View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3396_low_2 (Length: 502)

Name: NF3396_low_2
Description: NF3396
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3396_low_2
NF3396_low_2
[»] scaffold0169 (1 HSPs)
scaffold0169 (136-273)||(4078-4212)
[»] chr1 (43 HSPs)
chr1 (133-273)||(31166313-31166450)
chr1 (133-239)||(52135558-52135660)
chr1 (133-273)||(8224771-8224908)
chr1 (133-273)||(37036882-37037019)
chr1 (133-273)||(946379-946514)
chr1 (133-190)||(39887210-39887267)
chr1 (133-239)||(41822476-41822578)
chr1 (133-190)||(41822630-41822687)
chr1 (133-285)||(10166490-10166638)
chr1 (133-273)||(49659220-49659356)
chr1 (133-244)||(15467896-15468003)
chr1 (133-244)||(47820246-47820353)
chr1 (133-190)||(13181671-13181728)
chr1 (133-190)||(32287865-32287922)
chr1 (133-190)||(35491240-35491297)
chr1 (133-190)||(37447292-37447349)
chr1 (133-190)||(37447835-37447892)
chr1 (133-190)||(48953651-48953708)
chr1 (136-273)||(51847855-51847988)
chr1 (133-259)||(37448334-37448456)
chr1 (133-258)||(44570697-44570818)
chr1 (133-189)||(49216271-49216327)
chr1 (136-236)||(50471791-50471887)
chr1 (133-190)||(28632519-28632576)
chr1 (133-190)||(41823093-41823150)
chr1 (133-190)||(44571284-44571341)
chr1 (213-273)||(38277510-38277570)
chr1 (133-187)||(32128116-32128170)
chr1 (133-190)||(946996-947053)
chr1 (149-259)||(6470635-6470741)
chr1 (133-190)||(21267744-21267800)
chr1 (217-273)||(26501092-26501149)
chr1 (213-273)||(50005174-50005235)
chr1 (213-276)||(45565394-45565458)
chr1 (139-190)||(32647384-32647435)
chr1 (220-273)||(15034662-15034716)
chr1 (213-282)||(32287942-32288012)
chr1 (213-259)||(40264125-40264171)
chr1 (133-174)||(34003560-34003601)
chr1 (217-273)||(47165225-47165282)
chr1 (28-60)||(20712181-20712213)
chr1 (28-60)||(36668614-36668646)
chr1 (28-60)||(42162018-42162050)
[»] chr7 (45 HSPs)
chr7 (133-259)||(25189145-25189267)
chr7 (133-272)||(23455166-23455302)
chr7 (133-239)||(32650611-32650713)
chr7 (133-259)||(39342561-39342683)
chr7 (133-273)||(9784850-9784987)
chr7 (136-259)||(28539090-28539209)
chr7 (133-190)||(13814913-13814970)
chr7 (133-259)||(14603181-14603303)
chr7 (133-190)||(40495313-40495370)
chr7 (133-190)||(41443019-41443076)
chr7 (133-190)||(45984423-45984480)
chr7 (133-190)||(45988783-45988840)
chr7 (133-273)||(23548530-23548667)
chr7 (133-257)||(30524275-30524395)
chr7 (136-259)||(35455822-35455941)
chr7 (133-190)||(26416036-26416093)
chr7 (133-259)||(30629075-30629197)
chr7 (133-190)||(33310887-33310944)
chr7 (133-239)||(40495755-40495857)
chr7 (133-190)||(40667424-40667481)
chr7 (133-258)||(3905578-3905699)
chr7 (133-257)||(22391507-22391626)
chr7 (135-190)||(36328717-36328772)
chr7 (136-190)||(30080723-30080777)
chr7 (133-244)||(43791123-43791230)
chr7 (133-239)||(14790151-14790253)
chr7 (133-190)||(30587822-30587879)
chr7 (133-190)||(42816632-42816689)
chr7 (133-188)||(19865473-19865528)
chr7 (217-273)||(6498764-6498821)
chr7 (133-170)||(18926740-18926777)
chr7 (213-273)||(29065914-29065975)
chr7 (217-284)||(35776954-35777022)
chr7 (28-60)||(38235878-38235910)
chr7 (220-259)||(2057413-2057452)
chr7 (137-172)||(15990992-15991027)
chr7 (132-171)||(18938930-18938969)
chr7 (213-259)||(5644772-5644818)
chr7 (220-260)||(5644694-5644734)
chr7 (157-273)||(18789189-18789302)
chr7 (28-60)||(36747379-36747411)
chr7 (28-60)||(40264226-40264258)
chr7 (28-60)||(42620317-42620349)
chr7 (28-60)||(43778540-43778572)
chr7 (28-60)||(44720165-44720197)
[»] chr4 (38 HSPs)
chr4 (132-258)||(42776656-42776778)
chr4 (133-244)||(29091170-29091277)
chr4 (133-257)||(35470142-35470262)
chr4 (133-239)||(53760723-53760825)
chr4 (133-259)||(2125875-2125997)
chr4 (133-282)||(10354336-10354482)
chr4 (136-273)||(41139478-41139610)
chr4 (160-260)||(1539658-1539754)
chr4 (137-239)||(56339171-56339269)
chr4 (133-239)||(4490070-4490167)
chr4 (133-190)||(46242477-46242534)
chr4 (133-239)||(52294978-52295080)
chr4 (136-244)||(26534526-26534630)
chr4 (133-207)||(13318592-13318662)
chr4 (213-285)||(15660174-15660247)
chr4 (133-239)||(40338185-40338287)
chr4 (133-273)||(52493929-52494063)
chr4 (189-270)||(9451117-9451199)
chr4 (133-175)||(16516270-16516312)
chr4 (136-190)||(17727148-17727202)
chr4 (189-259)||(31473867-31473937)
chr4 (136-190)||(42776179-42776233)
chr4 (217-273)||(5715747-5715804)
chr4 (134-171)||(29686010-29686047)
chr4 (133-190)||(40548151-40548208)
chr4 (133-190)||(46243030-46243087)
chr4 (133-173)||(27284595-27284635)
chr4 (188-259)||(10633050-10633121)
chr4 (132-187)||(17727014-17727069)
chr4 (139-190)||(31947674-31947725)
chr4 (213-259)||(4896666-4896712)
chr4 (220-273)||(15660285-15660339)
chr4 (133-187)||(24705437-24705491)
chr4 (213-259)||(49111407-49111453)
chr4 (149-190)||(19461685-19461726)
chr4 (213-273)||(26250912-26250973)
chr4 (232-280)||(12169016-12169064)
chr4 (135-187)||(56118565-56118617)
[»] scaffold0400 (1 HSPs)
scaffold0400 (133-273)||(4431-4568)
[»] scaffold0365 (1 HSPs)
scaffold0365 (133-273)||(5075-5212)
[»] chr3 (49 HSPs)
chr3 (133-273)||(53470361-53470498)
chr3 (133-259)||(50168542-50168664)
chr3 (133-273)||(53129775-53129912)
chr3 (132-259)||(47767450-47767573)
chr3 (133-190)||(2104817-2104874)
chr3 (133-259)||(21307464-21307586)
chr3 (132-273)||(34088574-34088712)
chr3 (133-190)||(35279854-35279911)
chr3 (133-259)||(36397921-36398043)
chr3 (133-273)||(7302349-7302486)
chr3 (133-189)||(26547099-26547155)
chr3 (133-258)||(48947624-48947745)
chr3 (133-187)||(38506808-38506862)
chr3 (133-259)||(671551-671673)
chr3 (133-190)||(26323439-26323496)
chr3 (133-259)||(37054412-37054534)
chr3 (133-190)||(43863883-43863940)
chr3 (133-190)||(46706735-46706792)
chr3 (133-257)||(47336901-47337021)
chr3 (133-187)||(47284135-47284189)
chr3 (133-190)||(7976631-7976688)
chr3 (133-259)||(30766571-30766693)
chr3 (133-259)||(42005885-42006007)
chr3 (139-186)||(30767192-30767239)
chr3 (133-184)||(52527125-52527176)
chr3 (133-187)||(6836991-6837045)
chr3 (133-260)||(44288391-44288514)
chr3 (212-273)||(46635860-46635922)
chr3 (133-175)||(55460438-55460480)
chr3 (213-273)||(47284321-47284382)
chr3 (137-187)||(31021765-31021816)
chr3 (136-187)||(46635932-46635983)
chr3 (220-273)||(9129446-9129500)
chr3 (220-273)||(9137553-9137607)
chr3 (220-273)||(39110397-39110451)
chr3 (220-273)||(44692924-44692978)
chr3 (213-258)||(31070501-31070546)
chr3 (217-258)||(31189409-31189450)
chr3 (31-60)||(33145308-33145337)
chr3 (213-273)||(46429491-46429552)
chr3 (133-173)||(21731001-21731041)
chr3 (28-60)||(27055869-27055901)
chr3 (220-268)||(31070415-31070463)
chr3 (133-169)||(34396442-34396478)
chr3 (133-173)||(36635982-36636022)
chr3 (29-57)||(42178827-42178855)
chr3 (28-60)||(44412120-44412152)
chr3 (28-60)||(46017289-46017321)
chr3 (132-180)||(46199237-46199285)
[»] chr8 (35 HSPs)
chr8 (133-273)||(14242-14378)
chr8 (133-259)||(8049272-8049394)
chr8 (133-259)||(29257294-29257416)
chr8 (132-278)||(31976524-31976666)
chr8 (133-245)||(31980426-31980534)
chr8 (136-259)||(44346624-44346743)
chr8 (133-259)||(29482750-29482872)
chr8 (133-273)||(24044963-24045100)
chr8 (133-273)||(28324605-28324742)
chr8 (138-273)||(44889357-44889489)
chr8 (133-188)||(6416269-6416324)
chr8 (133-257)||(15186760-15186880)
chr8 (133-271)||(9982642-9982776)
chr8 (133-239)||(26520382-26520484)
chr8 (133-259)||(33377240-33377362)
chr8 (133-259)||(33986022-33986144)
chr8 (133-190)||(34008864-34008921)
chr8 (133-188)||(36625168-36625223)
chr8 (133-188)||(40734044-40734099)
chr8 (133-260)||(1088220-1088343)
chr8 (133-244)||(13144616-13144723)
chr8 (136-187)||(24510223-24510274)
chr8 (213-259)||(40046885-40046931)
chr8 (133-190)||(34388590-34388647)
chr8 (136-245)||(15718229-15718334)
chr8 (136-188)||(43167672-43167724)
chr8 (133-175)||(6460829-6460871)
chr8 (193-259)||(13404902-13404968)
chr8 (220-273)||(33902670-33902724)
chr8 (133-190)||(10593154-10593211)
chr8 (213-273)||(13404830-13404891)
chr8 (217-273)||(36103104-36103161)
chr8 (213-273)||(37268102-37268163)
chr8 (158-239)||(29611408-29611485)
chr8 (214-273)||(31807412-31807471)
[»] chr5 (39 HSPs)
chr5 (133-273)||(35379347-35379482)
chr5 (133-259)||(41762145-41762267)
chr5 (133-244)||(30519037-30519143)
chr5 (133-244)||(30559377-30559483)
chr5 (133-259)||(9894252-9894374)
chr5 (136-257)||(10314669-10314786)
chr5 (133-259)||(22303800-22303922)
chr5 (133-258)||(14834843-14834964)
chr5 (133-244)||(37241528-37241639)
chr5 (133-190)||(22305177-22305234)
chr5 (133-190)||(33146256-33146313)
chr5 (133-273)||(927305-927441)
chr5 (133-188)||(12479992-12480047)
chr5 (133-273)||(32250028-32250164)
chr5 (133-187)||(15270784-15270838)
chr5 (133-175)||(40089747-40089789)
chr5 (150-259)||(22766970-22767075)
chr5 (136-244)||(35111259-35111363)
chr5 (133-188)||(8264593-8264648)
chr5 (139-190)||(17493101-17493152)
chr5 (139-190)||(22302605-22302656)
chr5 (133-175)||(9894082-9894124)
chr5 (133-175)||(17542291-17542333)
chr5 (188-273)||(19533888-19533974)
chr5 (136-190)||(34105154-34105208)
chr5 (140-190)||(37241047-37241097)
chr5 (137-238)||(17492582-17492679)
chr5 (190-245)||(8255059-8255113)
chr5 (133-273)||(11601043-11601178)
chr5 (133-188)||(28489548-28489603)
chr5 (159-273)||(37090284-37090395)
chr5 (220-273)||(3563280-3563334)
chr5 (137-171)||(17444364-17444398)
chr5 (133-190)||(6772143-6772200)
chr5 (28-57)||(9621906-9621935)
chr5 (213-273)||(28828442-28828503)
chr5 (214-259)||(40643913-40643958)
chr5 (150-190)||(28490075-28490115)
chr5 (28-60)||(37508355-37508387)
[»] scaffold0318 (1 HSPs)
scaffold0318 (133-259)||(2885-3006)
[»] chr6 (18 HSPs)
chr6 (140-273)||(1368480-1368610)
chr6 (133-239)||(8475199-8475301)
chr6 (140-273)||(28918168-28918298)
chr6 (133-271)||(26901697-26901831)
chr6 (133-190)||(31412984-31413041)
chr6 (133-188)||(1195418-1195473)
chr6 (137-255)||(6358188-6358302)
chr6 (133-174)||(9697561-9697602)
chr6 (133-190)||(15616294-15616351)
chr6 (217-273)||(34244993-34245050)
chr6 (215-273)||(9763109-9763168)
chr6 (136-195)||(29395455-29395514)
chr6 (133-190)||(10105122-10105179)
chr6 (217-273)||(29889447-29889504)
chr6 (28-60)||(4909880-4909912)
chr6 (220-260)||(15299416-15299456)
chr6 (220-272)||(15299527-15299579)
chr6 (29-57)||(32549770-32549798)
[»] chr2 (39 HSPs)
chr2 (133-259)||(769054-769176)
chr2 (133-259)||(1583742-1583864)
chr2 (133-259)||(11141323-11141445)
chr2 (133-259)||(33189190-33189312)
chr2 (133-190)||(6749240-6749297)
chr2 (133-259)||(30698299-30698421)
chr2 (133-190)||(44255717-44255774)
chr2 (133-257)||(28740616-28740736)
chr2 (133-257)||(740724-740844)
chr2 (133-257)||(39630245-39630364)
chr2 (133-244)||(7167600-7167707)
chr2 (133-190)||(7227945-7228002)
chr2 (133-190)||(7309696-7309753)
chr2 (133-190)||(8736374-8736431)
chr2 (133-255)||(11036364-11036482)
chr2 (133-259)||(35047612-35047734)
chr2 (133-190)||(45094404-45094461)
chr2 (136-239)||(41585626-41585725)
chr2 (137-190)||(7611825-7611878)
chr2 (133-227)||(12263476-12263566)
chr2 (133-239)||(32840125-32840227)
chr2 (133-273)||(2274722-2274858)
chr2 (140-259)||(17905672-17905786)
chr2 (136-239)||(20935744-20935843)
chr2 (133-260)||(3092299-3092422)
chr2 (133-190)||(1730136-1730192)
chr2 (140-273)||(13017782-13017912)
chr2 (213-273)||(17180300-17180361)
chr2 (133-239)||(21504488-21504590)
chr2 (133-173)||(2924824-2924864)
chr2 (214-273)||(30751356-30751416)
chr2 (220-273)||(14365801-14365855)
chr2 (189-270)||(29279004-29279086)
chr2 (133-244)||(32839581-32839688)
chr2 (213-259)||(41461610-41461656)
chr2 (28-60)||(3039256-3039288)
chr2 (28-60)||(8555741-8555773)
chr2 (28-60)||(13767502-13767534)
chr2 (28-60)||(31899321-31899353)
[»] scaffold0014 (2 HSPs)
scaffold0014 (133-245)||(221129-221237)
scaffold0014 (133-190)||(223682-223739)
[»] scaffold0129 (1 HSPs)
scaffold0129 (133-188)||(19718-19773)
[»] scaffold0065 (2 HSPs)
scaffold0065 (133-190)||(9519-9576)
scaffold0065 (133-190)||(2841-2898)
[»] scaffold0301 (1 HSPs)
scaffold0301 (133-273)||(7154-7291)
[»] scaffold0337 (2 HSPs)
scaffold0337 (133-190)||(15799-15856)
scaffold0337 (133-190)||(16307-16364)
[»] scaffold0047 (1 HSPs)
scaffold0047 (133-187)||(50240-50294)
[»] scaffold0039 (1 HSPs)
scaffold0039 (133-190)||(109114-109170)
[»] scaffold0009 (1 HSPs)
scaffold0009 (220-260)||(42014-42054)


Alignment Details
Target: scaffold0169 (Bit Score: 66; Significance: 6e-29; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 136 - 273
Target Start/End: Complemental strand, 4212 - 4078
Alignment:
Q  136 aacaaaatacttgataaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattcgacaaaaaatatttgaattccctaaaaa 235  Q
    |||||||||||| ||||||||||||||||||||||||||| || |||||||    ||||||||||| |||||  |  ||| |||||||||||||| ||||    
T  4212 aacaaaatacttcataaatttccatcattttgaaaattcttcaaattatta----tccaaacaatagaattcacctcaaagtatttgaattccctcaaaa 4117  T
Q  236 cattacattagctcaaaacattcc-ttatccaaacacac 273  Q
    |||||||||  ||||||||||||| ||||||||||||||    
T  4116 cattacattctctcaaaacattcctttatccaaacacac 4078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 61; Significance: 6e-26; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 133 - 273
Target Start/End: Complemental strand, 31166450 - 31166313
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattcgacaaaaaatatttgaattccctaa 232  Q
    ||||||||||||||| ||||||||||||||||||||||||||| || |||||||| ||    ||||||| |||||  |  |||||||||| ||||| | |    
T  31166450 ttgaacaaaatacttcataaatttccatcattttgaaaattcttcaaattattattca----aacaatagaattcatctcaaaatatttgcattccatca 31166355  T
Q  233 aaacattacattagctcaaaacatt-ccttatccaaacacac 273  Q
    ||||||||||||| ||||||||||| ||| ||||||||||||    
T  31166354 aaacattacattatctcaaaacattccctcatccaaacacac 31166313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 133 - 239
Target Start/End: Original strand, 52135558 - 52135660
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattcgacaaaaaatatttgaattccctaa 232  Q
    ||||||||||||||| |||||||||||||||||| |||||||| || |||||    ||||||||||||||||||   | ||||||||||||||||||| |    
T  52135558 ttgaacaaaatacttcataaatttccatcattttaaaaattcttcaaattat----catccaaacaataaaatttacctaaaaatatttgaattccctca 52135653  T
Q  233 aaacatt 239  Q
    |||||||    
T  52135654 aaacatt 52135660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 133 - 273
Target Start/End: Complemental strand, 8224908 - 8224771
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattcgaca-aaaaatatttgaattcccta 231  Q
    ||||||||||||||| |||||||||||||||||||||||||||  | |||||    ||||||||||||  ||||| |||  ||| ||||| ||||||||     
T  8224908 ttgaacaaaatacttcataaatttccatcattttgaaaattctttaaattat----catccaaacaatggaattc-acatcaaagtatttcaattccctc 8224814  T
Q  232 aaaacattacattagctcaaaacatt-ccttatccaaacacac 273  Q
    |||||||||||||  ||||||||||| ||| ||||||||||||    
T  8224813 aaaacattacattccctcaaaacattccctcatccaaacacac 8224771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 133 - 273
Target Start/End: Original strand, 37036882 - 37037019
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattcgaca-aaaaatatttgaattcccta 231  Q
    ||||||||||||||| ||||||||| ||||||||||||||||| || ||||||    |||| ||||||  ||||  |||  ||||||||||||||||||     
T  37036882 ttgaacaaaatacttcataaatttctatcattttgaaaattcttcaaattatt----atccgaacaatggaatt-tacatcaaaatatttgaattccctc 37036976  T
Q  232 aaaacattacattagctcaaaacatt-ccttatccaaacacac 273  Q
    |||||||||||||  ||||||||||| ||| ||||||||||||    
T  37036977 aaaacattacattcactcaaaacattccctcatccaaacacac 37037019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 133 - 273
