target Start/End: Complemental strand, 41977873 - 41977760
Alignment:
Q  366 ttggacggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattc 465  Q
    |||||||||| |||  |||||| |||||||||  ||||||| ||||||| ||||||||||||  |||| ||||||| | ||||||||  | | |||||||    
T  41977873 ttggacggagggaccattttgacggacgtctgtaaaattcagggactaatttgatatttcgccaaattcagggacgtatttggccgattttttaaaattc 41977774  T
Q  466 agggacgaatttga 479  Q
    | ||||||||||||    
T  41977773 aaggacgaatttga 41977760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 366 - 479
Target Start/End: Complemental strand, 54898560 - 54898447
Alignment:
Q  366 ttggacggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattc 465  Q
    |||||||||| |||  |||||||| |||||||  ||||||| ||||||| | ||||||||||| |||| ||||||||| ||| ||||  | | |||||||    
T  54898560 ttggacggagagaccattttgatgaacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaatttgaccgattttttaaaattc 54898461  T
Q  466 agggacgaatttga 479  Q
    | ||||||||||||    
T  54898460 aaggacgaatttga 54898447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 400 - 479
Target Start/End: Original strand, 38193510 - 38193589
Alignment:
Q  400 aaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 479  Q
    ||||||| ||||||| ||||||||||||| |||| ||||||||| ||||||||  | | |||||||| ||||||||||||    
T  38193510 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttga 38193589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 400 - 479
Target Start/End: Original strand, 41979352 - 41979431
Alignment:
Q  400 aaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 479  Q
    ||||||| ||||||| ||||||||||||| |||| ||||||||| ||||||||  | | |||||||| ||||||||||||    
T  41979352 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttga 41979431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 400 - 479
Target Start/End: Complemental strand, 46308896 - 46308817
Alignment:
Q  400 aaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 479  Q
    ||||||| ||||||| ||||||||||||| |||| ||||||||| ||||||||  | | |||||||| ||||||||||||    
T  46308896 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttga 46308817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 271 - 426
Target Start/End: Original strand, 48830732 - 48830887
Alignment:
Q  271 atcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaaggctaacagaggacttgga 370  Q
    ||||||||||||| |  |||||||| | |||| ||| |||| ||||| ||||||||| ||||||||| |||| ||||  |   |||||||||   |||||    
T  48830732 atcaaattagtccttgtacacgtggttgccttgttgacacgtgtacatgacaacacaacatgcaagaggacacatcatcaccactaacagagcttttgga 48830831  T
Q  371 cggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcg 426  Q
    ||||| |||  |||||||||||||| |  |||||||| |||||| | |||||||||    
T  48830832 cggagggaccattttgatggacgtccgtaaaattcaaagactaaatagatatttcg 48830887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 400 - 479
Target Start/End: Original strand, 53094273 - 53094352
Alignment:
Q  400 aaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 479  Q
    ||||||| ||||||| ||||||||||||| |||| ||||||||| ||||||||  | | |||||||| ||||||||||||    
T  53094273 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttga 53094352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 366 - 452
Target Start/End: Original strand, 3152239 - 3152325
Alignment:
Q  366 ttggacggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccga 452  Q
    |||||||||| |||   |||||||||||||||  ||||||| ||||||| ||||||||||||| |||| ||||| ||| ||||||||    
T  3152239 ttggacggagggacggatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggatgaaattggccga 3152325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 271 - 433
Target Start/End: Complemental strand, 42279725 - 42279563
Alignment:
Q  271 atcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaaggctaacagaggacttgga 370  Q
    ||||||||||||| |  ||||||| || |||| ||| |||| ||| ||||||||||| ||||||||| |||| ||||  |   |||||||||   |||||    
T  42279725 atcaaattagtccttgtacacgtgtctgccttgttgacacgtgtataagacaacacaacatgcaagaggacacatcatcaccactaacagagcttttgga 42279626  T
Q  371 cggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataatt 433  Q
    ||||| |||  ||||||| ||||||||  ||||||| ||||||| | ||||||| ||| ||||    
T  42279625 cggagggaccattttgatagacgtctgtaaaattcagggactaaatagatattttgcaaaatt 42279563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 398 - 447
Target Start/End: Complemental strand, 37865475 - 37865426
Alignment:
Q  398 acaaattcaaggactaagttgatatttcgcataattgagggacgaagttg 447  Q
    ||||||||| ||| ||| ||||||||||||||||||||||||||||||||    
T  37865475 acaaattcagggattaaattgatatttcgcataattgagggacgaagttg 37865426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 366 - 479
Target Start/End: Complemental strand, 44794330 - 44794218
Alignment:
Q  366 ttggacggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattc 465  Q
    |||||||||| |||   |||||||||| ||||  ||||||| ||||||| ||||||||||||| |||| ||||| ||| ||||||||  | | |||||||    
T  44794330 ttggacggagggacgaatttgatggacttctgcaaaattcagggactaatttgatatttcgcaaaattcagggatgaaattggccga-ttttcaaaattc 44794232  T
Q  466 agggacgaatttga 479  Q
    | ||||||||||||    
T  44794231 aaggacgaatttga 44794218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 400 - 479
Target Start/End: Complemental strand, 3150341 - 3150262
Alignment:
Q  400 aaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 479  Q
    ||||||| ||||||| ||||||||||||| |||| ||||||||| ||| ||||  | | |||||||| ||||||||||||    
T  3150341 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttga 3150262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 288 - 479
Target Start/End: Complemental strand, 43765338 - 43765147
Alignment:
Q  288 acacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaaggctaacagaggacttggacggagtgacatttttga 387  Q
    |||||||||| |||| ||| |||| ||||| ||||||||| |||| |||| |||| ||||  |   ||||| |||   ||||| |||| |||  ||||||    
T  43765338 acacgtggctgccttgttgacacgtgtacatgacaacacaacatgtaagaggacacatcatcaccactaacggagcttttggatggagggaccattttga 43765239  T
Q  388 tggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 479  Q
    ||||||||||  |||||||   ||||| | ||||||||||| ||||  || ||||| ||| ||||  | |||||||||| ||||||||||||    
T  43765238 tggacgtctgtaaaattcagaaactaaatagatatttcgcaaaattccggaacgaatttgaccgatttttgaaaattcaaggacgaatttga 43765147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 400 - 479
Target Start/End: Original strand, 54900074 - 54900153
Alignment:
Q  400 aaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 479  Q
    ||||||| |||| || ||||||||||||| |||| ||||||||| ||||||||  | | |||||||| ||||||||||||    
T  54900074 aaattcagggacaaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttga 54900153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 172
Target Start/End: Original strand, 26449016 - 26449098
Alignment:
Q  90 gccggagatgatgatgattttggaggggtgaaaatggaggaagttttagcgagaagaagaagggtcaaggacgtttttgatgt 172  Q
    ||||||||||||||||||||||||| |||||| |||| | | |||||||||  ||| |||| ||||| | |||| ||||||||    
T  26449016 gccggagatgatgatgattttggagaggtgaagatggtgaaggttttagcggaaaggagaaaggtcaggaacgtgtttgatgt 26449098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 366 - 452
Target Start/End: Original strand, 35905733 - 35905819
Alignment:
Q  366 ttggacggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccga 452  Q
    |||||||||| |||  |||||||| |||||||  ||||||| ||||||| | ||||||||||| |||| ||||||||| ||| ||||    
T  35905733 ttggacggagggaccattttgatgaacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaatttgaccga 35905819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 402 - 475
Target Start/End: Complemental strand, 24381831 - 24381758
Alignment:
Q  402 attcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaat 475  Q
    |||||| || ||| |||||||||||||||||||||||| ||| ||||||||   || |||||||| ||||||||    
T  24381831 attcaaagattaaattgatatttcgcataattgagggatgaatttggccgatccgtaaaaattcaaggacgaat 24381758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 399 - 476
Target Start/End: Complemental strand, 31885608 - 31885531
Alignment:
Q  399 caaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatt 476  Q
    |||||||||| ||||| |||||||||||||||||| ||||| ||| ||| |||||  || ||||| || |||||||||    
T  31885608 caaattcaagtactaaattgatatttcgcataattaagggatgaatttgaccgacccgtaaaaatccaaggacgaatt 31885531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 400 - 489
Target Start/End: Complemental strand, 41944665 - 41944576
Alignment:
Q  400 aaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatggttcactc 489  Q
    ||||||| ||||||  |||||||||||   ||||| |||||||| ||||||||    |||||||||||||||||| ||||||||| ||||    
T  41944665 aaattcagggactattttgatatttcgttaaattgggggacgaatttggccgatccctgaaaattcagggacgaaattgatggtttactc 41944576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 175 - 211
Target Start/End: Original strand, 51454066 - 51454102
Alignment:
Q  175 tgaaatgtgaagaaggaggtatgggtaatgcaggggc 211  Q
    ||||||||||||||||||||||| |||||||||||||    
T  51454066 tgaaatgtgaagaaggaggtatgtgtaatgcaggggc 51454102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 400 - 479
Target Start/End: Original strand, 2661908 - 2661987
Alignment:
Q  400 aaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 479  Q
    ||||||| ||||||| ||||||||||||| |||| | ||||||| |||| |||  | | |||||||| ||||||||||||    
T  2661908 aaattcatggactaatttgatatttcgcaaaattcacggacgaaattggtcgatttttcaaaattcaaggacgaatttga 2661987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 398 - 489
Target Start/End: Complemental strand, 2975551 - 2975460
Alignment:
Q  398 acaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatggttcactc 489  Q
    ||||||||| ||| ||| |||||||||||||| ||||||||| ||| || || ||   || |||||||| ||||||||||| || |||||||    
T  2975551 acaaattcagggattaaattgatatttcgcatcattgagggatgaatttagctgatccgtaaaaattcaaggacgaatttggtgattcactc 2975460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 400 - 479
Target Start/End: Complemental strand, 38191984 - 38191905
Alignment:
Q  400 aaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 479  Q
    ||||||| ||||||| ||||||||||||| |||| ||||||||| |||||| |  | | |||||| | ||||||||||||    
T  38191984 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccaatttttcaaaatttaaggacgaatttga 38191905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 400 - 479
Target Start/End: Original strand, 44795890 - 44795969
Alignment:
Q  400 aaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 479  Q
    ||||||| ||||||| ||||||||||||| |||| ||| ||||| || |||||  | | |||||||| ||||||||||||    
T  44795890 aaattcatggactaatttgatatttcgcaaaattcaggaacgaaattagccgatttttcaaaattcaaggacgaatttga 44795969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 400 - 479
Target Start/End: Original strand, 46310436 - 46310515
Alignment:
Q  400 aaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 479  Q
    ||||||| ||||||| ||||||||||||| |||| ||||||||| ||| ||||  | | ||||||||  |||||||||||    
T  46310436 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaagacgaatttga 46310515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 400 - 479
Target Start/End: Complemental strand, 53187831 - 53187752
Alignment:
Q  400 aaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 479  Q
    ||||||| ||||||| ||||||||||||| |||| ||||||||| ||| ||||  | | |||||||| |||| |||||||    
T  53187831 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacaaatttga 53187752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 271 - 336
Target Start/End: Original strand, 7884800 - 7884865
Alignment:
Q  271 atcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaag 336  Q
    ||||| ||||||| || ||| |||||| |||| ||| |||| ||||||||||||||| ||||||||    
T  7884800 atcaatttagtccttatacatgtggctgccttgttgacacgtgtacaagacaacacaacatgcaag 7884865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 366 - 443
Target Start/End: Original strand, 19987615 - 19987692
Alignment:
Q  366 ttggacggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaa 443  Q
    |||||||||| |||   |||||||||||| ||  ||||| | ||||||| ||||||||||||| |||| |||||||||    
T  19987615 ttggacggagggactgatttgatggacgtgtgtaaaatttagggactaatttgatatttcgcaaaattcagggacgaa 19987692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 400 - 477
Target Start/End: Complemental strand, 23291659 - 23291582
Alignment:
Q  400 aaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaattt 477  Q
    |||||||  |||||| | ||||||||||| |||| ||||||||| ||||||||  | | |||||||| ||||||||||    
T  23291659 aaattcagagactaaatagatatttcgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaattt 23291582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 382 - 479
Target Start/End: Complemental strand, 46112594 - 46112497
Alignment:
Q  382 ttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 479  Q
    ||||||||||||||||  ||||||| ||||||| | ||||||| ||| |||| |   ||||| ||||||||  | | |||||||| ||||||||||||    
T  46112594 ttttgatggacgtctgtaaaattcatggactaaatagatattttgcaaaattcaataacgaatttggccgattttttaaaattcaaggacgaatttga 46112497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 188; Significance: 1e-101; HSPs: 66)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 252 - 489
Target Start/End: Complemental strand, 2827641 - 2827407
Alignment:
Q  252 ctcaacattttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaa 351  Q
    ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||    
T  2827641 ctcaacatttttcaattcaatcaaattagtccctgaacacgtggcttccttcttgccacgcgtacaagacaacacatcatgcaagacgacagatcagcaa 2827542  T
Q  352 ggctaacagaggacttggacggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccg 451  Q
    ||||||| |||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||   ||||||||    
T  2827541 ggctaacggaggacttggacggagggacctttttgatggacgtctgacaaattcaaggactaagttgatatttcacataattgagggac---gttggccg 2827445  T
Q  452 acgtgtgaaaattcagggacgaatttgatggttcactc 489  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  2827444 acgtgtgaaaatttagggacgaatttgatggttcactc 2827407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 178; E-Value: 1e-95
Query Start/End: Original strand, 18 - 211
Target Start/End: Complemental strand, 2827876 - 2827683
Alignment:
Q  18 acttgataaacaacaggaaagatgttacctttaatcacaatcgaacacacaaacttcaaaaatgtcagaatcgccggagatgatgatgattttggagggg 117  Q
    ||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2827876 acttgataaacaacaggaaaggtgttacctttaatcacaaccgaacacacaaacttcaaaaatgtcagaatcgccggagatgatgatgattttggagggg 2827777  T
Q  118 tgaaaatggaggaagttttagcgagaagaagaagggtcaaggacgtttttgatgttctgaaatgtgaagaaggaggtatgggtaatgcaggggc 211  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||    
T  2827776 tgaaaatggaggaagttttagcgagaagaagaagggtcaaggacgtttttgattttctgaaatgtggagaaggaggtatgggtaatgcaggggc 2827683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 143; E-Value: 9e-75
Query Start/End: Original strand, 259 - 489
Target Start/End: Original strand, 44558387 - 44558617
Alignment:
Q  259 ttttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaaggctaac 358  Q
    ||||| ||||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||||| |||||||| |  |||||||||| | |||||||    
T  44558387 ttttcaaattcaatcaaatgagtccttgaacacgtggcttccttcttgccacgcgtacaagacaacagagcatgcatggtgacagatcagcatggctaac 44558486  T
Q  359 agaggacttggacggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtg 458  Q
    | || |||||||||||  ||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| |||||||||  |||    
T  44558487 atagcacttggacggaaggacctttttgatggacgtctgacaaattcagggactaagttgatatttcgcataattgagggatgaatttggccgacccgtg 44558586  T
Q  459 aaaattcagggacgaatttgatggttcactc 489  Q
    |||||||| ||||||| ||||||||||||||    
T  44558587 aaaattcaaggacgaagttgatggttcactc 44558617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 259 - 489
Target Start/End: Original strand, 44794654 - 44794884
Alignment:
Q  259 ttttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaaggctaac 358  Q
    |||||||| ||||||||||| |||||| |||||||||||||||||||||||||||||||||||| ||||||||||||| |||||  |||| | |||||||    
T  44794654 ttttccaaatcaatcaaattcgtccctgaacacgtggcttccttcttgccacgcgtacaagacatcacagcatgcaaggcgacatgtcagcatggctaac 44794753  T
Q  359 agaggacttggacggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtg 458  Q
     |||  | |  |||||| ||| |||||||||||||||||| ||||||| ||| ||| |||||||||||||||||||||||||||| ||| ||||||||||    
T  44794754 ggagcccgttaacggagggacctttttgatggacgtctgataaattcagggattaaattgatatttcgcataattgagggacgaatttgaccgacgtgtg 44794853  T
Q  459 aaaattcagggacgaatttgatggttcactc 489  Q
    ||||||||||||| || ||||||||||||||    
T  44794854 aaaattcagggactaaattgatggttcactc 44794884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 270 - 489
Target Start/End: Original strand, 10372611 - 10372830
Alignment:
Q  270 aatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaaggctaacagaggacttgg 369  Q
    ||||||||| |||||| ||||||||||||| |||||||||||||||||||||| ||||||||||||| |||||  |||| | ||||||| |||  | |      
T  10372611 aatcaaattcgtccctgaacacgtggcttctttcttgccacgcgtacaagacagcacagcatgcaaggcgacatgtcagcatggctaacggagtccgtta 10372710  T
Q  370 acggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcaggg 469  Q
    |||||| ||| |||||||||||||||||||||||||| |||  || ||||||||||||||||||||||||| || |||||||||| ||||||||||||||    
T  10372711 acggagggacctttttgatggacgtctgacaaattcagggatgaaattgatatttcgcataattgagggactaatttggccgacgcgtgaaaattcaggg 10372810  T
Q  470 acgaatttgatggttcactc 489  Q
    ||||||||||||||||||||    
T  10372811 acgaatttgatggttcactc 10372830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 123; E-Value: 8e-63
Query Start/End: Original strand, 259 - 489
Target Start/End: Complemental strand, 10762811 - 10762581
Alignment:
Q  259 ttttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaaggctaac 358  Q
    |||||||| ||||||||||| |||||| ||||||||||||||||||||||||||||||| |||| |||||||||| || |||||  |||| | |||||||    
T  10762811 ttttccaaatcaatcaaattcgtccctgaacacgtggcttccttcttgccacgcgtacaggacagcacagcatgccaggcgacatgtcagcatggctaac 10762712  T
Q  359 agaggacttggacggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtg 458  Q
     |||  | |  |||||| ||| |||||||||||||||||||||||||| |||  || |||| |||||||||||||||||||| || |||||||||| |||    
T  10762711 ggagcccgttaacggagggacctttttgatggacgtctgacaaattcagggatgaaattgaaatttcgcataattgagggactaatttggccgacgcgtg 10762612  T
Q  459 aaaattcagggacgaatttgatggttcactc 489  Q
    |||||||||||||||||||||||||||||||    
T  10762611 aaaattcagggacgaatttgatggttcactc 10762581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 123; E-Value: 8e-63
Query Start/End: Original strand, 259 - 489
Target Start/End: Original strand, 51041825 - 51042054
Alignment:
Q  259 ttttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaaggctaac 358  Q
    ||||||||||||||||||||||||| | |||| |||||||||||||||||||| ||| ||||||||||| |||||| | ||||||||||| | |||||||    
T  51041825 ttttccaattcaatcaaattagtccttgaacatgtggcttccttcttgccacgtgtataagacaacacaacatgcagggcgacagatcagcatggctaac 51041924  T
Q  359 agaggacttggacggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtg 458  Q
    | || ||||||| |||| ||| |||||||| ||||||||||||||||| |||||||||||||||||| ||||||||||||| ||| ||| ||||| |||     
T  51041925 aaagcacttggatggagggacctttttgat-gacgtctgacaaattcatggactaagttgatatttcacataattgagggatgaatttgaccgacctgta 51042023  T
Q  459 aaaattcagggacgaatttgatggttcactc 489  Q
    |||||| | |||||||||||| |||||||||    
T  51042024 aaaatttaaggacgaatttgacggttcactc 51042054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 265 - 435
Target Start/End: Complemental strand, 27625030 - 27624860
Alignment:
Q  265 aattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaaggctaacagagga 364  Q
    ||||||||||||||||||| | |||||||||||||||||||||||| |||||||||||||| |||||||| | ||||||||||  | ||||||||||| |    
T  27625030 aattcaatcaaattagtccttgaacacgtggcttccttcttgccacacgtacaagacaacaaagcatgcatggcgacagatcaacatggctaacagagca 27624931  T
Q  365 cttggacggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattga 435  Q
    ||| |||||| |||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  27624930 ctttgacggaatgacctttttgatggacgtctgacaaattcagggactaagttgatatttcgcataattga 27624860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 259 - 489
Target Start/End: Complemental strand, 35996293 - 35996063
Alignment:
Q  259 ttttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaaggctaac 358  Q
    ||||||||||||||||||||||||| | ||||||||||||||||||||||||| ||||||||||||||| |||||| | |||||  |||| | |||||||    
T  35996293 ttttccaattcaatcaaattagtccttgaacacgtggcttccttcttgccacgtgtacaagacaacacaacatgcatggcgacatgtcagcatggctaac 35996194  T
Q  359 agaggacttggacggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtg 458  Q
     ||| |||||||||||| ||| |||||||||||||||||| ||||||| ||| ||| ||||||||| ||| |||||||||||||| ||| |||||   |     
T  35996193 ggagcacttggacggagggacctttttgatggacgtctgataaattcagggattaaattgatattttgcacaattgagggacgaatttgaccgacccata 35996094  T
Q  459 aaaattcagggacgaatttgatggttcactc 489  Q
    ||||| ||| ||| || ||||||||||||||    
T  35996093 aaaatccagagactaaattgatggttcactc 35996063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 259 - 489
Target Start/End: Original strand, 2350398 - 2350631
Alignment:
Q  259 ttttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaaga---caacacagcatgcaagacgacagatcaggaaggct 355  Q
    ||||||||||||||||||||||||| | ||||||||||||||||||||||||| ||||||||   ||||||||||||||   |||||  |||| | ||||    
T  2350398 ttttccaattcaatcaaattagtccttgaacacgtggcttccttcttgccacgtgtacaagagtacaacacagcatgcagagcgacatgtcagcatggct 2350497  T
Q  356 aacagaggacttggacggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgt 455  Q
    ||| ||| |||||||| ||| ||| ||||||||| |||||||| |||||||  || ||| ||||||||||||||||||||||||| || |||||||||      
T  2350498 aacggagcacttggacagagggacctttttgatgaacgtctgataaattcagagattaaattgatatttcgcataattgagggacaaatttggccgaccc 2350597  T
Q  456 gtgaaaattcagggacgaatttgatggttcactc 489  Q
     ||||||||||||||| || ||||||||||||||    
T  2350598 atgaaaattcagggactaaattgatggttcactc 2350631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 259 - 489
Target Start/End: Complemental strand, 47942041 - 47941811
Alignment:
Q  259 ttttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaaggctaac 358  Q
    |||||||| ||||||||||| |||| | |||||||||||||||||||||||||||||||||||| |||| |||||||| |||||  |||| | |||||||    
T  47942041 ttttccaaatcaatcaaattcgtccttgaacacgtggcttccttcttgccacgcgtacaagacagcacaacatgcaaggcgacatgtcagcatggctaac 47941942  T
Q  359 agaggacttggacggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtg 458  Q
     |||  | |  |||||| ||| |||||||||||||||||| ||||||| ||| ||| ||||||||||||||||||||| |||||| ||| |||||  ||     
T  47941941 ggagcccgttaacggagggacctttttgatggacgtctgataaattcagggattaaattgatatttcgcataattgagagacgaatttgaccgacccgta 47941842  T
Q  459 aaaattcagggacgaatttgatggttcactc 489  Q
    ||||||||||||| || ||||||||||||||    
T  47941841 aaaattcagggactaaattgatggttcactc 47941811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 271 - 489
Target Start/End: Complemental strand, 4519594 - 4519376
Alignment:
Q  271 atcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaaggctaacagaggacttgga 370  Q
    ||||||||||||| | |||||||| ||| ||| |||||||| |||||||||||||||||||||| | ||||||||||| | ||||||| ||| | |||||    
T  4519594 atcaaattagtccttgaacacgtgactttctttttgccacgtgtacaagacaacacagcatgcagggcgacagatcagcatggctaacggagcatttgga 4519495  T
Q  371 cggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcaggga 470  Q
    ||||| ||| ||||||||| | |||| |||||||||| | ||||| ||||||||||||||||||||||| ||| |||||| ||  || |||||||| |||    
T  4519494 cggagggacctttttgatgaatgtctaacaaattcaaaggctaagctgatatttcgcataattgagggatgaatttggccaaccggtaaaaattcaagga 4519395  T
Q  471 cgaatttgatggttcactc 489  Q
    |||||||||| ||||||||    
T  4519394 cgaatttgattgttcactc 4519376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 19 - 211
Target Start/End: Original strand, 2350158 - 2350355
Alignment:
Q  19 cttgataaacaacaggaaagatgttacctttaatcacaatcgaacacacaaacttcaaaaatgtcagaatcgccggagatgatgatgattttggaggggt 118  Q
    |||||||||||| ||||||   ||||||||| |||||| | |||||||  ||||||||||| ||||||||||||||||||||| ||||||||||||||||    
T  2350158 cttgataaacaaaaggaaatgcgttacctttgatcacagttgaacacaggaacttcaaaaacgtcagaatcgccggagatgattatgattttggaggggt 2350257  T
Q  119 gaaaatggaggaagttttagcgagaagaagaagggtcaaggacgtttttgatgtt-----ctgaaatgtgaagaaggaggtatgggtaatgcaggggc 211  Q
    || ||||||| ||||||||| | |||| ||||| |||||||| ||||||||||||     |||||||||||||||||||| ||  |||||||||||||    
T  2350258 gagaatggagaaagttttagtgggaaggagaagagtcaaggatgtttttgatgtttctaactgaaatgtgaagaaggaggaatatgtaatgcaggggc 2350355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 19 - 211
Target Start/End: Complemental strand, 35996540 - 35996343
Alignment:
Q  19 cttgataaacaacaggaaagatgttacctttaatcacaatcgaacacacaaacttcaaaaatgtcagaatcgccggagatgatgatgattttggaggggt 118  Q
    |||||||||||| |||||||   |||||||| |||||||||||||||   ||||||||||| |||||||||| |||||||||||||||||||||||||||    
T  35996540 cttgataaacaaaaggaaaggcattacctttgatcacaatcgaacacgggaacttcaaaaacgtcagaatcggcggagatgatgatgattttggaggggt 35996441  T
Q  119 gaaaatggaggaagttttagcgagaagaagaagggtcaaggacgtttttgatgtt-----ctgaaatgtgaagaaggaggtatgggtaatgcaggggc 211  Q
    || | ||||| ||||||||||| |||| ||||| |||||  | ||||||||||||     |||||||||||||||||||| ||  |||||||||||||    
T  35996440 gagactggagaaagttttagcgggaaggagaagagtcaaatatgtttttgatgtttctgactgaaatgtgaagaaggaggaatatgtaatgcaggggc 35996343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 18 - 211
Target Start/End: Complemental strand, 27625269 - 27625070
Alignment:
Q  18 acttgataaacaacaggaaagatgttaccttt---aatcacaatcgaacacacaaacttcaaaaatgtcagaatcgccggagatgatgatgattttggag 114  Q
    |||||| ||||||||||||||| |||||||||   ||  |||| |||||||| |||||||||||| |||||||||  |||||||||||||||||||||||    
T  27625269 acttgacaaacaacaggaaagacgttacctttttgaa--acaaccgaacacagaaacttcaaaaacgtcagaatcatcggagatgatgatgattttggag 27625172  T
Q  115 gggtgaaaatggaggaagttttagcgagaagaagaagggtcaaggacgtttttgatgtt-----ctgaaatgtgaagaaggaggtatgggtaatgcaggg 209  Q
    |||||| ||||||  ||||||||| | |||| ||||||||||| ||||||||| || ||     ||||||| ||||||||||||||||||||||||||||    
T  27625171 gggtgagaatggataaagttttagtgggaaggagaagggtcaatgacgttttttatttttctgactgaaatctgaagaaggaggtatgggtaatgcaggg 27625072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 18 - 210
Target Start/End: Original strand, 44558137 - 44558335
Alignment:
Q  18 acttgataaacaacaggaaagatgttaccttt---aatcacaatcgaacacacaaacttcaaaaatgtcagaatcgccggagatgatgatgattttggag 114  Q
    |||||||||||||||| ||||| |||||||||   ||  |||| |||||||| |||||||||||| |||||||||  || ||||||||||||||||||||    
T  44558137 acttgataaacaacagaaaagacgttacctttttgaa--acaaccgaacacagaaacttcaaaaacgtcagaatcatcgaagatgatgatgattttggag 44558234  T
Q  115 gggtgaaaatggaggaagttttagcgagaagaagaagggtcaaggacgtttttgatgtt-----ctgaaatgtgaagaaggaggtatgggtaatgcaggg 209  Q
    |||||| ||||||   |||||||| | |||| |||||||||||||||||||||||| ||     ||||||||| ||||||||||||||||||||||||||    
T  44558235 gggtgagaatggatagagttttagtgggaaggagaagggtcaaggacgtttttgatttttctgactgaaatgtaaagaaggaggtatgggtaatgcaggg 44558334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 512 - 689
Target Start/End: Complemental strand, 39607482 - 39607298
Alignment:
Q  512 tagtagtcaatgtttgaactcggaccttcaatatattatgcgcattgtatcaatg--------ctcacgagaacactgacaataatctccaattgtgcag 603  Q
    ||||||||| |||||||||||| |||||||||||||||||||||||||||||||         |||||||| ||||| |||||||||||||||| || |     
T  39607482 tagtagtcagtgtttgaactcgaaccttcaatatattatgcgcattgtatcaatcgagctgaactcacgaggacactcacaataatctccaattatgtaa 39607383  T
Q  604 tatgttaggagaaatagtcaccaatgttnnnnnnnnnnntgttaataatgtcatattatttacaatcgtattagttcttataatgt 689  Q
    ||||||||||||||||||||||||||||           |||||||||||||||||||||||||||||||||||||||||||||||    
T  39607382 tatgttaggagaaatagtcaccaatgttaaaaaaaaat-tgttaataatgtcatattatttacaatcgtattagttcttataatgt 39607298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 35 - 211
Target Start/End: Original strand, 10372339 - 10372520
Alignment:
Q  35 aaagatgttacctttaatcacaatcgaacacacaaacttcaaaaatgtcagaatcgccggagatgatgatgattttggaggggtgaaaatggaggaagtt 134  Q
    |||| |||||||||| |||||| |||||||||  ||||||||||||| ||||||||  |||||||||||||||||||||||||||| ||||||| | |||    
T  10372339 aaaggtgttacctttgatcacagtcgaacacaggaacttcaaaaatgccagaatcgatggagatgatgatgattttggaggggtgacaatggagaatgtt 10372438  T
Q  135 ttagcgagaagaagaagggtcaaggacgtttttgatgtt-----ctgaaatgtgaagaaggaggtatgggtaatgcaggggc 211  Q
    |||||| |||| ||||| |||||||| ||||||||||||      | ||||||||||||||||| ||  |||||||||||||    
T  10372439 ttagcgggaaggagaagagtcaaggatgtttttgatgtttctaagtaaaatgtgaagaaggaggaatatgtaatgcaggggc 10372520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 19 - 211
Target Start/End: Complemental strand, 10763058 - 10762861
Alignment:
Q  19 cttgataaacaacaggaaagatgttacctttaatcacaatcgaacacacaaacttcaaaaatgtcagaatcgccggagatgatgatgattttggaggggt 118  Q
    ||||||||||   ||||||| |||||||||| |||||  |||||||||  ||||||||| | | ||||||||  ||||||||||||||||||||||||||    
T  10763058 cttgataaactcaaggaaaggtgttacctttgatcacggtcgaacacaggaacttcaaacacgccagaatcgatggagatgatgatgattttggaggggt 10762959  T
Q  119 gaaaatggaggaagttttagcgagaagaagaagggtcaaggacgtttttgatgtt-ctga----aatgtgaagaaggaggtatgggtaatgcaggggc 211  Q
    || ||||||| | ||||||||| |||| ||||| |||||||| |||||||||||| ||||    |||||||||||| ||| ||  |||||||||||||    
T  10762958 gacaatggagaacgttttagcgggaaggagaagagtcaaggatgtttttgatgtttctgagtaaaatgtgaagaagaaggaatatgtaatgcaggggc 10762861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 86 - 203
Target Start/End: Complemental strand, 4519778 - 4519656
Alignment:
Q  86 aatcgccggagatgatgatgattttggaggggtgaaaatggaggaagttttagcgagaagaagaagggtcaaggacgtttttgatgtt-----ctgaaat 180  Q
    ||||||||||||||||||||||||||||| ||||| ||||||| ||||||||||| ||||||||||||||||||| ||||||||||||      ||||||    
T  4519778 aatcgccggagatgatgatgattttggagaggtgagaatggagaaagttttagcgggaagaagaagggtcaaggatgtttttgatgtttctgagtgaaat 4519679  T
Q  181 gtgaagaaggaggtatgggtaat 203  Q
    |||| |||||||||||| |||||    
T  4519678 gtgaggaaggaggtatgagtaat 4519656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 398 - 489
Target Start/End: Original strand, 39923007 - 39923098
Alignment:
Q  398 acaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatggttcactc 489  Q
    ||||||||| ||| ||| |||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| ||||||||||||||    
T  39923007 acaaattcagggattaaattgatatttcgcataattgagggacgaagttggccgacctgtaaaaattcagggacgaaattgatggttcactc 39923098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 84 - 211
Target Start/End: Original strand, 51041645 - 51041777
Alignment:
Q  84 agaatcgccggagatgatgatgattttggaggggtgaaaatggaggaagttttagc-gagaagaagaagggtcaaggacgtttttgatgtt-----ctga 177  Q
    ||||||| ||||||||||||||||||||||||||||| ||||||| ||| |||||| | |||| ||||||||||| |||||||||||||||      |||    
T  51041645 agaatcgtcggagatgatgatgattttggaggggtgagaatggagaaagctttagcggggaaggagaagggtcaatgacgtttttgatgtttctgagtga 51041744  T
Q  178 aatgtgaagaaggaggtatgggtaatgcaggggc 211  Q
    ||||||||||| | ||||||||||||||||||||    
T  51041745 aatgtgaagaaag-ggtatgggtaatgcaggggc 51041777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 398 - 489
Target Start/End: Complemental strand, 42879366 - 42879275
Alignment:
Q  398 acaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatggttcactc 489  Q
    ||||||||| ||| ||| ||||||||||||||||||||||||||||||||||||||  || |||||||||||||||| |||||| |||||||    
T  42879366 acaaattcatggattaaattgatatttcgcataattgagggacgaagttggccgacccgtaaaaattcagggacgaagttgatgattcactc 42879275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 398 - 489
Target Start/End: Original strand, 2828411 - 2828502
Alignment:
Q  398 acaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatggttcactc 489  Q
    ||||||||||||| ||| ||||||||||||||||||||||||| ||||||||||||   | |||||||||||||||| |||||| |||||||    
T  2828411 acaaattcaaggattaaattgatatttcgcataattgagggacaaagttggccgacccataaaaattcagggacgaagttgatgattcactc 2828502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 398 - 489
Target Start/End: Original strand, 39085152 - 39085243
Alignment:
Q  398 acaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatggttcactc 489  Q
    ||||||||| ||| ||| |||||||||||||||||||||||||||||||| |||||  || |||||||||||||||| |||||| |||||||    
T  39085152 acaaattcatggattaaattgatatttcgcataattgagggacgaagttgaccgacccgtaaaaattcagggacgaagttgatgattcactc 39085243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 398 - 489
Target Start/End: Complemental strand, 44992899 - 44992808
Alignment:
Q  398 acaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatggttcactc 489  Q
    ||||| ||| ||| ||| ||||||||||||||||||||||||||||||||||||||  || |||||||||||||||| |||||| |||||||    
T  44992899 acaaactcagggattaaattgatatttcgcataattgagggacgaagttggccgacccgtaaaaattcagggacgaagttgatgattcactc 44992808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 398 - 489
Target Start/End: Complemental strand, 10371148 - 10371057
Alignment:
Q  398 acaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatggttcactc 489  Q
    ||||||||| |||  || ||||||||||||||||||||||||| || || ||||||| |||||||||||||||| || ||||||||||||||    
T  10371148 acaaattcagggatgaaattgatatttcgcataattgagggactaatttagccgacgcgtgaaaattcagggactaagttgatggttcactc 10371057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 288 - 479
Target Start/End: Original strand, 41761669 - 41761860
Alignment:
Q  288 acacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaaggctaacagaggacttggacggagtgacatttttga 387  Q
    ||||||| || |||| ||| |||| ||||| || |||||||||||||||| |||| ||||  |   |||||  ||   |||||||||| |||  ||||||    
T  41761669 acacgtgactgccttgttgacacgtgtacatgagaacacagcatgcaagaggacacatcatcaccactaacgaagcttttggacggagggaccattttga 41761768  T
Q  388 tggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 479  Q
    ||||||||||  ||||||| ||||||| | ||||||||||| ||||  |||||||| ||||||||  | |||||||||| ||||||||||||    
T  41761769 tggacgtctgtaaaattcagggactaaatagatatttcgcaaaatttcgggacgaatttggccgatttttgaaaattcaaggacgaatttga 41761860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 384 - 489
Target Start/End: Complemental strand, 39083744 - 39083639
Alignment:
Q  384 ttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatggt 483  Q
    ||||||||||||  ||||||||| ||||||  |||||||||||   |||| ||||||||| |||||||||   |||||||||||||||||| ||||||||    
T  39083744 ttgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggccgacccctgaaaattcagggacgaaattgatggt 39083645  T
Q  484 tcactc 489  Q
    ||||||    
T  39083644 tcactc 39083639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 398 - 489
Target Start/End: Original strand, 4520451 - 4520542
Alignment:
Q  398 acaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatggttcactc 489  Q
    ||||||||||| |||||||||||||||||||||||||| ||| ||| |||||||||   | |||||||| ||||||| |||||| |||||||    
T  4520451 acaaattcaagaactaagttgatatttcgcataattgatggatgaatttggccgactcataaaaattcaaggacgaagttgatgattcactc 4520542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 398 - 489
Target Start/End: Complemental strand, 43778480 - 43778389
Alignment:
Q  398 acaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatggttcactc 489  Q
    ||||||| | ||| ||| |||||||||||||||||||||||||||||||| |||||  || |||||||| ||||||| |||||| |||||||    
T  43778480 acaaatttagggattaaattgatatttcgcataattgagggacgaagttgaccgacccgtaaaaattcaaggacgaagttgatgattcactc 43778389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 398 - 481
Target Start/End: Complemental strand, 44793025 - 44792942
Alignment:
Q  398 acaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatg 481  Q
    ||||||||| ||| ||| |||||||||||||||||||||||||||| |||||||||  |||| ||||||||||| || ||||||    
T  44793025 acaaattcagggattaaattgatatttcgcataattgagggacgaatttggccgacccgtgataattcagggactaagttgatg 44792942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 93 - 211
Target Start/End: Original strand, 44794481 - 44794604
Alignment:
Q  93 ggagatgatgatgattttggaggggtgaaaatggaggaagttttagcgagaagaagaagggtcaaggacgtttttgatgtt-ctga----aatgtgaaga 187  Q
    |||||| ||||||||||||||||||||| ||||||| | ||||||||| |||| ||||| ||||| || |||||| ||||| ||||    ||||||||||    
T  44794481 ggagattatgatgattttggaggggtgacaatggagaacgttttagcgggaaggagaagagtcaaagatgtttttaatgtttctgagtaaaatgtgaaga 44794580  T
Q  188 aggaggtatgggtaatgcaggggc 211  Q
    |||||| ||  |||||||||||||    
T  44794581 aggaggaatatgtaatgcaggggc 44794604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 384 - 489
Target Start/End: Complemental strand, 39921599 - 39921494
Alignment:
Q  384 ttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatggt 483  Q
    ||||||||||||  ||||||||| ||||||  |||||||||||   ||||  |||||||| |||||||||   |||||||||||||||||| ||||||||    
T  39921599 ttgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttggggacgaatttggccgacccctgaaaattcagggacgaaattgatggt 39921500  T
Q  484 tcactc 489  Q
    ||||||    
T  39921499 tcactc 39921494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 366 - 479
Target Start/End: Complemental strand, 43519547 - 43519434
Alignment:
Q  366 ttggacggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattc 465  Q
    |||||||||| |||   |||||||||||| ||  ||||||| ||||||| ||||||||||||| |||| ||||||||| ||||||||  | | |||||||    
T  43519547 ttggacggagggacggatttgatggacgtttgtaaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattc 43519448  T
Q  466 agggacgaatttga 479  Q
    | ||||||||||||    
T  43519447 aaggacgaatttga 43519434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 421 - 489
Target Start/End: Original strand, 10767973 - 10768041
Alignment:
Q  421 atttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatggttcactc 489  Q
    |||||||||||||||||||| || |||||||||| ||||||||||||| || || ||||||||||||||    
T  10767973 atttcgcataattgagggactaatttggccgacgcgtgaaaattcaggaactaacttgatggttcactc 10768041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 384 - 488
Target Start/End: Complemental strand, 39189487 - 39189383
Alignment:
Q  384 ttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatggt 483  Q
    ||||||||||||  ||||||||| ||||||  |||||||||||   ||||  |||||||| |||||||||   |||||||||||||||||| ||||||||    
T  39189487 ttgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttggggacgaatttggccgacccctgaaaattcagggacgaaattgatggt 39189388  T
Q  484 tcact 488  Q
    |||||    
T  39189387 tcact 39189383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 398 - 489
Target Start/End: Original strand, 35997767 - 35997858
Alignment:
Q  398 acaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatggttcactc 489  Q
    ||||||||| ||| ||| ||||||||||  |||||||||| ||||| |||||||||  |||||||||||||||| || |||||| |||||||    
T  35997767 acaaattcagggattaaattgatatttcttataattgaggaacgaatttggccgacccgtgaaaattcagggacaaagttgatgattcactc 35997858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 398 - 489
Target Start/End: Original strand, 47942746 - 47942837
Alignment:
Q  398 acaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatggttcactc 489  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||| ||| |||||  |||| |||||| | || || |||||| |||||||    
T  47942746 acaaattcaaggattaaattgatatttcgcataattgagggacgaatttgaccgacccgtgataattcatgaactaagttgatgattcactc 47942837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 384 - 489
Target Start/End: Original strand, 42880774 - 42880879
Alignment:
Q  384 ttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatggt 483  Q
    ||||||||||||  ||||||||| ||||||  |||||||||||   ||||  |||||||| |||||||||   ||||||||||||||| || ||||||||    
T  42880774 ttgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttggggacgaatttggccgacccctgaaaattcagggacaaaattgatggt 42880873  T
Q  484 tcactc 489  Q
    ||||||    
T  42880874 tcactc 42880879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 384 - 489
Target Start/End: Original strand, 43779886 - 43779991
Alignment:
Q  384 ttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatggt 483  Q
    ||||||||||||  ||||||||| ||||||  |||||||||||   ||||  |||||||| |||||||||   |||||||||||||||||| |||| |||    
T  43779886 ttgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttggggacgaatttggccgacccctgaaaattcagggacgaaattgaaggt 43779985  T
Q  484 tcactc 489  Q
    ||||||    
T  43779986 tcactc 43779991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 271 - 347
Target Start/End: Original strand, 2693159 - 2693235
Alignment:
Q  271 atcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatca 347  Q
    ||||||||||||| |  |||||||||| |||||||| |||| ||||| ||||||||||||||||||| |||| ||||    
T  2693159 atcaaattagtccttgtacacgtggctgccttcttgacacgtgtacaggacaacacagcatgcaagatgacacatca 2693235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 384 - 484
Target Start/End: Complemental strand, 32652204 - 32652104
Alignment:
Q  384 ttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatggt 483  Q
    ||||||||||||  ||||||||||||||||  |||||||||||   ||||| |||||||| ||||||||    ||||||||||| |||||| ||||||||    
T  32652204 ttgatggacgtcaaacaaattcaaggactattttgatatttcgttaaattgggggacgaatttggccgaaccctgaaaattcagtgacgaaattgatggt 32652105  T
Q  484 t 484  Q
    |    
T  32652104 t 32652104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 400 - 479
Target Start/End: Original strand, 4173740 - 4173819
Alignment:
Q  400 aaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 479  Q
    ||||||| ||||||| ||||||||||||| |||| ||||||||| ||||||||  | | |||||||| ||||||||||||    
T  4173740 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttga 4173819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 400 - 479
Target Start/End: Complemental strand, 43507256 - 43507177
Alignment:
Q  400 aaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 479  Q
    ||||||| ||||||| ||||||||||||| |||| ||||||||| ||||||||  | | |||||||| ||||||||||||    
T  43507256 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttga 43507177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 400 - 479
Target Start/End: Original strand, 43508653 - 43508732
Alignment:
Q  400 aaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 479  Q
    ||||||| ||||||| ||||||||||||| |||| ||||||||| ||||||||  | | |||||||| ||||||||||||    
T  43508653 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttga 43508732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 355 - 449
Target Start/End: Original strand, 13450970 - 13451064
Alignment:
Q  355 taacagaggacttggacggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggc 449  Q
    |||||||| | ||||| |||| |||  ||||||||||||||||| ||||||||||||||  |||||||||||   ||||| |||||||| |||||    
T  13450970 taacagagcatttggatggagggaccattttgatggacgtctgataaattcaaggactattttgatatttcgttaaattgggggacgaatttggc 13451064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 290 - 416
Target Start/End: Original strand, 26296819 - 26296945
Alignment:
Q  290 acgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaaggctaacagaggacttggacggagtgacatttttgatg 389  Q
    ||||||||||||| | | |||| |||||||||||||   ||||||||||||||| |||  ||  ||||||||  | ||||| ||| ||||  ||||||||    
T  26296819 acgtggcttccttgtagacacgtgtacaagacaacatgacatgcaagacgacagctcatcaacactaacagatcatttggatggaatgactattttgatg 26296918  T
Q  390 gacgtctgacaaattcaaggactaagt 416  Q
    ||||| ||||||||||| |||| ||||    
T  26296919 gacgtttgacaaattcagggacaaagt 26296945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 398 - 480
Target Start/End: Complemental strand, 44556711 - 44556629
Alignment:
Q  398 acaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgat 480  Q
    ||||||||| ||||||| |||||||||| |||||||||||||| || ||| |||||  || ||||||||||||| || |||||    
T  44556711 acaaattcatggactaaattgatatttcacataattgagggactaatttgaccgacccgtaaaaattcagggacaaagttgat 44556629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 384 - 489
Target Start/End: Complemental strand, 5484645 - 5484540
Alignment:
Q  384 ttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatggt 483  Q
    ||||||||||||  ||||||||| ||||||  |||||||||||   ||||  |||||||| |||||||||   | |||||||| ||||||| ||||||||    
T  5484645 ttgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttggggacgaatttggccgacccctaaaaattcatggacgaaattgatggt 5484546  T
Q  484 tcactc 489  Q
    ||||||    
T  5484545 tcactc 5484540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 398 - 447
Target Start/End: Original strand, 39190819 - 39190868
Alignment:
Q  398 acaaattcaaggactaagttgatatttcgcataattgagggacgaagttg 447  Q
    ||||||||| ||| ||| ||||||||||||||||||||||||||||||||    
T  39190819 acaaattcacggattaaattgatatttcgcataattgagggacgaagttg 39190868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 271 - 479
Target Start/End: Complemental strand, 51012143 - 51011936
Alignment:
Q  271 atcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaaggctaacagaggacttgga 370  Q
    ||||| ||||||| |  |||||||||| |||| ||| |||| ||||||||||||||| ||||||||  ||||  |||  |   |||||||||   |||||    
T  51012143 atcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacatcatgcaagg-gacacgtcatcactactaacagagcttttgga 51012045  T
Q  371 cggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcaggga 470  Q
    ||||| |||  ||||||||||||||||  |||||||  |||||| | ||||||||||| |||| | | | ||| ||| ||||  | | |||||||| |||    
T  51012044 cggagggaccattttgatggacgtctgtaaaattcagagactaaatagatatttcgcaaaattcaagaaagaatttgaccgattttttaaaattcaagga 51011945  T
Q  471 cgaatttga 479  Q
    |||||||||    
T  51011944 cgaatttga 51011936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 398 - 489
Target Start/End: Original strand, 5486052 - 5486143
Alignment:
Q  398 acaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatggttcactc 489  Q
    ||||||||| ||||||  |||||||||||   |||| ||||| ||| |||||||||   | |||||||||||||||| ||||||||||||||    
T  5486052 acaaattcagggactattttgatatttcgttaaatttagggatgaatttggccgacccctaaaaattcagggacgaaattgatggttcactc 5486143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 88 - 175
Target Start/End: Complemental strand, 27382527 - 27382440
Alignment:
Q  88 tcgccggagatgatgatgattttggaggggtgaaaatggaggaagttttagcgagaagaagaagggtcaaggacgtttttgatgttct 175  Q
    |||||||||||||||||||||||  |||||||||  ||  | | ||||||||| |||| |||| ||||| ||||||||||| ||||||    
T  27382527 tcgccggagatgatgatgattttaaaggggtgaagttgatgaaggttttagcgggaaggagaaaggtcagggacgtttttgttgttct 27382440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 400 - 479
Target Start/End: Complemental strand, 35401838 - 35401759
Alignment:
Q  400 aaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 479  Q
    ||||||||||||||| | |||||||| || |||| ||||||||| ||||||||  | | |||||||| ||||||||||||    
T  35401838 aaattcaaggactaaatagatatttcacaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttga 35401759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 399 - 452
Target Start/End: Complemental strand, 230526 - 230473
Alignment:
Q  399 caaattcaaggactaagttgatatttcgcataattgagggacgaagttggccga 452  Q
    ||||||||  |||||| |||||||||||||||||||||||||||  ||||||||    
T  230526 caaattcagagactaatttgatatttcgcataattgagggacgattttggccga 230473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 87 - 172
Target Start/End: Complemental strand, 25993910 - 25993825
Alignment:
Q  87 atcgccggagatgatgatgattttggaggggtgaaaatggaggaagttttagcgagaagaagaagggtcaaggacgtttttgatgt 172  Q
    ||||||| |||||||||||||||||||| |||||| |||| | | ||||| ||| |||| |||| ||| | |||||| ||||||||    
T  25993910 atcgccgaagatgatgatgattttggagaggtgaagatggtgaaggttttggcgggaaggagaaaggttagggacgtgtttgatgt 25993825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 366 - 479
Target Start/End: Complemental strand, 49523247 - 49523134
Alignment:
Q  366 ttggacggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattc 465  Q
    |||||||||| |||  |||||||| |||||||  ||||||| ||||||| | ||||||||||| |||| | ||||||| || |||||  | | |||||||    
T  49523247 ttggacggagggaccattttgatgaacgtctgtaaaattcagggactaaatagatatttcgcaaaattcatggacgaatttagccgattttttaaaattc 49523148  T
Q  466 agggacgaatttga 479  Q
    |  |||||||||||    
T  49523147 aatgacgaatttga 49523134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 403 - 479
Target Start/End: Original strand, 320903 - 320979
Alignment:
Q  403 ttcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 479  Q
    |||||||||||| ||||||||||||| |||| | ||| ||| ||||||||  | | |||||||| ||||||||||||    
T  320903 ttcaaggactaatttgatatttcgcaaaattcaaggatgaaattggccgatttttcaaaattcaaggacgaatttga 320979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 271 - 347
Target Start/End: Original strand, 11255846 - 11255922
Alignment:
Q  271 atcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatca 347  Q
    ||||| ||||||| |  |||||||||| |||| ||| |||| |||||||||||||||||||| |||| |||| ||||    
T  11255846 atcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgtaagaggacacatca 11255922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 398 - 466
Target Start/End: Complemental strand, 51040826 - 51040758
Alignment:
Q  398 acaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattca 466  Q
    ||||||||| ||| | | |||||||||||||||||||| ||| ||| |||||||||  |||||||||||    
T  51040826 acaaattcagggattgaattgatatttcgcataattgaaggatgaatttggccgacccgtgaaaattca 51040758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 400 - 479
Target Start/End: Complemental strand, 319362 - 319283
Alignment:
Q  400 aaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 479  Q
    ||||||| | ||||| ||||||||||||| |||| ||||||||| ||| ||||  | | |||||||| ||||||||||||    
T  319362 aaattcaggaactaatttgatatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttga 319283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 400 - 479
Target Start/End: Complemental strand, 39345653 - 39345574
Alignment:
Q  400 aaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 479  Q
    ||||||| ||||||| | | ||||||||| |||| ||||||||| ||||||||  | | |||||||| ||||||||||||    
T  39345653 aaattcagggactaaatagctatttcgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttga 39345574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 271 - 348
Target Start/End: Complemental strand, 11601888 - 11601811
Alignment:
Q  271 atcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcag 348  Q
    ||||||||||||| || |||||||  | |||||||| |||| ||||| ||||||||| || |||||| |||| |||||    
T  11601888 atcaaattagtccttatacacgtgattgccttcttgacacgtgtacatgacaacacaacacgcaagaggacacatcag 11601811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 177
Target Start/End: Complemental strand, 44972759 - 44972714
Alignment:
Q  132 gttttagcgagaagaagaagggtcaaggacgtttttgatgttctga 177  Q
    ||||||||||||||||||| |||||  ||||| |||||||||||||    
T  44972759 gttttagcgagaagaagaaaggtcagagacgtgtttgatgttctga 44972714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 384 - 489
Target Start/End: Original strand, 44994306 - 44994411
Alignment:
Q  384 ttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatggt 483  Q
    ||||||||||||  ||||||||| ||||||  |||||||||||   ||||  |||||||| |||||||||   |||||||| ||||| ||| ||||| ||    
T  44994306 ttgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttggggacgaatttggccgacccctgaaaatttagggatgaaattgatagt 44994405  T
Q  484 tcactc 489  Q
     |||||    
T  44994406 acactc 44994411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 182; Significance: 5e-98; HSPs: 62)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 182; E-Value: 5e-98
Query Start/End: Original strand, 252 - 489
Target Start/End: Original strand, 46996589 - 46996826
Alignment:
Q  252 ctcaacattttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaa 351  Q
    ||||||||||||||||||||||||||| |||| | |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |     
T  46996589 ctcaacattttccaattcaatcaaattcgtccttgaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaaggcgacagatcagcat 46996688  T
Q  352 ggctaacagaggacttggacggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccg 451  Q
     |||||| ||| |||||||||||| ||| ||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||    
T  46996689 cgctaacggagcacttggacggagggacctttttgatggacgtctgacaaattcagtgactaagttgatatttcgcataattgagggacgaagttggccg 46996788  T
Q  452 acgtgtgaaaattcagggacgaatttgatggttcactc 489  Q
    ||| ||||||||||||||||||||||||||||||||||    
T  46996789 acgcgtgaaaattcagggacgaatttgatggttcactc 46996826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 145; E-Value: 6e-76
Query Start/End: Original strand, 18 - 211
Target Start/End: Original strand, 46996354 - 46996547
Alignment:
Q  18 acttgataaacaacaggaaagatgttacctttaatcacaatcgaacacacaaacttcaaaaatgtcagaatcgccggagatgatgatgattttggagggg 117  Q
    ||||||||||||||||||||| |||||||||||||||||  |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  46996354 acttgataaacaacaggaaaggtgttacctttaatcacagccgaacacacaaacttcaaaaatgtcagaatcgtcggagatgatgatgattttggagggg 46996453  T
Q  118 tgaaaatggaggaagttttagcg---agaagaagaagggtcaaggacgtttttgatgttctgaaatgtgaagaaggaggtatgggtaatgcaggggc 211  Q
    |||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||    |||||||||||||||||| ||||||    
T  46996454 tgaaaatggaggaagttttagcgagaagaagaagaagggtcaaggacgtttttgatgttctgaaatgt---aaaggaggtatgggtaatgtaggggc 46996547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 259 - 489
Target Start/End: Original strand, 46812476 - 46812706
Alignment:
Q  259 ttttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaaggctaac 358  Q
    ||||| |||||||||||| |||||| | |||||||||||||||||||||||| ||||||||||||||||||||||| | ||||| ||||| | |||||||    
T  46812476 ttttcaaattcaatcaaagtagtccttgaacacgtggcttccttcttgccacacgtacaagacaacacagcatgcagggcgacatatcagcatggctaac 46812575  T
Q  359 agaggacttggacggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtg 458  Q
    |||| ||||||||||| |||| |||||||||||||||||||||||| | ||||||| |||||||||| | ||||||||||| ||| |||||||||  ||     
T  46812576 agagcacttggacggaatgacctttttgatggacgtctgacaaatttagggactaaattgatatttcacgtaattgagggatgaatttggccgactcgta 46812675  T
Q  459 aaaattcagggacgaatttgatggttcactc 489  Q
    |||||||| ||||||| ||||||||||||||    
T  46812676 aaaattcaaggacgaagttgatggttcactc 46812706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 256 - 489
Target Start/End: Original strand, 33038688 - 33038921
Alignment:
Q  256 acattttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaaggct 355  Q
    |||||||||||||||||||||| ||||| | ||||| |||||||||||||| |||| ||| ||||||||||| |||||| ||||||||||||  | | ||    
T  33038688 acattttccaattcaatcaaatcagtccttgaacacatggcttccttcttgacacgtgtataagacaacacaacatgcaggacgacagatcaacatgcct 33038787  T
Q  356 aacagaggacttggacggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgt 455  Q
    ||||||| |||||||||||| ||| |||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| ||| ||| |||||      
T  33038788 aacagagcacttggacggagggacctttttgatggacgtctgaaaaattcagggactaagttgatatttcgcataattgagggatgaatttgaccgaccc 33038887  T
Q  456 gtgaaaattcagggacgaatttgatggttcactc 489  Q
     | |||||||| |||||||||||||| |||||||    
T  33038888 ataaaaattcaaggacgaatttgatgattcactc 33038921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 123; E-Value: 8e-63
Query Start/End: Original strand, 259 - 489
Target Start/End: Complemental strand, 40784576 - 40784346
Alignment:
Q  259 ttttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaaggctaac 358  Q
    ||||||||||||||||||||||||| | |||| |||||||||||||||||||| ||| ||||||||||| |||||| ||||||||||||| | |  ||||    
T  40784576 ttttccaattcaatcaaattagtccttgaacatgtggcttccttcttgccacgtgtataagacaacacaacatgcaggacgacagatcagcatgattaac 40784477  T
Q  359 agaggacttggacggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtg 458  Q
    || | | |||||||||| ||| ||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| ||| ||| || || |||| ||     
T  40784476 agcgcatttggacggagggacctttttgatggatgtctgacaaattcaaagactaagttgatatttcgcataattgaaggatgaatttagctgacgcgta 40784377  T
Q  459 aaaattcagggacgaatttgatggttcactc 489  Q
    |||||||| | ||||||||||||||||||||    
T  40784376 aaaattcaagaacgaatttgatggttcactc 40784346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 259 - 489
Target Start/End: Original strand, 47341576 - 47341810
Alignment:
Q  259 ttttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaaga----cgacagatcaggaaggc 354  Q
    ||||||||||||||||||||||||| | ||||||||||||||||||||||||| |||||||||||||||||||||| |     |||||  ||   | |||    
T  47341576 ttttccaattcaatcaaattagtccttgaacacgtggcttccttcttgccacgtgtacaagacaacacagcatgcatgcagggcgacatgtccccatggc 47341675  T
Q  355 taacagaggacttggacggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacg 454  Q
    |||| ||| ||||||||||||  || ||||||||  |||||||||||||||| |||||||||||||||||||||||||||||||| ||| |||||||||     