Target Start/End: Complemental strand, 946514 - 946379
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattcgacaaaaaatatttgaattccctaa 232  Q
    ||||||||||||||| |||||||||||||||||||||||| || || |||||||||||    ||||||| |||||  | |||  ||||| |||||||| |    
T  946514 ttgaacaaaatacttcataaatttccatcattttgaaaatgcttcaaattattatcca----aacaatagaattcatccaaag-tatttaaattccctca 946420  T
Q  233 aaacattacattagctcaaaacattccttatccaaacacac 273  Q
    ||||| ||||||  |||||| |||| || ||||||||||||    
T  946419 aaacaatacattccctcaaagcatttctcatccaaacacac 946379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 133 - 190
Target Start/End: Complemental strand, 39887267 - 39887210
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatcca 190  Q
    ||||||||||||||| ||||||||||||||||||||||||||| || |||||||||||    
T  39887267 ttgaacaaaatacttcataaatttccatcattttgaaaattcttcaaattattatcca 39887210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 133 - 239
Target Start/End: Original strand, 41822476 - 41822578
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattcgacaaaaaatatttgaattccctaa 232  Q
    ||||||||||||||| ||||||||||||||||||||||||||| || |||||||||||    ||||||  |||||  |  ||| |||||||||||||| |    
T  41822476 ttgaacaaaatacttcataaatttccatcattttgaaaattcttcaaattattatcca----aacaatggaattcatcttaaagtatttgaattccctca 41822571  T
Q  233 aaacatt 239  Q
    |||||||    
T  41822572 aaacatt 41822578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 133 - 190
Target Start/End: Original strand, 41822630 - 41822687
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatcca 190  Q
    ||||||||||||||| ||||||||||||||||||||||||||| || |||||||||||    
T  41822630 ttgaacaaaatacttcataaatttccatcattttgaaaattcttcaaattattatcca 41822687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 133 - 285
Target Start/End: Complemental strand, 10166638 - 10166490
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattcgacaaaaaatatttgaattccctaa 232  Q
    ||||| ||||||||| ||||||||| ||| ||||||||||||| || |||||    ||| |||||||| ||||||  | ||| |||||||| |||| | |    
T  10166638 ttgaataaaatacttcataaatttc-atcgttttgaaaattctccaaattat----cattcaaacaatgaaattcacctaaatatatttgagttccttca 10166544  T
Q  233 aaacattacattagctcaaaacattc-cttatccaaacacacccttggagtttt 285  Q
    ||||||||||||| | |||||||||| || |||||||||||| |||||| ||||    
T  10166543 aaacattacattaccacaaaacattctctcatccaaacacactcttggattttt 10166490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 133 - 273
Target Start/End: Complemental strand, 49659356 - 49659220
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattcgacaaaaaatatttgaattccctaa 232  Q
    ||||||||||||||| ||||||| ||||||||||||||||||| || |||||||||||    ||||||  |||||  |  ||| ||||| ||||||||      
T  49659356 ttgaacaaaatacttcataaattaccatcattttgaaaattcttcaaattattatcca----aacaatggaattcacctcaaagtatttaaattccctcg 49659261  T
Q  233 aaacattacattagctcaaaacattccttatccaaacacac 273  Q
     |||||||||||  ||||| |||||||  ||||||||||||    
T  49659260 taacattacattccctcaatacattccccatccaaacacac 49659220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 133 - 244
Target Start/End: Original strand, 15467896 - 15468003
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattcgacaaaaaatatttgaattccctaa 232  Q
    ||||||||||||||| |||||||||||||||||||||||| || || |||||||||||    ||||||  |||||  |  ||| |||||||||||||| |    
T  15467896 ttgaacaaaatacttcataaatttccatcattttgaaaatgcttcaaattattatcca----aacaatggaattcaccccaaagtatttgaattccctta 15467991  T
Q  233 aaacattacatt 244  Q
    ||||| ||||||    
T  15467992 aaacaatacatt 15468003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 133 - 244
Target Start/End: Complemental strand, 47820353 - 47820246
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattcgacaaaaaatatttgaattccctaa 232  Q
    ||||||||||||||| |||||||||||||||||| ||||| || || |||||||    |||||||||| ||||||  |  ||| |||||||||||||| |    
T  47820353 ttgaacaaaatacttcataaatttccatcattttaaaaatgcttcaaattatta----tccaaacaatgaaattcaccctaaagtatttgaattccctta 47820258  T
Q  233 aaacattacatt 244  Q
    ||||| ||||||    
T  47820257 aaacaatacatt 47820246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 133 - 190
Target Start/End: Complemental strand, 13181728 - 13181671
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatcca 190  Q
    ||||||||||||||| ||||||||||||||||||||| ||||| || |||||||||||    
T  13181728 ttgaacaaaatacttcataaatttccatcattttgaatattcttcaaattattatcca 13181671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 133 - 190
Target Start/End: Original strand, 32287865 - 32287922
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatcca 190  Q
    ||||||||||||||| ||||||||||||||||||| ||||||| || |||||||||||    
T  32287865 ttgaacaaaatactttataaatttccatcattttggaaattcttcaaattattatcca 32287922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 133 - 190
Target Start/End: Complemental strand, 35491297 - 35491240
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatcca 190  Q
    |||| |||||||||| ||||||||||||||||||||||||||| || |||||||||||    
T  35491297 ttgagcaaaatacttcataaatttccatcattttgaaaattcttcaaattattatcca 35491240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 133 - 190
Target Start/End: Original strand, 37447292 - 37447349
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatcca 190  Q
    |||||| |||||||| ||||||||||||||||||||||||||| || |||||||||||    
T  37447292 ttgaaccaaatacttcataaatttccatcattttgaaaattcttcaaattattatcca 37447349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 133 - 190
Target Start/End: Original strand, 37447835 - 37447892
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatcca 190  Q
    ||||||||||||||| ||||||||||||||||||||||||||| || | |||||||||    
T  37447835 ttgaacaaaatacttcataaatttccatcattttgaaaattcttcaaactattatcca 37447892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 133 - 190
Target Start/End: Complemental strand, 48953708 - 48953651
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatcca 190  Q
    ||||||||||||||| |||||| |||||||||||||||||||| || |||||||||||    
T  48953708 ttgaacaaaatacttcataaatatccatcattttgaaaattcttcaaattattatcca 48953651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 136 - 273
Target Start/End: Complemental strand, 51847988 - 51847855
Alignment:
Q  136 aacaaaatacttgataaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattcgacaaaaaatatttgaattccctaaaaa 235  Q
    ||||||||||||||||||||||||||||| | || ||||| || |||||    ||||||||| ||  ||||| ||  ||| |||||||||| | | ||||    
T  51847988 aacaaaatacttgataaatttccatcattcttaatattctccaaattat----catccaaacgatggaattc-acctaaagtatttgaatttctttaaaa 51847894  T
Q  236 cattacattagctcaaaacattcct-tatccaaacacac 273  Q
    |||||||||| ||||||||||||||  ||||||||||||    
T  51847893 cattacattacctcaaaacattcctccatccaaacacac 51847855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 133 - 259
Target Start/End: Original strand, 37448334 - 37448456
Alignment:
Q  133 ttgaacaaa-atacttgataaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattcgaca-aaaaatatttgaattccct 230  Q
    ||||||||| |||||| ||||||||||||||||||||||||||| || |||||     |||||||||||  ||||| |||  ||| ||||| ||||||||    
T  37448334 ttgaacaaatatacttcataaatttccatcattttgaaaattctccaaattat-----atccaaacaatggaattc-acatcaaagtatttaaattccct 37448427  T
Q  231 aaaaacattacattagctcaaaacattcc 259  Q
     |||||||||||||  |||||||||||||    
T  37448428 caaaacattacattctctcaaaacattcc 37448456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 133 - 258
Target Start/End: Complemental strand, 44570818 - 44570697
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattcgacaaaaaatatttgaattccctaa 232  Q
    ||||||||||||||| ||||||||||||||||| ||||||||| || | ||||    |||||||||||  |||||  |  ||  |||||||||||| | |    
T  44570818 ttgaacaaaatacttcataaatttccatcatttcgaaaattcttcaaactatt----atccaaacaatggaattcacctcaaggtatttgaattccttca 44570723  T
Q  233 aaacattacattagctcaaaacattc 258  Q
    ||||||||||||  ||||||||||||    
T  44570722 aaacattacattccctcaaaacattc 44570697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 133 - 189
Target Start/End: Original strand, 49216271 - 49216327
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatcc 189  Q
    ||||||||||||||| |||||||||||||||||||||||||||  | ||||||||||    
T  49216271 ttgaacaaaatacttcataaatttccatcattttgaaaattctttaaattattatcc 49216327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 136 - 236
Target Start/End: Complemental strand, 50471887 - 50471791
Alignment:
Q  136 aacaaaatacttgataaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattcgacaaaaaatatttgaattccctaaaaa 235  Q
    |||||||||||| | |||||||||||||||||||||||||  | |||||||    |||||||||||||||||  |  ||| |||||||||||||| ||||    
T  50471887 aacaaaatacttcaaaaatttccatcattttgaaaattctttaaattatta----tccaaacaataaaattcacctgaaagtatttgaattccctcaaaa 50471792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 133 - 190
Target Start/End: Original strand, 28632519 - 28632576
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatcca 190  Q
    ||||||||||||||| |||||||| ||||||||||||||||||  | |||||||||||    
T  28632519 ttgaacaaaatacttcataaattttcatcattttgaaaattctttaaattattatcca 28632576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 133 - 190
Target Start/End: Original strand, 41823093 - 41823150
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatcca 190  Q
    ||||||||||||||| |||||||||||| |||||||||||||| || | |||||||||    
T  41823093 ttgaacaaaatacttcataaatttccattattttgaaaattcttcaaactattatcca 41823150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 133 - 190
Target Start/End: Complemental strand, 44571341 - 44571284
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatcca 190  Q
    ||||||||||||||| |||||||||||||||||| ||||||||  | |||||||||||    
T  44571341 ttgaacaaaatactttataaatttccatcattttaaaaattctttaaattattatcca 44571284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 213 - 273
Target Start/End: Original strand, 38277510 - 38277570
Alignment:
Q  213 aaaatatttgaattccctaaaaacattacattagctcaaaacattccttatccaaacacac 273  Q
    |||||| ||||||||||| |||||||||||||| ||||||| |||||  ||||||||||||    
T  38277510 aaaataattgaattccctcaaaacattacattacctcaaaatattccccatccaaacacac 38277570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 133 - 187
Target Start/End: Complemental strand, 32128170 - 32128116
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattat 187  Q
    ||||||||||||| | ||||||| ||||||||||||||||||| || ||||||||    
T  32128170 ttgaacaaaatacctcataaattcccatcattttgaaaattcttcaaattattat 32128116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 133 - 190
Target Start/End: Complemental strand, 947053 - 946996
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatcca 190  Q
    |||||||||||| || ||||||||| |||||||||||||| || || |||||||||||    
T  947053 ttgaacaaaatatttcataaatttctatcattttgaaaatgcttcaaattattatcca 946996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 149 - 259
Target Start/End: Original strand, 6470635 - 6470741
Alignment:
Q  149 ataaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattcgacaaaaaatatttgaattccctaaaaacattacattagct 248  Q
    ||||||||||||||||||||||||||| || ||||||    || ||||||||  ||| |  |  |||  ||||||||||||| |||||||||||||  ||    
T  6470635 ataaatttccatcattttgaaaattcttcaaattatt----attcaaacaatggaatccacctcaaagaatttgaattccctcaaaacattacattctct 6470730  T
Q  249 caaaacattcc 259  Q
    |||||||||||    
T  6470731 caaaacattcc 6470741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 133 - 190
Target Start/End: Original strand, 21267744 - 21267800
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatcca 190  Q
    ||||||||||| ||| ||||||| ||||||||||||||||||| || |||||||||||    
T  21267744 ttgaacaaaattcttcataaatt-ccatcattttgaaaattcttcaaattattatcca 21267800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 26501092 - 26501149
Alignment:
Q  217 tatttgaattccctaaaaacattacattagctcaaaacattcct-tatccaaacacac 273  Q
    |||||||||||||| |||||||||||||  ||||||||||||||  ||||||||||||    
T  26501092 tatttgaattccctcaaaacattacattccctcaaaacattcctccatccaaacacac 26501149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 213 - 273
Target Start/End: Original strand, 50005174 - 50005235
Alignment:
Q  213 aaaatatttgaattccctaaaaacattacattagctcaaaacattcct-tatccaaacacac 273  Q
    |||||| ||||||||||| |||||||||||||| ||||||| ||||||  ||||||||||||    
T  50005174 aaaataattgaattccctcaaaacattacattacctcaaaatattcctccatccaaacacac 50005235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 213 - 276
Target Start/End: Complemental strand, 45565458 - 45565394
Alignment:
Q  213 aaaatatttgaattccctaaaaacattacattagctcaaaacatt-ccttatccaaacacaccct 276  Q
    |||||| ||||||||||| |||||||||||||  ||||||||||| ||  |||||||||||||||    
T  45565458 aaaatagttgaattccctcaaaacattacattctctcaaaacattcccccatccaaacacaccct 45565394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 139 - 190
Target Start/End: Complemental strand, 32647435 - 32647384
Alignment:
Q  139 aaaatacttgataaatttccatcattttgaaaattctacatattattatcca 190  Q
    ||||||||| |||||||||||||||||||||||| || || |||| ||||||    
T  32647435 aaaatacttcataaatttccatcattttgaaaatgcttcaaattaatatcca 32647384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 220 - 273
Target Start/End: Complemental strand, 15034716 - 15034662
Alignment:
Q  220 ttgaattccctaaaaacattacattagctcaaaacattcct-tatccaaacacac 273  Q
    ||||||||||| |||||||||||||  ||||||||||||||  ||||||||||||    
T  15034716 ttgaattccctcaaaacattacattccctcaaaacattcctccatccaaacacac 15034662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 213 - 282
Target Start/End: Original strand, 32287942 - 32288012
Alignment:
Q  213 aaaatatttgaattccctaaaaacattacattagctcaaaacattcct-tatccaaacacacccttggagt 282  Q
    ||| |||||||||| ||| |||||||||||||  |||||||| |||||  |||||||||||| ||||||||    
T  32287942 aaagtatttgaatttcctcaaaacattacattccctcaaaactttcctccatccaaacacactcttggagt 32288012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 213 - 259
Target Start/End: Original strand, 40264125 - 40264171
Alignment:
Q  213 aaaatatttgaattccctaaaaacattacattagctcaaaacattcc 259  Q
    |||||| ||||||||||| |||||||||||||| ||||||| |||||    
T  40264125 aaaataattgaattccctcaaaacattacattacctcaaaatattcc 40264171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 133 - 174
Target Start/End: Complemental strand, 34003601 - 34003560
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattc 174  Q
    |||||||||||| || |||||||||||||||||||| |||||    
T  34003601 ttgaacaaaatatttcataaatttccatcattttgataattc 34003560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 47165225 - 47165282
Alignment:
Q  217 tatttgaattccctaaaaacattacattagctcaaaacattcct-tatccaaacacac 273  Q
    |||||||||||||| |||||||||||||  ||||||||||| ||  ||||||||||||    
T  47165225 tatttgaattccctcaaaacattacatttcctcaaaacatttctccatccaaacacac 47165282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 28 - 60
Target Start/End: Original strand, 20712181 - 20712213
Alignment:
Q  28 aattttaaaaatattataacaatatagattgaa 60  Q
    |||||||||||||||||||||| ||||||||||    
T  20712181 aattttaaaaatattataacaacatagattgaa 20712213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 28 - 60
Target Start/End: Original strand, 36668614 - 36668646
Alignment:
Q  28 aattttaaaaatattataacaatatagattgaa 60  Q
    |||||||| ||||||||||||||||||||||||    
T  36668614 aattttaagaatattataacaatatagattgaa 36668646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 28 - 60
Target Start/End: Original strand, 42162018 - 42162050
Alignment:
Q  28 aattttaaaaatattataacaatatagattgaa 60  Q
    |||||||||||||||||||||| ||||||||||    
T  42162018 aattttaaaaatattataacaacatagattgaa 42162050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 54; Significance: 8e-22; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 133 - 259
Target Start/End: Original strand, 25189145 - 25189267
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattcgacaaaaaatatttgaattccctaa 232  Q
    |||||||||||||||  |||||||||||||||||||||||||| || |||||    |||||||||||| ||||||     ||| |||||||||||||| |    
T  25189145 ttgaacaaaatacttcgtaaatttccatcattttgaaaattcttcaaattat----catccaaacaatgaaattcacttcaaagtatttgaattccctca 25189240  T
Q  233 aaacattacattagctcaaaacattcc 259  Q
    ||||||| ||||| |||||||||||||    
T  25189241 aaacattgcattacctcaaaacattcc 25189267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 133 - 272
Target Start/End: Original strand, 23455166 - 23455302
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattcgacaaaaaatatttgaattccctaa 232  Q
    ||||||||||||||| |||||||||||||||||||||||| || || |||||||||||    ||||||  |||||  |  ||| |||||||||||||| |    
T  23455166 ttgaacaaaatacttcataaatttccatcattttgaaaatgcttcaaattattatcca----aacaatggaattcaccccaaagtatttgaattccctca 23455261  T
Q  233 aaacattacattagctcaaaacatt-ccttatccaaacaca 272  Q
    ||||| ||||||  ||||||||||| ||| |||||||||||    
T  23455262 aaacaatacattccctcaaaacattccctcatccaaacaca 23455302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 133 - 239
Target Start/End: Complemental strand, 32650713 - 32650611
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattcgacaaaaaatatttgaattccctaa 232  Q
    ||||| ||||||||| ||||||||||||||||||||||||||| || |||||||    |||||||||||||||||  |  ||| |||||||||||||| |    
T  32650713 ttgaaaaaaatacttcataaatttccatcattttgaaaattcttcaaattatta----tccaaacaataaaattcacctcaaagtatttgaattccctca 32650618  T
Q  233 aaacatt 239  Q
    |||||||    
T  32650617 aaacatt 32650611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 133 - 259
Target Start/End: Original strand, 39342561 - 39342683
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattcgacaaaaaatatttgaattccctaa 232  Q
    ||||||||||||||| |||||||||||||||||||||||| || || |||||||||||    ||||||  |||||  |  ||| |||||||||||||| |    
T  39342561 ttgaacaaaatacttcataaatttccatcattttgaaaatgcttcaaattattatcca----aacaatggaattcaccccaaagtatttgaattccctta 39342656  T
Q  233 aaacattacattagctcaaaacattcc 259  Q
    ||||| ||||||  |||||||||||||    
T  39342657 aaacaatacattccctcaaaacattcc 39342683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 133 - 273
Target Start/End: Original strand, 9784850 - 9784987
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattcgacaaaaaatatttgaattccctaa 232  Q
    ||||||||||||||| |||||||||||||||||||||||| || || ||||||    |||||||||||  | |||  |  ||| |||||||||||||| |    
T  9784850 ttgaacaaaatacttcataaatttccatcattttgaaaatgcttcaaattatt----atccaaacaatggatttcaccccaaagtatttgaattccctca 9784945  T
Q  233 aaacattacattagctcaaaacattcct-tatccaaacacac 273  Q
    ||||| ||||||  ||||||||||||||  ||||||||||||    
T  9784946 aaacaatacattccctcaaaacattcctccatccaaacacac 9784987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 136 - 259
Target Start/End: Original strand, 28539090 - 28539209
Alignment:
Q  136 aacaaaatacttgataaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattcgacaaaaaatatttgaattccctaaaaa 235  Q
    |||||||||||| |||||||||||||||||||||||| || || |||||||||||    ||||||  |||||  |  ||| |||||||||||||| ||||    
T  28539090 aacaaaatacttcataaatttccatcattttgaaaatgcttcaaattattatcca----aacaatggaattcaccccaaagtatttgaattccctcaaaa 28539185  T
Q  236 cattacattagctcaaaacattcc 259  Q
    || ||||||  |||||||||||||    
T  28539186 caatacattccctcaaaacattcc 28539209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 133 - 190
Target Start/End: Original strand, 13814913 - 13814970
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatcca 190  Q
    ||||||||||||||| ||||||||||||||||||||||||||| || |||||||||||    
T  13814913 ttgaacaaaatacttcataaatttccatcattttgaaaattcttcaaattattatcca 13814970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 133 - 259
Target Start/End: Original strand, 14603181 - 14603303
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattcgacaaaaaatatttgaattccctaa 232  Q
    ||||||||||||||| |||||||||||||||||||||||| || || ||||||    |||||||||||  ||||   |  ||| |||||||||||||| |    
T  14603181 ttgaacaaaatacttcataaatttccatcattttgaaaatgcttcaaattatt----atccaaacaatggaatttaccccaaagtatttgaattccctta 14603276  T
Q  233 aaacattacattagctcaaaacattcc 259  Q
    ||||| ||||||  |||||||||||||    
T  14603277 aaacaatacattccctcaaaacattcc 14603303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 133 - 190
Target Start/End: Complemental strand, 40495370 - 40495313
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatcca 190  Q
    ||||||||||||||| ||||||||||||||||||||||||||| || |||||||||||    
T  40495370 ttgaacaaaatacttcataaatttccatcattttgaaaattcttcaaattattatcca 40495313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 133 - 190
Target Start/End: Original strand, 41443019 - 41443076
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatcca 190  Q
    ||||||||||||||| ||||||||||||||||||||||||||| || |||||||||||    
T  41443019 ttgaacaaaatactttataaatttccatcattttgaaaattcttcaaattattatcca 41443076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 133 - 190
Target Start/End: Complemental strand, 45984480 - 45984423
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatcca 190  Q
    ||||||||||||||| ||||||||||||||||||||||||||| || |||||||||||    
T  45984480 ttgaacaaaatacttcataaatttccatcattttgaaaattcttcaaattattatcca 45984423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 133 - 190
Target Start/End: Complemental strand, 45988840 - 45988783
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatcca 190  Q
    ||||||||||||||| ||||||||||||||||||||||||||| || |||||||||||    
T  45988840 ttgaacaaaatacttcataaatttccatcattttgaaaattcttcaaattattatcca 45988783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 133 - 273
Target Start/End: Original strand, 23548530 - 23548667
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattcgacaaaaaatatttgaattccctaa 232  Q
    ||||||||||||||| ||||||||| |||||||||||||| || || |||||||||||    ||||||  |||||  |  ||| |||||||||| ||| |    
T  23548530 ttgaacaaaatacttcataaatttctatcattttgaaaatgcttcaaattattatcca----aacaatggaattcaccccaaagtatttgaatttcctca 23548625  T
Q  233 aaacattacattagctcaaaacattcct-tatccaaacacac 273  Q
    ||||| ||||||  ||||||||||||||  ||||||||||||    
T  23548626 aaacaatacattccctcaaaacattcctccatccaaacacac 23548667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 133 - 257
Target Start/End: Complemental strand, 30524395 - 30524275
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattcgacaaaaaatatttgaattccctaa 232  Q
    ||||||||||||||| |||||||||||||||||| |||||  | || |||||||    |||||||||| ||||||  |  ||| |||||||||||||| |    
T  30524395 ttgaacaaaatacttcataaatttccatcattttaaaaatatttcaaattatta----tccaaacaatgaaattcatcccaaagtatttgaattccctca 30524300  T
Q  233 aaacattacattagctcaaaacatt 257  Q
    ||||||||||||   ||||||||||    
T  30524299 aaacattacattccttcaaaacatt 30524275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 136 - 259
Target Start/End: Complemental strand, 35455941 - 35455822
Alignment:
Q  136 aacaaaatacttgataaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattcgacaaaaaatatttgaattccctaaaaa 235  Q
    |||||||||||| |||||||||||||||||||||||| || || |||||||    ||||||||||  ||||   |  ||| |||||||||||||| ||||    
T  35455941 aacaaaatacttcataaatttccatcattttgaaaatgcttcaaattatta----tccaaacaatggaatttaccccaaagtatttgaattcccttaaaa 35455846  T
Q  236 cattacattagctcaaaacattcc 259  Q
    || ||||||  |||||||||||||    
T  35455845 caatacattccctcaaaacattcc 35455822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 133 - 190
Target Start/End: Complemental strand, 26416093 - 26416036
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatcca 190  Q
    |||||||||||||||  |||||||||||||||||||||||||| || |||||||||||    
T  26416093 ttgaacaaaatacttcctaaatttccatcattttgaaaattcttcaaattattatcca 26416036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 133 - 259
Target Start/End: Complemental strand, 30629197 - 30629075
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattcgacaaaaaatatttgaattccctaa 232  Q
    ||||| ||||||||| |||||||||||||||||||||||| || || |||||||    |||||||||| ||||||  |  ||| ||||| ||||| || |    
T  30629197 ttgaaaaaaatacttcataaatttccatcattttgaaaatccttcaaattatta----tccaaacaatgaaattcaccccaaagtatttaaattctctta 30629102  T
Q  233 aaacattacattagctcaaaacattcc 259  Q
    ||||| ||||||  |||||||||||||    
T  30629101 aaacaatacattccctcaaaacattcc 30629075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 133 - 190
Target Start/End: Complemental strand, 33310944 - 33310887
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatcca 190  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||| |||| ||||||    
T  33310944 ttgaacaaaatacttcataaatttccatcattttgaaaactctacaaattactatcca 33310887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 133 - 239
Target Start/End: Complemental strand, 40495857 - 40495755
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattcgacaaaaaatatttgaattccctaa 232  Q
    ||||||||||||||| |||||||||||||||||| ||||| || || |||||||||||    ||||||  |||||  |  |||||||||||||||||| |    
T  40495857 ttgaacaaaatacttcataaatttccatcattttaaaaatgcttcaaattattatcca----aacaatggaattcaccccaaaatatttgaattccctca 40495762  T
Q  233 aaacatt 239  Q
    |||||||    
T  40495761 aaacatt 40495755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 133 - 190
Target Start/End: Complemental strand, 40667481 - 40667424
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatcca 190  Q
    ||||||||||||||| |||||||||||||||||||||||| || || |||||||||||    
T  40667481 ttgaacaaaatacttcataaatttccatcattttgaaaatgcttcaaattattatcca 40667424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 133 - 258
Target Start/End: Original strand, 3905578 - 3905699
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattcgacaaaaaatatttgaattccctaa 232  Q
    |||||||||||| || |||||||| |||||||||||||||||| || ||||||    |||||||||||| |||||  |  ||| |||||||||||| | |    
T  3905578 ttgaacaaaataattcataaattttcatcattttgaaaattcttcaaattatt----atccaaacaatagaattcacctcaaagtatttgaattccttga 3905673  T
Q  233 aaacattacattagctcaaaacattc 258  Q
    ||||||||  ||  ||||||||||||    
T  3905674 aaacattatttttcctcaaaacattc 3905699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 133 - 257
Target Start/End: Original strand, 22391507 - 22391626
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattcgacaaaaaatatttgaattccctaa 232  Q
    ||||||||||||||| | |||||||||||||||| ||||||||  | ||||||||||    ||||||| ||||||  |  ||||||||| ||||| || |    
T  22391507 ttgaacaaaatacttcagaaatttccatcatttt-aaaattctttaaattattatcc----aaacaatgaaattcacctcaaaatatttaaattctctca 22391601  T
Q  233 aaacattacattagctcaaaacatt 257  Q
    ||||||||||||  |||||||||||    
T  22391602 aaacattacattccctcaaaacatt 22391626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 135 - 190
Target Start/End: Original strand, 36328717 - 36328772
Alignment:
Q  135 gaacaaaatacttgataaatttccatcattttgaaaattctacatattattatcca 190  Q
    ||||||||||||| ||||||| ||||||||||||||||||| || |||||||||||    
T  36328717 gaacaaaatacttcataaattaccatcattttgaaaattcttcaaattattatcca 36328772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 136 - 190
Target Start/End: Original strand, 30080723 - 30080777
Alignment:
Q  136 aacaaaatacttgataaatttccatcattttgaaaattctacatattattatcca 190  Q
    |||||||||||| ||||||||||||||||||||||||||| || ||||| |||||    
T  30080723 aacaaaatacttcataaatttccatcattttgaaaattcttcaaattatcatcca 30080777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 133 - 244
Target Start/End: Complemental strand, 43791230 - 43791123
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattcgacaaaaaatatttgaattccctaa 232  Q
    |||||| ||||||||  |||||||||||||||||||||||||| || |||||||    ||||||||||  | |||  |  ||| |||||||||||||| |    
T  43791230 ttgaaccaaatacttattaaatttccatcattttgaaaattcttcaaattatta----tccaaacaatggagttcacctcaaagtatttgaattccctca 43791135  T
Q  233 aaacattacatt 244  Q
    ||||||||||||    
T  43791134 aaacattacatt 43791123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 133 - 239
Target Start/End: Complemental strand, 14790253 - 14790151
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattcgacaaaaaatatttgaattccctaa 232  Q
    ||||||||||||||| |||||||| ||||||||| ||||||||  | |||||||    |||||| ||||||||||  |  ||| |||||||||||||| |    
T  14790253 ttgaacaaaatactttataaattttcatcattttaaaaattctttaaattatta----tccaaataataaaattcacctcaaagtatttgaattccctca 14790158  T
Q  233 aaacatt 239  Q
    |||||||    
T  14790157 aaacatt 14790151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 133 - 190
Target Start/End: Original strand, 30587822 - 30587879
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatcca 190  Q
    ||||||||||||||| |||||||||||||||||||||||| || || | |||||||||    
T  30587822 ttgaacaaaatacttcataaatttccatcattttgaaaatacttcaaactattatcca 30587879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 133 - 190
Target Start/End: Complemental strand, 42816689 - 42816632
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatcca 190  Q
    ||||||||||||||| |||||||| ||||||||||||||| || || |||||||||||    
T  42816689 ttgaacaaaatacttcataaattttcatcattttgaaaatgcttcaaattattatcca 42816632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 133 - 188
Target Start/End: Original strand, 19865473 - 19865528
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatc 188  Q
    ||||||||||||||| ||||||| |||||||||||||||||||  | |||||||||    
T  19865473 ttgaacaaaatacttcataaattaccatcattttgaaaattctttaaattattatc 19865528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 6498764 - 6498821
Alignment:
Q  217 tatttgaattccctaaaaacattacattagctcaaaacattcct-tatccaaacacac 273  Q
    |||||||||||||| |||||||||||||  ||||||||||||||  ||||||||||||    
T  6498764 tatttgaattccctcaaaacattacattccctcaaaacattcctccatccaaacacac 6498821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 133 - 170
Target Start/End: Original strand, 18926740 - 18926777
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaa 170  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  18926740 ttgaacaaaatacttcataaatttccatcattttgaaa 18926777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 213 - 273
Target Start/End: Original strand, 29065914 - 29065975
Alignment:
Q  213 aaaatatttgaattccctaaaaacattacattagctcaaaacattcct-tatccaaacacac 273  Q
    |||||| ||||||||||| |||||||||||||| || |||||||||||  ||||||||||||    
T  29065914 aaaataattgaattccctcaaaacattacattaccttaaaacattcctccatccaaacacac 29065975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 217 - 284
Target Start/End: Original strand, 35776954 - 35777022
Alignment:
Q  217 tatttgaattccctaaaaacattacattagctcaaaacatt-ccttatccaaacacacccttggagttt 284  Q
    |||||||||||||| | |||||||||||  ||||||||||| ||| |||||||||||| ||| ||||||    
T  35776954 tatttgaattccctcataacattacattccctcaaaacattccctcatccaaacacactcttagagttt 35777022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 28 - 60
Target Start/End: Complemental strand, 38235910 - 38235878
Alignment:
Q  28 aattttaaaaatattataacaatatagattgaa 60  Q