T  47341676 taacggagcacttggacggagatacctttttgattaacgtctgacaaattcagggactaagttgatatttcgcataattgagggatgaatttggccgacc 47341775  T
Q  455 tgtgaaaattcagggacgaatttgatggttcactc 489  Q
     ||||||||||| ||||||||||||||||||||||    
T  47341776 cgtgaaaattcaaggacgaatttgatggttcactc 47341810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 259 - 489
Target Start/End: Original strand, 8423175 - 8423405
Alignment:
Q  259 ttttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaaggctaac 358  Q
    |||||||| ||||||||||| |||||| |||||||||||||||||||||||||||||||||||| ||||||||||||| |||||  |||| | |||||||    
T  8423175 ttttccaaatcaatcaaattcgtccctgaacacgtggcttccttcttgccacgcgtacaagacagcacagcatgcaaggcgacatgtcagcatggctaac 8423274  T
Q  359 agaggacttggacggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtg 458  Q
     |||  | |  |||||| ||| |||||||| ||||||||| ||||||| ||| ||| ||||||||||||||||||||||||| || ||||| |||  |||    
T  8423275 ggagcccgttaacggagggacctttttgattgacgtctgataaattcagggattaaattgatatttcgcataattgagggacaaatttggctgacccgtg 8423374  T
Q  459 aaaattcagggacgaatttgatggttcactc 489  Q
    ||||||||||||| || ||||||||||||||    
T  8423375 aaaattcagggactaaattgatggttcactc 8423405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 271 - 489
Target Start/End: Complemental strand, 23954023 - 23953805
Alignment:
Q  271 atcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaaggctaacagaggacttgga 370  Q
    |||||||||||||   |||||||||||||||| |||||||| ||||||||||||||| |||||| | ||||| ||||| | ||||||| ||| |||||||    
T  23954023 atcaaattagtcctggaacacgtggcttcctttttgccacgtgtacaagacaacacaacatgcatggcgacatatcagcatggctaacggagcacttgga 23953924  T
Q  371 cggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcaggga 470  Q
    ||||| ||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||||| ||||||| ||  |||||  || |||||| | |||    
T  23953923 cggagggacctttttgattgacgtctgacaaattcacggactaagttgatatttcgcataattgatggacgaattttaccgacccgtaaaaatttaagga 23953824  T
Q  471 cgaatttgatggttcactc 489  Q
    |||||||||||||||||||    
T  23953823 cgaatttgatggttcactc 23953805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 259 - 489
Target Start/End: Original strand, 35344184 - 35344414
Alignment:
Q  259 ttttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaaggctaac 358  Q
    |||||||| ||||||||||| |||||| |||||||||||||||||||||||||||||||||||| ||||||||||||| | |||  |||| | |||||||    
T  35344184 ttttccaaatcaatcaaattcgtccctgaacacgtggcttccttcttgccacgcgtacaagacagcacagcatgcaaggcaacatgtcagcatggctaac 35344283  T
Q  359 agaggacttggacggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtg 458  Q
     |||  | |  |||||| ||| |||||||||||||||| | ||||||| ||| ||| |||||||||||||||||||||||||||| ||||| |||  |||    
T  35344284 ggagcccgttaacggagggacctttttgatggacgtcttataaattcagggattaaattgatatttcgcataattgagggacgaatttggctgacccgtg 35344383  T
Q  459 aaaattcagggacgaatttgatggttcactc 489  Q
    ||||||| ||||| || ||||||||||||||    
T  35344384 aaaattcggggactaaattgatggttcactc 35344414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 271 - 489
Target Start/End: Complemental strand, 2167697 - 2167479
Alignment:
Q  271 atcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaaggctaacagaggacttgga 370  Q
    ||||||||||||| | ||| |||||||| ||| |||||||| ||||||||||||||| |||||| |  ||||  |||| | ||||||  ||| |||||||    
T  2167697 atcaaattagtccttgaacgcgtggctttctttttgccacgtgtacaagacaacacatcatgcagggtgacacgtcagcatggctaatggagcacttgga 2167598  T
Q  371 cggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcaggga 470  Q
    ||||| ||| |||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| ||| ||| |||||  ||   |||||| |||    
T  2167597 cggagggacctttttgatgggcgtctgacaaattcagggactaagttgatatttcgcataattgagggatgaatttgaccgacccgtactaattcaagga 2167498  T
Q  471 cgaatttgatggttcactc 489  Q
    |  ||||||||||||||||    
T  2167497 catatttgatggttcactc 2167479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 19 - 211
Target Start/End: Original strand, 46812229 - 46812427
Alignment:
Q  19 cttgataaacaacaggaaagatgttacctttaatca-caatcgaacacacaaacttcaaaaatgtcagaatcgccggagatgatgatgattttggagggg 117  Q
    ||||||||||||||||||||   ||||||||  | | ||  |||||||| |||||||||||| |||||||||| ||||||||||||||||||||||||||    
T  46812229 cttgataaacaacaggaaaggcattaccttttttaaacagccgaacacagaaacttcaaaaacgtcagaatcgtcggagatgatgatgattttggagggg 46812328  T
Q  118 tgaaaatggaggaagttttagcgagaagaagaagggtcaaggacgtttttgatgtt-----ctgaaatgtgaagaaggaggtatgggtaatgcaggggc 211  Q
    ||| ||||||| ||||||||| | |||| |||| |||||||| |||||||||||||     ||||||||||||||| |||||||| |||||||||||||    
T  46812329 tgagaatggagaaagttttagtgggaaggagaaaggtcaaggtcgtttttgatgtttctgactgaaatgtgaagaatgaggtatgagtaatgcaggggc 46812427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 42 - 211
Target Start/End: Original strand, 33038476 - 33038650
Alignment:
Q  42 ttacctttaatcacaatcgaacacacaaacttcaaaaatgtcagaatcgccggagatgatgatgattttggaggggtgaaaatggaggaagttttagcga 141  Q
    ||||||||||||||| | |||| || ||||||||||||  | ||||||||||||||||||||||||||||||||||||  ||||||| |||||||||||     
T  33038476 ttacctttaatcacagttgaacgcataaacttcaaaaacatgagaatcgccggagatgatgatgattttggaggggtgggaatggagaaagttttagcgg 33038575  T
Q  142 gaagaagaagggtcaaggacgtttttgatgtt-----ctgaaatgtgaagaaggaggtatgggtaatgcaggggc 211  Q
    ||||  ||||||| || |||||||||||||||      |||||||||||||||||||||||  ||||||||||||    
T  33038576 gaaggggaagggttaatgacgtttttgatgtttctgagtgaaatgtgaagaaggaggtatgtataatgcaggggc 33038650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 11 - 211
Target Start/End: Complemental strand, 40784831 - 40784626
Alignment:
Q  11 cacagatacttgataaacaacaggaaagatgttacctttaatcacaatcgaacacacaaacttcaaaaatgtcagaatcgccggagatgatgatgatttt 110  Q
    |||||| | ||||||||| |||| |||   ||||||||||| ||||| |||||||| |||||||||| | || |||||||||  ||||| ||||||||||    
T  40784831 cacagaaatttgataaactacagaaaatgcgttacctttaaccacaaccgaacacaaaaacttcaaacacgtgagaatcgccaaagatggtgatgatttt 40784732  T
Q  111 ggaggggtgaaaatggaggaagttttagcgagaagaagaagggtcaaggacgtttttgatgtt-----ctgaaatgtgaagaaggaggtatgggtaatgc 205  Q
    |||||||||| ||||||| ||||||||||| |||| ||||||||||| ||  ||||| |||||      ||||||||||||||||||||||| |||||||    
T  40784731 ggaggggtgagaatggagaaagttttagcgggaaggagaagggtcaatgatattttttatgtttctaagtgaaatgtgaagaaggaggtatgagtaatgc 40784632  T
Q  206 aggggc 211  Q
    ||||||    
T  40784631 aggggc 40784626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 377 - 489
Target Start/End: Original strand, 38613493 - 38613605
Alignment:
Q  377 gacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatt 476  Q
    ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| |||||||||  ||||||||| | |||||||||    
T  38613493 gacattttttatggacgtctgacaaattcagggactaagttgatatttcgcataattgagggatgaatttggccgacccgtgaaaattgaaggacgaatt 38613592  T
Q  477 tgatggttcactc 489  Q
    |||||||||||||    
T  38613593 tgatggttcactc 38613605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 338 - 489
Target Start/End: Original strand, 38614885 - 38615035
Alignment:
Q  338 cgacagatcaggaaggctaacagaggacttggacggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagg 437  Q
    ||||||||||| | ||||||||||| |||| ||||||| ||||||||| |||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  38614885 cgacagatcagcatggctaacagagcacttagacggagggacattttt-atggacgtctgacaaattcagggactaagttaatatttcgcataattgagg 38614983  T
Q  438 gacgaagttggccgacgtgtgaaaattcagggacgaatttgatggttcactc 489  Q
    || ||| |||  ||||  ||||||||| | |||||||||||||| |||||||    
T  38614984 gatgaatttgatcgacccgtgaaaatttaaggacgaatttgatgtttcactc 38615035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 271 - 489
Target Start/End: Complemental strand, 27955588 - 27955370
Alignment:
Q  271 atcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaaggctaacagaggacttgga 370  Q
    |||||||| |||| | ||||| |||||||||| |||||| | ||||||||||||||| ||||||  |||||| ||||| | | ||||| ||| |||||||    
T  27955588 atcaaattggtccttgaacacatggcttccttgttgccaagtgtacaagacaacacaacatgcagcacgacacatcagcatgactaacggagcacttgga 27955489  T
Q  371 cggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcaggga 470  Q
    ||||| ||| | ||||||||||||||||||||||||   | ||||||||||||||| | |||||||||| ||| || || ||   || |||||||| |||    
T  27955488 cggagggacctctttgatggacgtctgacaaattcagaaattaagttgatatttcgtaaaattgagggatgaatttagctgatccgtaaaaattcaagga 27955389  T
Q  471 cgaatttgatggttcactc 489  Q
    ||||||||||| |||||||    
T  27955388 cgaatttgatgattcactc 27955370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 19 - 211
Target Start/End: Original strand, 47341340 - 47341534
Alignment:
Q  19 cttgataaacaacaggaaagatgttacctttaatcacaatcgaacacacaaacttcaaaaatgtcagaatcgccggagatgatgatgattttggaggggt 118  Q
    |||| ||||||||  |||||  ||||||||||||||||  |||||||| |||| |||||||  ||||||||| |||   |||||||||||||||||||||    
T  47341340 cttggtaaacaacttgaaaggcgttacctttaatcacagccgaacacagaaacgtcaaaaacttcagaatcgtcgg---tgatgatgattttggaggggt 47341436  T
Q  119 gaaaatggaggaagttttagcgagaagaagaagggtcaaggacgtttttgatgtt-----ctgaaatgtgaagaaggaggtatgggtaatgcaggggc 211  Q
    || |||| || |||||||||||  |||  |||  |||||||| ||||||||||||     ||||||||||||||||||||||||||||||||||||||    
T  47341437 gagaatgaagaaagttttagcggaaaggtgaaatgtcaaggatgtttttgatgtttctcactgaaatgtgaagaaggaggtatgggtaatgcaggggc 47341534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 11 - 211
Target Start/End: Complemental strand, 23954290 - 23954085
Alignment:
Q  11 cacagatacttgataaacaacaggaaagatgttacctttaatcacaatcgaacacacaaacttcaaaaatgtcagaatcgccggagatgatgatgatttt 110  Q
    |||||| ||||||| ||| | ||||||| || ||||||||| ||||  ||||| || |||||||||||| || ||||||||  |||||||||||||||||    
T  23954290 cacagaaacttgattaactataggaaaggtgctacctttaaccacagccgaactcagaaacttcaaaaacgtgagaatcgcgagagatgatgatgatttt 23954191  T
Q  111 ggaggggtgaaaatggaggaagttttagcgagaagaagaagggtcaaggacgtttttgatgtt-----ctgaaatgtgaagaaggaggtatgggtaatgc 205  Q
    |||| ||||| ||||||| ||||||||||  | || ||||| ||||||||||||||| |||||       ||||||||| |||||||||||||||||| |    
T  23954190 ggagaggtgagaatggagaaagttttagcaggtaggagaagagtcaaggacgttttttatgtttatgaaagaaatgtgaggaaggaggtatgggtaatac 23954091  T
Q  206 aggggc 211  Q
    ||||||    
T  23954090 aggggc 23954085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 84 - 211
Target Start/End: Complemental strand, 2167885 - 2167753
Alignment:
Q  84 agaatcgccggagatgatgatgattttggaggggtgaaaatggaggaagttttagcgagaagaagaagggtcaaggacgtttttgatgtt-----ctgaa 178  Q
    ||||||||||||||||| ||||||||||||| ||||| ||||||| ||||||||||| |||| ||||||||||| |||||||||||||||      ||||    
T  2167885 agaatcgccggagatgaagatgattttggagaggtgagaatggagaaagttttagcgggaaggagaagggtcaaagacgtttttgatgtttctgattgaa 2167786  T
Q  179 atgtgaagaaggaggtatgggtaatgcaggggc 211  Q
    |||||| |||||||||||||||||| |||||||    
T  2167785 atgtgaggaaggaggtatgggtaatacaggggc 2167753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 271 - 489
Target Start/End: Complemental strand, 2492544 - 2492327
Alignment:
Q  271 atcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaaggctaacagaggacttgga 370  Q
    ||||||||||||| | |||||||| ||||||| |||||||| |||||||||| || ||||||   | ||| ||||||  | ||||||| ||| ||||| |    
T  2492544 atcaaattagtccttgaacacgtgacttcctttttgccacgtgtacaagacagcagagcatgttgggcgatagatcaacatggctaacggagcacttgaa 2492445  T
Q  371 cggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcaggga 470  Q
    |||||  || ||||| |||||||| ||| ||||||||| | |||||||||||||||||||||||| |||  |  ||| |||||  || |||||||  |||    
T  2492444 cggaggaactttttt-atggacgtttgaaaaattcaagtattaagttgatatttcgcataattgaaggataattttgaccgacccgtaaaaattcgagga 2492346  T
Q  471 cgaatttgatggttcactc 489  Q
    |||||||||||||| ||||    
T  2492345 cgaatttgatggtttactc 2492327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 398 - 489
Target Start/End: Complemental strand, 4321129 - 4321038
Alignment:
Q  398 acaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatggttcactc 489  Q
    ||||||||| ||| ||| |||||||||||||||||| |||||||||||||||||||  ||||||||||||||||||| |||||| |||||||    
T  4321129 acaaattcagggattaaattgatatttcgcataattaagggacgaagttggccgacccgtgaaaattcagggacgaagttgatgattcactc 4321038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 398 - 489
Target Start/End: Complemental strand, 30108656 - 30108565
Alignment:
Q  398 acaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatggttcactc 489  Q
    ||||||||| ||| ||| ||||||||||||||||||||||||||||||||||||||  || |||||||||||||||| |||||| |||||||    
T  30108656 acaaattcagggattaaattgatatttcgcataattgagggacgaagttggccgacccgtaaaaattcagggacgaagttgatgattcactc 30108565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 398 - 489
Target Start/End: Complemental strand, 46994751 - 46994660
Alignment:
Q  398 acaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatggttcactc 489  Q
    ||||||||| ||| ||| |||||||||||||||||||| |||||||||||||||||  ||||||||||||||||||| |||||| |||||||    
T  46994751 acaaattcagggattaaattgatatttcgcataattgaaggacgaagttggccgacccgtgaaaattcagggacgaagttgatgattcactc 46994660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 271 - 479
Target Start/End: Original strand, 39859135 - 39859343
Alignment:
Q  271 atcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaaggctaacagaggacttgga 370  Q
    ||||||||||||| |  ||||||||||  ||| ||| |||| ||||| ||||||||||||||||||| ||||  |||  |   ||||| |||   |||||    
T  39859135 atcaaattagtccttgtacacgtggctgtcttgttgacacgtgtacatgacaacacagcatgcaagaggacacgtcatcaccactaacggagcttttgga 39859234  T
Q  371 cggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcaggga 470  Q
    ||||| |||  |||||| |||||||||  ||||||||||||||| | ||||||||||| |||| |||||| || ||||||||  | | |||||||| |||    
T  39859235 cggagggaccattttgacggacgtctgtaaaattcaaggactaaatagatatttcgcaaaattcagggactaatttggccgattttttaaaattcaagga 39859334  T
Q  471 cgaatttga 479  Q
    |||||||||    
T  39859335 cgaatttga 39859343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 398 - 488
Target Start/End: Complemental strand, 3690241 - 3690151
Alignment:
Q  398 acaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatggttcact 488  Q
    ||||||||||||| ||| |||||||||||||||||||||| ||||||||||||||  ||| |||||||| ||||||| |||||| ||||||    
T  3690241 acaaattcaaggattaaattgatatttcgcataattgaggaacgaagttggccgaactgtaaaaattcaaggacgaagttgatgattcact 3690151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 93 - 211
Target Start/End: Original strand, 8423002 - 8423125
Alignment:
Q  93 ggagatgatgatgattttggaggggtgaaaatggaggaagttttagcgagaagaagaagggtcaaggacgtttttgatgtt-ctga----aatgtgaaga 187  Q
    |||||||||||||||||||||||| ||| ||||||| | ||||||||| |||| ||||| |||||||| |||||||||||| ||||    ||||||||||    
T  8423002 ggagatgatgatgattttggagggatgacaatggagaacgttttagcgggaaggagaagagtcaaggatgtttttgatgtttctgagtaaaatgtgaaga 8423101  T
Q  188 aggaggtatgggtaatgcaggggc 211  Q
    |||||| ||  |||||||||||||    
T  8423102 aggaggaatatgtaatgcaggggc 8423125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 93 - 211
Target Start/End: Original strand, 35344011 - 35344134
Alignment:
Q  93 ggagatgatgatgattttggaggggtgaaaatggaggaagttttagcgagaagaagaagggtcaaggacgtttttgatgtt-ctga----aatgtgaaga 187  Q
    |||||||||||||||||||||||||||| ||||||| | ||||||||| |||| ||||| || ||||| |||||||||||| ||||    ||||||||||    
T  35344011 ggagatgatgatgattttggaggggtgacaatggagaacgttttagcgggaaggagaagagttaaggatgtttttgatgtttctgagtaaaatgtgaaga 35344110  T
Q  188 aggaggtatgggtaatgcaggggc 211  Q
    |||||| ||  |||||||||||||    
T  35344111 aggaggaatatgtaatgcaggggc 35344134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 40 - 203
Target Start/End: Complemental strand, 27955824 - 27955657
Alignment:
Q  40 tgttacctttaatcacaatcgaacacacaaacttcaaaaatgtcagaatcgccggagatgatgatgattttggaggggtgaaaatggaggaagttttagc 139  Q
    |||||||||| | ||||  ||||||||  ||||| ||||||   || |||| ||||||||||||||||||||||| ||||| ||||| | | |||| |||    
T  27955824 tgttaccttttaccacagacgaacacaacaacttaaaaaattagaggatcgtcggagatgatgatgattttggagaggtgagaatgg-gaaggtttaagc 27955726  T
Q  140 gagaagaagaagggtcaaggacgtttttgatgtt-----ctgaaatgtgaagaaggaggtatgggtaat 203  Q
    | |||| ||||||||||||||||||||| |||||     |||||| |||| ||||||||||||||||||    
T  27955725 gggaagcagaagggtcaaggacgtttttaatgtttctgactgaaaagtgaggaaggaggtatgggtaat 27955657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 84 - 211
Target Start/End: Complemental strand, 38613876 - 38613744
Alignment:
Q  84 agaatcgccggagatgatgatgattttggaggggtgaaaatggaggaagttttagcgagaagaagaagggtcaaggacgtttttgatgtt-----ctgaa 178  Q
    |||||| | |||||||||||||||||||||| ||||| ||| ||| ||||||||||| |||| ||||||||||| ||| |||||||||||      ||||    
T  38613876 agaatcactggagatgatgatgattttggagaggtgagaatagagaaagttttagcgggaaggagaagggtcaatgacatttttgatgtttctgagtgaa 38613777  T
Q  179 atgtgaagaaggaggtatgggtaatgcaggggc 211  Q
    |||||| ||| ||||||||| |||| |||||||    
T  38613776 atgtgaggaatgaggtatggataatacaggggc 38613744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 398 - 489
Target Start/End: Complemental strand, 8421507 - 8421416
Alignment:
Q  398 acaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatggttcactc 489  Q
    ||||||||| ||| ||| |||||||||||||||||||||||||||| |||||||||  |||| ||||||||||| || |||||| |||||||    
T  8421507 acaaattcagggattaaattgatatttcgcataattgagggacgaatttggccgacccgtgataattcagggactaagttgatgattcactc 8421416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 288 - 479
Target Start/End: Original strand, 37796104 - 37796295
Alignment:
Q  288 acacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaaggctaacagaggacttggacggagtgacatttttga 387  Q
    |||||||||| |||||||| |||| ||| ||||||||||| ||||||||| |||| ||||| |  |||||| |||    ||||||||| |||  ||||||    
T  37796104 acacgtggctgccttcttgacacgtgtagaagacaacacaacatgcaagaggacacatcagcatcgctaacggagcttatggacggagggactattttga 37796203  T
Q  388 tggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 479  Q
    |||||||| |  ||||||| ||||||| | ||||||||||| ||||   ||||||| ||||| ||  | |||||||||| |||| |||||||    
T  37796204 tggacgtccgtaaaattcagggactaaatagatatttcgcaaaatttgaggacgaatttggctgatttttgaaaattcaaggacaaatttga 37796295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 398 - 489
Target Start/End: Original strand, 45465184 - 45465275
Alignment:
Q  398 acaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatggttcactc 489  Q
    ||||||||| ||| ||| |||||||||||||||||||||||||||||||| |||||  || |||||||| ||||||| |||||| |||||||    
T  45465184 acaaattcagggattaaattgatatttcgcataattgagggacgaagttgaccgacccgtaaaaattcaaggacgaagttgatgattcactc 45465275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 384 - 489
Target Start/End: Complemental strand, 45463775 - 45463670
Alignment:
Q  384 ttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatggt 483  Q
    ||||||||||||  ||||||||| ||||||  |||||||||||   |||| ||||||||| |||||||||   |||||||||||||||||| ||||||||    
T  45463775 ttgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttagggacgaatttggccgacccctgaaaattcagggacgaaattgatggt 45463676  T
Q  484 tcactc 489  Q
    ||||||    
T  45463675 tcactc 45463670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 398 - 487
Target Start/End: Complemental strand, 46810796 - 46810707
Alignment:
Q  398 acaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatggttcac 487  Q
    ||||||||| ||| ||| ||||||||||||||||||||||||| || ||||||||   ||||||||||||||||||| |||||| |||||    
T  46810796 acaaattcagggattaaattgatatttcgcataattgagggactaatttggccgatccgtgaaaattcagggacgaagttgatgattcac 46810707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 366 - 479
Target Start/End: Original strand, 27666066 - 27666179
Alignment:
Q  366 ttggacggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattc 465  Q
    |||||||||| |||   |||||||||||| ||  ||||||| ||||||| ||||||||||||| |||| ||||||||| ||||||||  | | |||||||    
T  27666066 ttggacggagggacggatttgatggacgtttgtaaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattc 27666165  T
Q  466 agggacgaatttga 479  Q
    | ||||||||||||    
T  27666166 aaggacgaatttga 27666179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 400 - 489
Target Start/End: Complemental strand, 33775497 - 33775408
Alignment:
Q  400 aaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatggttcactc 489  Q
    ||||||| ||| ||| |||||||||||||||||||| ||||||||||| |||||  || |||||||||||||||| |||| | |||||||    
T  33775497 aaattcagggattaaattgatatttcgcataattgaaggacgaagttgaccgacccgtaaaaattcagggacgaagttgacgattcactc 33775408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 384 - 479
Target Start/End: Complemental strand, 56435 - 56340
Alignment:
Q  384 ttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 479  Q
    ||||||||||||||  ||||||| ||||||| ||||||||||||| |||| ||||||||| || |||||  | | |||||||| ||||||||||||    
T  56435 ttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttga 56340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 398 - 489
Target Start/End: Complemental strand, 35342516 - 35342425
Alignment:
Q  398 acaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatggttcactc 489  Q
    ||||||||| ||| ||| ||||||||||||||||||||||||| || |||||||||  || | ||||||||||| || |||||| |||||||    
T  35342516 acaaattcagggattaaattgatatttcgcataattgagggacaaatttggccgacccgtaataattcagggactaagttgatgattcactc 35342425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 398 - 481
Target Start/End: Complemental strand, 47339867 - 47339784
Alignment:
Q  398 acaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatg 481  Q
    |||||||||| || ||| |||||||||||||| |||||| ||||||||||||||||  ||  ||||||||||||||| ||||||    
T  47339867 acaaattcaaagattaaattgatatttcgcatcattgagagacgaagttggccgacccgtagaaattcagggacgaagttgatg 47339784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 384 - 442
Target Start/End: Complemental strand, 11682886 - 11682828
Alignment:
Q  384 ttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacga 442  Q
    ||||||||||||| || |||||||||||||| ||||||||| |||||||||||||||||    
T  11682886 ttgatggacgtctaacgaattcaaggactaatttgatattttgcataattgagggacga 11682828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 271 - 439
Target Start/End: Complemental strand, 6602553 - 6602385
Alignment:
Q  271 atcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaaggctaacagaggacttgga 370  Q
    ||||||||||||| |  |||||||||| |||  ||| |||| ||||| ||||||||||||||||| | ||||  |||  |   ||||| |||   |||||    
T  6602553 atcaaattagtccttgtacacgtggctgcctggttgacacgtgtacatgacaacacagcatgcaaaaggacatgtcatcaccactaacggagcttttgga 6602454  T
Q  371 cggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgaggga 439  Q
    ||||| |||  ||||||||||||||||  ||||||| ||||||| | ||||||||||| |||| |||||    
T  6602453 cggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcaggga 6602385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 400 - 479
Target Start/End: Original strand, 35403619 - 35403698
Alignment:
Q  400 aaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 479  Q
    ||||||| ||||||| ||||||||||||| |||| ||||||||| ||||||||  | | |||||||| ||||||||||||    
T  35403619 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgattttttaaaattcaaggacgaatttga 35403698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 398 - 489
Target Start/End: Original strand, 38614792 - 38614883
Alignment:
Q  398 acaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatggttcactc 489  Q
    ||||| ||||||||||||||||||||| |||||||||||||| ||| ||| |||||   | |||||||| ||||| | |||||| |||||||    
T  38614792 acaaactcaaggactaagttgatattttgcataattgagggatgaatttgaccgacccataaaaattcaaggacgtagttgatgattcactc 38614883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 398 - 489
Target Start/End: Original strand, 40785548 - 40785639
Alignment:
Q  398 acaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatggttcactc 489  Q
    ||||||||| ||| ||  |||||||||| |||||||||| || ||| |||||||||  ||||||||||| ||||||| |||||| |||||||    
T  40785548 acaaattcagggattagattgatatttcacataattgagagatgaatttggccgacccgtgaaaattcaaggacgaaattgatgattcactc 40785639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 271 - 433
Target Start/End: Complemental strand, 45359554 - 45359392
Alignment:
Q  271 atcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaaggctaacagaggacttgga 370  Q
    ||||||||||||| |  ||||||| || |||| |||  ||| ||||| ||||||||||||||||||| ||||  |||  |   ||||| |||   |||||    
T  45359554 atcaaattagtccttgtacacgtgactgcctttttgaaacgtgtacatgacaacacagcatgcaagaggacacgtcatcaccactaacggagcttttgga 45359455  T
Q  371 cggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataatt 433  Q
     |||| |||  ||||||||||||||||  ||||||||||||||| | ||||||||||| ||||    
T  45359454 tggagggaccattttgatggacgtctgtaaaattcaaggactaaatagatatttcgcaaaatt 45359392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 383 - 479
Target Start/End: Original strand, 29996532 - 29996628
Alignment:
Q  383 tttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 479  Q
    |||||||||||||||  ||||||| ||| ||| ||||||||||||| |||| |||||| || ||| ||||  | | |||||||| ||||||||||||    
T  29996532 tttgatggacgtctgtaaaattcagggattaatttgatatttcgcaaaattcagggacaaaattgaccgatttttcaaaattcaaggacgaatttga 29996628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 288 - 452
Target Start/End: Original strand, 38474066 - 38474230
Alignment:
Q  288 acacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaaggctaacagaggacttggacggagtgacatttttga 387  Q
    ||||||||||  ||| ||| |||| ||||| ||||||||||||| ||||| |||| ||||  |   ||||| |||   |||||||||  |||  ||||||    
T  38474066 acacgtggctgtcttgttgacacgtgtacaggacaacacagcatacaagaggacacatcatcaccactaacggagcttttggacggatggaccattttga 38474165  T
Q  388 tggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccga 452  Q
    | | ||||||  ||||||||||||||| | ||||||||||| |||| ||||||||| ||| ||||    
T  38474166 taggcgtctgtaaaattcaaggactaaatagatatttcgcaaaattcagggacgaatttgaccga 38474230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 398 - 489
Target Start/End: Original strand, 2168834 - 2168925
Alignment:
Q  398 acaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatggttcactc 489  Q
    ||||||||||||||||| |||||||||  | ||||| ||||| ||| |||| ||||  || |||||||| ||||||| |||||| |||||||    
T  2168834 acaaattcaaggactaaattgatatttttcttaattaagggatgaatttggacgaccagtaaaaattcaaggacgaagttgatgattcactc 2168925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 400 - 479
Target Start/End: Original strand, 13169683 - 13169762
Alignment:
Q  400 aaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 479  Q
    ||||||| ||||||| | ||||||||||| |||| |||||| || ||||||||  | |||||||||| ||||||||||||    
T  13169683 aaattcagggactaaatagatatttcgcaaaattcagggacaaatttggccgatttttgaaaattcaaggacgaatttga 13169762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 400 - 479
Target Start/End: Complemental strand, 35402058 - 35401979
Alignment:
Q  400 aaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 479  Q
    ||||||| ||||||| ||||||||||||| |||| ||||||||| || |||||  | | |||||||| ||||||||||||    
T  35402058 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattagccgatttttcaaaattcaaggacgaatttga 35401979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 398 - 481
Target Start/End: Original strand, 36762680 - 36762763
Alignment:
Q  398 acaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatg 481  Q
    ||||||||| ||  ||| |||||||||| |||||||||||||| || ||||||||   || |||||||||||||||| ||||||    
T  36762680 acaaattcaggggttaaattgatatttcacataattgagggactaatttggccgatccgtaaaaattcagggacgaagttgatg 36762763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 366 - 452
Target Start/End: Complemental strand, 20478165 - 20478079
Alignment:
Q  366 ttggacggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccga 452  Q
    |||||||||| |||   |||||||||||||||  ||||||| ||||||| ||||||||||| | |||| ||| ||||| ||||||||    
T  20478165 ttggacggagggactgatttgatggacgtctgcaaaattcagggactaatttgatatttcgaaaaattcaggtacgaaattggccga 20478079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 288 - 450
Target Start/End: Original strand, 24228332 - 24228494
Alignment:
Q  288 acacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaaggctaacagaggacttggacggagtgacatttttga 387  Q
    |||||||||| |||| ||| |||| ||| | ||||||||| ||||||||| |||| ||||  |   ||||  |||   ||||||| || |||  ||||||    
T  24228332 acacgtggctgccttgttgacacgtgtatatgacaacacaacatgcaagaggacacatcatcaccactaatggagcttttggacgaagggaccattttga 24228431  T
Q  388 tggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggcc 450  Q