    |||||||||||||||||||||||||||||||||    
T  38235910 aattttaaaaatattataacaatatagattgaa 38235878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 220 - 259
Target Start/End: Complemental strand, 2057452 - 2057413
Alignment:
Q  220 ttgaattccctaaaaacattacattagctcaaaacattcc 259  Q
    ||||||||||| ||||||||||||| ||||||||||||||    
T  2057452 ttgaattccctcaaaacattacattcgctcaaaacattcc 2057413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 137 - 172
Target Start/End: Complemental strand, 15991027 - 15990992
Alignment:
Q  137 acaaaatacttgataaatttccatcattttgaaaat 172  Q
    ||||||||||| ||||||||||||||||||||||||    
T  15991027 acaaaatacttcataaatttccatcattttgaaaat 15990992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 132 - 171
Target Start/End: Original strand, 18938930 - 18938969
Alignment:
Q  132 tttgaacaaaatacttgataaatttccatcattttgaaaa 171  Q
    |||||||||||||||| ||||||||| |||||||||||||    
T  18938930 tttgaacaaaatacttcataaatttctatcattttgaaaa 18938969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 213 - 259
Target Start/End: Original strand, 5644772 - 5644818
Alignment:
Q  213 aaaatatttgaattccctaaaaacattacattagctcaaaacattcc 259  Q
    |||||| ||||||||||| |||||||||||||| |||||||| ||||    
T  5644772 aaaataattgaattccctcaaaacattacattacctcaaaacgttcc 5644818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 220 - 260
Target Start/End: Complemental strand, 5644734 - 5644694
Alignment:
Q  220 ttgaattccctaaaaacattacattagctcaaaacattcct 260  Q
    ||||||||||| |||||||||||||  ||||||||||||||    
T  5644734 ttgaattccctcaaaacattacattccctcaaaacattcct 5644694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 157 - 273
Target Start/End: Original strand, 18789189 - 18789302
Alignment:
Q  157 ccatcattttgaaaattctacatattattatccatccaaacaataaaattcgacaaaaaatatttgaattccctaaaaacattacattagctcaaaacat 256  Q
    ||||||||||||||||||| || |||||||||||    ||||||  |||||  |  ||| |||||||||||||| | ||||||| |||  ||||||| ||    
T  18789189 ccatcattttgaaaattcttcaaattattatcca----aacaatggaattcaccttaaagtatttgaattccctcataacattatattctctcaaaatat 18789284  T
Q  257 tcct-tatccaaacacac 273  Q
    ||||  ||||||||||||    
T  18789285 tcctccatccaaacacac 18789302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 28 - 60
Target Start/End: Complemental strand, 36747411 - 36747379
Alignment:
Q  28 aattttaaaaatattataacaatatagattgaa 60  Q
    |||||||| ||||||||||||||||||||||||    
T  36747411 aattttaagaatattataacaatatagattgaa 36747379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 28 - 60
Target Start/End: Original strand, 40264226 - 40264258
Alignment:
Q  28 aattttaaaaatattataacaatatagattgaa 60  Q
    |||||||||||||||||||||||||| ||||||    
T  40264226 aattttaaaaatattataacaatataaattgaa 40264258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 28 - 60
Target Start/End: Original strand, 42620317 - 42620349
Alignment:
Q  28 aattttaaaaatattataacaatatagattgaa 60  Q
    |||||||| ||||||||||||||||||||||||    
T  42620317 aattttaagaatattataacaatatagattgaa 42620349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 28 - 60
Target Start/End: Original strand, 43778540 - 43778572
Alignment:
Q  28 aattttaaaaatattataacaatatagattgaa 60  Q
    |||||||| ||||||||||||||||||||||||    
T  43778540 aattttaagaatattataacaatatagattgaa 43778572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 28 - 60
Target Start/End: Complemental strand, 44720197 - 44720165
Alignment:
Q  28 aattttaaaaatattataacaatatagattgaa 60  Q
    |||||||| ||||||||||||||||||||||||    
T  44720197 aattttaagaatattataacaatatagattgaa 44720165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 54; Significance: 8e-22; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 132 - 258
Target Start/End: Complemental strand, 42776778 - 42776656
Alignment:
Q  132 tttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattcgacaaaaaatatttgaattcccta 231  Q
    |||||||||||||||| ||||||||||||||||||||||||||| || |||||    |||||||||||| ||||||  | |||| ||||||||||  ||     
T  42776778 tttgaacaaaatacttcataaatttccatcattttgaaaattcttcaaattat----catccaaacaatgaaattcacctaaaagtatttgaatttactc 42776683  T
Q  232 aaaacattacattagctcaaaacattc 258  Q
    |||||||||||| | || |||||||||    
T  42776682 aaaacattacataacctaaaaacattc 42776656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 133 - 244
Target Start/End: Complemental strand, 29091277 - 29091170
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattcgacaaaaaa-tatttgaattcccta 231  Q
    ||||||||||||||| ||||||||||||||||||||||||||| || |||||||||||    ||||||| ||||| |||  ||| ||||||||||||||     
T  29091277 ttgaacaaaatacttcataaatttccatcattttgaaaattcttcaaattattatcca----aacaatagaattc-acatcaaagtatttgaattccctc 29091183  T
Q  232 aaaacattacatt 244  Q
    |||||||||||||    
T  29091182 aaaacattacatt 29091170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 133 - 257
Target Start/End: Complemental strand, 35470262 - 35470142
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattcgacaaaaaatatttgaattccctaa 232  Q
    ||||||||||||||| |||||||||||||||||||||||| || || |||||||||||    ||||||  |||||  |  ||| |||||||||||||| |    
T  35470262 ttgaacaaaatacttcataaatttccatcattttgaaaatgcttcaaattattatcca----aacaatggaattcaccccaaagtatttgaattccctca 35470167  T
Q  233 aaacattacattagctcaaaacatt 257  Q
    ||||| ||||||  |||||||||||    
T  35470166 aaacaatacattccctcaaaacatt 35470142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 133 - 239
Target Start/End: Original strand, 53760723 - 53760825
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattcgacaa-aaaatatttgaattcccta 231  Q
    ||||||||||||||| |||||||||||||||||| |||||||| || |||||||||||    ||||||| ||||| |||  ||||||||||||||||||     
T  53760723 ttgaacaaaatacttcataaatttccatcattttaaaaattcttcaaattattatcca----aacaatagaattc-acatcaaaatatttgaattccctc 53760817  T
Q  232 aaaacatt 239  Q
    ||||||||    
T  53760818 aaaacatt 53760825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 133 - 259
Target Start/End: Complemental strand, 2125997 - 2125875
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattcgacaaaaaatatttgaattccctaa 232  Q
    ||||||||||||||| |||||||||||||||||||||||| || || |||||||||||    ||||||  |||||  |  ||| |||||||||||||| |    
T  2125997 ttgaacaaaatacttcataaatttccatcattttgaaaatgcttcaaattattatcca----aacaatggaattcaccccaaagtatttgaattccctca 2125902  T
Q  233 aaacattacattagctcaaaacattcc 259  Q
    ||||| ||||||  ||||||| |||||    
T  2125901 aaacaatacattccctcaaaatattcc 2125875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 133 - 282
Target Start/End: Complemental strand, 10354482 - 10354336
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattcgacaaaaaatatttgaattccctaa 232  Q
    ||||||||||||||| ||||||| ||||||||||||||||||| || |||||||    |||||| || | |||||  |   |||||||| ||||  || |    
T  10354482 ttgaacaaaatacttcataaattcccatcattttgaaaattcttcaaattatta----tccaaataagagaattcacctccaaatatttcaattttctca 10354387  T
Q  233 aaacattacattagctcaaaacattc-cttatccaaacacacccttggagt 282  Q
    ||||||||||||| ||||||||||||  ||||| |||||||| ||||||||    
T  10354386 aaacattacattacctcaaaacattcatttatctaaacacactcttggagt 10354336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 136 - 273
Target Start/End: Complemental strand, 41139610 - 41139478
Alignment:
Q  136 aacaaaatacttgataaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattcgacaaaaaatatttgaattccctaaaaa 235  Q
    |||||||||||| |||||||| ||||||||| ||||||||  | |||||||||||    ||||||| |||||  | |||| |||||||||| ||| ||||    
T  41139610 aacaaaatacttcataaattttcatcattttaaaaattctttaaattattatcca----aacaatagaattcacctaaaagtatttgaatttcctcaaaa 41139515  T
Q  236 cattacattagctcaaaacattccttatccaaacacac 273  Q
    |||||||||| |||||| | ||||  ||||||||||||    
T  41139514 cattacattacctcaaagc-ttccccatccaaacacac 41139478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 160 - 260
Target Start/End: Complemental strand, 1539754 - 1539658
Alignment:
Q  160 tcattttgaaaattctacatattattatccatccaaacaataaaattcgacaaaaaatatttgaattccctaaaaacattacattagctcaaaacattcc 259  Q
    ||||||||||||||||||| |||||||||||    |||||| ||||||  |  ||| |||||||||||||| |||||||||||||  |||||||||||||    
T  1539754 tcattttgaaaattctacaaattattatcca----aacaatgaaattcacctcaaagtatttgaattccctcaaaacattacattccctcaaaacattcc 1539659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 137 - 239
Target Start/End: Complemental strand, 56339269 - 56339171
Alignment:
Q  137 acaaaatacttgataaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattcgacaaaaaa-tatttgaattccctaaaaa 235  Q
    ||||||||||| ||||||||||||||||||||||||||| || |||||||||||    |||||| |||||| |||  ||| |||||||||||||| ||||    
T  56339269 acaaaatacttcataaatttccatcattttgaaaattcttcaaattattatcca----aacaatgaaattc-acatcaaagtatttgaattccctcaaaa 56339175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 133 - 239
Target Start/End: Complemental strand, 4490167 - 4490070
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattcgacaaaaaatatttgaattccctaa 232  Q
    ||||||||||||| | |||||||||||||||||||||||||||  | |||||||    |||||||||||||||||     ||||||||| |||||||| |    
T  4490167 ttgaacaaaatacatcataaatttccatcattttgaaaattctttaaattatta----tccaaacaataaaattc-----aaaatatttaaattccctca 4490077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 133 - 190
Target Start/End: Original strand, 46242477 - 46242534
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatcca 190  Q
    ||||||||||||||| ||||||||||||||||||||||||||| || |||||| ||||    
T  46242477 ttgaacaaaatacttcataaatttccatcattttgaaaattcttcaaattattctcca 46242534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 133 - 239
Target Start/End: Original strand, 52294978 - 52295080
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattcgacaaaaaatatttgaattccctaa 232  Q
    ||||||| ||||||| |||||||  |||||||||||||||||| || ||||||    ||||||||||| ||||||| |  ||||||||||||||||||      
T  52294978 ttgaacacaatacttcataaattctcatcattttgaaaattcttcaaattatt----atccaaacaatgaaattcgtctcaaaatatttgaattccctcg 52295073  T
Q  233 aaacatt 239  Q
    |||||||    
T  52295074 aaacatt 52295080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 136 - 244
Target Start/End: Complemental strand, 26534630 - 26534526
Alignment:
Q  136 aacaaaatacttgataaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattcgacaa-aaaatatttgaattccctaaaa 234  Q
    |||||||||||| || |||||| |||||||||||||||||  | |||||||    ||||||||||| ||||| |||| ||| |||||||||||||| |||    
T  26534630 aacaaaatacttcatgaatttctatcattttgaaaattcttgaaattatta----tccaaacaatagaattc-acaacaaagtatttgaattccctcaaa 26534536  T
Q  235 acattacatt 244  Q
    ||||||||||    
T  26534535 acattacatt 26534526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 133 - 207
Target Start/End: Original strand, 13318592 - 13318662
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattc 207  Q
    ||||||||||||||| |||| |||| ||||||||||||||||| || ||||||||||    ||||||||||||||    
T  13318592 ttgaacaaaatacttcataagtttctatcattttgaaaattcttcaaattattatcc----aaacaataaaattc 13318662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 213 - 285
Target Start/End: Complemental strand, 15660247 - 15660174
Alignment:
Q  213 aaaatatttgaattccctaaaaacattacattagctcaaaacatt-ccttatccaaacacacccttggagtttt 285  Q
    |||||| ||||||||||| |||||||||||||| ||||||| ||| || ||||||||||||| ||| |||||||    
T  15660247 aaaataattgaattccctcaaaacattacattacctcaaaatattcccctatccaaacacactcttagagtttt 15660174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 133 - 239
Target Start/End: Original strand, 40338185 - 40338287
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattcgacaaaaaatatttgaattccctaa 232  Q
    ||||| ||||||||| |||||||||||||||||||||||||||  | ||||||||||    ||||||| ||||||  |  ||| |||||||||||| | |    
T  40338185 ttgaataaaatacttcataaatttccatcattttgaaaattctgtaaattattatcc----aaacaatgaaattcacctcaaagtatttgaattccatca 40338280  T
Q  233 aaacatt 239  Q
    |||||||    
T  40338281 aaacatt 40338287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 133 - 273
Target Start/End: Complemental strand, 52494063 - 52493929
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattcgacaaaaaatatttgaattccctaa 232  Q
    ||||| ||||||||| |||| |||||||| |||| ||||||||  | |||||    |||||||||||  ||||||  | |||||||||| |||||||| |    
T  52494063 ttgaagaaaatacttcataa-tttccatccttttaaaaattctcaaaattat----catccaaacaacgaaattcacctaaaaatattttaattccctca 52493969  T
Q  233 aaacattacattagctcaaaacattccttatccaaacacac 273  Q
    || ||||||||||  ||||||||||||  ||||||||||||    
T  52493968 aa-cattacattacttcaaaacattccccatccaaacacac 52493929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 189 - 270
Target Start/End: Original strand, 9451117 - 9451199
Alignment:
Q  189 catccaaacaataaaattcgacaaaaaatatttgaattccctaaaaacattacattagctcaaaacattcctt-atccaaaca 270  Q
    ||||||||||||||||||   | |||| |||||||| || || |||||||||||||| || |||||||||||| |||||||||    
T  9451117 catccaaacaataaaatttagctaaaagtatttgaactctctcaaaacattacattaccttaaaacattccttcatccaaaca 9451199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 133 - 175
Target Start/End: Complemental strand, 16516312 - 16516270
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattct 175  Q
    ||||||||||||||| |||||||| ||||||||||||||||||    
T  16516312 ttgaacaaaatacttcataaattttcatcattttgaaaattct 16516270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 136 - 190
Target Start/End: Complemental strand, 17727202 - 17727148
Alignment:
Q  136 aacaaaatacttgataaatttccatcattttgaaaattctacatattattatcca 190  Q
    ||||||||||||  ||||||||||| |||||||||||||| || |||||||||||    
T  17727202 aacaaaatacttcgtaaatttccataattttgaaaattcttcaaattattatcca 17727148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 189 - 259
Target Start/End: Complemental strand, 31473937 - 31473867
Alignment:
Q  189 catccaaacaataaaattcgacaaaaaatatttgaattccctaaaaacattacattagctcaaaacattcc 259  Q
    |||||||||||||||||||  |  ||| |||||||||||||| | |||||||||||  |||||||||||||    
T  31473937 catccaaacaataaaattcacctcaaagtatttgaattccctcataacattacattccctcaaaacattcc 31473867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 136 - 190
Target Start/End: Original strand, 42776179 - 42776233
Alignment:
Q  136 aacaaaatacttgataaatttccatcattttgaaaattctacatattattatcca 190  Q
    |||||||||||| ||||||||| |||||||||||||| || || |||||||||||    
T  42776179 aacaaaatacttcataaatttctatcattttgaaaatgcttcaaattattatcca 42776233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 5715804 - 5715747
Alignment:
Q  217 tatttgaattccctaaaaacattacattagctcaaaacatt-ccttatccaaacacac 273  Q
    |||||||||| ||| |||||||||||||| ||||||||||| ||| ||||||||||||    
T  5715804 tatttgaattacctcaaaacattacattatctcaaaacattccctcatccaaacacac 5715747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 134 - 171
Target Start/End: Original strand, 29686010 - 29686047
Alignment:
Q  134 tgaacaaaatacttgataaatttccatcattttgaaaa 171  Q
    |||||||||||||| |||||||||||||||||||||||    
T  29686010 tgaacaaaatactttataaatttccatcattttgaaaa 29686047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 133 - 190
Target Start/End: Original strand, 40548151 - 40548208
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatcca 190  Q
    |||||||||||| ||  ||||||||||||||||||||||| || || |||||||||||    
T  40548151 ttgaacaaaatatttcctaaatttccatcattttgaaaatgcttcaaattattatcca 40548208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 133 - 190
Target Start/End: Original strand, 46243030 - 46243087
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatcca 190  Q
    ||||| |||||||||  ||||||||||||||||||||||||||  | |||||||||||    
T  46243030 ttgaataaaatacttcttaaatttccatcattttgaaaattctttaaattattatcca 46243087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 133 - 173
Target Start/End: Original strand, 27284595 - 27284635
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaatt 173  Q
    ||||||||||||||| |||||||||||||||||| ||||||    
T  27284595 ttgaacaaaatacttcataaatttccatcattttaaaaatt 27284635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 188 - 259
Target Start/End: Complemental strand, 10633121 - 10633050
Alignment:
Q  188 ccatccaaacaataaaattcgacaaaaaatatttgaattccctaaaaacattacattagctcaaaacattcc 259  Q
    ||||||||||||| ||||||  |  ||| |||||||||||||| | |||||||||||  |||||||||||||    
T  10633121 ccatccaaacaatgaaattcacctcaaagtatttgaattccctcataacattacattccctcaaaacattcc 10633050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 132 - 187
Target Start/End: Complemental strand, 17727069 - 17727014
Alignment:
Q  132 tttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattat 187  Q
    ||||||||||||| || |||||||| ||||||||| ||||||||  ||||||||||    
T  17727069 tttgaacaaaatatttcataaattttcatcattttaaaaattctttatattattat 17727014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 139 - 190
Target Start/End: Complemental strand, 31947725 - 31947674
Alignment:
Q  139 aaaatacttgataaatttccatcattttgaaaattctacatattattatcca 190  Q
    |||||||||  |||||||| ||||||||||||||||| || |||||||||||    
T  31947725 aaaatacttcgtaaatttctatcattttgaaaattcttcaaattattatcca 31947674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 213 - 259
Target Start/End: Complemental strand, 4896712 - 4896666
Alignment:
Q  213 aaaatatttgaattccctaaaaacattacattagctcaaaacattcc 259  Q
    |||||| ||||||||||| |||||||||||||| ||||||| |||||    
T  4896712 aaaataattgaattccctcaaaacattacattacctcaaaatattcc 4896666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 220 - 273
Target Start/End: Original strand, 15660285 - 15660339
Alignment:
Q  220 ttgaattccctaaaaacattacattagctcaaaacatt-ccttatccaaacacac 273  Q
    ||||||||||| |||||||||||||  ||||||||||| ||| ||||||||||||    
T  15660285 ttgaattccctcaaaacattacattccctcaaaacattccctcatccaaacacac 15660339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 133 - 187
Target Start/End: Complemental strand, 24705491 - 24705437
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattat 187  Q
    |||||||||||| || ||||||||| |||||||| |||||||| || ||||||||    
T  24705491 ttgaacaaaatatttcataaatttctatcattttaaaaattcttcaaattattat 24705437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 213 - 259
Target Start/End: Original strand, 49111407 - 49111453
Alignment:
Q  213 aaaatatttgaattccctaaaaacattacattagctcaaaacattcc 259  Q
    |||||| ||||||||||| |||||||||||||  |||||||||||||    
T  49111407 aaaatagttgaattccctcaaaacattacattccctcaaaacattcc 49111453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 149 - 190
Target Start/End: Original strand, 19461685 - 19461726
Alignment:
Q  149 ataaatttccatcattttgaaaattctacatattattatcca 190  Q
    |||||||||||||||| | |||||||| ||||||||||||||    
T  19461685 ataaatttccatcattctaaaaattctccatattattatcca 19461726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 273
Target Start/End: Complemental strand, 26250973 - 26250912
Alignment:
Q  213 aaaatatttgaattccctaaaaacattacattagctcaaaacatt-ccttatccaaacacac 273  Q
    |||||| ||||||| ||| |||||||||||||| ||||||| ||| ||| ||||||||||||    
T  26250973 aaaataattgaatttcctcaaaacattacattacctcaaaatattccctcatccaaacacac 26250912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 232 - 280
Target Start/End: Complemental strand, 12169064 - 12169016
Alignment:
Q  232 aaaacattacattagctcaaaacattccttatccaaacacacccttgga 280  Q
    |||||||||| ||  |||||||||||||||||||||| |||| ||||||    
T  12169064 aaaacattactttccctcaaaacattccttatccaaatacactcttgga 12169016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 135 - 187
Target Start/End: Original strand, 56118565 - 56118617
Alignment:
Q  135 gaacaaaatacttgataaatttccatcattttgaaaattctacatattattat 187  Q
    ||||||||||||| |||||||||||  |||||||||||| | || ||||||||    
T  56118565 gaacaaaatactttataaatttccactattttgaaaattattcaaattattat 56118617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 133 - 273
Target Start/End: Original strand, 4431 - 4568
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattcgacaaaaaatatttgaattccctaa 232  Q
    ||||||||||||||| |||||||||||||||||||||||| || || |||||||||||    ||||||  |||||  |  |||||||||||||| ||| |    
T  4431 ttgaacaaaatacttcataaatttccatcattttgaaaatgcttcaaattattatcca----aacaatggaattcaccccaaaatatttgaatttcctca 4526  T
Q  233 aaacattacattagctcaaaacatt-ccttatccaaacacac 273  Q
    |||||||| |||  ||||||||||| ||| ||||||||||||    
T  4527 aaacattatattccctcaaaacattccctcatccaaacacac 4568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 133 - 273
Target Start/End: Original strand, 5075 - 5212
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattcgacaaaaaatatttgaattccctaa 232  Q
    ||||||||||||||| |||||||||||||||||||||||| || || |||||||||||    ||||||  |||||  |  |||||||||||||| ||| |    
T  5075 ttgaacaaaatacttcataaatttccatcattttgaaaatgcttcaaattattatcca----aacaatggaattcaccccaaaatatttgaatttcctca 5170  T
Q  233 aaacattacattagctcaaaacatt-ccttatccaaacacac 273  Q
    |||||||| |||  ||||||||||| ||| ||||||||||||    
T  5171 aaacattatattccctcaaaacattccctcatccaaacacac 5212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 53; Significance: 3e-21; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 133 - 273
Target Start/End: Original strand, 53470361 - 53470498
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattcgacaaaaaatatttgaattccctaa 232  Q
    ||||||||||||||| |||||||||||||||||||||||| || || ||||||    ||||||||||| ||||||  |  ||| |||||||||||||| |    
T  53470361 ttgaacaaaatacttcataaatttccatcattttgaaaatgcttcaaattatt----atccaaacaatgaaattcaccccaaagtatttgaattccctca 53470456  T
Q  233 aaacattacattagctcaaaaca-ttccttatccaaacacac 273  Q
    ||||| || |||  ||||||||| ||||| ||||||||||||    
T  53470457 aaacaatagattccctcaaaacatttcctcatccaaacacac 53470498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 133 - 259
Target Start/End: Original strand, 50168542 - 50168664
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattcgacaaaaaatatttgaattccctaa 232  Q
    |||||||||| |||| || |||||||||| ||||||||||||| |||||||||||||    |||||||  |||||  | |||| ||||||| || ||| |    
T  50168542 ttgaacaaaaaacttcattaatttccatccttttgaaaattctccatattattatcc----aaacaatggaattcagctaaaattatttgagtttcctca 50168637  T
Q  233 aaacattacattagctcaaaacattcc 259  Q
    ||||||||||||| |||||||||||||    
T  50168638 aaacattacattacctcaaaacattcc 50168664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 133 - 273
Target Start/End: Original strand, 53129775 - 53129912
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattcgacaaaaaatatttgaattccctaa 232  Q
    ||||||||||||||| |||||||| ||||||||||||||| || || |||||||||||    ||||||  |||||  |  ||| |||||||||||||| |    
T  53129775 ttgaacaaaatacttcataaattttcatcattttgaaaatacttcaaattattatcca----aacaatggaattcaccccaaagtatttgaattccctta 53129870  T
Q  233 aaacattacattagctcaaaacatt-ccttatccaaacacac 273  Q
    ||||||||||||  ||| ||||||| ||| ||||||||||||    
T  53129871 aaacattacattccctcgaaacattccctcatccaaacacac 53129912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 132 - 259
Target Start/End: Complemental strand, 47767573 - 47767450
Alignment:
Q  132 tttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattcgacaaaaaatatttgaattcccta 231  Q
    |||||||||||||||| ||||||||||||||||||||||||||| || | ||||    |||||||||||  |||||  |  ||  |||||||||||| |     
T  47767573 tttgaacaaaatacttcataaatttccatcattttgaaaattcttcaaactatt----atccaaacaatgtaattcacctcaaggtatttgaattccttc 47767478  T
Q  232 aaaacattacattagctcaaaacattcc 259  Q
    |||||||||||||  |||||||||||||    
T  47767477 aaaacattacattccctcaaaacattcc 47767450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 133 - 190
Target Start/End: Complemental strand, 2104874 - 2104817
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatcca 190  Q
    ||||||||||||||| ||||||||||||||||||||||||||| || |||||||||||    
T  2104874 ttgaacaaaatacttcataaatttccatcattttgaaaattcttcaaattattatcca 2104817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 133 - 259
Target Start/End: Original strand, 21307464 - 21307586
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattcgacaaaaaatatttgaattccctaa 232  Q
    ||||| ||||||||| ||||||||| ||||||||||||||| |||| |||||||||||    ||||||  |||||  |  ||| |||||||||||||| |    
T  21307464 ttgaataaaatacttcataaatttctatcattttgaaaattttacaaattattatcca----aacaatggaattcacctcaaagtatttgaattccctca 21307559  T
Q  233 aaacattacattagctcaaaacattcc 259  Q
    ||||||||||||  | |||||||||||    
T  21307560 aaacattacattcccgcaaaacattcc 21307586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 132 - 273
Target Start/End: Complemental strand, 34088712 - 34088574
Alignment:
Q  132 tttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattcgacaaaaaatatttgaattcccta 231  Q
    |||||||||||||||| |||||||||||||||||||||||| || || ||||||    |||| ||||||  |||||  |  ||| ||||||||||||||     
T  34088712 tttgaacaaaatacttcataaatttccatcattttgaaaatgcttcaaattatt----atcctaacaatggaattcaccccaaagtatttgaattccctc 34088617  T
Q  232 aaaacattacattagctcaaaacattcct-tatccaaacacac 273  Q
    |||||| ||||||  ||||||||||| ||  ||||||||||||    
T  34088616 aaaacaatacattccctcaaaacatttctccatccaaacacac 34088574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 133 - 190
Target Start/End: Original strand, 35279854 - 35279911
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatcca 190  Q
    ||||||||||||||| ||||||||||||||||||||||||||| || |||||||||||    
T  35279854 ttgaacaaaatacttcataaatttccatcattttgaaaattcttcaaattattatcca 35279911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 133 - 259
Target Start/End: Original strand, 36397921 - 36398043
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattcgacaaaaaatatttgaattccctaa 232  Q
    ||||||||||||||| |||||||||||||||||||||||| || || ||||||    |||| ||||||  |||||  |  ||| |||||||||||||| |    
T  36397921 ttgaacaaaatacttcataaatttccatcattttgaaaatgcttcaaattatt----atccgaacaatggaattcaccccaaagtatttgaattccctca 36398016  T
Q  233 aaacattacattagctcaaaacattcc 259  Q
    ||||| ||||||  |||||||||||||    
T  36398017 aaacaatacattccctcaaaacattcc 36398043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 133 - 273
Target Start/End: Complemental strand, 7302486 - 7302349
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattcgacaaaaaatatttgaattccctaa 232  Q
    ||||||||||||||| ||||||||||||||||||||||||||| || | ||||    |||||||||||  |||||  |  ||  ||| |||||||| | |    
T  7302486 ttgaacaaaatacttcataaatttccatcattttgaaaattcttcaaactatt----atccaaacaatggaattcacctcaaggtatctgaattccttca 7302391  T
Q  233 aaacattacattagctcaaaacatt-ccttatccaaacacac 273  Q
    ||||||||||||  ||||||||||| ||| ||||||||||||    
T  7302390 aaacattacattctctcaaaacattccctcatccaaacacac 7302349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 133 - 189
Target Start/End: Complemental strand, 26547155 - 26547099
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatcc 189  Q
    ||||||||||||||| ||||||||||||||||||||||||||| || ||||||||||    
T  26547155 ttgaacaaaatacttcataaatttccatcattttgaaaattcttcaaattattatcc 26547099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 133 - 258
Target Start/End: Complemental strand, 48947745 - 48947624
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattcgacaaaaaatatttgaattccctaa 232  Q
    ||||||||||||||| |||||||||||||||||||||||| || || |||||||||||    ||||||  |||||  |  ||| ||||||||||| || |    
T  48947745 ttgaacaaaatacttcataaatttccatcattttgaaaatgcttcaaattattatcca----aacaatggaattcaccccaaagtatttgaattctctca 48947650  T
Q  233 aaacattacattagctcaaaacattc 258  Q
    ||||| ||||||  ||||||||||||    
T  48947649 aaacaatacattccctcaaaacattc 48947624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 133 - 187
Target Start/End: Original strand, 38506808 - 38506862
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattat 187  Q
    ||||||||||||||| ||||||||||||||||||||||||||| || ||||||||    
T  38506808 ttgaacaaaatactttataaatttccatcattttgaaaattcttcaaattattat 38506862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 133 - 259
Target Start/End: Original strand, 671551 - 671673
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattcgacaaaaaatatttgaattccctaa 232  Q
    ||||||||||||||| |||||||||||||||||||||||| || || ||||||    | |||||||||  |||||  |  ||| ||| |||||||||| |    
T  671551 ttgaacaaaatacttcataaatttccatcattttgaaaatgcttcaaattatt----acccaaacaatggaattcaccccaaagtatctgaattccctca 671646  T
Q  233 aaacattacattagctcaaaacattcc 259  Q
    ||||| ||||||  |||||||||||||    
T  671647 aaacaatacattccctcaaaacattcc 671673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 133 - 190
Target Start/End: Complemental strand, 26323496 - 26323439
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatcca 190  Q
    ||||||||||||||| |||||||||||||||||||||||| ||| | |||||||||||    
T  26323496 ttgaacaaaatacttcataaatttccatcattttgaaaatcctataaattattatcca 26323439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 133 - 259
Target Start/End: Complemental strand, 37054534 - 37054412
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattcgacaaaaaatatttgaattccctaa 232  Q
    ||||||||||||||| ||||||||||||||||||||||||||| || | ||||    | ||||||||| ||||||  |  ||  |||||||||||| | |    
T  37054534 ttgaacaaaatacttcataaatttccatcattttgaaaattcttcaaactatt----acccaaacaatgaaattcacctcaaggtatttgaattccttca 37054439  T
Q  233 aaacattacattagctcaaaacattcc 259  Q
    ||||||||||||  || ||||||||||    
T  37054438 aaacattacattcccttaaaacattcc 37054412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 133 - 190
Target Start/End: Original strand, 43863883 - 43863940
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatcca 190  Q
    ||||||||||||||| |||||||||||||||||||||||| || || |||||||||||    
T  43863883 ttgaacaaaatacttcataaatttccatcattttgaaaatgcttcaaattattatcca 43863940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 133 - 190
Target Start/End: Complemental strand, 46706792 - 46706735
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatcca 190  Q
    ||||| ||||||||| ||||||||||||||||||||||||||| || |||||||||||    
T  46706792 ttgaaaaaaatacttcataaatttccatcattttgaaaattcttcaaattattatcca 46706735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 133 - 257
Target Start/End: Complemental strand, 47337021 - 47336901
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattcgacaaaaaatatttgaattccctaa 232  Q
    ||||||||||||||| ||||||||| |||||||| ||||||||| | |||||    ||||||||||||  |||||  | ||| |||||| ||||  || |    
T  47337021 ttgaacaaaatacttcataaatttctatcatttttaaaattctataaattat----catccaaacaatggaattcacctaaacatatttaaattatctca 47336926  T
Q  233 aaacattacattagctcaaaacatt 257  Q
    ||||||||||||| || ||||||||    
T  47336925 aaacattacattaccttaaaacatt 47336901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 133 - 187
Target Start/End: Original strand, 47284135 - 47284189
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattat 187  Q
    ||||| ||||||||| ||||||||||||||||||||||||||| || ||||||||    
T  47284135 ttgaataaaatacttcataaatttccatcattttgaaaattcttcaaattattat 47284189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 133 - 190