    ||||||||||  |||||||  |||||| | ||||||||||| |||| ||||||||| ||||||    
T  24228432 tggacgtctgtaaaattcagagactaaatagatatttcgcaaaattcagggacgaatttggcc 24228494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 87 - 172
Target Start/End: Complemental strand, 48704579 - 48704494
Alignment:
Q  87 atcgccggagatgatgatgattttggaggggtgaaaatggaggaagttttagcgagaagaagaagggtcaaggacgtttttgatgt 172  Q
    ||||||| |||||||||||||||||||| || ||| |||| | | ||||||||| |||| |||| || ||| ||||| ||||||||    
T  48704579 atcgccgaagatgatgatgattttggagaggcgaagatggtgaaggttttagcgggaagtagaaaggccaaagacgtgtttgatgt 48704494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 416 - 488
Target Start/End: Original strand, 30109717 - 30109789
Alignment:
Q  416 ttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatggttcact 488  Q
    |||||||||||   ||||  |||||||| |||||||||   |||||||||||||||||| |||||||||||||    
T  30109717 ttgatatttcgttaaatttggggacgaatttggccgacccctgaaaattcagggacgaaattgatggttcact 30109789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 366 - 450
Target Start/End: Original strand, 34776916 - 34777000
Alignment:
Q  366 ttggacggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggcc 450  Q
    |||||||||| |||  ||||||||||||||||  ||||||| ||||||| | ||||||||||| |||| ||| | ||| ||||||    
T  34776916 ttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcaggaatgaatttggcc 34777000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 400 - 479
Target Start/End: Complemental strand, 24226670 - 24226591
Alignment:
Q  400 aaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 479  Q
    |||||||||||| || | | ||||||||| |||| | ||||||| ||||||||  | |||||||||| ||||||||||||    
T  24226670 aaattcaaggacaaaatagctatttcgcaaaattcaaggacgaatttggccgatttttgaaaattcaaggacgaatttga 24226591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 271 - 334
Target Start/End: Complemental strand, 38613681 - 38613618
Alignment:
Q  271 atcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgca 334  Q
    ||||| ||||||| | |||||||||||| ||| || ||||| ||||||||||||||| ||||||    
T  38613681 atcaagttagtccttgaacacgtggctttctttttcccacgtgtacaagacaacacaccatgca 38613618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 398 - 488
Target Start/End: Original strand, 36756883 - 36756973
Alignment:
Q  398 acaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatggttcact 488  Q
    |||||||||  || ||| |||||||||| |||||||||||||| || ||| ||||    |||||||||||| ||||| |||||| ||||||    
T  36756883 acaaattcagcgattaaattgatatttcacataattgagggactaatttgaccgatccatgaaaattcaggaacgaagttgatgattcact 36756973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 398 - 488
Target Start/End: Original strand, 36766407 - 36766497
Alignment:
Q  398 acaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatggttcact 488  Q
    |||||||||  || ||| |||||||||| |||||||||||||| || ||| ||||    |||||||||||| ||||| |||||| ||||||    
T  36766407 acaaattcagcgattaaattgatatttcacataattgagggactaatttgaccgatccatgaaaattcaggaacgaagttgatgattcact 36766497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 384 - 489
Target Start/End: Original strand, 4322591 - 4322696
Alignment:
Q  384 ttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatggt 483  Q
    |||||||| |||  ||||||||| ||||||  |||||||||||   ||||| |||||||  ||||||||    |||| ||||||||||||| ||||||||    
T  4322591 ttgatggatgtcaaacaaattcagggactattttgatatttcgttaaattgggggacgagtttggccgatccctgaatattcagggacgaaattgatggt 4322690  T
Q  484 tcactc 489  Q
    | ||||    
T  4322691 ttactc 4322696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 416 - 481
Target Start/End: Complemental strand, 33037766 - 33037701
Alignment:
Q  416 ttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatg 481  Q
    |||||||||| ||||||||||||| ||| |||||||||   | |||||||| ||||||| ||||||    
T  33037766 ttgatatttcacataattgagggatgaatttggccgacacataaaaattcaaggacgaacttgatg 33037701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 178; Significance: 1e-95; HSPs: 62)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 178; E-Value: 1e-95
Query Start/End: Original strand, 252 - 489
Target Start/End: Original strand, 36895397 - 36895634
Alignment:
Q  252 ctcaacattttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaa 351  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |     
T  36895397 ctcaacattttccaattcaatcaaattcgtccctgaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaagacgacagatcagcat 36895496  T
Q  352 ggctaacagaggacttggacggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccg 451  Q
    ||||||| ||| ||||||||| || ||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| |||    
T  36895497 ggctaacggagcacttggacgaagggacctttttgatggacgtctgacaaattcagggactaagttgatatttcgcataattgatggacgaagttgaccg 36895596  T
Q  452 acgtgtgaaaattcagggacgaatttgatggttcactc 489  Q
    ||| |||||||||||||||| |||||||||||||||||    
T  36895597 acgcgtgaaaattcagggacaaatttgatggttcactc 36895634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 178; E-Value: 1e-95
Query Start/End: Original strand, 252 - 489
Target Start/End: Original strand, 46638694 - 46638931
Alignment:
Q  252 ctcaacattttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaa 351  Q
    ||||||||||||||||||||||||||| |||||| |||||||||||||||| |||||||||||||||||||||||| |||||||| ||||||||||| |     
T  46638694 ctcaacattttccaattcaatcaaattcgtccctgaacacgtggcttcctttttgccacgcgtacaagacaacacaacatgcaaggcgacagatcagcat 46638793  T
Q  352 ggctaacagaggacttggacggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccg 451  Q
    ||||||| ||| |||||||||||| ||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  46638794 ggctaacggagcacttggacggagggacctttttggtggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggatgaagttggccg 46638893  T
Q  452 acgtgtgaaaattcagggacgaatttgatggttcactc 489  Q
    ||| ||||||||||||| ||||||||||||||||||||    
T  46638894 acgcgtgaaaattcaggaacgaatttgatggttcactc 46638931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 170; E-Value: 7e-91
Query Start/End: Original strand, 252 - 489
Target Start/End: Complemental strand, 31801870 - 31801633
Alignment:
Q  252 ctcaacattttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaa 351  Q
    ||||||||||||||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||||||||| |||||||||||||| ||||| |     
T  31801870 ctcaacattttccaattcaatcaaattcgtccctgaacacgtgacttccttcttgccacgcgtacaagacaacacaacatgcaagacgacaaatcagcat 31801771  T
Q  352 ggctaacagaggacttggacggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccg 451  Q
    ||||||| ||| |||||||||||| ||| |||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| |||    
T  31801770 ggctaacggagcacttggacggagggacctttttgatggacgtctcacaaatttaaggactaagttgatatttcgcataattgagggacgaagttgaccg 31801671  T
Q  452 acgtgtgaaaattcagggacgaatttgatggttcactc 489  Q
    ||||||||||||| ||||||||||||||| ||| ||||    
T  31801670 acgtgtgaaaatttagggacgaatttgattgtttactc 31801633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 162; E-Value: 4e-86
Query Start/End: Original strand, 18 - 207
Target Start/End: Complemental strand, 31802105 - 31801916
Alignment:
Q  18 acttgataaacaacaggaaagatgttacctttaatcacaatcgaacacacaaacttcaaaaatgtcagaatcgccggagatgatgatgattttggagggg 117  Q
    ||||||||||||||||||||| |||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  31802105 acttgataaacaacaggaaaggtgttacctttaatcacagccgaacacacaaacttcaaaaatgtcagaatcgccggagatgatgatgattttggaggag 31802006  T
Q  118 tgaaaatggaggaagttttagcgagaagaagaagggtcaaggacgtttttgatgttctgaaatgtgaagaaggaggtatgggtaatgcag 207  Q
    ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  31802005 tgaaagtggaggaagttttagcgagaagaagaagggtcaatgacgtttttgatgttctgaaatgtgaagaagtaggtatgggtaatgcag 31801916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 153; E-Value: 1e-80
Query Start/End: Original strand, 18 - 210
Target Start/End: Original strand, 46638459 - 46638651
Alignment:
Q  18 acttgataaacaacaggaaagatgttacctttaatcacaatcgaacacacaaacttcaaaaatgtcagaatcgccggagatgatgatgattttggagggg 117  Q
    ||||||||||||||||||||  |||||||||||||||||  |||||||||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  46638459 acttgataaacaacaggaaatgtgttacctttaatcacagccgaacacacaaacttcaaaaatgtcagaatcgtcgaagatgatgatgattttggagggg 46638558  T
Q  118 tgaaaatggaggaagttttagcgagaagaagaagggtcaaggacgtttttgatgttctgaaatgtgaagaaggaggtatgggtaatgcagggg 210  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| |||||||||||    
T  46638559 tgaaaatggaggaagttttagcgaaaagaagaagggtcaaagacgtttttgatgttctgaaatgtgaagaaggagttatggataatgcagggg 46638651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 146; E-Value: 2e-76
Query Start/End: Original strand, 18 - 211
Target Start/End: Original strand, 36895163 - 36895356
Alignment:
Q  18 acttgataaacaacaggaaagatgttacctttaatcacaatcgaacacacaaacttcaaaaatgtcagaatcgccggagatgatgatgattttggagggg 117  Q
    ||||||||||||||||||||| || ||||||||||||||  |||||| ||||||||||||| ||||||||||| |||||||||||||||||||||||||     
T  36895163 acttgataaacaacaggaaaggtgctacctttaatcacagccgaacaaacaaacttcaaaactgtcagaatcgtcggagatgatgatgattttggaggga 36895262  T
Q  118 tgaaaatggaggaagttttagcgagaagaagaagggtcaaggacgtttttgatgttctgaaatgtgaagaaggaggtatgggtaatgcaggggc 211  Q
    |||||||||||| |||||||||||||||||||||| |||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  36895263 tgaaaatggaggtagttttagcgagaagaagaaggatcaatgacgtttttgatgttgtgaaatgtgaagaaggaggtatgggtaatgcaggggc 36895356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 135; E-Value: 6e-70
Query Start/End: Original strand, 259 - 489
Target Start/End: Complemental strand, 42134712 - 42134482
Alignment:
Q  259 ttttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaaggctaac 358  Q
    ||||||||||||||||||||||||| | |||| |||||||||||||||||||| |||||||||||||||||||||| |  ||||  |||  | |||||||    
T  42134712 ttttccaattcaatcaaattagtccttgaacatgtggcttccttcttgccacgtgtacaagacaacacagcatgcagggtgacatgtcaacatggctaac 42134613  T
Q  359 agaggacttggacggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtg 458  Q
     ||| |||||||||||| ||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||  |||||||||  ||     
T  42134612 ggagcacttggacggagggacctttttgatggacgtctgacaaattcagggactaagttgatatttcgcataattgagggatgattttggccgacccgta 42134513  T
Q  459 aaaattcagggacgaatttgatggttcactc 489  Q
    |||||||| ||||||||||||||||||||||    
T  42134512 aaaattcaaggacgaatttgatggttcactc 42134482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 259 - 489
Target Start/End: Original strand, 35479870 - 35480099
Alignment:
Q  259 ttttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaaggctaac 358  Q
    ||||| ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||| |||||||| | ||||||||||| | | |||||    
T  35479870 ttttcaaattcaatcaaattagtccctgaacacgtggcttctttcttgccacgcgtacaagacaacaaagcatgcatggcgacagatcagcatg-ctaac 35479968  T
Q  359 agaggacttggacggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtg 458  Q
    |||| |||||||||||  ||| ||||||||||||||||||||||||||  || |||||||||||||||||||||||||||| ||| ||||| ||   |||    
T  35479969 agagcacttggacggaaggacctttttgatggacgtctgacaaattcatagattaagttgatatttcgcataattgagggatgaatttggctgatccgtg 35480068  T
Q  459 aaaattcagggacgaatttgatggttcactc 489  Q
    |||||||| ||||||| ||||||||||||||    
T  35480069 aaaattcaaggacgaagttgatggttcactc 35480099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 259 - 489
Target Start/End: Complemental strand, 27940838 - 27940608
Alignment:
Q  259 ttttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaaggctaac 358  Q
    |||||||| ||||||||||| |||||| |||||||||||||||||||||||||||||||||||| |||| ||||||||   |||  |||| | |||||||    
T  27940838 ttttccaaatcaatcaaattcgtccctgaacacgtggcttccttcttgccacgcgtacaagacagcacatcatgcaaggttacatgtcagcatggctaac 27940739  T
Q  359 agaggacttggacggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtg 458  Q
     |||  | |  |||||| ||| |||||||||||||||||| ||||||||||| ||| |||||||||||||||||||||||||||| ||| || || ||||    
T  27940738 ggagcccgttaacggagggacctttttgatggacgtctgataaattcaaggattaaattgatatttcgcataattgagggacgaatttgaccaacctgtg 27940639  T
Q  459 aaaattcagggacgaatttgatggttcactc 489  Q
    ||||||||||||| || ||||||||||||||    
T  27940638 aaaattcagggactaaattgatggttcactc 27940608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 259 - 489
Target Start/End: Original strand, 47269350 - 47269580
Alignment:
Q  259 ttttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaaggctaac 358  Q
    |||||||| ||||||||||| |||||| ||||||||||||||||||||||||||||||| |||| |||| ||||| ||||||||  |||| | |||||||    
T  47269350 ttttccaaatcaatcaaattcgtccctgaacacgtggcttccttcttgccacgcgtacaggacagcacaccatgccagacgacatgtcagcatggctaac 47269449  T
Q  359 agaggacttggacggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtg 458  Q
     |||  | |  |||||| ||| |||||||||||||| ||||||||||| |||  || |||| |||||| ||||||||||||| || |||||||||| |||    
T  47269450 ggagcccgttaacggagggacctttttgatggacgtttgacaaattcagggatgaaattgaaatttcgtataattgagggactaatttggccgacgcgtg 47269549  T
Q  459 aaaattcagggacgaatttgatggttcactc 489  Q
    |||||||||||||||||||||||||||||||    
T  47269550 aaaattcagggacgaatttgatggttcactc 47269580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 113; E-Value: 8e-57
Query Start/End: Original strand, 259 - 439
Target Start/End: Original strand, 45380878 - 45381058
Alignment:
Q  259 ttttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaaggctaac 358  Q
    ||||||||||||||||||||||||| | ||||||||||||||||||||||||| |||||||||||||||||||||| | |||||  |||  | |||||||    
T  45380878 ttttccaattcaatcaaattagtccttgaacacgtggcttccttcttgccacgtgtacaagacaacacagcatgcagggcgacatgtcaccatggctaac 45380977  T
Q  359 agaggacttggacggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgaggga 439  Q
     ||| ||||||||||||  || |||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||    
T  45380978 ggagcacttggacggaggaacctttttgatggacgtctgacaaattcatgaactaagttgatatttcgcataattgaggga 45381058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 259 - 489
Target Start/End: Original strand, 18183838 - 18184067
Alignment:
Q  259 ttttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaaggctaac 358  Q
    ||||||| ||| ||||||||||||| | ||||||||||||| || |||||||| ||||||||||||||| |||||  ||||||| ||||| | |||||||    
T  18183838 ttttccacttccatcaaattagtccttgaacacgtggcttcttttttgccacgtgtacaagacaacacaacatgctggacgacaaatcagcatggctaac 18183937  T
Q  359 agaggacttggacggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtg 458  Q
     ||| ||||| | | || |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||  ||||||||   ||     
T  18183938 ggagcacttg-atgaagggacatttttgatggacgtctgacaaattcagggactaagttgatatttcgcataattgagggatgattttggccgaaccgta 18184036  T
Q  459 aaaattcagggacgaatttgatggttcactc 489  Q
    ||||||||  |||||||||||||||||||||    
T  18184037 aaaattcaaagacgaatttgatggttcactc 18184067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 259 - 489
Target Start/End: Original strand, 33685143 - 33685372
Alignment:
Q  259 ttttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaaggctaac 358  Q
    ||||||||||||||||||||||||| | ||||||||||||||||||||||||| |||||||||||| || |||||| | ||||| ||| | | |||||||    
T  33685143 ttttccaattcaatcaaattagtccttgaacacgtggcttccttcttgccacgtgtacaagacaactcaacatgcagggcgacacatcggcatggctaac 33685242  T
Q  359 agaggacttggacggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtg 458  Q
     ||| ||||||| |||| ||   ||||||||||  | |||||||||||| || ||| |||||||||||||||||||||||| ||| ||| |||||  ||     
T  33685243 ggagcacttggatggaggga-tcttttgatggagatgtgacaaattcaatgattaaattgatatttcgcataattgagggatgaatttgaccgacccgta 33685341  T
Q  459 aaaattcagggacgaatttgatggttcactc 489  Q
    |||||||||||||||||||||||||||||||    
T  33685342 aaaattcagggacgaatttgatggttcactc 33685372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 259 - 489
Target Start/End: Complemental strand, 44157662 - 44157433
Alignment:
Q  259 ttttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaaggctaac 358  Q
    ||||||||||||||||||||||||  | ||||||||||||||||||||||||| ||||||||||||||| |||||| | |||||  |||  | |||| ||    
T  44157662 ttttccaattcaatcaaattagtct-tgaacacgtggcttccttcttgccacgtgtacaagacaacacaacatgcagggcgacatgtcactatggctgac 44157564  T
Q  359 agaggacttggacggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtg 458  Q
     ||| |||| ||||||  ||| ||||| |||||||||| ||||||||| ||||||||||||||||| |||||||||||||| ||| |||||||||  |||    
T  44157563 ggagcacttagacggaaggactttttttatggacgtctaacaaattcagggactaagttgatattttgcataattgagggatgaatttggccgacccgtg 44157464  T
Q  459 aaaattcagggacgaatttgatggttcactc 489  Q
    |||||| | |||||| |||||||||||||||    
T  44157463 aaaatttaaggacgagtttgatggttcactc 44157433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 11 - 203
Target Start/End: Original strand, 18183589 - 18183786
Alignment:
Q  11 cacagatacttgataaacaacaggaaagatgttacctttaatcacaatcgaacacacaaacttcaaaaatgtcagaatcgccggagatgatgatgatttt 110  Q
    |||||| ||||||||||| | ||||||| |||||||||||| ||||  |||||||| |||||||||||| || |||||||||||||||||||||||||||    
T  18183589 cacagaaacttgataaactagaggaaaggtgttacctttaaccacagccgaacacagaaacttcaaaaacgtgagaatcgccggagatgatgatgatttt 18183688  T
Q  111 ggaggggtgaaaatggaggaagttttagcgagaagaagaagggtcaaggacgtttttgatgtt-----ctgaaatgtgaagaaggaggtatgggtaat 203  Q
    |||| ||||| ||||||| ||||||||||| |||| ||||||||||| |||||||||||||||      |||||||| | ||||||||||||||||||    
T  18183689 ggagaggtgagaatggagaaagttttagcgggaaggagaagggtcaatgacgtttttgatgtttctgagtgaaatgtaaggaaggaggtatgggtaat 18183786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 19 - 211
Target Start/End: Complemental strand, 42134956 - 42134759
Alignment:
Q  19 cttgataaacaacaggaaagatgttacctttaatcacaatcgaacacacaaacttcaaaaatgtcagaatcgccggagatgatgatgattttggaggggt 118  Q
    |||||||||||||  ||||| |||||||||||||||||  |||||||| |||||||||||| |||||||||||||  ||| |||||||||||||||||||    
T  42134956 cttgataaacaacctgaaaggtgttacctttaatcacatccgaacacataaacttcaaaaacgtcagaatcgccgatgattatgatgattttggaggggt 42134857  T
Q  119 gaaaatggaggaagttttagcgagaagaagaagggtcaaggacgtttttgatgtt-----ctgaaatgtgaagaaggaggtatgggtaatgcaggggc 211  Q
    || ||||||| |||||||||||  |||| ||| ||||||||| ||||||||||||     ||||||||||||||| |||||||||||||||| |||||    
T  42134856 gagaatggagaaagttttagcggaaagatgaaaggtcaaggatgtttttgatgtttctgactgaaatgtgaagaaagaggtatgggtaatgccggggc 42134759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 18 - 209
Target Start/End: Complemental strand, 6575645 - 6575448
Alignment:
Q  18 acttgataaacaacaggaaagatgttaccttta-atcacaatcgaacacacaaacttcaaaaatgtcagaatcgccggagatgatgatgattttggaggg 116  Q
    ||||||||||||||||||||   |||||||||  |  |||| |||||||| |||||||||||| |||||||||  |||||||||||||||||||||||||    
T  6575645 acttgataaacaacaggaaaagcgttacctttttaaaacaaccgaacacataaacttcaaaaacgtcagaatcatcggagatgatgatgattttggaggg 6575546  T
Q  117 gtgaaaatggaggaagttttagcgagaagaagaagggtcaaggacgtttttgatgtt-----ctgaaatgtgaagaaggaggtatgggtaatgcaggg 209  Q
    |||| ||||||  ||||||||| | |||| ||||||||||||||||||||| || ||     ||||||||||||||||||||||||||||||||||||    
T  6575545 gtgagaatggataaagttttagtgggaaggagaagggtcaaggacgttttttatttttctaactgaaatgtgaagaaggaggtatgggtaatgcaggg 6575448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 265 - 420
Target Start/End: Complemental strand, 6575414 - 6575261
Alignment:
Q  265 aattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaaggctaacagagga 364  Q
    ||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| ||||| | |||  |||||| |    
T  6575414 aattcaatcaaattagtccttgaacacgtggcttccttcttgccacgcgtacaagacaacaaagcatgcatgacgacatatcagcatggc--acagagca 6575317  T
Q  365 cttggacggagtgacatttttgatggacgtctgacaaattcaaggactaagttgat 420  Q
    ||| ||||||  ||| |||||||| || |||||||||||||| |||||||||||||    
T  6575316 ctttgacggaaggacctttttgatagatgtctgacaaattcagggactaagttgat 6575261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 41 - 205
Target Start/End: Original strand, 45380652 - 45380822
Alignment:
Q  41 gttacctttaatcacaatcgaacacacaaacttcaaaaatgtcagaatcgccggagatgatgatgattttggaggggtgaaaatggaggaagttttagcg 140  Q
    ||||||||||||||||  |||||||| |||||||||||| |||||||||||||| ||||||||||||||||||||||||| ||||||| |||||||||||    
T  45380652 gttacctttaatcacagccgaacacataaacttcaaaaacgtcagaatcgccggtgatgatgatgattttggaggggtgagaatggagaaagttttagcg 45380751  T
Q  141 agaagaagaagggtcaaggacgtttttgatgtt-----ctgaaatgtgaagaa-ggaggtatgggtaatgc 205  Q
      ||   ||| ||||||||| ||||||||||||     ||||||||||||||| |||||||| ||||||||    
T  45380752 gaaatgtgaaaggtcaaggatgtttttgatgtttctgactgaaatgtgaagaagggaggtatcggtaatgc 45380822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 19 - 211
Target Start/End: Original strand, 47269103 - 47269300
Alignment:
Q  19 cttgataaacaacaggaaagatgttacctttaatcacaatcgaacacacaaacttcaaaaatgtcagaatcgccggagatgatgatgattttggaggggt 118  Q
    |||||||||||| ||||||| |||||||||| |||||  |||||||||  ||||||||| | | ||||||||  |||||||| |||||||||||||||||    
T  47269103 cttgataaacaaaaggaaaggtgttacctttgatcacggtcgaacacaggaacttcaaacacgccagaatcgatggagatgaggatgattttggaggggt 47269202  T
Q  119 gaaaatggaggaagttttagcgagaagaagaagggtcaaggacgtttttgat-gttctg----aaatgtgaagaaggaggtatgggtaatgcaggggc 211  Q
    |||||||||| | ||||||||| |||| ||||| |||||||| ||||||||| ||||||    ||||||||||||| ||| ||  |||||||||||||    
T  47269203 gaaaatggagaacgttttagcgggaaggagaagagtcaaggatgtttttgatggttctgagtaaaatgtgaagaagaaggaatatgtaatgcaggggc 47269300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 19 - 211
Target Start/End: Complemental strand, 44158260 - 44158066
Alignment:
Q  19 cttgataaacaacaggaaagatgttacctttaatcacaatcgaacacacaaacttcaaaaatgtcagaatcgccggagatgatgatgattttggaggggt 118  Q
    |||||||||||||  |||||  ||||||||||||||||  |||||||| |||||||||||| |||||||||||||| |||||||||||||||| | ||||    
T  44158260 cttgataaacaacctgaaaggcgttacctttaatcacagccgaacacataaacttcaaaaaagtcagaatcgccggtgatgatgatgattttgaaagggt 44158161  T
Q  119 gaaaatggaggaagttttagcgagaagaagaagggtcaaggacgtttttgatgtt-----ctgaaatgtgaagaaggaggtatgggtaatgcaggggc 211  Q
    || ||||||| |||||||||    |||  ||| ||||||||| ||||||||||||     |||||||||   ||||||||||||||||||||||||||    
T  44158160 gagaatggagaaagttttagtagaaaggtgaaaggtcaaggatgtttttgatgtttctgactgaaatgt---gaaggaggtatgggtaatgcaggggc 44158066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 11 - 122
Target Start/End: Original strand, 33682868 - 33682979
Alignment:
Q  11 cacagatacttgataaacaacaggaaagatgttacctttaatcacaatcgaacacacaaacttcaaaaatgtcagaatcgccggagatgatgatgatttt 110  Q
    |||||| ||||||||||||| |||||||  |||||||||||||||| ||||||||| |||||||||||| |||| |||||||||||||||||||||||||    
T  33682868 cacagaaacttgataaacaataggaaaggcgttacctttaatcacagtcgaacacagaaacttcaaaaacgtcataatcgccggagatgatgatgatttt 33682967  T
Q  111 ggaggggtgaaa 122  Q
    | ||||| ||||    
T  33682968 gaaggggagaaa 33682979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 18 - 211
Target Start/End: Original strand, 35479617 - 35479816
Alignment:
Q  18 acttgataaacaacaggaaagatgttaccttt---aatcacaatcgaacacacaaacttcaaaaatgtcagaatcgccggagatgatgatgattttggag 114  Q
    |||||||||||||||||||||  |||||||||   ||  |||| |||| ||| ||||||||||||  ||||||||| || ||||||||||||||||||||    
T  35479617 acttgataaacaacaggaaaggcgttacctttttgaa--acaaccgaatacagaaacttcaaaaacatcagaatcgtcgaagatgatgatgattttggag 35479714  T
Q  115 gggtgaaaatggaggaagttttagcgagaagaagaagggtcaaggacgtttttgatgtt-----ctgaaatgtgaagaaggaggtatgggtaatgcaggg 209  Q
     || || |||| |  ||||||||| | |||| ||||||||||||||||||||| || ||     ||||||| |||||||||| |||||||||||| ||||    
T  35479715 aggcgagaatgaataaagttttagtgggaaggagaagggtcaaggacgttttttatttttctgactgaaatatgaagaaggatgtatgggtaatgtaggg 35479814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 398 - 489
Target Start/End: Original strand, 5784867 - 5784958
Alignment:
Q  398 acaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatggttcactc 489  Q
    ||||||||| ||| ||| |||||||||||||||||||||||||||||||| |||||  ||||||||||||||||||| |||||| |||||||    
T  5784867 acaaattcagggattaaattgatatttcgcataattgagggacgaagttgaccgacccgtgaaaattcagggacgaagttgatgattcactc 5784958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 398 - 489
Target Start/End: Original strand, 31803700 - 31803791
Alignment:
Q  398 acaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatggttcactc 489  Q
    ||||||||| ||| ||| |||||||||||||||||||| |||||||||||||||||  ||||||||||||||||||| |||||| |||||||    
T  31803700 acaaattcagggattaaattgatatttcgcataattgaaggacgaagttggccgacccgtgaaaattcagggacgaagttgatgattcactc 31803791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 398 - 489
Target Start/End: Complemental strand, 11152636 - 11152545
Alignment:
Q  398 acaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatggttcactc 489  Q
    ||||||||  ||| ||| |||||||||||||||||||||||||||| |||||||||  ||||||||||||||||||| |||||| |||||||    
T  11152636 acaaattctgggattaaattgatatttcgcataattgagggacgaaattggccgacccgtgaaaattcagggacgaagttgatgattcactc 11152545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 398 - 489
Target Start/End: Complemental strand, 45379176 - 45379085
Alignment:
Q  398 acaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatggttcactc 489  Q
    ||||||| | ||| ||| |||||||||||||||||| |||||||||||||||||||  ||||||||||||||||||| |||||| |||||||    
T  45379176 acaaatttagggattaaattgatatttcgcataattaagggacgaagttggccgacccgtgaaaattcagggacgaagttgatgattcactc 45379085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 271 - 479
Target Start/End: Complemental strand, 2869797 - 2869589
Alignment:
Q  271 atcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaaggctaacagaggacttgga 370  Q
    ||||| ||||||| |  ||| |||||| |||| ||| |||| ||||| ||||||||| ||||||||| |||| ||||  |   |||||||||   |||||    
T  2869797 atcaatttagtccttgtacatgtggctgccttgttgacacgtgtacaggacaacacatcatgcaagatgacacatcatcaccactaacagagcttttgga 2869698  T
Q  371 cggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcaggga 470  Q
    ||||| |||  ||||||||||||||||  ||||| |  |||||| | ||||||||||| |||| ||||||||| ||| ||||  | |||||||||| |||    
T  2869697 cggagggaccattttgatggacgtctgtaaaatttagagactaaatagatatttcgcaaaattcagggacgaatttgaccgatttttgaaaattcaagga 2869598  T
Q  471 cgaatttga 479  Q
    |||||||||    
T  2869597 cgaatttga 2869589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 398 - 489
Target Start/End: Complemental strand, 47264215 - 47264124
Alignment:
Q  398 acaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatggttcactc 489  Q
    ||||||||| |||  || |||| |||||||||||||||||||| || |||||||||| |||||||||||||||| || ||||||||||||||    
T  47264215 acaaattcagggatgaaattgaaatttcgcataattgagggactaaattggccgacgcgtgaaaattcagggactaacttgatggttcactc 47264124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 271 - 449
Target Start/End: Complemental strand, 15104659 - 15104481
Alignment:
Q  271 atcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaaggctaacagaggacttgga 370  Q
    ||||||||||||| |  |||||||||| |||| ||| |||| ||||||||||||||||||||||||| |||| ||||  |   ||||  |||   |||||    
T  15104659 atcaaattagtccttgtacacgtggctgccttattgacacgtgtacaagacaacacagcatgcaagaagacacatcatcaccactaatggagcttttgga 15104560  T
Q  371 cggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggc 449  Q
    ||||  |||  ||||||||||||||||  ||||||| ||||||| | ||||||||||| |||| ||| ||||| |||||    
T  15104559 cggaaggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcaggaacgaatttggc 15104481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 366 - 479
Target Start/End: Original strand, 4855967 - 4856080
Alignment:
Q  366 ttggacggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattc 465  Q
    |||||||||| |||  ||||||||||||||||  ||||||| ||||||| ||||||||||||| |||| ||||||| | ||||||||  | | |||||||    
T  4855967 ttggacggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacgtatttggccgattttttaaaattc 4856066  T
Q  466 agggacgaatttga 479  Q
    | ||||||||||||    
T  4856067 aaggacgaatttga 4856080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 271 - 479
Target Start/End: Original strand, 25278274 - 25278482
Alignment:
Q  271 atcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaaggctaacagaggacttgga 370  Q
    ||||| ||||||| || |||||||||| |||| ||| |||| ||||| |||| |||| ||||||||| ||||  |||  |   ||||| |||   |||||    
T  25278274 atcaatttagtccttatacacgtggctgccttgttgacacgtgtacatgacagcacatcatgcaagaggacacgtcatcaccactaacggagcttttgga 25278373  T
Q  371 cggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcaggga 470  Q
    ||||| |||  ||||||||||||| ||  ||||||||||||||| | | ||||||||| |||| ||||||||| ||| ||||  | | |||||||| |||    