Target Start/End: Complemental strand, 7976688 - 7976631
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatcca 190  Q
    ||||||||||||||| |||||||||||||||||| ||||||||  | |||||||||||    
T  7976688 ttgaacaaaatacttcataaatttccatcattttaaaaattctttaaattattatcca 7976631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 133 - 259
Target Start/End: Complemental strand, 30766693 - 30766571
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattcgacaaaaaatatttgaattccctaa 232  Q
    ||||||||||||||| ||||||||| ||| ||||||||||||| || | ||||    |||||||||||  |||||  |  ||  |||||||||||| | |    
T  30766693 ttgaacaaaatacttcataaatttctatctttttgaaaattcttcaaactatt----atccaaacaatggaattcacctcaaggtatttgaattccttca 30766598  T
Q  233 aaacattacattagctcaaaacattcc 259  Q
    ||||||||||||  |||||||||||||    
T  30766597 aaacattacattccctcaaaacattcc 30766571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 133 - 259
Target Start/End: Original strand, 42005885 - 42006007
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattcgacaaaaaatatttgaattccctaa 232  Q
    ||||||||||||||| |||||||| |||||||||||||||||| || | ||||    | ||||||||| ||||||  |  ||  ||||| |||||| | |    
T  42005885 ttgaacaaaatacttcataaattttcatcattttgaaaattcttcaaactatt----acccaaacaatgaaattcacctcaaggtatttaaattccttca 42005980  T
Q  233 aaacattacattagctcaaaacattcc 259  Q
    ||||||||||||  |||||||||||||    
T  42005981 aaacattacattccctcaaaacattcc 42006007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 139 - 186
Target Start/End: Complemental strand, 30767239 - 30767192
Alignment:
Q  139 aaaatacttgataaatttccatcattttgaaaattctacatattatta 186  Q
    ||||||||| ||||||||||||||||||||||||||| || |||||||    
T  30767239 aaaatacttcataaatttccatcattttgaaaattcttcaaattatta 30767192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 133 - 184
Target Start/End: Complemental strand, 52527176 - 52527125
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattat 184  Q
    ||||||||||||||| |||||||||||| |||||||||||||| || |||||    
T  52527176 ttgaacaaaatacttcataaatttccattattttgaaaattcttcaaattat 52527125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 133 - 187
Target Start/End: Original strand, 6836991 - 6837045
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattat 187  Q
    ||||||||||| ||| ||||||||| ||||||||||||||||| || ||||||||    
T  6836991 ttgaacaaaatgcttcataaatttctatcattttgaaaattcttcaaattattat 6837045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 133 - 260
Target Start/End: Original strand, 44288391 - 44288514
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattcgacaaaaaatatttgaattccctaa 232  Q
    ||||||||||||||| |||||||| ||  ||||| || ||||| || |||||    |||||||| |||  ||||||   |||| |||||||||||| | |    
T  44288391 ttgaacaaaatacttcataaattttcaatattttaaagattctccaaattat----catccaaataatgtaattcgttcaaaagtatttgaattccatca 44288486  T
Q  233 aaacattacattagctcaaaacattcct 260  Q
    |||||||| |||| ||||||||||||||    
T  44288487 aaacattatattacctcaaaacattcct 44288514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 212 - 273
Target Start/End: Complemental strand, 46635922 - 46635860
Alignment:
Q  212 aaaaatatttgaattccctaaaaacattacattagctcaaaaca-ttccttatccaaacacac 273  Q
    |||| |||||||||| ||| |||||||||||||||||||||||| || || ||||||||||||    
T  46635922 aaaagtatttgaatttcctcaaaacattacattagctcaaaacattttctcatccaaacacac 46635860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 133 - 175
Target Start/End: Complemental strand, 55460480 - 55460438
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattct 175  Q
    |||||||||||||||  ||||||||||||||||||||||||||    
T  55460480 ttgaacaaaatacttcgtaaatttccatcattttgaaaattct 55460438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 213 - 273
Target Start/End: Original strand, 47284321 - 47284382
Alignment:
Q  213 aaaatatttgaattccctaaaaacattacattagctcaaaacattc-cttatccaaacacac 273  Q
    |||||| ||||||||||| |||||||||||||| ||||||| |||| || ||||||||||||    
T  47284321 aaaataattgaattccctcaaaacattacattacctcaaaatattctctcatccaaacacac 47284382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 137 - 187
Target Start/End: Complemental strand, 31021816 - 31021765
Alignment:
Q  137 acaaaatacttgataaatttccatcattttg-aaaattctacatattattat 187  Q
    ||||||||||| ||||||||||||||||||| |||||||| || ||||||||    
T  31021816 acaaaatacttcataaatttccatcattttgaaaaattcttcaaattattat 31021765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 136 - 187
Target Start/End: Complemental strand, 46635983 - 46635932
Alignment:
Q  136 aacaaaatacttgataaatttccatcattttgaaaattctacatattattat 187  Q
    |||||||| ||| |||||||| |||||||||||||||||| || ||||||||    
T  46635983 aacaaaatgcttcataaattttcatcattttgaaaattctccaaattattat 46635932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 220 - 273
Target Start/End: Original strand, 9129446 - 9129500
Alignment:
Q  220 ttgaattccctaaaaacattacattagctcaaaacatt-ccttatccaaacacac 273  Q
    ||||||||||| |||||||||||||  ||||||||||| ||| ||||||||||||    
T  9129446 ttgaattccctcaaaacattacattccctcaaaacattccctcatccaaacacac 9129500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 220 - 273
Target Start/End: Original strand, 9137553 - 9137607
Alignment:
Q  220 ttgaattccctaaaaacattacattagctcaaaacatt-ccttatccaaacacac 273  Q
    ||||||||||| |||||||||||||  ||||||||||| ||| ||||||||||||    
T  9137553 ttgaattccctcaaaacattacattccctcaaaacattccctcatccaaacacac 9137607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 220 - 273
Target Start/End: Complemental strand, 39110451 - 39110397
Alignment:
Q  220 ttgaattccctaaaaacattacattagctcaaaacattcctt-atccaaacacac 273  Q
    ||||||||||  ||||||||||||| |||||||||||| ||| ||||||||||||    
T  39110451 ttgaattcccacaaaacattacattcgctcaaaacatttcttcatccaaacacac 39110397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 220 - 273
Target Start/End: Original strand, 44692924 - 44692978
Alignment:
Q  220 ttgaattccctaaaaacattacattagctcaaaacattcct-tatccaaacacac 273  Q
    ||||||||||| |||||||||||||  ||||||||||||||  ||||||||||||    
T  44692924 ttgaattccctcaaaacattacattccctcaaaacattcctccatccaaacacac 44692978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 258
Target Start/End: Original strand, 31070501 - 31070546
Alignment:
Q  213 aaaatatttgaattccctaaaaacattacattagctcaaaacattc 258  Q
    |||||| ||||||||||| |||||||||||||| ||||||| ||||    
T  31070501 aaaataattgaattccctcaaaacattacattacctcaaaatattc 31070546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 258
Target Start/End: Original strand, 31189409 - 31189450
Alignment:
Q  217 tatttgaattccctaaaaacattacattagctcaaaacattc 258  Q
    ||||||||||| || |||||||||||||| ||||||||||||    
T  31189409 tatttgaattctctcaaaacattacattacctcaaaacattc 31189450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 31 - 60
Target Start/End: Original strand, 33145308 - 33145337
Alignment:
Q  31 tttaaaaatattataacaatatagattgaa 60  Q
    ||||||||||||||||||||||||||||||    
T  33145308 tttaaaaatattataacaatatagattgaa 33145337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 273
Target Start/End: Original strand, 46429491 - 46429552
Alignment:
Q  213 aaaatatttgaattccctaaaaacattacattagctcaaaacatt-ccttatccaaacacac 273  Q
    |||||| ||||||||| | |||||||||||||| ||||||| ||| ||| ||||||||||||    
T  46429491 aaaataattgaattccttcaaaacattacattacctcaaaatattccctcatccaaacacac 46429552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 133 - 173
Target Start/End: Complemental strand, 21731041 - 21731001
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaatt 173  Q
    |||||||||||| || |||||||||||||||||| ||||||    
T  21731041 ttgaacaaaatagttcataaatttccatcattttaaaaatt 21731001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 28 - 60
Target Start/End: Original strand, 27055869 - 27055901
Alignment:
Q  28 aattttaaaaatattataacaatatagattgaa 60  Q
    |||||||||||||||||||||| ||||||||||    
T  27055869 aattttaaaaatattataacaacatagattgaa 27055901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 220 - 268
Target Start/End: Complemental strand, 31070463 - 31070415
Alignment:
Q  220 ttgaattccctaaaaacattacattagctcaaaacattccttatccaaa 268  Q
    ||||||||||| |||||||||||||  |||||||||||||  |||||||    
T  31070463 ttgaattccctcaaaacattacattccctcaaaacattccccatccaaa 31070415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 133 - 169
Target Start/End: Original strand, 34396442 - 34396478
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaa 169  Q
    ||||||||||||||| ||||||| |||||||||||||    
T  34396442 ttgaacaaaatacttcataaattcccatcattttgaa 34396478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 133 - 173
Target Start/End: Complemental strand, 36636022 - 36635982
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaatt 173  Q
    ||||||||||| ||| |||||||||||||||||| ||||||    
T  36636022 ttgaacaaaatccttcataaatttccatcattttaaaaatt 36635982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 29 - 57
Target Start/End: Original strand, 42178827 - 42178855
Alignment:
Q  29 attttaaaaatattataacaatatagatt 57  Q
    |||||||||||||||||||||||||||||    
T  42178827 attttaaaaatattataacaatatagatt 42178855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 28 - 60
Target Start/End: Original strand, 44412120 - 44412152
Alignment:
Q  28 aattttaaaaatattataacaatatagattgaa 60  Q
    |||||||||||||||||||||| ||||||||||    
T  44412120 aattttaaaaatattataacaacatagattgaa 44412152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 28 - 60
Target Start/End: Complemental strand, 46017321 - 46017289
Alignment:
Q  28 aattttaaaaatattataacaatatagattgaa 60  Q
    |||||||||||||||||||||| ||||||||||    
T  46017321 aattttaaaaatattataacaacatagattgaa 46017289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 132 - 180
Target Start/End: Complemental strand, 46199285 - 46199237
Alignment:
Q  132 tttgaacaaaatacttgataaatttccatcattttgaaaattctacata 180  Q
    |||| ||||||||||| ||||||||| |||||||| |||||||| ||||    
T  46199285 tttggacaaaatactttataaatttcaatcattttaaaaattcttcata 46199237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 52; Significance: 1e-20; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 133 - 273
Target Start/End: Complemental strand, 14378 - 14242
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattcgacaaaaaatatttgaattccctaa 232  Q
    |||||||| |||||| |||||||||||||||||||||||| || || ||||||||| |    |||||| ||||||  |  ||| |||||||||||||| |    
T  14378 ttgaacaagatacttcataaatttccatcattttgaaaatacttcaaattattatcta----aacaatgaaattcaccccaaagtatttgaattccctta 14283  T
Q  233 aaacattacattagctcaaaacattccttatccaaacacac 273  Q
    ||||||||||||  ||| |||||||||  ||||||||||||    
T  14282 aaacattacattccctccaaacattccccatccaaacacac 14242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 133 - 259
Target Start/End: Complemental strand, 8049394 - 8049272
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattcgacaaaaaatatttgaattccctaa 232  Q
    ||||||||||||||| ||||||||| ||||||||||||||||| || |||||||||||    |||||| |||||   |  ||| |||||||||||||| |    
T  8049394 ttgaacaaaatacttcataaatttcaatcattttgaaaattcttcaaattattatcca----aacaatgaaatttacctcaaagtatttgaattccctca 8049299  T
Q  233 aaacattacattagctcaaaacattcc 259  Q
    |||||||| |||  |||||||||||||    
T  8049298 aaacattatattccctcaaaacattcc 8049272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 133 - 259
Target Start/End: Original strand, 29257294 - 29257416
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattcgacaaaaaatatttgaattccctaa 232  Q
    ||||||||||||||| |||||||||||||||||||||||| || || |||||||||||    ||||||  |||||  |  ||| |||||||||||||| |    
T  29257294 ttgaacaaaatacttcataaatttccatcattttgaaaatgcttcaaattattatcca----aacaatggaattcaccccaaagtatttgaattccctta 29257389  T
Q  233 aaacattacattagctcaaaacattcc 259  Q
    ||||| ||||||  |||||||||||||    
T  29257390 aaacaatacattccctcaaaacattcc 29257416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 132 - 278
Target Start/End: Original strand, 31976524 - 31976666
Alignment:
Q  132 tttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattcgacaaaaaatatttgaattcccta 231  Q
    |||||| ||||||||| ||||||||||||||||||||||||||| || ||||||    ||||||||||| ||||||  |  |||||||||||||| |||     
T  31976524 tttgaataaaatacttcataaatttccatcattttgaaaattcttcaaattatt----atccaaacaatgaaattcatctcaaaatatttgaatttcctc 31976619  T
Q  232 aaaacattacattagctcaaaacattccttatccaaacacacccttg 278  Q
    ||| ||||||||||  |||||| || ||  ||||||| |||| ||||    
T  31976620 aaagcattacattacttcaaaatatcccccatccaaaaacactcttg 31976666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 133 - 245
Target Start/End: Original strand, 31980426 - 31980534
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattcgacaaaaaatatttgaattccctaa 232  Q
    ||||||||||||||| |||||||||||||||||||||||| |  || ||||||    ||||||| ||| ||||||  |  |||||||||||||||||| |    
T  31980426 ttgaacaaaatacttcataaatttccatcattttgaaaatacatcaaattatt----atccaaataatgaaattcaccccaaaatatttgaattccctta 31980521  T
Q  233 aaacattacatta 245  Q
    |||||||||||||    
T  31980522 aaacattacatta 31980534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 136 - 259
Target Start/End: Original strand, 44346624 - 44346743
Alignment:
Q  136 aacaaaatacttgataaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattcgacaaaaaatatttgaattccctaaaaa 235  Q
    |||||||||||| |||||||||||||||||||||||| || || |||||||||||    ||||||  |||||  |  ||| |||||||||||||| ||||    
T  44346624 aacaaaatacttcataaatttccatcattttgaaaatgcttcaaattattatcca----aacaatggaattcaccccaaagtatttgaattcccttaaaa 44346719  T
Q  236 cattacattagctcaaaacattcc 259  Q
    || ||||||  |||||||||||||    
T  44346720 caatacattccctcaaaacattcc 44346743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 133 - 259
Target Start/End: Original strand, 29482750 - 29482872
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattcgacaaaaaatatttgaattccctaa 232  Q
    ||||||||||||||| |||||||||||||||||||||||| || || |||||||||||    ||||||  |||||  |  ||| |||||||||||||| |    
T  29482750 ttgaacaaaatacttcataaatttccatcattttgaaaatgcttcaaattattatcca----aacaatggaattcaccccaaagtatttgaattccctca 29482845  T
Q  233 aaacattacattagctcaaaacattcc 259  Q
    ||||| ||| ||  |||||||||||||    
T  29482846 aaacaatacgttccctcaaaacattcc 29482872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 133 - 273
Target Start/End: Complemental strand, 24045100 - 24044963
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattcgacaaaaaatatttgaattccctaa 232  Q
    ||||||||||||||| ||||||||||||||||||||||||||| || | ||||    | |||||||||  |||||  |  ||  |||||||||||| | |    
T  24045100 ttgaacaaaatacttcataaatttccatcattttgaaaattcttcaaactatt----acccaaacaatggaattcacctcaaggtatttgaattccttca 24045005  T
Q  233 aaacattacattagctcaaaacatt-ccttatccaaacacac 273  Q
    ||||||||||||  ||||||||||| ||| ||||||||||||    
T  24045004 aaacattacattccctcaaaacattccctcatccaaacacac 24044963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 133 - 273
Target Start/End: Original strand, 28324605 - 28324742
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattcgacaaaaaatatttgaattccctaa 232  Q
    ||||||||||||| | ||||||||||||||||||||||||||| || | ||||    |||||||||||  |||||  |  ||  |||||||||||| | |    
T  28324605 ttgaacaaaatacctcataaatttccatcattttgaaaattcttcaaactatt----atccaaacaatgtaattcagctcaaggtatttgaattccttca 28324700  T
Q  233 aaacattacattagctcaaaacattcct-tatccaaacacac 273  Q
    ||||||||||||  ||||||||||||||  ||||||||||||    
T  28324701 aaacattacattccctcaaaacattcctccatccaaacacac 28324742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 138 - 273