T  25278374 cggagggaccattttgatggacgtatgtaaaattcaaggactaaataggtatttcgcaaaattcagggacgaatttgaccgattttttaaaattcaagga 25278473  T
Q  471 cgaatttga 479  Q
    |||||||||    
T  25278474 cgaatttga 25278482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 271 - 479
Target Start/End: Complemental strand, 37344560 - 37344352
Alignment:
Q  271 atcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaaggctaacagaggacttgga 370  Q
    ||||| ||||||| || |||||||||| |||| ||| |||| ||||| ||||||||| ||||||||| ||||  |||  |   ||||| |||   |||||    
T  37344560 atcaatttagtccttatacacgtggctgccttgttgacacgtgtacatgacaacacatcatgcaagaggacacgtcatcaccactaacggagcttttgga 37344461  T
Q  371 cggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcaggga 470  Q
    ||||| |||  ||||||||||||| ||  |||||||| |||||| | | ||||||||| |||| ||||||||| ||| ||||  | | |||||||| |||    
T  37344460 cggagggaccattttgatggacgtatgtaaaattcaaagactaaataggtatttcgcaaaattcagggacgaatttgaccgattttttaaaattcaagga 37344361  T
Q  471 cgaatttga 479  Q
    |||||||||    
T  37344360 cgaatttga 37344352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 398 - 481
Target Start/End: Original strand, 27952500 - 27952583
Alignment:
Q  398 acaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatg 481  Q
    ||||||||| ||| ||| |||||||||||||||||||||||||||| |||||||||  |||| ||||||||||| || ||||||    
T  27952500 acaaattcagggattaaattgatatttcgcataattgagggacgaatttggccgacccgtgataattcagggactaagttgatg 27952583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 398 - 489
Target Start/End: Complemental strand, 33679350 - 33679259
Alignment:
Q  398 acaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatggttcactc 489  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||| ||||| |||  || |||||||| |||| || |||||| |||||||    
T  33679350 acaaattcaaggattaaattgatatttcgcataattgagggacgaatttggctgacccgtaaaaattcatggacaaaattgatgattcactc 33679259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 366 - 479
Target Start/End: Original strand, 34778139 - 34778252
Alignment:
Q  366 ttggacggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattc 465  Q
    |||||||||| |||  ||||||||||| ||||  ||||||| ||||||| ||||||||||||| |||| ||||||| | ||||||||  | | |||||||    
T  34778139 ttggacggagggaccattttgatggacatctgtaaaattcagggactaatttgatatttcgcaaaattcagggacgtatttggccgattttttaaaattc 34778238  T
Q  466 agggacgaatttga 479  Q
    | ||||||||||||    
T  34778239 aaggacgaatttga 34778252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 400 - 489
Target Start/End: Complemental strand, 35478176 - 35478087
Alignment:
Q  400 aaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatggttcactc 489  Q
    ||||||| ||| ||| ||||||||| ||||||||||||||| || |||||||||  ||||||||||||||| ||| |||||| |||||||    
T  35478176 aaattcagggattaaattgatattttgcataattgagggactaatttggccgacccgtgaaaattcagggatgaagttgatgattcactc 35478087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 366 - 479
Target Start/End: Original strand, 46583557 - 46583670
Alignment:
Q  366 ttggacggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattc 465  Q
    |||||||||| ||||  |||||||||||||||  ||||||| ||||||| ||||||||||||| |||| |||||| || ||| ||||  | | |||||||    
T  46583557 ttggacggagggacaaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacaaaattgaccgatttttcaaaattc 46583656  T
Q  466 agggacgaatttga 479  Q
    | ||||||||||||    
T  46583657 aaggacgaatttga 46583670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 271 - 479
Target Start/End: Original strand, 6818584 - 6818792
Alignment:
Q  271 atcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaaggctaacagaggacttgga 370  Q
    ||||||||||||| |  |||||||||| |||| ||| |||| ||||| ||||||||| ||||||||| ||||  |||  |   ||||| |||   |||||    
T  6818584 atcaaattagtccttgtacacgtggctgccttgttgacacgtgtacatgacaacacaacatgcaagaggacatgtcatcaccactaacggagcttttgga 6818683  T
Q  371 cggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcaggga 470  Q
    ||||| |||  ||||||||||||||||  ||||||| ||||||| | ||||||| ||  |||  ||||||||  ||||||||  | | |||||||| |||    
T  6818684 cggagggaccattttgatggacgtctgtaaaattcagggactaaatagatattttgctaaatccagggacgagtttggccgattttttaaaattcaagga 6818783  T
Q  471 cgaatttga 479  Q
    |||||||||    
T  6818784 cgaatttga 6818792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 271 - 479
Target Start/End: Original strand, 31238401 - 31238609
Alignment:
Q  271 atcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaaggctaacagaggacttgga 370  Q
    ||||||||||||| |  |||||||||| |||| ||| |||| ||||| |||||||||||||| |||| ||||  |||  |   ||||| |||   |||||    
T  31238401 atcaaattagtccttgtacacgtggctgccttgttgacacgtgtacatgacaacacagcatggaagaggacacgtcatcaccactaacggagcttttgga 31238500  T
Q  371 cggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcaggga 470  Q
    | ||  |||  ||||||||||||||||  ||||||| ||||||| | ||||||||||| |||| |||||| || ||||||||  | | |||||||| |||    
T  31238501 cagatggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacaaatttggccgattttttaaaattcaagga 31238600  T
Q  471 cgaatttga 479  Q
    | |||||||    
T  31238601 caaatttga 31238609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 416 - 488
Target Start/End: Complemental strand, 46636838 - 46636766
Alignment:
Q  416 ttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatggttcact 488  Q
    |||||||||||||||||||| |||||||||| ||||||  |||||||||||| |||||| |||||| ||||||    
T  46636838 ttgatatttcgcataattgaaggacgaagttagccgacccgtgaaaattcagagacgaagttgatgattcact 46636766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 398 - 489
Target Start/End: Original strand, 44159294 - 44159385
Alignment:
Q  398 acaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatggttcactc 489  Q
    ||||||||| | | ||| ||||||||| |||||||| ||||||||| ||| ||||  |||||||||||||||||||| |||||| |||||||    
T  44159294 acaaattcaggaattaaattgatattttgcataattaagggacgaaattgaccgatctgtgaaaattcagggacgaagttgatgattcactc 44159385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 398 - 489
Target Start/End: Complemental strand, 18180591 - 18180500
Alignment:
Q  398 acaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatggttcactc 489  Q
    ||||||||| | | ||| |||||||||||||||||||||||| ||| ||||||||   |||||||||||||||| || |||| | |||||||    
T  18180591 acaaattcaggaattaaattgatatttcgcataattgagggatgaatttggccgagtcgtgaaaattcagggacaaagttgaggattcactc 18180500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 366 - 452
Target Start/End: Original strand, 9121669 - 9121755
Alignment:
Q  366 ttggacggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccga 452  Q
    |||||||||| |||   |||||||||||||||  ||||||| ||||||| ||||||||||| | |||| ||||||||| ||||||||    
T  9121669 ttggacggagggactgatttgatggacgtctgcaaaattcagggactaatttgatatttcgaaaaatttagggacgaaattggccga 9121755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 384 - 489
Target Start/End: Complemental strand, 5783469 - 5783364
Alignment:
Q  384 ttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatggt 483  Q
    ||||||||||||  ||||||||| ||||||  |||||||||||   ||||| | || ||| |||||||||   | |||||||||||||||| ||||||||    
T  5783469 ttgatggacgtcaaacaaattcagggactattttgatatttcgttaaattgggagatgaatttggccgacccctaaaaattcagggacgaaattgatggt 5783370  T
Q  484 tcactc 489  Q
    ||||||    
T  5783369 tcactc 5783364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 366 - 479
Target Start/End: Original strand, 33602645 - 33602758
Alignment:
Q  366 ttggacggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattc 465  Q
    |||||||||| |||   ||||| |||||||||  ||||||| ||||||| |||||||||| || |||| ||||||||| ||| ||||  | | |||||||    
T  33602645 ttggacggagggactaatttgacggacgtctgtaaaattcagggactaatttgatatttcacaaaattcagggacgaaattgaccgatttttcaaaattc 33602744  T
Q  466 agggacgaatttga 479  Q
    | ||||||||||||    
T  33602745 aaggacgaatttga 33602758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 387 - 479
Target Start/End: Original strand, 25278975 - 25279067
Alignment:
Q  387 atggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 479  Q
    |||||||||||  ||||||| ||||||| | ||||||||||| |||| ||| ||||| ||||| ||  | |||||||||| ||||||||||||    
T  25278975 atggacgtctgtaaaattcagggactaaatagatatttcgcaaaatttaggaacgaatttggctgatttttgaaaattcaaggacgaatttga 25279067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 421 - 481
Target Start/End: Complemental strand, 36894890 - 36894830
Alignment:
Q  421 atttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatg 481  Q
    |||||||||||||||  ||||||||||||||||  || |||||||||||||||| ||||||    
T  36894890 atttcgcataattgaatgacgaagttggccgacccgtaaaaattcagggacgaagttgatg 36894830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 400 - 479
Target Start/End: Complemental strand, 26223676 - 26223597
Alignment:
Q  400 aaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 479  Q
    ||||||| ||||||| ||||||||||||| |||| ||||||||| ||| ||||  | | |||||||| ||||||||||||    
T  26223676 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttga 26223597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 288 - 479
Target Start/End: Complemental strand, 27087483 - 27087293
Alignment:
Q  288 acacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaaggctaacagaggacttggacggagtgacatttttga 387  Q
    |||||||||| |||| ||| |||| ||||||||||||||||||||||||  |||| ||||  |   ||||| |||   |||||||||  | |  ||||||    
T  27087483 acacgtggctgccttgttgacacgtgtacaagacaacacagcatgcaag-ggacacatcatcaccactaacggagcttttggacggatgggccattttga 27087385  T
Q  388 tggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 479  Q
    ||||||| ||  ||||||| ||||||| | ||||||||||| |||| |||||| || ||| ||||  | | |||||| | ||||||||||||    
T  27087384 tggacgtttgtaaaattcagggactaaatagatatttcgcaaaattcagggacaaatttgaccgattttttaaaatttaaggacgaatttga 27087293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 400 - 479
Target Start/End: Complemental strand, 34776658 - 34776579
Alignment:
Q  400 aaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 479  Q
    ||||||| ||||||| ||||||||||| | |||| ||||||||| ||||||||  | | |||||||| ||||||||||||    
T  34776658 aaattcagggactaatttgatatttcgtaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttga 34776579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 400 - 479
Target Start/End: Complemental strand, 46582099 - 46582020
Alignment:
Q  400 aaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 479  Q
    ||||||| ||||||| ||||||||||||| |||| ||||||||| ||||||||  | | |||||||| |||| |||||||    
T  46582099 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacaaatttga 46582020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 402 - 479
Target Start/End: Complemental strand, 8168029 - 8167952
Alignment:
Q  402 attcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 479  Q
    ||||| ||||||| ||||||||||||| |||| || |||||| ||||||||  | | |||||||| ||||||||||||    
T  8168029 attcagggactaatttgatatttcgcaaaattcagagacgaaattggccgatttttcaaaattcaaggacgaatttga 8167952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 387 - 479
Target Start/End: Original strand, 3013498 - 3013590
Alignment:
Q  387 atggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 479  Q
    |||||||||||  ||||||| ||||||| | ||||||||||| |||| | ||||||| ||| | || || | |||||||| ||||||||||||    
T  3013498 atggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcatggacgaatttgactgatgttttaaaattcaaggacgaatttga 3013590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 271 - 443
Target Start/End: Original strand, 50556003 - 50556175
Alignment:
Q  271 atcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaaggctaacagaggacttgga 370  Q
    ||||||||||||| |  ||||||| || |||| ||| |||| ||||| ||||||||||||||||||| ||||   ||  |   ||||| |||   |||||    
T  50556003 atcaaattagtccttgtacacgtgactcccttgttgacacgtgtacatgacaacacagcatgcaagatgacacgccatcaccactaacggagcttttgga 50556102  T
Q  371 cggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaa 443  Q
    ||||| |||  ||||||| ||||||||  ||||| | ||||||| | ||||||||||| |||| || ||||||    
T  50556103 cggagggaccattttgatagacgtctgtaaaatttagggactaaatagatatttcgcaaaattcagagacgaa 50556175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 400 - 479
Target Start/End: Original strand, 8169568 - 8169647
Alignment:
Q  400 aaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 479  Q
    ||||||| ||||||| ||||||||| | | |||| ||||||||| ||||||||  | | |||||||| ||||||||||||    
T  8169568 aaattcagggactaatttgatattttgtaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttga 8169647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 400 - 479
Target Start/End: Complemental strand, 25276831 - 25276752
Alignment:
Q  400 aaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 479  Q
    ||||||| ||||||| ||||||||||||| |||| | ||| ||| ||||||||  | | |||||||| ||||||||||||    
T  25276831 aaattcagggactaatttgatatttcgcaaaattcaaggatgaaattggccgatttttcaaaattcaaggacgaatttga 25276752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 400 - 479
Target Start/End: Original strand, 37345962 - 37346041
Alignment:
Q  400 aaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 479  Q
    ||||||| ||||||| ||||||||||||| |||| ||||| ||| |||| |||  | | |||||||| ||||||||||||    
T  37345962 aaattcagggactaatttgatatttcgcaaaattcagggatgaaattggtcgatttttcaaaattcaaggacgaatttga 37346041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 398 - 489
Target Start/End: Original strand, 42136244 - 42136335
Alignment:
Q  398 acaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatggttcactc 489  Q
    ||||||||| ||| ||| |||||||||||||||||| | ||||||||||| ||||    | |||||| ||| ||||| |||||| |||||||    
T  42136244 acaaattcagggattaaattgatatttcgcataattaaaggacgaagttgaccgatccataaaaatttaggaacgaagttgatgattcactc 42136335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 366 - 489
Target Start/End: Complemental strand, 51122028 - 51121905
Alignment:
Q  366 ttggacggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattc 465  Q
    |||||||||| |||  |||||||||||||  || ||||||| |||| || ||||||||| ||| ||||  || |||| |||||| || |  || ||||||    
T  51122028 ttggacggagggaccattttgatggacgtgagagaaattcagggacgaaattgatattttgcaaaatttgggaacgatgttggctgatgcttgcaaattc 51121929  T
Q  466 agggacgaatttgatggttcactc 489  Q
    | ||||||| |||||| |||||||    
T  51121928 aaggacgaagttgatgattcactc 51121905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 366 - 452
Target Start/End: Original strand, 47013083 - 47013169
Alignment:
Q  366 ttggacggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccga 452  Q
    |||||||||| |||   |||||||||||| ||  ||||||| ||||||| ||||||||||| | |||| ||||||||| ||| ||||    
T  47013083 ttggacggagggactgatttgatggacgtttgcaaaattcagggactaatttgatatttcgaaaaattcagggacgaaattgtccga 47013169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 366 - 440
Target Start/End: Original strand, 51896153 - 51896227
Alignment:
Q  366 ttggacggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggac 440  Q
    |||||||||| |||  ||||||||||| ||||  ||||||| ||||||| | ||||||||||| |||| ||||||    
T  51896153 ttggacggagggactattttgatggacatctgtaaaattcagggactaaatagatatttcgcaaaattcagggac 51896227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 168; Significance: 1e-89; HSPs: 53)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 168; E-Value: 1e-89
Query Start/End: Original strand, 11 - 206
Target Start/End: Original strand, 29909307 - 29909502
Alignment:
Q  11 cacagatacttgataaacaacaggaaagatgttacctttaatcacaatcgaacacacaaacttcaaaaatgtcagaatcgccggagatgatgatgatttt 110  Q
    |||||| |||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||| |||||    
T  29909307 cacagaaacttgataaacaacaggaaagacgttacctttaatcacagtcgaacacacaaacttcaaaaacgtcagaatcaccggagatgatgataatttt 29909406  T
Q  111 ggaggggtgaaaatggaggaagttttagcgagaagaagaagggtcaaggacgtttttgatgttctgaaatgtgaagaaggaggtatgggtaatgca 206  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29909407 ggaggggtgaaaatggaggaagttttagcgggaagaagaagggtcaaggacgtttttgatgttctgaaatgtgaagaaggaggtatgggtaatgca 29909502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 166; E-Value: 2e-88
Query Start/End: Original strand, 252 - 489
Target Start/End: Original strand, 29909547 - 29909784
Alignment:
Q  252 ctcaacattttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaa 351  Q
    |||||| ||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||  ||||||||||  |     
T  29909547 ctcaactttttcaaattcaatcaaattagtcccttaacacgtggcttccttcttgccacgcgtacaagacaacacaacatgcaacgcgacagatcaacat 29909646  T
Q  352 ggctaacagaggacttggacggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccg 451  Q
    ||||||||||| |||||||||||| ||| |||||||||||||||||||||||| | ||||||| ||||||||||||||||||||||||| ||||||||||    
T  29909647 ggctaacagagcacttggacggagggacctttttgatggacgtctgacaaattaagggactaaattgatatttcgcataattgagggacaaagttggccg 29909746  T
Q  452 acgtgtgaaaattcagggacgaatttgatggttcactc 489  Q
    ||| |||||||||||||||| |||||||||||||||||    
T  29909747 acgcgtgaaaattcagggacaaatttgatggttcactc 29909784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 162; E-Value: 4e-86
Query Start/End: Original strand, 18 - 211
Target Start/End: Original strand, 39050 - 39243
Alignment:
Q  18 acttgataaacaacaggaaagatgttacctttaatcacaatcgaacacacaaacttcaaaaatgtcagaatcgccggagatgatgatgattttggagggg 117  Q
    ||||||||||||||||||||| |||||||||||||||||  |||||||||||||||||||||| ||||||||| |||| |||||||||||||||||||||    
T  39050 acttgataaacaacaggaaaggtgttacctttaatcacagccgaacacacaaacttcaaaaatttcagaatcgtcggacatgatgatgattttggagggg 39149  T
Q  118 tgaaaatggaggaagttttagcgagaagaagaagggtcaaggacgtttttgatgttctgaaatgtgaagaaggaggtatgggtaatgcaggggc 211  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  39150 tgaaaatggaggaagtattagcgagaagaagaagggtcaaggacgttttttatgttctgaaatgtgaagaaggaggtatgggtaatgcaggggc 39243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 162; E-Value: 4e-86
Query Start/End: Original strand, 252 - 489
Target Start/End: Original strand, 39284 - 39521
Alignment:
Q  252 ctcaacattttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaa 351  Q
    ||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |     
T  39284 ctcaacattttccaattcaatcaaatttgtccctgaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacatatcagcat 39383  T
Q  352 ggctaacagaggacttggacggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccg 451  Q
    ||||||| ||  |||||||||| | ||| ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||| || |||||||| |    
T  39384 ggctaacggaacacttggacggggggacctttttgatgaacgtctgacaaattcagggactaagttgatatttcgcataattgaggtacaaagttggctg 39483  T
Q  452 acgtgtgaaaattcagggacgaatttgatggttcactc 489  Q
    ||| |||||||||| ||||| |||||||||||||||||    
T  39484 acgcgtgaaaattcggggacaaatttgatggttcactc 39521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 158; E-Value: 1e-83
Query Start/End: Original strand, 252 - 489
Target Start/End: Original strand, 92234 - 92470
Alignment:
Q  252 ctcaacattttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaa 351  Q
    ||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |     
T  92234 ctcaacattttccaattcaatcaaatttgtccctgaacacgtggcttccttcttgccacacgtacaagacaacacagcatgcaagacgacatatcagcat 92333  T
Q  352 ggctaacagaggacttggacggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccg 451  Q
    ||||||| ||| |||||||| ||| ||| ||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| | |    
T  92334 ggctaacggagcacttggactgagggacctttttgatgaacgtctgacaaattcaaagactaagttgatatttcgcataattgaggtacgaagttgactg 92433  T
Q  452 acgtgtgaaaattcagggacgaatttgatggttcactc 489  Q
    | | |||||||||||||||| |||||||||||||||||    
T  92434 atgcgtgaaaattcagggac-aatttgatggttcactc 92470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 155; E-Value: 7e-82
Query Start/End: Original strand, 18 - 211
Target Start/End: Original strand, 91999 - 92193
Alignment:
Q  18 acttgataaacaacaggaaagatgttacctttaatcacaatcgaacacacaaacttcaaaaatgtcagaatcgccggagatgatgatgattttggagggg 117  Q
    |||||||||||||||| |||| |||||||||||||||||  |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  91999 acttgataaacaacagaaaaggtgttacctttaatcacagccgaacacacaaacttcaaaaatgtcagaatcgtcggagatgatgatgattttggagggg 92098  T
Q  118 tgaaaatggaggaagttttagcgagaagaagaagggtcaaggacg-tttttgatgttctgaaatgtgaagaaggaggtatgggtaatgcaggggc 211  Q
    |||||||||||||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||    
T  92099 tgaaaatggaggaagtattagcgagaagaagaagggtcaaggacgtttttttatgttctgaaatgtgaagaaggaggtatgggtaatgcaagggc 92193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 259 - 489
Target Start/End: Complemental strand, 37417503 - 37417273
Alignment:
Q  259 ttttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaaggctaac 358  Q
    |||||||| ||||| |||||||||| | ||||||||||||||||||||||||| |||||||||||||||||||||| | | ||||||||| | |||||||    
T  37417503 ttttccaaatcaattaaattagtccttgaacacgtggcttccttcttgccacgtgtacaagacaacacagcatgcagggcaacagatcagcatggctaac 37417404  T
Q  359 agaggacttggacggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtg 458  Q
     ||| ||||||||| || ||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| |||||||||   ||    
T  37417403 ggagcacttggacgaagggacctttttgatggacgtctgacaaattcagggactaagttgatatttcgcataattgagggatgaatttggccgacccatg 37417304  T
Q  459 aaaattcagggacgaatttgatggttcactc 489  Q
    |||||||| |||||||| |||||||||||||    
T  37417303 aaaattcaaggacgaatatgatggttcactc 37417273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 259 - 489
Target Start/End: Complemental strand, 15372729 - 15372499
Alignment:
Q  259 ttttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaaggctaac 358  Q
    |||||||| ||||||||||| |||||| |||||||||||||||||||||||||||||||||||| |||| |||||||| |||||  | || | |||||||    
T  15372729 ttttccaaatcaatcaaattcgtccctgaacacgtggcttccttcttgccacgcgtacaagacagcacaacatgcaaggcgacatgttagcatggctaac 15372630  T
Q  359 agaggacttggacggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtg 458  Q
     |||  | |  |||||| ||| |||||||||||||||||| ||||||| ||| ||| ||||||||| ||||||||||||| |||| |||||||||  |||    
T  15372629 ggagcccgttaacggagggacctttttgatggacgtctgataaattcagggattaaattgatattttgcataattgaggggcgaatttggccgacccgtg 15372530  T
Q  459 aaaattcagggacgaatttgatggttcactc 489  Q
    ||||||||||||| || ||||||||||||||    
T  15372529 aaaattcagggactaaattgatggttcactc 15372499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 259 - 489
Target Start/End: Complemental strand, 41706769 - 41706539
Alignment:
Q  259 ttttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaaggctaac 358  Q
    |||||||| ||||||||||| |||||| |||||||| ||||||||||||||||||||||||||| ||||||||||||| |||||  |||| | |||||||    
T  41706769 ttttccaaatcaatcaaattcgtccctgaacacgtgacttccttcttgccacgcgtacaagacagcacagcatgcaaggcgacatgtcagcatggctaac 41706670  T
Q  359 agaggacttggacggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtg 458  Q
     |||  | |  |||||| ||| ||||||||||||||  || ||||||| ||| ||| |||||||||||||||||||||||||||| ||| |||||  |||    
T  41706669 ggagcccgttaacggagggacctttttgatggacgttcgataaattcagggattaaattgatatttcgcataattgagggacgaatttgaccgacccgtg 41706570  T
Q  459 aaaattcagggacgaatttgatggttcactc 489  Q
    |||||||||| || || ||||||||||||||    
T  41706569 aaaattcaggaactaaattgatggttcactc 41706539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 18 - 207
Target Start/End: Complemental strand, 42002086 - 42001893
Alignment:
Q  18 acttgataaacaacaggaaagatgttacctttaatcacaatcgaacacacaaacttcaaaaatgtcagaatcgccggagatgatgatgattttggagggg 117  Q
    ||||||||||||||||||||| |||||||||||||||||  |||||||| |||||||||||| || | |||||||||||||||||||| |||||||||||    
T  42002086 acttgataaacaacaggaaaggtgttacctttaatcacagccgaacacagaaacttcaaaaacgtaataatcgccggagatgatgatg-ttttggagggg 42001988  T
Q  118 tgaaaatggaggaagttttagcgagaagaagaagggtcaaggacgtttttgatgtt-----ctgaaatgtgaagaaggaggtatgggtaatgcag 207  Q
    ||| ||||| | ||||||||||| |||| |||||| |||| || ||||||||||||     ||||||||||||||||||||||||||||||||||    
T  42001987 tgataatggggaaagttttagcgggaaggagaaggatcaatgatgtttttgatgtttctgactgaaatgtgaagaaggaggtatgggtaatgcag 42001893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 259 - 488
Target Start/End: Complemental strand, 25619890 - 25619661
Alignment:
Q  259 ttttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaaggctaac 358  Q
    |||| |||||||||||||||||||| | |||| |||||||| ||||||||||| ||| |||||||| || ||||||   ||||||||||  | |||||||    
T  25619890 tttttcaattcaatcaaattagtccttgaacatgtggcttctttcttgccacgtgtataagacaacgcaacatgcagagcgacagatcaacatggctaac 25619791  T
Q  359 agaggacttggacggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtg 458  Q
     ||| ||||||| |||| ||| |||||||||||| | ||||||||||| ||||||||||||||||| |||||||||||||| ||| ||| |||||   |     
T  25619790 ggagcacttggatggagggacctttttgatggacatatgacaaattcagggactaagttgatattttgcataattgagggatgaatttgaccgacccata 25619691  T
Q  459 aaaattcagggacgaatttgatggttcact 488  Q
    |||||||| |||||||||||||||||||||    
T  25619690 aaaattcaaggacgaatttgatggttcact 25619661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 259 - 489
Target Start/End: Complemental strand, 15432558 - 15432328
Alignment:
Q  259 ttttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaaggctaac 358  Q
    ||||||||||||||||||||||||| | ||||| || |||||||||||||||| ||||||||||||||| |||||| | |||||  |||| | | ||||     
T  15432558 ttttccaattcaatcaaattagtccttgaacacatgacttccttcttgccacgtgtacaagacaacacaacatgcagggcgacatgtcagcatgactaat 15432459  T
Q  359 agaggacttggacggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtg 458  Q
    |||| ||||||||| |   || ||||||||||||||||||||||||||  |||||| |||||||||||||||||||||||| ||| ||| |||||   |     
T  15432458 agagcacttggacgaatgaacctttttgatggacgtctgacaaattcagagactaaattgatatttcgcataattgagggatgaatttgaccgacccata 15432359  T
Q  459 aaaattcagggacgaatttgatggttcactc 489  Q
    |||||||| |||  |||||||||||||||||    
T  15432358 aaaattcaaggataaatttgatggttcactc 15432328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 287 - 485
Target Start/End: Complemental strand, 42879557 - 42879360
Alignment:
Q  287 aacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaaggctaacagaggacttggacggagtgacatttttg 386  Q
    |||||||| ||||||||||| |||| |||||||||||||||||||||| | ||||| ||||| | | ||||| ||  |||||||||||| ||| ||||||    
T  42879557 aacacgtgacttccttcttgtcacgtgtacaagacaacacagcatgcagggcgacatatcagcatgactaacggaacacttggacggagggacctttttg 42879458  T
Q  387 atggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatggttc 485  Q
    ||||||||||||||||||||  |||||||||||| |||||||||||| ||||| ||| ||| |||||  || |||||| | ||||||||||||||||||    
T  42879457 atggacgtctgacaaattcatagactaagttgat-tttcgcataattaagggatgaatttgaccgacccgtaaaaatttaaggacgaatttgatggttc 42879360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 259 - 489
Target Start/End: Complemental strand, 42001839 - 42001610
Alignment:
Q  259 ttttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaaggctaac 358  Q
    ||||||||||||||||||| ||||| | |||||||| ||||||||||| |||| |||||||||||| || |||||| | ||||| ||||  | |||||||    
T  42001839 ttttccaattcaatcaaatcagtccttgaacacgtgacttccttcttgtcacgtgtacaagacaactcaacatgcagggcgacacatcaacatggctaac 42001740  T
Q  359 agaggacttggacggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtg 458  Q
      || ||||||| |||   || |||||||| || |||||||||||||||||| ||| ||||||||||||||||| ||||||  || |||| | ||  ||     
T  42001739 gaagcacttggatggatgaacctttttgat-gatgtctgacaaattcaaggattaaattgatatttcgcataatagagggataaatttggacaacccgta 42001641  T
Q  459 aaaattcagggacgaatttgatggttcactc 489  Q
    |||||||| ||||||||||||||||||||||    
T  42001640 aaaattcaaggacgaatttgatggttcactc 42001610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 18 - 211
Target Start/End: Complemental strand, 37417756 - 37417558
Alignment:
Q  18 acttgataaacaacaggaaagatgttacctttaatcacaatcgaacacacaaacttcaaaaatgtcagaatcgccggagatgatgatgattttggagggg 117  Q
    ||||||||||  | ||||||| |||||||||||| ||||  ||||||||  ||||||||||| || ||||||| || ||||||||||| |||||||| ||    
T  37417756 acttgataaattagaggaaaggtgttacctttaaccacagccgaacacaacaacttcaaaaacgtgagaatcgtcgaagatgatgatggttttggagagg 37417657  T
Q  118 tgaaaatggaggaagttttagcgagaagaagaagggtcaaggacgtttttgatg-ttct----gaaatgtgaagaaggaggtatgggtaatgcaggggc 211  Q
    ||| |||||||  |||||||||| |||| ||||| ||||||||||||||||||| ||||    ||||||||| | |||| |||||||||||||| ||||    
T  37417656 tgagaatggagacagttttagcgggaaggagaagagtcaaggacgtttttgatgtttctgagagaaatgtgagggaggaagtatgggtaatgcacgggc 37417558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 42 - 211
Target Start/End: Complemental strand, 15432779 - 15432606
Alignment:
Q  42 ttacctttaatcacaatcgaacacacaaacttcaaaaatgtcagaatcgccggagatgatgatgattttggaggggtgaaaatggaggaagttttagcga 141  Q
    ||||||||||| |||  |||||||| |||||||||||| |||||||||||||| ||||||||||||||||||||||||| ||||| | |||||| ||||     
T  15432779 ttacctttaattacagccgaacacagaaacttcaaaaacgtcagaatcgccggtgatgatgatgattttggaggggtgagaatggtgaaagtttgagcgg 15432680  T
Q  142 gaagaagaagggtcaaggacgtttttgatgtt-----ctgaaatgtgaagaaggaggtatgggtaatgcaggggc 211  Q
    |||| || | || ||| || ||||||||||||     ||||||||||||||||| |||||| |||||| ||||||    
T  15432679 gaaggaggaaggccaaagatgtttttgatgtttctgactgaaatgtgaagaagg-ggtatgagtaatgtaggggc 15432606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 11 - 211
Target Start/End: Complemental strand, 42879801 - 42879595
Alignment:
Q  11 cacagatacttgataaacaacaggaaagatgttacctttaatcacaatcgaacacacaaacttcaaaaatgtcagaatcgccggagatgatgatgatttt 110  Q
    |||||| ||||||||||  | ||||||| |||||||||||| ||||| ||||||||  ||||||||||| || |||||||  | ||||||||||| ||||    
T  42879801 cacagaaacttgataaattagaggaaaggtgttacctttaaccacaaccgaacacaacaacttcaaaaacgtgagaatcgttgaagatgatgatggtttt 42879702  T
Q  111 ggaggggtgaaaatggaggaagttttagcgagaagaagaagggtcaaggacgt-ttttgatg-ttct----gaaatgtgaagaaggaggtatgggtaatg 204  Q
    |||| ||||| ||||||| |||||||||| ||||  ||||| ||||||||||| |||| ||| ||||    ||||||||| |||||| ||||||||||||    
T  42879701 ggagaggtgagaatggagaaagttttagcaagaaagagaagagtcaaggacgtttttttatgtttctgagagaaatgtgaggaaggaagtatgggtaatg 42879602  T
Q  205 caggggc 211  Q
    || ||||    
T  42879601 catgggc 42879595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 93 - 211
Target Start/End: Complemental strand, 39926 - 39803
Alignment:
Q  93 ggagatgatgatgattttggaggggtgaaaatggaggaagttttagcgagaagaagaagggtcaaggacgtttttgatgtt-----ctgaaatgtgaaga 187  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||| |||| ||||| |||||||| ||||||||||||     || |||||||||||    
T  39926 ggagatgatgatgattttggaggggtgagaatggagaaagttttagcgggaaggagaagagtcaaggatgtttttgatgtttctgactaaaatgtgaaga 39827  T
Q  188 aggaggtatgggtaatgcaggggc 211  Q
    |||||| ||  |||||||||||||    
T  39826 aggaggaatatgtaatgcaggggc 39803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 398 - 489
Target Start/End: Complemental strand, 11021624 - 11021533
Alignment:
Q  398 acaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatggttcactc 489  Q
    ||||||||| ||| ||| ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||| |||||||    
T  11021624 acaaattcagggattaaattgatatttcgcataattgagggacgaagttggccgacccgtgaaaattcagggacgaagttgatgattcactc 11021533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 364 - 485
Target Start/End: Complemental strand, 39681 - 39560
Alignment:
Q  364 acttggacggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaat 463  Q
    |||||||||||| ||| ||||| || |||| |||| ||||||| ||| ||| |||||||||||||||||||||||||||| |||||||||  || |||||    
T  39681 acttggacggagggacctttttaatcgacgcctgataaattcagggattaaattgatatttcgcataattgagggacgaatttggccgacccgtaaaaat 39582  T
Q  464 tcagggacgaatttgatggttc 485  Q
    |||||||| || ||||||||||    
T  39581 tcagggactaaattgatggttc 39560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 271 - 479
Target Start/End: Complemental strand, 40560441 - 40560233
Alignment:
Q  271 atcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaaggctaacagaggacttgga 370  Q
    ||||| ||||||| |  |||||||||| |||| ||| |||||||||| ||||||||||||||||||| |||| ||||  |   ||||||||    |||||    
T  40560441 atcaatttagtccttgtacacgtggctgccttgttgacacgcgtacatgacaacacagcatgcaagaggacacatcatcaccactaacagaacttttgga 40560342  T
Q  371 cggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcaggga 470  Q
    ||||| |||  ||||||||||||||||  ||||||| ||||||| | ||||||||||| |||| ||||||||| ||||| ||  | | ||||||||  ||    
T  40560341 cggagggactattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaatttggctgattttttaaaattcaaaga 40560242  T
Q  471 cgaatttga 479  Q
    |||||||||    
T  40560241 cgaatttga 40560233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 398 - 489
Target Start/End: Original strand, 28248175 - 28248266
Alignment:
Q  398 acaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatggttcactc 489  Q
    ||||||||| ||| ||| ||||||||||||||||||||||||||||||||||||||  || |||||||||||||||| |||||| |||||||    
T  28248175 acaaattcagggattaaattgatatttcgcataattgagggacgaagttggccgacccgtaaaaattcagggacgaagttgatgattcactc 28248266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 110 - 211
Target Start/End: Complemental strand, 25620049 - 25619943
Alignment:
Q  110 tggaggggtgaaaatggaggaagttttagcgagaagaagaagggtcaaggacgtttttgatgtt-----ctgaaatgtgaagaaggaggtatgggtaatg 204  Q
    ||||||||||| ||||||| |||||||| ||| ||| ||||||||||||||||||||| |||||      ||||||||||||||||||||||||||||||    
T  25620049 tggaggggtgagaatggagaaagttttatcgaaaaggagaagggtcaaggacgttttttatgtttctgagtgaaatgtgaagaaggaggtatgggtaatg 25619950  T
Q  205 caggggc 211  Q
    |||||||    
T  25619949 caggggc 25619943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 400 - 489
Target Start/End: Original strand, 41144 - 41233
Alignment:
Q  400 aaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatggttcactc 489  Q
    ||||||| ||| ||| |||||||||||||||||||||||||||| |||||||||  ||||||||||||||||||| |||||| |||||||    
T  41144 aaattcagggattaaattgatatttcgcataattgagggacgaatttggccgacccgtgaaaattcagggacgaagttgatgattcactc 41233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 398 - 489
Target Start/End: Complemental strand, 33284 - 33193
Alignment:
Q  398 acaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatggttcactc 489  Q
    ||||||||| ||| ||| |||||||||| ||||||||| |||||||||||||||||  ||||||||||||||||||| |||||| |||||||    
T  33284 acaaattcagggattaaattgatatttcacataattgaaggacgaagttggccgacccgtgaaaattcagggacgaagttgatgattcactc 33193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 271 - 479
Target Start/End: Original strand, 39664674 - 39664882
Alignment:
Q  271 atcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaaggctaacagaggacttgga 370  Q
    ||||||||||||| |  |||||||||| |||| ||| |||| ||||| |||||||||||  |||||| |||| ||||  |   ||||| |||   |||||    
T  39664674 atcaaattagtccttgtacacgtggctgccttgttgacacgtgtacatgacaacacagctagcaagaggacacatcatcaccactaacggagcttttgga 39664773  T
Q  371 cggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcaggga 470  Q
    ||||| |||  ||||||||||||||||  ||||||| ||||||| | ||||||||| | ||||  |||||||| ||||||||  | | |||||||| |||    
T  39664774 cggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgtaaaattcggggacgaatttggccgattttttaaaattcaagga 39664873  T
Q  471 cgaatttga 479  Q
    |||||||||    
T  39664874 cgaatttga 39664882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 384 - 489
Target Start/End: Complemental strand, 361550 - 361445
Alignment:
Q  384 ttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatggt 483  Q
    |||||||||||||||| ||||||| |||||| |||||||||| ||||||||||||| ||  ||||||||    |||||||||| ||||||| |||||| |    
T  361550 ttgatggacgtctgacgaattcaatgactaatttgatatttcacataattgagggatgattttggccgattcatgaaaattcaaggacgaagttgatgat 361451  T
Q  484 tcactc 489  Q
    ||||||    
T  361450 tcactc 361445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 93 - 210
Target Start/End: Complemental strand, 15372902 - 15372780
Alignment:
Q  93 ggagatgatgatgattttggaggggtgaaaatggaggaagttttagcgagaagaagaagggtcaaggacgtttttgatgtt-ctga----aatgtgaaga 187  Q
    |||||||||||||||||||||||| ||| ||||||| | ||||||||| |||| ||||| ||||| || |||||||||||| ||||    ||||||||||    
T  15372902 ggagatgatgatgattttggagggttgacaatggagaacgttttagcgggaaggagaagagtcaatgatgtttttgatgtttctgagtaaaatgtgaaga 15372803  T
Q  188 aggaggtatgggtaatgcagggg 210  Q
    |||||| ||  ||||||||||||    
T  15372802 aggaggaatatgtaatgcagggg 15372780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 271 - 452
Target Start/End: Original strand, 19908172 - 19908353
Alignment:
Q  271 atcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaaggctaacagaggacttgga 370  Q
    ||||||||||||| |  ||||||||||  ||| ||| |||| ||||| ||||||||||||||||||| ||||  |||  |   ||||| |||   |||||    
T  19908172 atcaaattagtccttgtacacgtggctgtcttgttgacacgtgtacatgacaacacagcatgcaagaggacacgtcatcaccactaacggagcttttgga 19908271  T
Q  371 cggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccga 452  Q
    ||||| |||  |||||| |||||||||  ||||||||||||||| | ||||||||||| |||| |||||| || ||||||||    
T  19908272 cggagggaccattttgacggacgtctgtaaaattcaaggactaaatagatatttcgcaaaattcagggactaatttggccga 19908353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 93 - 211
Target Start/End: Complemental strand, 41706933 - 41706819
Alignment:
Q  93 ggagatgatgatgattttggaggggtgaaaatggaggaagttttagcgagaagaagaagggtcaaggacgtttttgatgttctgaaatgtgaagaaggag 192  Q
    |||||||||||||||||||||||||||| ||||||| | ||||||||| |||| ||||| |||||||| ||||||||     | ||||||||||||||||    
T  41706933 ggagatgatgatgattttggaggggtgacaatggagaacgttttagcgggaaggagaagagtcaaggatgtttttga----gtaaaatgtgaagaaggag 41706838  T
Q  193 gtatgggtaatgcaggggc 211  Q
    | ||  | |||||||||||    
T  41706837 gaatatgaaatgcaggggc 41706819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 271 - 479
Target Start/End: Original strand, 14389010 - 14389218
Alignment:
Q  271 atcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaaggctaacagaggacttgga 370  Q
    ||||| ||||||| |  |||||||||| |||| ||| |||| ||||||||||||||| ||||||||| |||| ||||  |   |||||  |    |||||    
T  14389010 atcaagttagtccttgtacacgtggctgccttattgacacgtgtacaagacaacacaacatgcaagaggacacatcatcactactaacgaaacttttgga 14389109  T
Q  371 cggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcaggga 470  Q
    ||||| |||  ||||||||||| | ||  ||||||| ||||||| | ||||||||||| |||| ||||||||| ||||||||  | ||||||||||  ||    
T  14389110 cggagggaccattttgatggacatttggaaaattcagggactaaatagatatttcgcaaaattcagggacgaatttggccgatttttgaaaattcaatga 14389209  T
Q  471 cgaatttga 479  Q
    |||||||||    
T  14389210 cgaatttga 14389218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 398 - 489
Target Start/End: Original strand, 15373888 - 15373979
Alignment:
Q  398 acaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatggttcactc 489  Q
    ||||||||| | | ||| |||||||||||||||||||||| ||||| ||||||||| ||||| ||||||||||| || |||||| |||||||    
T  15373888 acaaattcaggaattaaattgatatttcgcataattgaggaacgaatttggccgacctgtgataattcagggactaagttgatgattcactc 15373979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 398 - 489
Target Start/End: Original strand, 41708430 - 41708521
Alignment:
Q  398 acaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatggttcactc 489  Q
    ||||||||| ||| ||| |||||||||||||||||||||||||||| |||||||||  |||| ||||||| ||| || |||||| |||||||    
T  41708430 acaaattcagggattaaattgatatttcgcataattgagggacgaatttggccgacccgtgataattcagagactaagttgatgattcactc 41708521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 366 - 479
Target Start/End: Complemental strand, 16763199 - 16763086
Alignment:
Q  366 ttggacggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattc 465  Q
    |||||||||| |||  ||||||||||||||||  ||||||| ||||||| | ||||||||||| |||| ||||||||| ||| ||||  | | |||||||    
T  16763199 ttggacggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaatttgaccgatttttaaaaattc 16763100  T
Q  466 agggacgaatttga 479  Q
    | ||||||||||||    
T  16763099 aaggacgaatttga 16763086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 271 - 479
Target Start/End: Complemental strand, 17696424 - 17696216
Alignment:
Q  271 atcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaaggctaacagaggacttgga 370  Q
    ||||| ||||||| |  |||| ||||| |||| ||| |||| ||||| ||||||||| ||||||||| |||| ||||  |   ||||| |||   |||||    
T  17696424 atcaatttagtccttgtacacatggctgccttgttgacacgtgtacaggacaacacaacatgcaagatgacacatcatcaccactaacggagcttttgga 17696325  T
Q  371 cggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcaggga 470  Q
    |||||||||  ||||||| ||||| ||  ||||||| ||||||| | |||||||  || |||| ||||| ||| ||||||||  | |||||||||| |||    
T  17696324 cggagtgaccattttgattgacgtttgtaaaattcagggactaaatagatattttccaaaattcagggatgaatttggccgatttttgaaaattcaagga 17696225  T
Q  471 cgaatttga 479  Q
    |||||||||    
T  17696224 cgaatttga 17696216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 398 - 489
Target Start/End: Original strand, 42880811 - 42880902
Alignment:
Q  398 acaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatggttcactc 489  Q
    ||||||| | ||| ||| |||||||||||||||||| ||||||||| ||| |||||  || |||||||||||||||| |||||| |||||||    
T  42880811 acaaatttatggattaaattgatatttcgcataattaagggacgaatttgaccgacccgtaaaaattcagggacgaagttgatgattcactc 42880902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 366 - 452
Target Start/End: Original strand, 24208063 - 24208149
Alignment:
Q  366 ttggacggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccga 452  Q
    |||||||||| |||   |||||||||||||||  ||||||| ||||||| ||||||||||| |||||| ||||||||| ||||||||    
T  24208063 ttggacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcgaataattcagggacgaaattggccga 24208149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 384 - 485
Target Start/End: Original strand, 11023032 - 11023132
Alignment:
Q  384 ttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatggt 483  Q
    ||||||||||||  ||||||||| ||||||  |||||||||||   ||||| |||||||| |||||||||   |||||||||||||||||| ||||||||    
T  11023032 ttgatggacgtcaaacaaattcagggactattttgatatttcgttaaattgggggacgaatttggccgac-cctgaaaattcagggacgaaattgatggt 11023130  T
Q  484 tc 485  Q
    ||    
T  11023131 tc 11023132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 271 - 479
Target Start/End: Original strand, 44709671 - 44709879
Alignment:
Q  271 atcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaaggctaacagaggacttgga 370  Q
    ||||| ||||||| |  |||||||| |  ||| ||| |||| ||||||||||||||| ||||||||| |||| ||||  |   |||||  ||   |||||    
T  44709671 atcaatttagtccttgtacacgtggatgtcttgttgacacgtgtacaagacaacacaacatgcaagaggacatatcatcaccactaacgaagcttttgga 44709770  T
Q  371 cggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcaggga 470  Q
    ||||| |||  ||||||||||||||||  ||||||| ||||||| | | ||||||||| |||| |||| |||| |||||||   | | |||||||| |||    
T  44709771 cggagggaccattttgatggacgtctgtaaaattcagggactaaatagttatttcgcaaaattcagggccgaatttggccggttttttaaaattcaagga 44709870  T
Q  471 cgaatttga 479  Q
    |||||||||    
T  44709871 cgaatttga 44709879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 400 - 479
Target Start/End: Original strand, 16764611 - 16764690
Alignment:
Q  400 aaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 479  Q
    ||||||| ||||||| ||||||||||||| |||| ||||||||| ||||||||  | | |||||||| ||||||||||||    
T  16764611 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttctcaaaattcaaggacgaatttga 16764690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 91 - 177
Target Start/End: Original strand, 4416683 - 4416769
Alignment:
Q  91 ccggagatgatgatgattttggaggggtgaaaatggaggaagttttagcgagaagaagaagggtcaaggacgtttttgatgttctga 177  Q
    |||||||||||||||||||||||| |||||| |||  | | | |||||||  ||| |||| ||||| ||||||||||||||||||||    
T  4416683 ccggagatgatgatgattttggagaggtgaagatgatgaaggatttagcggaaaggagaaaggtcagggacgtttttgatgttctga 4416769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 366 - 452
Target Start/End: Original strand, 6786002 - 6786088
Alignment:
Q  366 ttggacggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccga 452  Q
    |||||||||| |||   |||||||||||||||  ||||||| ||||||| ||||||||||  |||||| ||||||||| ||||||||    
T  6786002 ttggacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcaaataattaagggacgaaattggccga 6786088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 384 - 489
Target Start/End: Complemental strand, 28246768 - 28246663
Alignment:
Q  384 ttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatggt 483  Q
    ||||||||||||  ||||||||| | ||||  |||||||||||   ||||  |||||||| |||||||||   | |||||||||||||||| ||||||||    
T  28246768 ttgatggacgtcaaacaaattcaggaactattttgatatttcgttaaatttggggacgaatttggccgacccctaaaaattcagggacgaaattgatggt 28246669  T
Q  484 tcactc 489  Q
    ||||||    
T  28246668 tcactc 28246663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 400 - 479
Target Start/End: Complemental strand, 14387438 - 14387359
Alignment:
Q  400 aaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 479  Q
    ||||||| ||||||| ||||||||||| | |||| ||||||||| ||||||||  | | |||||||| ||||||||||||    
T  14387438 aaattcagggactaatttgatatttcgtaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttga 14387359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 384 - 489
Target Start/End: Complemental strand, 38148601 - 38148495
Alignment:
Q  384 ttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggcc-gacgtgtgaaaattcagggacgaatttgatgg 482  Q
    ||||||||||||  ||||||||| ||||||  |||||||||||   ||||| ||||| || |||||| ||  | |||||||||||||||||| |||||||    
T  38148601 ttgatggacgtcaaacaaattcagggactattttgatatttcgttaaattgggggacaaatttggcccgatctctgaaaattcagggacgaaattgatgg 38148502  T
Q  483 ttcactc 489  Q
    || ||||    
T  38148501 tttactc 38148495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 416 - 489
Target Start/End: Original strand, 37418787 - 37418860
Alignment:
Q  416 ttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatggttcactc 489  Q
    ||||||||| |||||||| | ||||||| |||||||||  ||||||||||| | ||||| |||||| |||||||    
T  37418787 ttgatattttgcataattaaaggacgaatttggccgacccgtgaaaattcaagtacgaagttgatgattcactc 37418860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 271 - 443
Target Start/End: Complemental strand, 6797725 - 6797553
Alignment:
Q  271 atcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaaggctaacagaggacttgga 370  Q
    ||||| ||||||| |  |||||||||| |||| ||| |||| ||||||||||||||| ||||||||| || | ||||  |    ||||||||   |||||    
T  6797725 atcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacatcatgcaagaggatacatcatcacccgtaacagagcttttgga 6797626  T
Q  371 cggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaa 443  Q
    |||||  ||  ||||||| ||||||||  ||||| | ||||||| | ||||||||||| |||| ||| |||||    
T  6797625 cggaggaaccattttgatagacgtctgtaaaattaagggactaaatagatatttcgcaaaattcaggaacgaa 6797553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 271 - 335
Target Start/End: Original strand, 10716809 - 10716873
Alignment:
Q  271 atcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaa 335  Q
    |||||||| |||| |  ||||||||||||||| ||| |||| ||||||||||||||| |||||||    
T  10716809 atcaaattggtccttgtacacgtggcttccttgttgacacgtgtacaagacaacacaacatgcaa 10716873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 366 - 426
Target Start/End: Original strand, 11315336 - 11315396
Alignment:
Q  366 ttggacggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcg 426  Q
    |||||||||| |||  ||||||||||||||||||||||||| | ||||  |||||||||||    
T  11315336 ttggacggagggaccattttgatggacgtctgacaaattcaggaactattttgatatttcg 11315396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 172
Target Start/End: Original strand, 11315070 - 11315149
Alignment:
Q  93 ggagatgatgatgattttggaggggtgaaaatggaggaagttttagcgagaagaagaagggtcaaggacgtttttgatgt 172  Q
    |||||||||||||||||||||| |||||| |||  | | ||||||||  |||| |||| ||||| |||||| ||||||||    
T  11315070 ggagatgatgatgattttggagaggtgaagatgatgaaggttttagcaggaaggagaaaggtcagggacgtgtttgatgt 11315149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 398 - 489
Target Start/End: Original strand, 17948927 - 17949018
Alignment:
Q  398 acaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatggttcactc 489  Q
    |||||||||||||| || ||||||||||||| ||||  |||||||  ||||| || |  || ||||||| ||||||| |||||| |||||||    
T  17948927 acaaattcaaggacgaaattgatatttcgcaaaatttggggacgattttggctgatgcttgcaaattcatggacgaagttgatgattcactc 17949018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 366 - 440
Target Start/End: Original strand, 16377218 - 16377292
Alignment:
Q  366 ttggacggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggac 440  Q
    |||||||||| |||  ||||||||||||| ||  ||||||||||||||| | ||||||| ||| |||| ||||||    
T  16377218 ttggacggagggaccattttgatggacgtatgtaaaattcaaggactaaatagatattttgcaaaattcagggac 16377292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 382 - 479
Target Start/End: Complemental strand, 2767041 - 2766944
Alignment:
Q  382 ttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 479  Q
    ||||||| ||||||||  ||||||| ||||||| | ||||||||||| |||| | ||||||  ||| ||||  | | |||||||| ||||||||||||    
T  2767041 ttttgatagacgtctgtaaaattcagggactaaatagatatttcgcaaaattcaaggacgagtttgaccgatttttaaaaattcaaggacgaatttga 2766944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 159; Significance: 3e-84; HSPs: 72)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 159; E-Value: 3e-84
Query Start/End: Original strand, 259 - 489
Target Start/End: Original strand, 42897668 - 42897898
Alignment:
Q  259 ttttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaaggctaac 358  Q
    |||||||| | |||||||||||||| | ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||| | |||||||    
T  42897668 ttttccaaataaatcaaattagtccttgaacacgtggcttccttcttgccacgtgtacaagacaacacagcatgcaggacgacagatcagcatggctaac 42897767  T
Q  359 agaggacttggacggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtg 458  Q
    |||| |||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||  ||     
T  42897768 agagcacttggacggagggacctttttgatggacgtctgacaaattcaaggactaagttgatatttcacataattgagggacgaatttggccgacccgta 42897867  T
Q  459 aaaattcagggacgaatttgatggttcactc 489  Q
    |||||||| ||||| ||||||||||||||||    
T  42897868 aaaattcaaggacggatttgatggttcactc 42897898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 156; E-Value: 2e-82
Query Start/End: Original strand, 258 - 489
Target Start/End: Complemental strand, 31821640 - 31821418
Alignment:
Q  258 attttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaaggctaa 357  Q
    ||||| |||||||||||||||||||||| |||||||||||||||||||         ||||||||||||| |||||||||||||||||||| ||||||||    
T  31821640 atttttcaattcaatcaaattagtccctgaacacgtggcttccttctt---------acaagacaacacatcatgcaagacgacagatcagcaaggctaa 31821550  T
Q  358 cagaggacttggacggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgt 457  Q
    |||||||||||||||||| ||| |||||||||||||||||| ||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  31821549 cagaggacttggacggagggacctttttgatggacgtctgataaattctgggactaagttgatatttcgcataattgagggacgaagttgaccgacgtgt 31821450  T
Q  458 gaaaattcagggacgaatttgatggttcactc 489  Q
    ||||||||||||||||||||||| ||||||||    
T  31821449 gaaaattcagggacgaatttgattgttcactc 31821418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 155; E-Value: 7e-82
Query Start/End: Original strand, 18 - 211
Target Start/End: Complemental strand, 31821881 - 31821687
Alignment:
Q  18 acttgataaacaacaggaaagatgtt-acctttaatcacaatcgaacacacaaacttcaaaaatgtcagaatcgccggagatgatgatgattttggaggg 116  Q
    |||||||||||||||||||||  ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31821881 acttgataaacaacaggaaaggcgtttacctttaatcacaaccgaacacacaaacttcaaaaatgtcagaatcgccggagatgatgatgattttggaggg 31821782  T
Q  117 gtgaaaatggaggaagttttagcgagaagaagaagggtcaaggacgtttttgatgttctgaaatgtgaagaaggaggtatgggtaatgcaggggc 211  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||||||||| ||||    
T  31821781 gtgaaaatggaggaagttttagcgataagaagaagggtcaaggacattttttatgttctgaaatgtgaagaaggatgtatgggtaatgcaagggc 31821687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 154; E-Value: 3e-81
Query Start/End: Original strand, 18 - 211
Target Start/End: Original strand, 33750036 - 33750229
Alignment:
Q  18 acttgataaacaacaggaaagatgttacctttaatcacaatcgaacacacaaacttcaaaaatgtcagaatcgccggagatgatgatgattttggagggg 117  Q
    ||||||||||||||||||||| ||||||||||||||| |   ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  33750036 acttgataaacaacaggaaaggtgttacctttaatcagagcagaacacacaaacttcaaaaatgtcagaatcatcggagatgatgatgattttggagggg 33750135  T
Q  118 tgaaaatggaggaagttttagcgagaagaagaagggtcaaggacgtttttgatgttctgaaatgtgaagaaggaggtatgggtaatgcaggggc 211  Q
    |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  33750136 tgaaaatgaaggaagttttagcgagaagaaaaagggtcaaggacgtttttgatgttcagaaatgtgaagaaggaggtatgggtaatgcaggggc 33750229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 145; E-Value: 6e-76
Query Start/End: Original strand, 252 - 452
Target Start/End: Original strand, 33750271 - 33750471
Alignment:
Q  252 ctcaacattttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaa 351  Q
    ||||||||||||||||||||||||||| |||||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||  |     
T  33750271 ctcaacattttccaattcaatcaaattcgtccctgaacacatggcttccttcttgccacgcgtacaagacaacacaacatgcaagacgacagatcaacat 33750370  T
Q  352 ggctaacagaggacttggacggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccg 451  Q
     |||||||||| |||||||||||| ||| ||||||||| | |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  33750371 cgctaacagagcacttggacggagggacctttttgatgaatgtctgacaaattcagggactaagttgatatttcgcataattgagggacgaagttggccg 33750470  T
Q  452 a 452  Q
    |    
T  33750471 a 33750471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 259 - 489
Target Start/End: Original strand, 37525917 - 37526147
Alignment:
Q  259 ttttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaaggctaac 358  Q
    |||||||||| |||||||||||||| | ||||||||||||||||||||||||| ||| ||||||||||| ||| || ||||||||||||  | | |||||    
T  37525917 ttttccaattgaatcaaattagtccttgaacacgtggcttccttcttgccacgtgtataagacaacacaacatacaggacgacagatcaacatgactaac 37526016  T
Q  359 agaggacttggacggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtg 458  Q
    || | |||||||||||| ||| ||||||||||| |||||| ||||||| |||||||||||||||||||||||||||| | | ||| ||| |||||| |||    
T  37526017 agcgcacttggacggagggacctttttgatggatgtctgaaaaattcagggactaagttgatatttcgcataattgaagaatgaatttgaccgacgcgtg 37526116  T
Q  459 aaaattcagggacgaatttgatggttcactc 489  Q
    |||||||| ||||||||||||||||||||||    
T  37526117 aaaattcaaggacgaatttgatggttcactc 37526147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 259 - 489
Target Start/End: Original strand, 33160042 - 33160272
Alignment:
Q  259 ttttccaattcaatcaaattagtccctaaacacgtg-gcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaaggctaa 357  Q
    ||||||||||||||||||||||||| | |||||||| |||| |||||||||||| ||| ||||||||||| |||||| | ||||||||||| | ||||||    
T  33160042 ttttccaattcaatcaaattagtccttgaacacgtgagctt-cttcttgccacgtgtataagacaacacaacatgcagggcgacagatcagcatggctaa 33160140  T
Q  358 cagaggacttggacggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgt 457  Q
    ||||| |||| |  |||| ||| |||||||||| |||||||||||||||  ||||||||||||||||| ||||||||||||| ||| ||||||||| |||    
T  33160141 cagagcacttaggtggagggacctttttgatgggcgtctgacaaattcagagactaagttgatatttcacataattgagggatgaatttggccgacctgt 33160240  T
Q  458 gaaaattcagggacgaatttgatggttcactc 489  Q
    ||||||||| ||||||||||||||||| ||||    
T  33160241 gaaaattcaaggacgaatttgatggtttactc 33160272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 259 - 489
Target Start/End: Complemental strand, 32822590 - 32822361
Alignment:
Q  259 ttttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaaggctaac 358  Q
    ||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||| | |||||||||| | | ||||||    
T  32822590 ttttcaaattcaatcaaattagtccctgaacacgtggcttccttcttgccacgcgtacaagacaacaaagcatgcatggcgacagatca-gcatgctaac 32822492  T
Q  359 agaggacttggacggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtg 458  Q
    | || |||||||||||  ||| |||||||||||| ||||||||||||| |||||||||||||||||   |||||||||||| ||| ||||||||    |     
T  32822491 aaagcacttggacggaaggacctttttgatggacatctgacaaattcagggactaagttgatattttaaataattgagggatgaatttggccgatccata 32822392  T
Q  459 aaaattcagggacgaatttgatggttcactc 489  Q
    |||||||| ||||||| ||||||||||||||    
T  32822391 aaaattcaaggacgaagttgatggttcactc 32822361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 259 - 489
Target Start/End: Original strand, 462266 - 462494
Alignment:
Q  259 ttttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaaggctaac 358  Q
    ||||| ||||||||||||||||||| | |||||   ||||||||||||||||| ||| |||| |||||| |||||| | ||||| ||||| | |||||||    
T  462266 ttttcaaattcaatcaaattagtccttgaacact--gcttccttcttgccacgtgtataagataacacaacatgcacggcgacaaatcagcatggctaac 462363  T