Target Start/End: Complemental strand, 44889489 - 44889357
Alignment:
Q  138 caaaatacttgataaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattcgaca-aaaaatatttgaattccctaaaaac 236  Q
    |||||||||| |||||||| ||||||| ||||||||||||| |||||||    ||||||||||  ||||| |||  ||| |||||||||||||| |||||    
T  44889489 caaaatacttcataaattttcatcattatgaaaattctacaaattatta----tccaaacaatggaattc-acatcaaagtatttgaattccctcaaaac 44889395  T
Q  237 attacattagctcaaaacattcct-tatccaaacacac 273  Q
    |||| |||  ||||||||||||||  ||||||||||||    
T  44889394 attatattccctcaaaacattcctccatccaaacacac 44889357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 133 - 188
Target Start/End: Complemental strand, 6416324 - 6416269
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatc 188  Q
    ||||||||||||||| ||||||||||||||||||||||||||| || |||||||||    
T  6416324 ttgaacaaaatacttcataaatttccatcattttgaaaattcttcaaattattatc 6416269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 133 - 257
Target Start/End: Original strand, 15186760 - 15186880
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattcgacaaaaaatatttgaattccctaa 232  Q
    ||||||||||||||| |||||||||||||| ||||||||||||   | | ||||| || |||||||||| |||||  |  ||| ||||||||||  || |    
T  15186760 ttgaacaaaatacttcataaatttccatcaatttgaaaattct---tttaattat-cacccaaacaatagaattcaccttaaactatttgaatttactca 15186855  T
Q  233 aaacattacattagctcaaaacatt 257  Q
    ||||||||||||| |||||||||||    
T  15186856 aaacattacattatctcaaaacatt 15186880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 133 - 271
Target Start/End: Complemental strand, 9982776 - 9982642
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattcgacaaaaaatatttgaattccctaa 232  Q
    ||||||||||||||| |||||||| ||||||||| |||||||| || ||||||    ||| |||||||  |||||  |  ||||||||| ||||| || |    
T  9982776 ttgaacaaaatacttcataaattttcatcattttaaaaattcttcaaattatt----atctaaacaatggaattcacctcaaaatatttaaattctctca 9982681  T
Q  233 aaacattacattagctcaaaacattccttatccaaacac 271  Q
    ||||||||||||| || |||||||||   ||||||||||    
T  9982680 aaacattacattaccttaaaacattctccatccaaacac 9982642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 133 - 239
Target Start/End: Original strand, 26520382 - 26520484
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattcgacaaaaaatatttgaattccctaa 232  Q
    ||||| ||||||||| ||||||||||||||||||||||||||| || |||||||||||    ||||||  |||||  |  ||| |||||||||||||| |    
T  26520382 ttgaataaaatacttcataaatttccatcattttgaaaattcttcaaattattatcca----aacaatggaattcacctcaaagtatttgaattccctca 26520477  T
Q  233 aaacatt 239  Q
    |||||||    
T  26520478 aaacatt 26520484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 133 - 259
Target Start/End: Original strand, 33377240 - 33377362
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattcgacaaaaaatatttgaattccctaa 232  Q
    |||||||||||||||  ||||||||||||||||||||||| || || |||||||||||    ||||||  |||||  |  ||| |||||||||||||| |    
T  33377240 ttgaacaaaatacttcgtaaatttccatcattttgaaaatgcttcaaattattatcca----aacaatggaattcaccccaaagtatttgaattccctca 33377335  T
Q  233 aaacattacattagctcaaaacattcc 259  Q
    ||||| || |||  |||||||||||||    
T  33377336 aaacaatatattccctcaaaacattcc 33377362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 133 - 259
Target Start/End: Complemental strand, 33986144 - 33986022
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattcgacaaaaaatatttgaattccctaa 232  Q
    |||| |||||||||| || |||||||||||||||||||||||| || ||||||||| |    |||||| ||||||  |  ||| ||||||||||| || |    
T  33986144 ttgaccaaaatacttcatgaatttccatcattttgaaaattcttcaaattattatcta----aacaatgaaattcacctcaaagtatttgaattctctca 33986049  T
Q  233 aaacattacattagctcaaaacattcc 259  Q
    |||||||||||||  |||| |||||||    
T  33986048 aaacattacattacttcaagacattcc 33986022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 133 - 190
Target Start/End: Complemental strand, 34008921 - 34008864
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatcca 190  Q
    ||||||||||||||| |||||||||||||||||||||||||||  | |||||||||||    
T  34008921 ttgaacaaaatacttcataaatttccatcattttgaaaattctttaaattattatcca 34008864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 133 - 188
Target Start/End: Original strand, 36625168 - 36625223
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatc 188  Q
    |||| |||||||||| ||||||||||||||||||||||||||| || |||||||||    
T  36625168 ttgatcaaaatacttcataaatttccatcattttgaaaattcttcaaattattatc 36625223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 133 - 188
Target Start/End: Original strand, 40734044 - 40734099
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatc 188  Q
    ||||||||||||||| |||||||||||||||||||||||| || || |||||||||    
T  40734044 ttgaacaaaatacttcataaatttccatcattttgaaaatgcttcaaattattatc 40734099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 133 - 260
Target Start/End: Original strand, 1088220 - 1088343
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattcgacaaaaaatatttgaattccctaa 232  Q
    ||||||||||||||| ||||||||| |||||||||||||| ||  | ||||||    |||||||||||  ||||   |  |||||||||||||| ||| |    
T  1088220 ttgaacaaaatacttcataaatttctatcattttgaaaatgcttgaaattatt----atccaaacaatggaatttaccccaaaatatttgaatttcctca 1088315  T
Q  233 aaacattacattagctcaaaacattcct 260  Q
    ||||| ||||||  ||||||||||||||    
T  1088316 aaacaatacattctctcaaaacattcct 1088343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 133 - 244
Target Start/End: Complemental strand, 13144723 - 13144616
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattcgacaaaaaatatttgaattccctaa 232  Q
    ||||||||||||||| |||||||  |||||||||||||||||| || |||||||||||    ||||||  |||||  |  ||| |||||||||||||| |    
T  13144723 ttgaacaaaatacttcataaattctcatcattttgaaaattcttcaaattattatcca----aacaatggaattcacctcaaagtatttgaattccctca 13144628  T
Q  233 aaacattacatt 244  Q
     |||||||||||    
T  13144627 taacattacatt 13144616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 136 - 187
Target Start/End: Original strand, 24510223 - 24510274
Alignment:
Q  136 aacaaaatacttgataaatttccatcattttgaaaattctacatattattat 187  Q
    |||||||||||| |||||||||||||||||| |||||||| || ||||||||    
T  24510223 aacaaaatacttcataaatttccatcattttaaaaattcttcaaattattat 24510274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 213 - 259
Target Start/End: Original strand, 40046885 - 40046931
Alignment:
Q  213 aaaatatttgaattccctaaaaacattacattagctcaaaacattcc 259  Q
    |||||| ||||||||||| |||||||||||||| |||||||||||||    
T  40046885 aaaataattgaattccctcaaaacattacattacctcaaaacattcc 40046931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 133 - 190
Target Start/End: Complemental strand, 34388647 - 34388590
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatcca 190  Q
    ||||||||||||||| |||||||||||||||||| ||| ||||  | |||||||||||    
T  34388647 ttgaacaaaatacttcataaatttccatcattttaaaagttctttaaattattatcca 34388590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 136 - 245
Target Start/End: Complemental strand, 15718334 - 15718229
Alignment:
Q  136 aacaaaatacttgataaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattcgacaaaaaatatttgaattccctaaaaa 235  Q
    |||||||| |||  ||||||| |||||||||||||| ||| || ||||     |||||||| ||| || |||| |  ||||||||||||||| |||||||    
T  15718334 aacaaaatccttcctaaattttcatcattttgaaaactcttcaaattaa----catccaaaaaatgaagttcgccttaaaatatttgaattcactaaaaa 15718239  T
Q  236 cattacatta 245  Q
    ||||||||||    
T  15718238 cattacatta 15718229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 136 - 188
Target Start/End: Original strand, 43167672 - 43167724
Alignment:
Q  136 aacaaaatacttgataaatttccatcattttgaaaattctacatattattatc 188  Q
    |||||||||||| |||||||| || ||||||||||||||| || |||||||||    
T  43167672 aacaaaatacttcataaattttcaacattttgaaaattcttcaaattattatc 43167724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 133 - 175
Target Start/End: Original strand, 6460829 - 6460871
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattct 175  Q
    |||||||||||| || |||||||||||||||||||||| ||||    
T  6460829 ttgaacaaaataattcataaatttccatcattttgaaatttct 6460871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 193 - 259
Target Start/End: Original strand, 13404902 - 13404968
Alignment:
Q  193 caaacaataaaattcgacaaaaaatatttgaattccctaaaaacattacattagctcaaaacattcc 259  Q
    |||||||||||||||  |  ||| || ||||||||||| |||||||||||||  |||||||||||||    
T  13404902 caaacaataaaattcatctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcc 13404968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 220 - 273
Target Start/End: Complemental strand, 33902724 - 33902670
Alignment:
Q  220 ttgaattccctaaaaacattacattagctcaaaacattcct-tatccaaacacac 273  Q
    ||||||||||| |||||||||||||  ||||||||||||||  ||||||||||||    
T  33902724 ttgaattccctcaaaacattacattccctcaaaacattcctccatccaaacacac 33902670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 133 - 190
Target Start/End: Complemental strand, 10593211 - 10593154
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatcca 190  Q
    |||||||||||| || ||||| ||  ||||||||||||||||| || |||||||||||    
T  10593211 ttgaacaaaatatttcataaagtttaatcattttgaaaattcttcaaattattatcca 10593154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 273
Target Start/End: Complemental strand, 13404891 - 13404830
Alignment:
Q  213 aaaatatttgaattccctaaaaacattacattagctcaaaaca-ttccttatccaaacacac 273  Q
    |||||| ||||||||||| |||||||||||||| ||||||| | ||||  ||||||||||||    
T  13404891 aaaataattgaattccctcaaaacattacattacctcaaaatatttccccatccaaacacac 13404830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 36103161 - 36103104
Alignment:
Q  217 tatttgaattccctaaaaacattacattagctcaaaacattcct-tatccaaacacac 273  Q
    |||||||||| ||| |||||||||||||  ||||||||||||||  ||||||||||||    
T  36103161 tatttgaatttccttaaaacattacattccctcaaaacattcctccatccaaacacac 36103104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 273
Target Start/End: Original strand, 37268102 - 37268163
Alignment:
Q  213 aaaatatttgaattccctaaaaacattacattagctcaaaacatt-ccttatccaaacacac 273  Q
    |||||| || |||||||| |||||||||||||| ||||||| ||| || |||||||||||||    
T  37268102 aaaataattaaattccctcaaaacattacattacctcaaaatattcccctatccaaacacac 37268163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 158 - 239
Target Start/End: Complemental strand, 29611485 - 29611408
Alignment:
Q  158 catcattttgaaaattctacatattattatccatccaaacaataaaattcgacaaaaaatatttgaattccctaaaaacatt 239  Q
    |||||||||||||||||| || |||||||    |||||||||| ||||||  |  ||| |||||||||||||| ||||||||    
T  29611485 catcattttgaaaattcttcaaattatta----tccaaacaatgaaattcacctcaaagtatttgaattccctcaaaacatt 29611408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 214 - 273
Target Start/End: Complemental strand, 31807471 - 31807412
Alignment:
Q  214 aaatatttgaattccctaaaaacattacattagctcaaaacattc-cttatccaaacacac 273  Q
    ||||| ||||||||||| |||||||||||||  |||||||||||| || ||||||||||||    
T  31807471 aaatagttgaattccctcaaaacattacatt-cctcaaaacattctctcatccaaacacac 31807412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 52; Significance: 1e-20; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 133 - 273
Target Start/End: Complemental strand, 35379482 - 35379347
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattcgacaaaaaatatttgaattccctaa 232  Q
    ||||||||||||||| ||||||||||| |||||||||||| || || |||||    ||||||| |||||||||||     |||  ||||||||||||| |    
T  35379482 ttgaacaaaatacttcataaatttccaccattttgaaaat-cttcaaattat----catccaatcaataaaattcacttcaaagaatttgaattccctca 35379388  T
Q  233 aaacattacattagctcaaaacattccttatccaaacacac 273  Q
    ||||||||||||| |||||||||||||  ||||||||||||    
T  35379387 aaacattacattatctcaaaacattccccatccaaacacac 35379347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 133 - 259
Target Start/End: Original strand, 41762145 - 41762267
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattcgacaaaaaatatttgaattccctaa 232  Q
    ||||||||||||||| |||||||||||||||||||||||| || || |||||||||||    ||||||  |||||  |  ||| |||||||||||||| |    
T  41762145 ttgaacaaaatacttcataaatttccatcattttgaaaatgcttcaaattattatcca----aacaatggaattcaccccaaagtatttgaattccctta 41762240  T
Q  233 aaacattacattagctcaaaacattcc 259  Q
    ||||| ||||||  |||||||||||||    
T  41762241 aaacaatacattccctcaaaacattcc 41762267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 133 - 244
Target Start/End: Complemental strand, 30519143 - 30519037
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattcgacaaaaaatatttgaattccctaa 232  Q
    ||||||||||||||| ||||||| ||||||||||||||||||| || |||||||||||    |||| ||||||||  |  |||||||||||||||||| |    
T  30519143 ttgaacaaaatacttcataaattcccatcattttgaaaattcttcaaattattatcca----aaca-taaaattcaccgcaaaatatttgaattccctca 30519049  T
Q  233 aaacattacatt 244  Q
     |||||||||||    
T  30519048 taacattacatt 30519037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 133 - 244
Target Start/End: Complemental strand, 30559483 - 30559377
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattcgacaaaaaatatttgaattccctaa 232  Q
    ||||||||||||||| ||||||| ||||||||||||||||||| || |||||||||||    |||| ||||||||  |  |||||||||||||||||| |    
T  30559483 ttgaacaaaatacttcataaattcccatcattttgaaaattcttcaaattattatcca----aaca-taaaattcaccgcaaaatatttgaattccctca 30559389  T
Q  233 aaacattacatt 244  Q
     |||||||||||    
T  30559388 taacattacatt 30559377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 133 - 259
Target Start/End: Original strand, 9894252 - 9894374
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattcgacaaaaaatatttgaattccctaa 232  Q
    ||||||||||||||| ||||||| ||||||||||||||||||| || |||||||||||    ||||||  |||||  |  ||| ||||||||||||||      
T  9894252 ttgaacaaaatacttcataaattcccatcattttgaaaattcttcaaattattatcca----aacaatggaattcacctcaaagtatttgaattccctgg 9894347  T
Q  233 aaacattacattagctcaaaacattcc 259  Q
     |||||||||||  |||||||||||||    
T  9894348 taacattacattccctcaaaacattcc 9894374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 136 - 257
Target Start/End: Complemental strand, 10314786 - 10314669
Alignment:
Q  136 aacaaaatacttgataaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattcgacaa-aaaatatttgaattccctaaaa 234  Q
    |||||||||||| |||||||| |||||||||||||||||| || |||||||||||    ||||||| ||||| |||  |||||||||||||||||| |||    
T  10314786 aacaaaatacttcataaattttcatcattttgaaaattcttcaaattattatcca----aacaatagaattc-acatcaaaatatttgaattcccttaaa 10314692  T
Q  235 acattacattagctcaaaacatt 257  Q
    | ||||||||   ||||||||||    
T  10314691 atattacatttcttcaaaacatt 10314669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 133 - 259
Target Start/End: Original strand, 22303800 - 22303922
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattcgacaaaaaatatttgaattccctaa 232  Q
    ||||||||||||||| ||||||||||||||||||||||||||| || | ||||    | ||||||||| ||||||  |  ||  |||||||||||| | |    
T  22303800 ttgaacaaaatacttcataaatttccatcattttgaaaattcttcaaactatt----acccaaacaatgaaattcacctcaaggtatttgaattccttca 22303895  T
Q  233 aaacattacattagctcaaaacattcc 259  Q
    ||||||||||||  |||||||||||||    
T  22303896 aaacattacattccctcaaaacattcc 22303922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 133 - 258
Target Start/End: Complemental strand, 14834964 - 14834843
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattcgacaaaaaatatttgaattccctaa 232  Q
    ||||| ||||||||| |||||||| |||||||||||||||||| || |||||||    |||||||||| ||||||  |  ||| |||||| ||||||| |    