Q  359 agaggacttggacggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtg 458  Q
    |||| ||||||| |||| ||  |||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| ||| ||||||||  |||     
T  462364 agagcacttggatggagggatctttttgatggacgtttgacaaattcaaggactaagttgatatttcgcataattgacggatgaatttggccgatctgta 462463  T
Q  459 aaaattcagggacgaatttgatggttcactc 489  Q
    ||||||||  |||||||||||||||||||||    
T  462464 aaaattcaatgacgaatttgatggttcactc 462494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 259 - 489
Target Start/End: Original strand, 31201037 - 31201267
Alignment:
Q  259 ttttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaaggctaac 358  Q
    |||||||| ||||||||||| |||||| ||||| || ||||||||||||||||| |||||||||||||| |||||||| |||||  |||| | |||||||    
T  31201037 ttttccaaatcaatcaaattcgtccctgaacacatgacttccttcttgccacgcatacaagacaacacatcatgcaaggcgacatgtcagcatggctaac 31201136  T
Q  359 agaggacttggacggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtg 458  Q
     |||  | |  |||||| ||| |||||||||||||||||| ||||||| ||| ||| |||||||||||||||||||| ||||||| |||||||||  |||    
T  31201137 ggagcccgttaacggagggacctttttgatggacgtctgataaattcagggattaaattgatatttcgcataattgatggacgaatttggccgacccgtg 31201236  T
Q  459 aaaattcagggacgaatttgatggttcactc 489  Q
    ||||||||||||| || ||||||||||||||    
T  31201237 aaaattcagggactaaattgatggttcactc 31201267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 259 - 489
Target Start/End: Original strand, 38882691 - 38882921
Alignment:
Q  259 ttttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaaggctaac 358  Q
    ||||||| ||| || ||||| |||| | |||||||| ||||||| |||||||| |||||||||||||||||||||| ||||||||||||  | |||||||    
T  38882691 ttttccacttccattaaattggtccttgaacacgtgacttccttgttgccacgagtacaagacaacacagcatgcaggacgacagatcaacatggctaac 38882790  T
Q  359 agaggacttggacggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtg 458  Q
     ||| |||||||||||| ||||||||| |||||||||||||||||||| ||| ||| ||||||| ||||||| |||| ||| ||| ||| ||||   |||    
T  38882791 ggagcacttggacggagggacattttttatggacgtctgacaaattcagggattaaattgatatctcgcatagttgaaggatgaatttgaccgatccgtg 38882890  T
Q  459 aaaattcagggacgaatttgatggttcactc 489  Q
    |||||||| ||||||||||||||||||||||    
T  38882891 aaaattcaaggacgaatttgatggttcactc 38882921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 259 - 489
Target Start/End: Complemental strand, 1320847 - 1320617
Alignment:
Q  259 ttttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaaggctaac 358  Q
    |||| |||||||||||||||||||| | ||||||||||||||||||||||||| ||||||||||||| |||||||| | |||||  |||  | |||| ||    
T  1320847 tttttcaattcaatcaaattagtccttgaacacgtggcttccttcttgccacgtgtacaagacaacatagcatgcagggcgacatgtcaccatggctgac 1320748  T
Q  359 agaggacttggacggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtg 458  Q
     ||  |||||||||||  ||| || || |||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||| || ||||||  |||    
T  1320747 ggaacacttggacggaaggaccttatttatggacgtctgacaaattcagggactaagttgatattttgcataattgagggatgaatttagccgacccgtg 1320648  T
Q  459 aaaattcagggacgaatttgatggttcactc 489  Q
    |||||| | |||| |||||||||||||||||    
T  1320647 aaaatttaaggacaaatttgatggttcactc 1320617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 259 - 489
Target Start/End: Complemental strand, 8654729 - 8654500
Alignment:
Q  259 ttttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaaggctaac 358  Q
    ||||||||||||||||||||||||| | |||| |||||||||||||||||||| |||||||||||||  ||||||| | |||||  |||| | |||||||    
T  8654729 ttttccaattcaatcaaattagtccttgaacatgtggcttccttcttgccacgtgtacaagacaacattgcatgcagggcgacatgtcagcatggctaac 8654630  T
Q  359 agaggacttggacggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtg 458  Q
     ||| |||||||||||| |||  ||||||||||||||||| ||||||||| | |||  ||||||||||||||||||||| ||||| ||| |||||  ||     
T  8654629 ggagcacttggacggagggacccttttgatggacgtctgataaattcaagaattaa-atgatatttcgcataattgaggaacgaatttgaccgactcgta 8654531  T
Q  459 aaaattcagggacgaatttgatggttcactc 489  Q
    ||||||||| ||| || ||||||||||||||    
T  8654530 aaaattcagagactaaattgatggttcactc 8654500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 19 - 173
Target Start/End: Complemental strand, 8654973 - 8654820
Alignment:
Q  19 cttgataaacaacaggaaagatgttacctttaatcacaatcgaacacacaaacttcaaaaatgtcagaatcgccggagatgatgatgattttggaggggt 118  Q
    |||||||||||| | |||||  ||||||||| |||||| |||||||||  |||||||||||||||||||| || ||||||||||||||||||||||||||    
T  8654973 cttgataaacaaaatgaaaggcgttacctttgatcacagtcgaacacaggaacttcaaaaatgtcagaattgc-ggagatgatgatgattttggaggggt 8654875  T
Q  119 gaaaatggaggaagttttagcgagaagaagaagggtcaaggacgtttttgatgtt 173  Q
    || ||||||| ||||||||||| |||| ||||| ||||| || ||||||||||||    
T  8654874 gagaatggagaaagttttagcgggaaggagaagagtcaatgatgtttttgatgtt 8654820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 11 - 211
Target Start/End: Original strand, 42897412 - 42897617
Alignment:
Q  11 cacagatacttgataaacaacaggaaagatgttacctttaatcacaatcgaacacacaaacttcaaaaatgtcagaatcgccggagatgatgatgatttt 110  Q
    |||||| ||||||||||  | ||||||| |||||||||||| ||||  ||||||||  ||||||||||| || ||||||| || ||||||||||| ||||    
T  42897412 cacagaaacttgataaattagaggaaaggtgttacctttaaccacagccgaacacaacaacttcaaaaacgtgagaatcgtcgaagatgatgatggtttt 42897511  T
Q  111 ggaggggtgaaaatggaggaagttttagcgagaagaagaagggtcaaggacgtttttgatg-ttct----gaaatgtgaagaaggaggtatgggtaatgc 205  Q
    |||| ||||| ||||||| ||||||||||| |||| ||||| |||||| |||||||| ||| ||||    ||||||||| |||||| |||| ||||||||    
T  42897512 ggagtggtgagaatggagaaagttttagcgggaaggagaagagtcaagaacgttttttatgtttctgagagaaatgtgaggaaggaagtatcggtaatgc 42897611  T
Q  206 aggggc 211  Q
    ||||||    
T  42897612 aggggc 42897617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 11 - 159
Target Start/End: Original strand, 37525666 - 37525814
Alignment:
Q  11 cacagatacttgataaacaacaggaaagatgttacctttaatcacaatcgaacacacaaacttcaaaaatgtcagaatcgccggagatgatgatgatttt 110  Q
    |||||| ||||||||||| | ||||||  |||||||||||| ||||| |||||||| |||||||| | | || ||||||||| |||||||||||||||||    
T  37525666 cacagaaacttgataaactataggaaatgtgttacctttaaccacaaccgaacacaaaaacttcacagacgtgagaatcgccagagatgatgatgatttt 37525765  T
Q  111 ggaggggtgaaaatggaggaagttttagcgagaagaagaagggtcaagg 159  Q
    |||||||||| |||| || ||||||||||| |||| ||||| |||||||    
T  37525766 ggaggggtgagaatgaagaaagttttagcgggaaggagaagagtcaagg 37525814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 54 - 211
Target Start/End: Complemental strand, 32822803 - 32822641
Alignment:
Q  54 acaatcgaacacacaaacttcaaaaatgtcagaatcgccggagatgatgatgattttggaggggtgaaaatggaggaagttttagcgagaagaagaaggg 153  Q
    |||| |||| ||| |||||||||||| |||||||||| |||||||||||||||||||| || || || |||| |  ||||||||| | |||| |||||||    
T  32822803 acaaccgaatacagaaacttcaaaaacgtcagaatcgtcggagatgatgatgattttgaagaggcgagaatgaataaagttttagtgggaaggagaaggg 32822704  T
Q  154 tcaaggacgtttttgatgtt-----ctgaaatgtgaagaaggaggtatgggtaatgcaggggc 211  Q
    |||| ||||||||| || ||     ||||||||||||||||||||||||||||||| ||||||    
T  32822703 tcaatgacgttttttatttttctgactgaaatgtgaagaaggaggtatgggtaatgtaggggc 32822641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 288 - 489
Target Start/End: Complemental strand, 9184584 - 9184383
Alignment:
Q  288 acacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaaggctaacagaggacttggacggagtgacatttttga 387  Q
    |||||||| |||||| ||| |||  ||||||||||||||| |||||| | ||||||||||| |   ||||   || | |||||||||| |||  ||| ||    
T  9184584 acacgtggattccttgttgacacatgtacaagacaacacatcatgcagggcgacagatcagcagcactaatgaagcatttggacggagggaccatttcga 9184485  T
Q  388 tggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatggttcac 487  Q
    | ||||||||||||||||| ||||||| |||||||||||| || ||| | |||||| ||||||||   ||| ||||||| ||||||| |||||| |||||    
T  9184484 tcgacgtctgacaaattcagggactaatttgatatttcgcgtagttgggcgacgaatttggccgattcgtgcaaattcaaggacgaaattgatgattcac 9184385  T
Q  488 tc 489  Q
    ||    
T  9184384 tc 9184383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 398 - 481
Target Start/End: Original strand, 31823476 - 31823559
Alignment:
Q  398 acaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatg 481  Q
    ||||||| | ||| ||| ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| ||||||    
T  31823476 acaaatttagggattaaattgatatttcgcataattgagggacgaagttggccgacccgtgaaaattcagggacgaagttgatg 31823559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 398 - 489
Target Start/End: Complemental strand, 33748423 - 33748332
Alignment:
Q  398 acaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatggttcactc 489  Q
    ||||||||| | | ||| |||||||||||||||||||| |||||||||||||||||  ||||||||||||||||||| |||||| |||||||    
T  33748423 acaaattcaggaattaaattgatatttcgcataattgaaggacgaagttggccgacccgtgaaaattcagggacgaagttgatgattcactc 33748332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 384 - 489
Target Start/End: Original strand, 25373608 - 25373713
Alignment:
Q  384 ttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatggt 483  Q
    ||||| ||||||||||||||||| | | |||||||||||||||||||||||||| | ||| |||||||| | ||||||||||| ||| ||| |||||| |    
T  25373608 ttgattgacgtctgacaaattcaggaattaagttgatatttcgcataattgaggaatgaatttggccgatgcgtgaaaattcaaggatgaacttgatgat 25373707  T
Q  484 tcactc 489  Q
    ||||||    
T  25373708 tcactc 25373713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 271 - 443
Target Start/End: Original strand, 41825570 - 41825742
Alignment:
Q  271 atcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaaggctaacagaggacttgga 370  Q
    ||||||||||||| |  ||||||| || |||| ||| || | ||||| ||||||||||||||||||| |||| ||||  |   |||||||||   |||||    
T  41825570 atcaaattagtccttgtacacgtgactgccttgttgacatgtgtacaggacaacacagcatgcaagaagacacatcatcactactaacagagcttttgga 41825669  T
Q  371 cggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaa 443  Q
    |||||||||  ||||||||||||||||  ||||||| ||||||| | ||||||||||| |||| | |||||||    
T  41825670 cggagtgaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcaaggacgaa 41825742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 398 - 489
Target Start/End: Complemental strand, 40019247 - 40019156
Alignment:
Q  398 acaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatggttcactc 489  Q
    ||||||||| ||| ||| ||||||||||||||||||||||||||||||||||||||  || ||||||||  |||||| |||||| |||||||    
T  40019247 acaaattcagggattaaattgatatttcgcataattgagggacgaagttggccgacccgtaaaaattcaaagacgaagttgatgattcactc 40019156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 384 - 489
Target Start/End: Original strand, 25707287 - 25707392
Alignment:
Q  384 ttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatggt 483  Q
    ||||| ||||||| ||||||||| ||| |||||||||||||||||||||||||||| ||| |||||||| | || |||||| | ||| ||| |||||| |    
T  25707287 ttgattgacgtctcacaaattcagggattaagttgatatttcgcataattgagggatgaatttggccgatgcgtaaaaatttaaggatgaacttgatgat 25707386  T
Q  484 tcactc 489  Q
    ||||||    
T  25707387 tcactc 25707392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 366 - 479
Target Start/End: Complemental strand, 27691277 - 27691164
Alignment:
Q  366 ttggacggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattc 465  Q
    |||||||||| |||   |||||||||||||||  ||||||| ||||||| ||||||||||||| |||| ||||||||| ||||||||  | | |||||||    
T  27691277 ttggacggagggacggatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattc 27691178  T
Q  466 agggacgaatttga 479  Q
    | ||||||||||||    
T  27691177 aaggacgaatttga 27691164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 271 - 479
Target Start/End: Original strand, 8609714 - 8609921
Alignment:
Q  271 atcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaaggctaacagaggacttgga 370  Q
    ||||| ||||||| |  |||||||||| |||| | | |||| ||||||||||||||||||||||||  ||||  |||  |   ||||| |||   |||||    
T  8609714 atcaatttagtccttgtacacgtggctgccttgtcgacacgtgtacaagacaacacagcatgcaagg-gacacgtcatcaccactaacggagcttttgga 8609812  T
Q  371 cggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcaggga 470  Q
    ||||| |||  ||||||||||||||||  ||||||| ||||||| | ||||||||||| |||| ||||||||| ||||||||  | | |||||||| | |    
T  8609813 cggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaatttggccgattttttaaaattcaagaa 8609912  T
Q  471 cgaatttga 479  Q
    |||||||||    
T  8609913 cgaatttga 8609921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 271 - 479
Target Start/End: Original strand, 13108263 - 13108470
Alignment:
Q  271 atcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaaggctaacagaggacttgga 370  Q
    ||||| ||||||| |  |||||||||| |||| ||| |||| ||||||||||||||||||||||||  ||||  |||  |   |||||  ||   |||||    
T  13108263 atcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgcaagg-gacacgtcatcaccactaacgaagcttttgga 13108361  T
Q  371 cggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcaggga 470  Q
    ||||| |||  ||||||||||||||||  ||||||| ||||||| ||||||||||||| |||| ||||||| | || |||||  | | |||||||| |||    
T  13108362 cggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacgtatttagccgattttttaaaattcaagga 13108461  T
Q  471 cgaatttga 479  Q
    |||||||||    
T  13108462 cgaatttga 13108470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 398 - 474
Target Start/End: Complemental strand, 24526987 - 24526911
Alignment:
Q  398 acaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaa 474  Q
    ||||||||| ||| ||| |||||||||| |||||||||||||||||||||||||||  ||| |||||||||||||||    
T  24526987 acaaattcagggattaaattgatatttcacataattgagggacgaagttggccgacccgtgtaaattcagggacgaa 24526911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 94 - 211
Target Start/End: Original strand, 38882517 - 38882639
Alignment:
Q  94 gagatgatgatgattttggaggggtgaaaatggaggaagttttagcgagaagaagaagggtcaaggacgtttttgatgtt-----ctgaaatgtgaagaa 188  Q
    ||||||||||||||||||||| ||||||||||||| | | ||||| | |||| ||||||||||| ||||||||| |||||      ||||| |||  |||    
T  38882517 gagatgatgatgattttggagcggtgaaaatggagaaggctttagtgggaaggagaagggtcaatgacgttttttatgtttctgagtgaaaagtggggaa 38882616  T
Q  189 ggaggtatgggtaatgcaggggc 211  Q
    ||||||||||||||| |||||||    
T  38882617 ggaggtatgggtaatacaggggc 38882639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 366 - 479
Target Start/End: Complemental strand, 13282601 - 13282488
Alignment:
Q  366 ttggacggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattc 465  Q
    |||||||||| |||  ||||||||||||| ||  ||||||| ||||||| | ||||||||||| |||| ||||||||| ||||||||  | | |||||||    
T  13282601 ttggacggagggaccattttgatggacgtttgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaatttggccgattttttaaaattc 13282502  T
Q  466 agggacgaatttga 479  Q
    | ||||||||||||    
T  13282501 aaggacgaatttga 13282488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 271 - 479
Target Start/End: Complemental strand, 38547445 - 38547238
Alignment:
Q  271 atcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaaggctaacagaggacttgga 370  Q
    ||||| ||||||| |  |||||||||| |||| ||| |||| ||||||||||||||||||||||||  ||||  |||  |   ||||| |||   |||||    
T  38547445 atcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacagcatgcaagg-gacacgtcatcaccactaacggagcttttgga 38547347  T
Q  371 cggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcaggga 470  Q
     |||| |||  ||||||||||||||||  ||||||| ||||||| ||||||||||||| |||| | ||||| | ||||||||  | | |||||||| |||    
T  38547346 tggagggaccattttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcatggacgtatttggccgattttttaaaattcaagga 38547247  T
Q  471 cgaatttga 479  Q
    |||| ||||    
T  38547246 cgaacttga 38547238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 271 - 443
Target Start/End: Complemental strand, 5036667 - 5036491
Alignment:
Q  271 atcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaaggctaacagagg----act 366  Q
    ||||| ||||||| |  |||||||||| |||| ||| |||| ||||||||||||||| ||||||||| |||| ||||  |   |||||||||     | |    
T  5036667 atcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaagacaacacaacatgcaagaggacacatcatcatcactaacagagctttaatt 5036568  T
Q  367 tggacggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaa 443  Q
    ||||||||| |||  ||||||| ||||||||  ||||||||||||||| | |||||||| || |||| |||||||||    
T  5036567 tggacggagagaccattttgatagacgtctgtaaaattcaaggactaaatagatatttcacaaaattcagggacgaa 5036491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 398 - 489
Target Start/End: Complemental strand, 31199576 - 31199485
Alignment:
Q  398 acaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatggttcactc 489  Q
    ||||||||| ||| ||| |||||||||| ||||||| ||||||||| |||||||||  |||| ||||||||||| || |||||| |||||||    
T  31199576 acaaattcagggattaaattgatatttctcataattaagggacgaatttggccgacccgtgataattcagggactaagttgatgattcactc 31199485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 386 - 483
Target Start/End: Original strand, 28433737 - 28433834
Alignment:
Q  386 gatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatggt 483  Q
    ||||||||||  ||||||||| ||||||  |||||||||||   |||||||||||||| ||||||||    |||||||||||||||||| ||||||||    
T  28433737 gatggacgtcaaacaaattcagggactattttgatatttcgttaaattgagggacgaatttggccgatccttgaaaattcagggacgaaattgatggt 28433834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 93 - 211
Target Start/End: Original strand, 31200873 - 31200987
Alignment:
Q  93 ggagatgatgatgattttggaggggtgaaaatggaggaagttttagcgagaagaagaagggtcaaggacgtttttgatgttctgaaatgtgaagaaggag 192  Q
    |||||||||||||||||||||||||||| ||||||| | ||||||||| |||  ||||  |||||||| ||||||||     | ||||||||||||||||    
T  31200873 ggagatgatgatgattttggaggggtgacaatggagaacgttttagcgggaaagagaaaagtcaaggatgtttttga----gtaaaatgtgaagaaggag 31200968  T
Q  193 gtatgggtaatgcaggggc 211  Q
    | ||  |||||||| ||||    
T  31200969 gaatatgtaatgcaagggc 31200987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 299 - 479
Target Start/End: Original strand, 26242268 - 26242448
Alignment:
Q  299 ccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaaggctaacagaggacttggacggagtgacatttttgatggacgtctga 398  Q
    |||| ||| |||| ||||||||||||||| ||||||||| |||| ||||      ||||| |||   |||||||||| |||  ||||||||||||||||     
T  26242268 ccttgttgacacgtgtacaagacaacacaacatgcaagaggacacatcatcgccactaacggagcttttggacggagggaccattttgatggacgtctgt 26242367  T
Q  399 caaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 479  Q
     |||||||  |||||| | ||||||||||| |||| ||||||||| ||||| ||  | |||||||||| | ||||| ||||    
T  26242368 aaaattcagagactaaatagatatttcgcaaaatttagggacgaatttggctgatttttgaaaattcaagaacgaaattga 26242448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 398 - 481
Target Start/End: Complemental strand, 461267 - 461184
Alignment:
Q  398 acaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatg 481  Q
    ||||||||| ||| ||| ||| |||||| ||||||||||||| ||| |||||||||  ||||||||||| ||||||| ||||||    
T  461267 acaaattcagggattaaattgttatttcacataattgagggatgaatttggccgacccgtgaaaattcaaggacgaagttgatg 461184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 113 - 211
Target Start/End: Original strand, 462111 - 462214
Alignment:
Q  113 aggggtgaaaatggaggaagttttagcgagaagaagaagggtcaaggacgtttttgatgtt-----ctgaaatgtgaagaaggaggtatgggtaatgcag 207  Q
    |||||||| ||||||| ||||||||||| |||| ||||||||||| |||||| || |||||      |||| || |||||||||||||||||||| ||||    
T  462111 aggggtgagaatggagaaagttttagcgggaaggagaagggtcaatgacgttctttatgtttctgagtgaactgcgaagaaggaggtatgggtaacgcag 462210  T
Q  208 gggc 211  Q
    ||||    
T  462211 gggc 462214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 398 - 489
Target Start/End: Original strand, 32824271 - 32824362
Alignment:
Q  398 acaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatggttcactc 489  Q
    |||||||||  || ||| ||||||||||||||||||||||||| || |||||||||  ||||||||||||  || || |||||| |||||||    
T  32824271 acaaattcagtgattaaattgatatttcgcataattgagggactaatttggccgacccgtgaaaattcagaaacaaagttgatgattcactc 32824362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 87 - 172
Target Start/End: Original strand, 11721481 - 11721566
Alignment:
Q  87 atcgccggagatgatgatgattttggaggggtgaaaatggaggaagttttagcgagaagaagaagggtcaaggacgtttttgatgt 172  Q
    |||||||||||||||||||||||||||| |||||| | || | | ||||||||| |||| |||| | ||| |||||| ||||||||    
T  11721481 atcgccggagatgatgatgattttggagaggtgaagaaggtgaaggttttagcgggaaggagaaagatcagggacgtatttgatgt 11721566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 271 - 443
Target Start/End: Original strand, 9673091 - 9673263
Alignment:
Q  271 atcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaaggctaacagaggacttgga 370  Q
    ||||||||||||| |  |||||||||| |||| ||| |||| ||||| ||||||||| ||||||||| |||| ||||  |   |||||  ||   || ||    
T  9673091 atcaaattagtccttgtacacgtggctgccttgttgacacgtgtacatgacaacacaacatgcaagaagacacatcatcaccactaacgaagcttttaga 9673190  T
Q  371 cggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaa 443  Q
    ||||| |||  ||||||||||||||||  ||||||| ||| ||| | |||||||| || |||| |||||||||    
T  9673191 cggagggaccattttgatggacgtctgtaaaattcagggattaaatagatatttcacaaaattcagggacgaa 9673263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 288 - 348
Target Start/End: Original strand, 11722732 - 11722792
Alignment:
Q  288 acacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcag 348  Q
    ||||||||||||||| ||| |||| |||||| |||||||| |||||||||||||| |||||    
T  11722732 acacgtggcttccttgttgacacgtgtacaacacaacacaacatgcaagacgacatatcag 11722792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 416 - 488
Target Start/End: Complemental strand, 38881501 - 38881429
Alignment:
Q  416 ttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatggttcact 488  Q
    |||| ||||||||||||||||||| ||| ||||| ||   ||||||||||| |||||||||||||| ||||||    
T  38881501 ttgacatttcgcataattgagggatgaatttggctgattcgtgaaaattcaaggacgaatttgatgattcact 38881429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 398 - 466
Target Start/End: Complemental strand, 42894867 - 42894799
Alignment:
Q  398 acaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattca 466  Q
    ||||||||| ||| ||| |||||||||||||||||| ||||||||| |||| ||||  |||||||||||    
T  42894867 acaaattcagggattaaattgatatttcgcataattaagggacgaatttggtcgacccgtgaaaattca 42894799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 400 - 479
Target Start/End: Original strand, 601704 - 601783
Alignment:
Q  400 aaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 479  Q
    ||||||| ||||||| ||||||||||| | |||| ||||||||| ||||||||  | | |||||||| ||||||||||||    
T  601704 aaattcagggactaatttgatatttcgaaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttga 601783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 382 - 489
Target Start/End: Complemental strand, 5075475 - 5075368
Alignment:
Q  382 ttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatg 481  Q
    |||||||||||||  || |||||||||||| || ||||||||||||| ||||  |||||||  ||||| || |  || ||||||| ||||||| ||||||    
T  5075475 ttttgatggacgtgagagaaattcaaggacaaaattgatatttcgcaaaatttggggacgattttggctgatgcttgcaaattcaaggacgaagttgatg 5075376  T
Q  482 gttcactc 489  Q
     |||||||    
T  5075375 attcactc 5075368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 400 - 479
Target Start/End: Complemental strand, 26238815 - 26238736
Alignment:
Q  400 aaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 479  Q
    |||||| |||||||| | ||||||||||| |||| ||||||||| ||||| ||  | |||||||||| ||||||||||||    
T  26238815 aaattcgaggactaaatagatatttcgcaaaattcagggacgaatttggctgatttttgaaaattcaaggacgaatttga 26238736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 400 - 479
Target Start/End: Original strand, 27692837 - 27692916
Alignment:
Q  400 aaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 479  Q
    ||||||| ||||||| ||||||||| ||| |||| ||||||||| ||||||||  | | |||||||| ||||||||||||    
T  27692837 aaattcagggactaatttgatattttgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttga 27692916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 400 - 479
Target Start/End: Original strand, 29239187 - 29239266
Alignment:
Q  400 aaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 479  Q
    ||||||| ||||||| ||||||||||| | |||| ||||||||| ||||||||  | | |||||||| ||||||||||||    
T  29239187 aaattcagggactaatttgatatttcgaaaaatttagggacgaaattggccgatttttcaaaattcaaggacgaatttga 29239266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 398 - 489
Target Start/End: Complemental strand, 33368850 - 33368759
Alignment:
Q  398 acaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatggttcactc 489  Q
    ||||||||||||| ||| ||||||||||||||||||||| || ||| | | ||||   || ||||||||  ||||||||||||| |||||||    
T  33368850 acaaattcaaggattaaattgatatttcgcataattgagagatgaattcgaccgattcgtaaaaattcaaagacgaatttgatgattcactc 33368759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 400 - 479
Target Start/End: Original strand, 33762713 - 33762792
Alignment:
Q  400 aaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 479  Q
    ||||||| ||||||| ||||||||||| | |||| ||||||||| ||||||||  | | |||||||| ||||||||||||    
T  33762713 aaattcagggactaatttgatatttcgtaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttga 33762792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 408 - 479
Target Start/End: Original strand, 34681074 - 34681145
Alignment:
Q  408 ggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 479  Q
    ||||||| | ||||||||||| |||| ||||||||| ||||||||  | |||||||||| ||||||||||||    
T  34681074 ggactaaatagatatttcgcaaaattcagggacgaatttggccgatttttgaaaattcaaggacgaatttga 34681145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 400 - 479
Target Start/End: Original strand, 38548831 - 38548910
Alignment:
Q  400 aaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 479  Q
    ||||||| ||| ||| ||||||||||||| |||| ||||||||| ||||||||  | | |||||||| ||||||||||||    
T  38548831 aaattcagggattaatttgatatttcgcaaaattcagggacgaaattggccgatttttcaaaattcaaggacgaatttga 38548910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 400 - 479
Target Start/End: Original strand, 42943426 - 42943505
Alignment:
Q  400 aaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 479  Q
    ||||||| ||||||| | ||||||||||| |||| ||||||||| ||||||||  | | |||||||| ||||||||||||    
T  42943426 aaattcagggactaaatagatatttcgcaaaattcagggacgaatttggccgattttttaaaattcaaggacgaatttga 42943505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 172
Target Start/End: Complemental strand, 9184794 - 9184712
Alignment:
Q  90 gccggagatgatgatgattttggaggggtgaaaatggaggaagttttagcgagaagaagaagggtcaaggacgtttttgatgt 172  Q
    ||||||||||||||||||||||||| |||||| |||  | | ||||||||| |||| |||| | ||| |||||| ||||||||    
T  9184794 gccggagatgatgatgattttggagaggtgaagatgatgaaggttttagcgggaaggagaaagatcatggacgtatttgatgt 9184712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 400 - 478
Target Start/End: Original strand, 13283995 - 13284073
Alignment:
Q  400 aaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttg 478  Q
    ||||||| ||||||| ||||||||||||| |||| |||||| || ||||||||  | | |||||||| |||||||||||    
T  13283995 aaattcatggactaatttgatatttcgcaaaattcagggacaaaattggccgatttttcaaaattcaaggacgaatttg 13284073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 398 - 447
Target Start/End: Original strand, 1322314 - 1322363
Alignment:
Q  398 acaaattcaaggactaagttgatatttcgcataattgagggacgaagttg 447  Q
    ||||||||| ||| ||| ||||||||| ||||||||||||||||||||||    
T  1322314 acaaattcagggattaaattgatattttgcataattgagggacgaagttg 1322363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 400 - 477
Target Start/End: Complemental strand, 13106893 - 13106816
Alignment:
Q  400 aaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaattt 477  Q
    ||||||| ||||||| ||||||||||||| |||| ||||| ||| ||||||||  | | |||||||| ||||||||||    
T  13106893 aaattcagggactaatttgatatttcgcaaaattcagggatgaaattggccgatttttcaaaattcaaggacgaattt 13106816  T

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Target: chr8; HSP #59
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 366 - 443
Target Start/End: Original strand, 33708825 - 33708902
Alignment:
Q  366 ttggacggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaa 443  Q
    |||||||||| ||||  |||||||||||| ||  ||||||| ||||||| || |||||||||| |||| |||||||||    
T  33708825 ttggacggagggacagatttgatggacgtttgtaaaattcagggactaatttaatatttcgcaaaattcagggacgaa 33708902  T

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Target: chr8; HSP #60
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 384 - 489
Target Start/End: Original strand, 40020654 - 40020759
Alignment:
Q  384 ttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatggt 483  Q
    ||||||||||||  ||||||||| ||||||  |||||||||||   ||||  |||||||| ||||| |||   | || ||||||||||||| ||||||||    
T  40020654 ttgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttggggacgaatttggcagacccctaaagattcagggacgaaattgatggt 40020753  T
Q  484 tcactc 489  Q
    ||||||    
T  40020754 tcactc 40020759  T

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Target: chr8; HSP #61
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 366 - 479
Target Start/End: Complemental strand, 42941897 - 42941784
Alignment:
Q  366 ttggacggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattc 465  Q
    |||||||||| |||  ||||||||||| ||||  ||||||| ||||||| |  ||||||| || |||| ||||||||| ||||| ||  | | |||||||    
T  42941897 ttggacggagggactattttgatggacatctgtaaaattcagggactaaataaatatttctcaaaattcagggacgaatttggctgattttttaaaattc 42941798  T
Q  466 agggacgaatttga 479  Q
    | ||||||||||||    
T  42941797 aaggacgaatttga 42941784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 400 - 452
Target Start/End: Original strand, 15308261 - 15308313
Alignment:
Q  400 aaattcaaggactaagttgatatttcgcataattgagggacgaagttggccga 452  Q
    ||||||| ||||||| ||||||||||| |||||| ||||||||| ||||||||    
T  15308261 aaattcagggactaatttgatatttcgaataattcagggacgaaattggccga 15308313  T

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Target: chr8; HSP #63
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 400 - 452
Target Start/End: Original strand, 15488630 - 15488682
Alignment:
Q  400 aaattcaaggactaagttgatatttcgcataattgagggacgaagttggccga 452  Q
    ||||||| ||||||| ||||||||||| |||||| ||||||||| ||||||||    
T  15488630 aaattcagggactaatttgatatttcgaataattcagggacgaaattggccga 15488682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 175 - 211
Target Start/End: Original strand, 33159959 - 33159995
Alignment:
Q  175 tgaaatgtgaagaaggaggtatgggtaatgcaggggc 211  Q
    |||||||||||||||||||||||||| ||||||||||    
T  33159959 tgaaatgtgaagaaggaggtatgggtgatgcaggggc 33159995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 400 - 479
Target Start/End: Complemental strand, 29237240 - 29237161
Alignment:
Q  400 aaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 479  Q
    ||||||| ||||||| ||||||||||| | |||| ||||||||| ||| ||||  | | |||||||| ||||||||||||    
T  29237240 aaattcagggactaatttgatatttcgaaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttga 29237161  T

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Target: chr8; HSP #66
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 400 - 479
Target Start/End: Complemental strand, 33707295 - 33707216
Alignment:
Q  400 aaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 479  Q
    ||||||| ||||||| ||||||||||| | |||| ||||||||| ||| ||||  | | |||||||| ||||||||||||    
T  33707295 aaattcagggactaatttgatatttcgtaaaattcagggacgaaattgaccgatttttcaaaattcaaggacgaatttga 33707216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 400 - 479
Target Start/End: Complemental strand, 33761158 - 33761079
Alignment:
Q  400 aaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 479  Q
    ||||||| ||||||| ||||||||||||| |||| ||||||||| ||||| ||  | | ||||||||  |||||||||||    
T  33761158 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattggctgatttttcaaaattcaaagacgaatttga 33761079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 400 - 479
Target Start/End: Complemental strand, 35509303 - 35509224
Alignment:
Q  400 aaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 479  Q
    ||||||| ||||||| ||||||||||||| |||| ||||||||| ||| ||||  | | |||||||| |||| |||||||    
T  35509303 aaattcagggactaatttgatatttcgcaaaattcagggacgaaattgaccgatttttcaaaattcaaggactaatttga 35509224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 366 - 440
Target Start/End: Complemental strand, 15305920 - 15305846
Alignment:
Q  366 ttggacggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggac 440  Q
    |||||||||| |||   |||||||||||||||  ||||||| ||||||| ||||||||||  |||||| ||||||    
T  15305920 ttggacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcaaataattcagggac 15305846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 366 - 440
Target Start/End: Complemental strand, 15486289 - 15486215
Alignment:
Q  366 ttggacggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggac 440  Q
    |||||||||| |||   |||||||||||||||  ||||||| ||||||| ||||||||||  |||||| ||||||    
T  15486289 ttggacggagggactgatttgatggacgtctgtaaaattcagggactaatttgatatttcaaataattcagggac 15486215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 398 - 480
Target Start/End: Original strand, 23811565 - 23811647
Alignment:
Q  398 acaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgat 480  Q
    ||||||||||||||||  ||||||||| | | ||||| |||||||| ||||||||   |||  |||||||||||||| |||||    
T  23811565 acaaattcaaggactattttgatattttgtaaaattgggggacgaatttggccgatccgtgcgaattcagggacgaagttgat 23811647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 398 - 435
Target Start/End: Complemental strand, 33158747 - 33158710
Alignment:
Q  398 acaaattcaaggactaagttgatatttcgcataattga 435  Q
    ||||||||||||| ||| ||||||||||||||||||||    
T  33158747 acaaattcaaggattaaattgatatttcgcataattga 33158710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 140; Significance: 6e-73; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 140; E-Value: 6e-73
Query Start/End: Original strand, 271 - 474
Target Start/End: Original strand, 3018338 - 3018541
Alignment:
Q  271 atcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaaggctaacagaggacttgga 370  Q
    |||||||| |||||| |||| ||||||||| |||||||||||||||||||||||||| |||||||||||| ||||||  | ||||||| ||| |||||||    
T  3018338 atcaaattcgtccctgaacatgtggcttccgtcttgccacgcgtacaagacaacacatcatgcaagacgatagatcaacatggctaacggagcacttgga 3018437  T
Q  371 cggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcaggga 470  Q
     |||| ||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  3018438 tggagggacctttttgatggacgtctgacaaattcagggactaagttgatatttcgcataattgagggacgaagttggccgacgcgtgaaaattcaggga 3018537  T
Q  471 cgaa 474  Q
    ||||    
T  3018538 cgaa 3018541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 135; E-Value: 6e-70
Query Start/End: Original strand, 259 - 489
Target Start/End: Complemental strand, 29077558 - 29077328
Alignment:
Q  259 ttttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaaggctaac 358  Q
    |||||||| ||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||  |||| | |||||||    
T  29077558 ttttccaaatcaatcaaattcgtccctgaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaaggcgacatgtcagcatggctaac 29077459  T
Q  359 agaggacttggacggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtg 458  Q
     |||  | |  |||||| ||| |||||||||||||||||||||||||| |||  || |||| |||||||||||||||||||| || |||||||||| |||    
T  29077458 ggagcccgttaacggagggacctttttgatggacgtctgacaaattcagggatgaaattgaaatttcgcataattgagggactaatttggccgacgcgtg 29077359  T
Q  459 aaaattcagggacgaatttgatggttcactc 489  Q
    |||||||||||||||||||||||||||||||    
T  29077358 aaaattcagggacgaatttgatggttcactc 29077328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 259 - 489
Target Start/End: Complemental strand, 29112530 - 29112300
Alignment:
Q  259 ttttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaaggctaac 358  Q
    |||||||| ||||||||||| |||||| ||||||||||||||||||||||||||||||| |||| |||||||||| || |||||  |||| | |||||||    
T  29112530 ttttccaaatcaatcaaattcgtccctgaacacgtggcttccttcttgccacgcgtacaggacagcacagcatgccaggcgacatgtcagcatggctaac 29112431  T
Q  359 agaggacttggacggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtg 458  Q
     |||  | |  |||||| ||| |||||||||||||||||||||||||| |||  || |||| |||||||||||||||||||| || |||||||||| |||    
T  29112430 ggagcccgttaacggagggacctttttgatggacgtctgacaaattcagggatgaaattgaaatttcgcataattgagggactaatttggccgacgcgtg 29112331  T
Q  459 aaaattcagggacgaatttgatggttcactc 489  Q
    ||||||||||||| || ||||||||||||||    
T  29112330 aaaattcagggactaacttgatggttcactc 29112300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 259 - 489
Target Start/End: Complemental strand, 4641585 - 4641355
Alignment:
Q  259 ttttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaaggctaac 358  Q
    |||||||| ||||||||||| |||||| |||||||||||||||||||||||||||||||||||| |||||||||||||   |||  |||| | |||||||    
T  4641585 ttttccaaatcaatcaaattcgtccctgaacacgtggcttccttcttgccacgcgtacaagacagcacagcatgcaaggaaacatgtcagcatggctaac 4641486  T
Q  359 agaggacttggacggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtg 458  Q
     |||  | |  |||||| ||| ||||||||||| |||||| ||||||| ||| ||| |||||||||| ||||||||||||||||| |||||||||  |||    
T  4641485 ggagcccgttaacggagggacctttttgatggaggtctgataaattcagggattaaattgatatttcacataattgagggacgaatttggccgacccgtg 4641386  T
Q  459 aaaattcagggacgaatttgatggttcactc 489  Q
    ||||||||||||| || ||||||||||||||    
T  4641385 aaaattcagggactaaattgatggttcactc 4641355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 255 - 489
Target Start/End: Complemental strand, 2968373 - 2968139
Alignment:
Q  255 aacattttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaaggc 354  Q
    |||||||||||| ||||||||||| ||| || |||||||||||||||||||||||||||||||||||| |||| |||||||| |||||  |||| | |||    
T  2968373 aacattttccaaatcaatcaaattcgtctctgaacacgtggcttccttcttgccacgcgtacaagacagcacaacatgcaaggcgacatgtcagcacggc 2968274  T
Q  355 taacagaggacttggacggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacg 454  Q
    |||| |||  | |  |||||  ||| |||||||||||||||||| ||||||| ||| ||| |||||||||||||||||||||||||||| ||||  |||     
T  2968273 taacggagcccgttaacggatggacctttttgatggacgtctgataaattcagggattaaattgatatttcgcataattgagggacgaatttgggagacc 2968174  T
Q  455 tgtgaaaattcagggacgaatttgatggttcactc 489  Q
     ||||||||| |||||| || ||||||||||||||    
T  2968173 cgtgaaaattgagggactaaattgatggttcactc 2968139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 19 - 173
Target Start/End: Complemental strand, 29077805 - 29077651
Alignment:
Q  19 cttgataaacaacaggaaagatgttacctttaatcacaatcgaacacacaaacttcaaaaatgtcagaatcgccggagatgatgatgattttggaggggt 118  Q
    |||||||||||  ||||||| |||||||||| |||||  |||||||||  ||||||||| | | ||||||||  ||||||||||||||||||||||||||    
T  29077805 cttgataaacacaaggaaaggtgttacctttgatcacggtcgaacacaggaacttcaaacacgccagaatcgatggagatgatgatgattttggaggggt 29077706  T
Q  119 gaaaatggaggaagttttagcgagaagaagaagggtcaaggacgtttttgatgtt 173  Q
    |||||||||| | ||||||||| |||| ||||| |||||||| ||||||||||||    
T  29077705 gaaaatggagaacgttttagcgggaaggagaagagtcaaggatgtttttgatgtt 29077651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 19 - 173
Target Start/End: Complemental strand, 29112777 - 29112623
Alignment:
Q  19 cttgataaacaacaggaaagatgttacctttaatcacaatcgaacacacaaacttcaaaaatgtcagaatcgccggagatgatgatgattttggaggggt 118  Q
    |||||||||||  ||||||| |||||||||| |||||  |||||||||  ||||||||| | | ||||||||  ||||||||||||||||||||||||||    
T  29112777 cttgataaacacaaggaaaggtgttacctttgatcacggtcgaacacaggaacttcaaacacgccagaatcgatggagatgatgatgattttggaggggt 29112678  T
Q  119 gaaaatggaggaagttttagcgagaagaagaagggtcaaggacgtttttgatgtt 173  Q
    || ||||||| | ||||||||| |||| ||||| |||||||| ||||||||||||    
T  29112677 gacaatggagaacgttttagcgggaaggagaagagtcaaggatgtttttgatgtt 29112623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 398 - 489
Target Start/End: Complemental strand, 17950652 - 17950561
Alignment:
Q  398 acaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatggttcactc 489  Q
    ||||||||| ||| ||| ||||||||||||||||||||||||||||||||||||||  || |||||||||||| ||| ||||||||||||||    
T  17950652 acaaattcagggattaaattgatatttcgcataattgagggacgaagttggccgacccgtaaaaattcagggatgaaattgatggttcactc 17950561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 430 - 489
Target Start/End: Original strand, 3018528 - 3018587
Alignment:
Q  430 aattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatggttcactc 489  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  3018528 aattcagggacgaagttggccgacgcgtgaaaattcagggacgaatttgatggttcactc 3018587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 83 - 210
Target Start/End: Complemental strand, 4641768 - 4641636
Alignment:
Q  83 cagaatcgccggagatgatgatgattttggaggggtgaaaatggaggaagttttagcgagaagaagaagggtcaaggacgtttttgatgtt-ctga---- 177  Q
    ||||||||  ||||||||||||||||||||||||| || ||||||| | ||||||||| |||| ||||| ||||| || |||||||||||| ||||        
T  4641768 cagaatcgatggagatgatgatgattttggaggggcgacaatggagaacgttttagcgggaaggagaagagtcaaagatgtttttgatgtttctgagtaa 4641669  T
Q  178 aatgtgaagaaggaggtatgggtaatgcagggg 210  Q
    |||||||||||||||| ||  ||||||||||||    
T  4641668 aatgtgaagaaggaggaatatgtaatgcagggg 4641636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 271 - 481
Target Start/End: Complemental strand, 20523584 - 20523374
Alignment:
Q  271 atcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaaggctaacagaggacttgga 370  Q
    ||||| ||||||| |  |||||||||| |||| ||| |||| ||||| |||||||| |||||||||| |||| ||||  |   ||||||||    |||||    
T  20523584 atcaatttagtccttgtacacgtggctgccttgttgacacgtgtacaggacaacacggcatgcaagaagacacatcatcaccactaacagaacttttgga 20523485  T
Q  371 cggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcaggga 470  Q
    ||||| |||  ||||||||||||||||  ||||||| ||||||| | ||||||||||| |||| | ||||||| ||| ||||  | |||||||||  |||    
T  20523484 cggagggaccattttgatggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcaaggacgaatttgaccgatttttgaaaattctagga 20523385  T
Q  471 cgaatttgatg 481  Q
     ||||||||||    
T  20523384 agaatttgatg 20523374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 68 - 173
Target Start/End: Original strand, 30641032 - 30641134
Alignment:
Q  68 aaacttcaaaaatgtcagaatcgccggagatgatgatgattttggaggggtgaaaatggaggaagttttagcgagaagaagaagggtcaaggacgttttt 167  Q
    |||||||||||| ||||||||| | | ||||||||||||||||||||||| || || |||  ||||||||| | |||| |||||||||||||||||||||    
T  30641032 aaacttcaaaaacgtcagaatctcag-agatgatgatgattttggaggggcgagaacgga--aagttttagtgggaaggagaagggtcaaggacgttttt 30641128  T
Q  168 gatgtt 173  Q
    ||||||    
T  30641129 gatgtt 30641134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 398 - 489
Target Start/End: Original strand, 29114776 - 29114867
Alignment:
Q  398 acaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatggttcactc 489  Q
    ||||||||| |||  || |||| ||||||||||||||| |||| || |||||||||| |||||||||||||||| || ||||||||||||||    
T  29114776 acaaattcagggatgaaattgaaatttcgcataattgaaggactaatttggccgacgcgtgaaaattcagggactaacttgatggttcactc 29114867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 398 - 489
Target Start/End: Complemental strand, 30639702 - 30639611
Alignment:
Q  398 acaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatggttcactc 489  Q
    |||||||||  || ||| ||||||||| ||||||||||||||| || |||||||||  ||||||||||||||||||| |||||| |||||||    
T  30639702 acaaattcatagattaaattgatattttgcataattgagggactaatttggccgacccgtgaaaattcagggacgaagttgatgattcactc 30639611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 93 - 211
Target Start/End: Complemental strand, 2968528 - 2968405
Alignment:
Q  93 ggagatgatgatgattttggaggggtgaaaatggaggaagttttagcgagaagaagaagggtcaaggacgtttttga-tgttctg----aaatgtgaaga 187  Q
    |||||||||||||||||||||||||||| ||||||| | ||||||||| |||| ||||| ||||| || |||||||| | |||||    |||||||||||    
T  2968528 ggagatgatgatgattttggaggggtgacaatggagaacgttttagcgggaaggagaagagtcaatgatgtttttgatttttctgagtaaaatgtgaaga 2968429  T
Q  188 aggaggtatgggtaatgcaggggc 211  Q
    |||| | ||  |||||||||||||    
T  2968428 aggatgaatatgtaatgcaggggc 2968405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 384 - 489
Target Start/End: Original strand, 17952061 - 17952166
Alignment:
Q  384 ttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatggt 483  Q
    ||||||||||||  ||||||||| ||||||  |||||||||||   ||||  |||||||| |||||||||   |||||||||||||||||| ||||||||    
T  17952061 ttgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttggggacgaatttggccgacccctgaaaattcagggacgaaattgatggt 17952160  T
Q  484 tcactc 489  Q
    ||||||    
T  17952161 tcactc 17952166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 366 - 477
Target Start/End: Original strand, 13613583 - 13613694
Alignment:
Q  366 ttggacggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattc 465  Q
    |||||||||| |||   |||||||||||||||  ||||||| ||||||| ||||||||||||| |||| ||||||||| ||| ||||  | | |||||||    
T  13613583 ttggacggagggactaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacgaatttgaccgatttttcaaaattc 13613682  T
Q  466 agggacgaattt 477  Q
    | ||||||||||    
T  13613683 aaggacgaattt 13613694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 416 - 489
Target Start/End: Complemental strand, 35174464 - 35174391
Alignment:
Q  416 ttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatggttcactc 489  Q
    ||||||||||| |||||||||  |||||||||||||||  || |||||||||||||||| |||||| |||||||    
T  35174464 ttgatatttcgtataattgagaaacgaagttggccgacccgtaaaaattcagggacgaagttgatgattcactc 35174391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 288 - 452
Target Start/End: Original strand, 32439015 - 32439178
Alignment:
Q  288 acacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaaggctaacagaggacttggacggagtgacatttttga 387  Q
    |||||||||| |||| ||| |||| ||||||||||||||| ||||||||  ||||  |||  |   ||||||||    |||||||||| |||  ||||||    
T  32439015 acacgtggctgccttgttgacacgtgtacaagacaacacatcatgcaagg-gacacgtcatcactactaacagatcttttggacggagggaccattttga 32439113  T
Q  388 tggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccga 452  Q
    ||||||||||  ||||||| ||||||| | ||||||||||| |||| ||||||||| ||| ||||    
T  32439114 tggacgtctgtaaaattcagggactaaatagatatttcgcaaaattcagggacgaatttgaccga 32439178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 90 - 177
Target Start/End: Original strand, 25171826 - 25171913
Alignment:
Q  90 gccggagatgatgatgattttggaggggtgaaaatggaggaagttttagcgagaagaagaagggtcaaggacgtttttgatgttctga 177  Q
    |||||||||||| |||||||||||| |||||| |||  | | ||||||||| |||| |||| ||||| |||||||||||| |||||||    
T  25171826 gccggagatgataatgattttggagaggtgaagatgatgaaggttttagcgggaaggagaaaggtcagggacgtttttgaggttctga 25171913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 366 - 452
Target Start/End: Complemental strand, 3456871 - 3456785
Alignment:
Q  366 ttggacggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccga 452  Q
    |||||||||| |||   |||||||||||||||  ||||||| ||||||| ||||||||||| | |||| ||||||||| ||||||||    
T  3456871 ttggacggagggactgatttgatggacgtctgcaaaattcagggactaatttgatatttcgaaaaattcagggacgaaattggccga 3456785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 271 - 481
Target Start/End: Complemental strand, 10568617 - 10568407
Alignment:
Q  271 atcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaaggctaacagaggacttgga 370  Q
    ||||||||||||| |  ||| |||||| |||| ||| |||| ||||| ||||||||| ||||||| | |||| ||||  |   ||||| |||   |||||    
T  10568617 atcaaattagtccttgtacatgtggctgccttgttgacacgtgtacatgacaacacaacatgcaaaaggacacatcatcaccactaacggagcttttgga 10568518  T
Q  371 cggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcaggga 470  Q
    ||||| |||  ||||||| ||||||||  ||||||| ||||||| |  |||||||||  |||| | ||||||| ||| | ||  | |||||||||| |||    
T  10568517 cggagggactattttgatagacgtctgtaaaattcagggactaaataaatatttcgctaaattcaaggacgaatttgactgatttttgaaaattcaagga 10568418  T
Q  471 cgaatttgatg 481  Q
    |||||||||||    
T  10568417 cgaatttgatg 10568407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 377 - 489
Target Start/End: Complemental strand, 24662592 - 24662480
Alignment:
Q  377 gacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatt 476  Q
    ||||||||| |||||||||||||||||||| ||||||  |||||||||||   ||||| |||||||| ||| |  |   ||| ||||||| ||||||| |    
T  24662592 gacattttttatggacgtctgacaaattcatggactattttgatatttcgttaaattgggggacgaatttgacatattcgtgcaaattcaaggacgaagt 24662493  T
Q  477 tgatggttcactc 489  Q
    ||||| |||||||    
T  24662492 tgatgattcactc 24662480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 400 - 479
Target Start/End: Original strand, 32518497 - 32518576
Alignment:
Q  400 aaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 479  Q
    ||||||| ||||||| ||||||||||||| |||| ||||| ||| ||||||||  | | |||||||| ||||||||||||    
T  32518497 aaattcagggactaatttgatatttcgcaaaattcagggatgaaattggccgatttttcaaaattcaaggacgaatttga 32518576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 366 - 479
Target Start/End: Complemental strand, 32517000 - 32516887
Alignment:
Q  366 ttggacggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattc 465  Q
    |||||||||| |||| ||||||||||||| ||  |||||||||| |||| | | ||||| | | |||| ||||||||| ||| ||||  | | |||||||    
T  32517000 ttggacggagggacaattttgatggacgtatgtaaaattcaagggctaaataggtattttgtaaaattcagggacgaatttgaccgattttttaaaattc 32516901  T
Q  466 agggacgaatttga 479  Q
    | ||||||||||||    
T  32516900 aaggacgaatttga 32516887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 384 - 489
Target Start/End: Original strand, 35175882 - 35175987
Alignment:
Q  384 ttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatggt 483  Q
    ||||||||||||  ||||||||| ||||||  |||||||||||   ||||  | |||||| ||||||||    |||||||||| ||||||| ||||||||    
T  35175882 ttgatggacgtcaaacaaattcagggactattttgatatttcgttaaatttggagacgaatttggccgatccctgaaaattcaaggacgaaattgatggt 35175981  T
Q  484 tcactc 489  Q
    ||||||    
T  35175982 tcactc 35175987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 271 - 479
Target Start/End: Complemental strand, 6899703 - 6899495
Alignment:
Q  271 atcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaaggctaacagaggacttgga 370  Q
    ||||||||||||| |  |||||||| | |||| ||| |||| ||||| || |||||| ||||||||| |||| ||||  ||  ||||| |||   |||||    
T  6899703 atcaaattagtccttgtacacgtggttgccttgttgacacgtgtacatgataacacaacatgcaagaggacacatcatcaacactaacggagcttttgga 6899604  T
Q  371 cggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcaggga 470  Q
    || || |||  |||||||||| |||||  ||||| | ||||||| | |||||||| || |||| || |||||| ||| | ||  | |||||||||| |||    
T  6899603 cgaagggaccattttgatggatgtctgtaaaatttagggactaaatagatatttcacaaaatttagagacgaatttgactgatttttgaaaattcaagga 6899504  T
Q  471 cgaatttga 479  Q
    | |||||||    
T  6899503 caaatttga 6899495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 398 - 489
Target Start/End: Original strand, 4646216 - 4646307
Alignment:
Q  398 acaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttgatggttcactc 489  Q
    ||||||| | ||| ||| |||||||||||||||||||| ||||||| ||  ||||   || ||||||||||||  || ||||||||||||||    
T  4646216 acaaatttagggattaaattgatatttcgcataattgatggacgaatttaaccgatccgtaaaaattcagggattaagttgatggttcactc 4646307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 271 - 342
Target Start/End: Complemental strand, 11355440 - 11355369
Alignment:
Q  271 atcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgaca 342  Q
    ||||||||||||| |  |||||||||| |||| ||| |||| ||||| ||||||||| ||||||||| ||||    
T  11355440 atcaaattagtccttgtacacgtggctgccttgttgacacgtgtacatgacaacacaacatgcaagaggaca 11355369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 366 - 452
Target Start/End: Original strand, 32455892 - 32455978
Alignment:
Q  366 ttggacggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccga 452  Q
    |||||||||| |||   |||||||||||||||  |||||||  |||||| ||||||||||| | |||| ||||||||| ||| ||||    
T  32455892 ttggacggagggactgatttgatggacgtctgcaaaattcagtgactaatttgatatttcgaaaaattcagggacgaaattgaccga 32455978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 366 - 443
Target Start/End: Original strand, 7372959 - 7373036
Alignment:
Q  366 ttggacggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaa 443  Q
    |||||||||| |||  |||||||||||| |||  ||||||| ||||||| |  |||||||||| |||| |||||||||    
T  7372959 ttggacggagggaccattttgatggacgcctgtaaaattcagggactaaataaatatttcgcaaaattcagggacgaa 7373036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0477 (Bit Score: 115; Significance: 5e-58; HSPs: 1)
Name: scaffold0477
Description:

Target: scaffold0477; HSP #1
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 259 - 489
Target Start/End: Original strand, 6528 - 6758
Alignment:
Q  259 ttttccaattcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaaggctaac 358  Q
    |||||||| ||||||||||| |||||| |||||||||||||||||||||||||||||||||||| |||||||||||||  ||||  |||| | |||||||    
T  6528 ttttccaaatcaatcaaattcgtccctgaacacgtggcttccttcttgccacgcgtacaagacagcacagcatgcaaggtgacatgtcagcatggctaac 6627  T
Q  359 agaggacttggacggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtg 458  Q
     |||  | |  |||||| ||| ||||||||||| |||||| ||||||| ||| ||| |||||||||| ||||||||||||||||| |||||||||  |||    
T  6628 ggagcccgttaacggagggacctttttgatggaggtctgataaattcagggattaaattgatatttcacataattgagggacgaatttggccgacccgtg 6727  T
Q  459 aaaattcagggacgaatttgatggttcactc 489  Q
    ||||||||||||| || ||||||||||||||    
T  6728 aaaattcagggactaaattgatggttcactc 6758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 46; Significance: 7e-17; HSPs: 3)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 366 - 479
Target Start/End: Complemental strand, 3417 - 3304
Alignment:
Q  366 ttggacggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattc 465  Q
    |||||||||| |||   |||||||||||||||  ||||||| ||||||| ||||||||||||| |||| |||||| || ||||||||  | | |||||||    
T  3417 ttggacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacaaaattggccgatttttcaaaattc 3318  T
Q  466 agggacgaatttga 479  Q
    | ||||||||||||    
T  3317 aaggacgaatttga 3304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 366 - 479
Target Start/End: Complemental strand, 4589 - 4476
Alignment:
Q  366 ttggacggagtgacatttttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattc 465  Q
    |||||||||| |||   |||||||||||||||  ||||||| ||||||| ||||||||||||| |||| |||||| || ||||||||  | | |||||||    
T  4589 ttggacggagggacgaatttgatggacgtctgtaaaattcagggactaatttgatatttcgcaaaattcagggacaaaattggccgatttttcaaaattc 4490  T
Q  466 agggacgaatttga 479  Q
    | ||||||||||||    
T  4489 aaggacgaatttga 4476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #3
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 400 - 479
Target Start/End: Original strand, 14343 - 14422
Alignment:
Q  400 aaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattcagggacgaatttga 479  Q
    ||||||| ||||||| ||||||||||||| |||| ||||||||| || |||||  | | |||||||| ||||||||||||    
T  14343 aaattcagggactaatttgatatttcgcaaaattcagggacgaaatttgccgatttttcaaaattcaaggacgaatttga 14422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1041 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold1041
Description:

Target: scaffold1041; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 384 - 466
Target Start/End: Complemental strand, 2203 - 2121
Alignment:
Q  384 ttgatggacgtctgacaaattcaaggactaagttgatatttcgcataattgagggacgaagttggccgacgtgtgaaaattca 466  Q
    ||||| ||||||||||||||| | ||| |||||||||||||||||||||||||||| ||| |||| ||| | || ||||||||    
T  2203 ttgattgacgtctgacaaatttagggattaagttgatatttcgcataattgagggatgaatttggtcgatgcgtaaaaattca 2121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 267 - 394
Target Start/End: Complemental strand, 4681 - 4554
Alignment:
Q  267 ttcaatcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaagacgacagatcaggaaggctaacagaggact 366  Q
    |||||||||||| |||| |  ||||||||||||||| | | |||| |||||||||||||   |||||| |||||||  |||| ||  ||||||||  | |    
T  4681 ttcaatcaaattggtccttgtacacgtggcttccttgtagacacgtgtacaagacaacaagccatgcaggacgacaactcagcaacactaacagaacatt 4582  T
Q  367 tggacggagtgacatttttgatggacgt 394  Q
    ||||||||  |||  |||||||||||||    
T  4581 tggacggaaggactattttgatggacgt 4554  T

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Target: scaffold1454 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold1454
Description:

Target: scaffold1454; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 271 - 336
Target Start/End: Complemental strand, 1480 - 1415
Alignment:
Q  271 atcaaattagtccctaaacacgtggcttccttcttgccacgcgtacaagacaacacagcatgcaag 336  Q
    ||||| ||||||| |  |||||||| | |||| ||| |||| ||||||||||||||||||||||||    
T  1480 atcaatttagtccttgtacacgtggttgccttgttgacacgtgtacaagacaacacagcatgcaag 1415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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