T  14834964 ttgaaaaaaatacttcataaattttcatcattttgaaaattcttcaaattatta----tccaaacaatgaaattcacctcaaagtatttggattccctta 14834869  T
Q  233 aaacattacattagctcaaaacattc 258  Q
    ||||||||||||  ||| ||||||||    
T  14834868 aaacattacattccctcgaaacattc 14834843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 133 - 244
Target Start/End: Original strand, 37241528 - 37241639
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattcgacaaaaaatatttgaattccctaa 232  Q
    ||||||||||||||| ||||||||||||||||||||||||||| || | |||||||||  |||| |    |||||  |  ||| |||||||||||||| |    
T  37241528 ttgaacaaaatacttcataaatttccatcattttgaaaattcttcaaaatattatccaaacaaatagatcaattcagctcaaagtatttgaattccctca 37241627  T
Q  233 aaacattacatt 244  Q
    ||||||||||||    
T  37241628 aaacattacatt 37241639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 133 - 190
Target Start/End: Complemental strand, 22305234 - 22305177
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatcca 190  Q
    ||||| ||||||||| |||||||||| ||||||||||||||||||| |||||||||||    
T  22305234 ttgaataaaatacttcataaatttccttcattttgaaaattctacaaattattatcca 22305177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 133 - 190
Target Start/End: Complemental strand, 33146313 - 33146256
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatcca 190  Q
    ||||||||||||||| |||||||||||||||||||||||||||  | |||||||||||    
T  33146313 ttgaacaaaatacttcataaatttccatcattttgaaaattctttaaattattatcca 33146256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 133 - 273
Target Start/End: Complemental strand, 927441 - 927305
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattcgacaaaaaatatttgaattccctaa 232  Q
    ||||||||||||||| |||||||||||| ||||||||||| || || |||||||||||    ||||||  |||||  |  ||| |||||||||||||| |    
T  927441 ttgaacaaaatacttcataaatttccat-attttgaaaatgcttcaaattattatcca----aacaatggaattcaccccaaagtatttgaattccctca 927347  T
Q  233 aaacattacattagctcaaaaca-ttccttatccaaacacac 273  Q
    ||||| ||||||  ||||||||| ||||  ||||||||||||    
T  927346 aaacaatacattccctcaaaacatttccccatccaaacacac 927305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 133 - 188
Target Start/End: Complemental strand, 12480047 - 12479992
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatc 188  Q
    ||||||||||||||| || |||||||||||||||||||||||| || |||||||||    
T  12480047 ttgaacaaaatacttcatgaatttccatcattttgaaaattcttcaaattattatc 12479992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 133 - 273
Target Start/End: Original strand, 32250028 - 32250164
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattcgacaaaaaatatttgaattccctaa 232  Q
    ||||| ||||||||| ||||||| |||||||||| ||||||||  | |||||||||||    ||||||  |||||  |  ||  |||||||||||||| |    
T  32250028 ttgaataaaatacttcataaattaccatcattttaaaaattctttaaattattatcca----aacaatggaattcatctcaaggtatttgaattccctca 32250123  T
Q  233 aaacattacattagctcaaaacattccttatccaaacacac 273  Q
    ||||||||| ||  |||||||||||||  ||||||||||||    
T  32250124 aaacattactttccctcaaaacattccccatccaaacacac 32250164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 133 - 187
Target Start/End: Original strand, 15270784 - 15270838
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattat 187  Q
    ||||| ||||||||| ||||||||||||||||||||| |||||||| ||||||||    
T  15270784 ttgaataaaatacttcataaatttccatcattttgaatattctacaaattattat 15270838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 133 - 175
Target Start/End: Original strand, 40089747 - 40089789
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattct 175  Q
    ||||||||||||||| |||||||||||||||||||||||||||    
T  40089747 ttgaacaaaatacttcataaatttccatcattttgaaaattct 40089789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 150 - 259
Target Start/End: Complemental strand, 22767075 - 22766970
Alignment:
Q  150 taaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattcgacaaaaaatatttgaattccctaaaaacattacattagctc 249  Q
    ||||||||||||||| ||||||||||  | |||||||||||    ||||||| |||||  |  ||| |||||||||||||| ||||||||| |||  |||    
T  22767075 taaatttccatcattctgaaaattctttaaattattatcca----aacaatagaattcaccttaaagtatttgaattccctcaaaacattatattccctc 22766980  T
Q  250 aaaacattcc 259  Q
    ||||||||||    
T  22766979 aaaacattcc 22766970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 136 - 244
Target Start/End: Complemental strand, 35111363 - 35111259
Alignment:
Q  136 aacaaaatacttgataaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattcgaca-aaaaatatttgaattccctaaaa 234  Q
    |||||||||||| |||||||| ||||||||||||| |||| || |||||||    ||||||||||| || || |||  |||||||||||||||| | |||    
T  35111363 aacaaaatacttcataaattttcatcattttgaaagttcttcaaattatta----tccaaacaatagaactc-acatcaaaatatttgaattccttcaaa 35111269  T
Q  235 acattacatt 244  Q
    ||||||||||    
T  35111268 acattacatt 35111259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 133 - 188
Target Start/End: Complemental strand, 8264648 - 8264593
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatc 188  Q
    ||||| ||||||||| ||||||||||||||||||| ||||||| || |||||||||    
T  8264648 ttgaataaaatacttcataaatttccatcattttggaaattcttcaaattattatc 8264593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 139 - 190
Target Start/End: Original strand, 17493101 - 17493152
Alignment:
Q  139 aaaatacttgataaatttccatcattttgaaaattctacatattattatcca 190  Q
    ||||||||| ||||||||||||||||||||||||||| || ||||| |||||    
T  17493101 aaaatactttataaatttccatcattttgaaaattctccaaattatcatcca 17493152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 139 - 190
Target Start/End: Complemental strand, 22302656 - 22302605
Alignment:
Q  139 aaaatacttgataaatttccatcattttgaaaattctacatattattatcca 190  Q
    ||||||||| ||||||||||||||||||||||| ||| || |||||||||||    
T  22302656 aaaatacttcataaatttccatcattttgaaaaatcttcaaattattatcca 22302605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 133 - 175
Target Start/End: Original strand, 9894082 - 9894124
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattct 175  Q
    ||||||||||||||| ||||||| |||||||||||||||||||    
T  9894082 ttgaacaaaatacttcataaattcccatcattttgaaaattct 9894124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 133 - 175
Target Start/End: Original strand, 17542291 - 17542333
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattct 175  Q
    ||||||||||||||| |||||||||||||||||| ||||||||    
T  17542291 ttgaacaaaatacttcataaatttccatcattttaaaaattct 17542333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 188 - 273
Target Start/End: Original strand, 19533888 - 19533974
Alignment:
Q  188 ccatccaaacaataaaattcgacaaaaaatatttgaattccctaaaaacattacattagctcaaaacattcct-tatccaaacacac 273  Q
    ||||||||||||| ||||||  |  ||| |||||||||||||| | |||||||||||  ||||||||||||||  ||||||||||||    
T  19533888 ccatccaaacaatgaaattcacctcaaagtatttgaattccctcataacattacattccctcaaaacattcctccatccaaacacac 19533974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 136 - 190
Target Start/End: Complemental strand, 34105208 - 34105154
Alignment:
Q  136 aacaaaatacttgataaatttccatcattttgaaaattctacatattattatcca 190  Q
    ||||||||||||  |||||||| ||||||||||||||||| || |||||||||||    
T  34105208 aacaaaatacttcgtaaatttctatcattttgaaaattcttcaaattattatcca 34105154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 140 - 190
Target Start/End: Original strand, 37241047 - 37241097
Alignment:
Q  140 aaatacttgataaatttccatcattttgaaaattctacatattattatcca 190  Q
    |||||||| |||||||||||||||||| |||||||| || |||||||||||    
T  37241047 aaatacttcataaatttccatcattttaaaaattcttcaaattattatcca 37241097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 137 - 238
Target Start/End: Original strand, 17492582 - 17492679
Alignment:
Q  137 acaaaatacttgataaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattcgacaaaaaatatttgaattccctaaaaac 236  Q
    |||||||||||  ||||||| |||||||||||||||||| || |||||    ||||||||||||  |||||  |  ||| |||||||||||||| |||||    
T  17492582 acaaaatacttcttaaattttcatcattttgaaaattcttcaaattat----catccaaacaatggaattcacctcaaattatttgaattccctcaaaac 17492677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 245
Target Start/End: Complemental strand, 8255113 - 8255059
Alignment:
Q  190 atccaaacaataaaattcgacaaaaaatatttgaattccctaaaaacattacatta 245  Q
    ||||||||||| |||||| ||  |||||||||||||||||| ||||||||||||||    
T  8255113 atccaaacaatgaaattc-acctaaaatatttgaattccctcaaaacattacatta 8255059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 133 - 273
Target Start/End: Complemental strand, 11601178 - 11601043
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattcgacaaaaaatatttgaattccctaa 232  Q
    ||||||||||||||| | ||||| |||  |||||||||||||| || |||||    |||||||| ||||||||||  |  ||| |||||||||||| | |    
T  11601178 ttgaacaaaatacttcagaaatt-ccacaattttgaaaattcttcaaattat----catccaaataataaaattcacctcaaattatttgaattccttca 11601084  T
Q  233 aaacattacattagctcaaaacattccttatccaaacacac 273  Q
    |||||||| |||| || |||| |||| | || |||||||||    
T  11601083 aaacattatattaccttaaaatattcatcattcaaacacac 11601043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 133 - 188
Target Start/End: Complemental strand, 28489603 - 28489548
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatc 188  Q
    ||||||||| ||||| |||||||||||||||||| ||||||||  | |||||||||    
T  28489603 ttgaacaaactacttcataaatttccatcattttaaaaattctttaaattattatc 28489548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 159 - 273
Target Start/End: Complemental strand, 37090395 - 37090284
Alignment:
Q  159 atcattttgaaaattctacatattattatccatccaaacaataaaattcgaca-aaaaatatttgaattccctaaaaacattacattagctcaaaacatt 257  Q
    ||||||||||||||||| |||  |||||||||    ||||||  ||||| ||| ||||||||||||||| ||| |||||||  ||||| |||||||||||    
T  37090395 atcattttgaaaattctccatgctattatcca----aacaatggaattc-acataaaaatatttgaatttcctcaaaacatcgcattacctcaaaacatt 37090301  T
Q  258 cct-tatccaaacacac 273  Q
    | | |||||||||||||    
T  37090300 cttctatccaaacacac 37090284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 220 - 273
Target Start/End: Complemental strand, 3563334 - 3563280
Alignment:
Q  220 ttgaattccctaaaaacattacattagctcaaaacatt-ccttatccaaacacac 273  Q
    ||||||||||| |||||||||||||  ||||||||||| || |||||||||||||    
T  3563334 ttgaattccctcaaaacattacattccctcaaaacattcccctatccaaacacac 3563280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 137 - 171
Target Start/End: Original strand, 17444364 - 17444398
Alignment:
Q  137 acaaaatacttgataaatttccatcattttgaaaa 171  Q
    ||||||||||| |||||||||||||||||||||||    
T  17444364 acaaaatacttcataaatttccatcattttgaaaa 17444398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 133 - 190
Target Start/End: Original strand, 6772143 - 6772200
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatcca 190  Q
    ||||||||||||||| ||||||||||||| |||||| |||| | || ||||| |||||    
T  6772143 ttgaacaaaatacttcataaatttccatcgttttgataattattcaaattatcatcca 6772200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 57
Target Start/End: Original strand, 9621906 - 9621935
Alignment:
Q  28 aattttaaaaatattataacaatatagatt 57  Q
    ||||||||||||||||||||||||||||||    
T  9621906 aattttaaaaatattataacaatatagatt 9621935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 273
Target Start/End: Original strand, 28828442 - 28828503
Alignment:
Q  213 aaaatatttgaattccctaaaaacattacattagctcaaaaca-ttccttatccaaacacac 273  Q
    |||||| ||||||||||| |||||||||||||| ||||||| | ||||  ||||||||||||    
T  28828442 aaaataattgaattccctcaaaacattacattacctcaaaatatttccccatccaaacacac 28828503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 259
Target Start/End: Original strand, 40643913 - 40643958
Alignment:
Q  214 aaatatttgaattccctaaaaacattacattagctcaaaacattcc 259  Q
    ||||| ||||||||||| |||||||||||||  |||||||||||||    
T  40643913 aaatagttgaattccctcaaaacattacattccctcaaaacattcc 40643958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 150 - 190
Target Start/End: Complemental strand, 28490115 - 28490075
Alignment:
Q  150 taaatttccatcattttgaaaattctacatattattatcca 190  Q
    |||||||||||||||||||||||||  || |||||||||||    
T  28490115 taaatttccatcattttgaaaattcctcaaattattatcca 28490075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 28 - 60
Target Start/End: Original strand, 37508355 - 37508387
Alignment:
Q  28 aattttaaaaatattataacaatatagattgaa 60  Q
    |||||||||||||||||||||| ||||||||||    
T  37508355 aattttaaaaatattataacaacatagattgaa 37508387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0318 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 133 - 259
Target Start/End: Complemental strand, 3006 - 2885
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattcgacaaaaaatatttgaattccctaa 232  Q
    |||||||||||| || ||||||||||||||||||||||||||| || |||||||    ||||||||||  ||||| ||   ||||||||||||||||| |    
T  3006 ttgaacaaaatatttcataaatttccatcattttgaaaattcttcaaattatta----tccaaacaatggaattc-acctcaaatatttgaattccctca 2912  T
Q  233 aaacattacattagctcaaaacattcc 259  Q
    ||||||||||||  ||| |||||||||    
T  2911 aaacattacattctctcgaaacattcc 2885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 50; Significance: 2e-19; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 140 - 273
Target Start/End: Complemental strand, 1368610 - 1368480
Alignment:
Q  140 aaatacttgataaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattcgacaaaaaatatttgaattccctaaaaacatt 239  Q
    ||||| || |||||||||||||||||||||||| || ||||||||||    ||||||||||| |||||  |  |||| ||||||||||||| |||| |||    
T  1368610 aaatatttcataaatttccatcattttgaaaatccttcatattatta----tccaaacaatagaattcacctcaaaacatttgaattcccttaaaatatt 1368515  T
Q  240 acattagctcaaaacattcct-tatccaaacacac 273  Q
    |||||  ||||||||||||||  ||||||||||||    
T  1368514 acattctctcaaaacattcctccatccaaacacac 1368480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 133 - 239
Target Start/End: Complemental strand, 8475301 - 8475199
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattcgacaaaaaatatttgaattccctaa 232  Q
    ||||||||||||||| |||||||||||||||||||||||| || || |||||||||||    ||||||  |||||  | |||| |||||||||||||| |    
T  8475301 ttgaacaaaatacttcataaatttccatcattttgaaaatgcttcaaattattatcca----aacaatggaattcacccaaaagtatttgaattccctca 8475206  T
Q  233 aaacatt 239  Q
    |||||||    
T  8475205 aaacatt 8475199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 140 - 273
Target Start/End: Complemental strand, 28918298 - 28918168
Alignment:
Q  140 aaatacttgataaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattcgacaaaaaatatttgaattccctaaaaacatt 239  Q
    ||||| || |||||||||||||||||||||||| || || |||||||||||    |||||| ||||||  |  ||| |||||||||| ||| ||||||||    
T  28918298 aaatatttcataaatttccatcattttgaaaatccttcaaattattatcca----aacaatgaaattcacctcaaagtatttgaatttccttaaaacatt 28918203  T
Q  240 acattagctcaaaacattcct-tatccaaacacac 273  Q
    |||||  ||||||||||||||  ||||||||||||    
T  28918202 acattccctcaaaacattcctccatccaaacacac 28918168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 133 - 271
Target Start/End: Original strand, 26901697 - 26901831
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattcgacaaaaaatatttgaattccctaa 232  Q
    ||||||||||||||| ||||||||| |||||||| |||||||| || |  ||||||| ||| |||||| ||||||  | |||| |||||||||||||| |    
T  26901697 ttgaacaaaatacttcataaatttctatcattttaaaaattct-caaa--attatcc-tccgaacaatgaaattcacctaaaattatttgaattccctca 26901792  T
Q  233 aaacattacattagctcaaaacattccttatccaaacac 271  Q
    ||| ||||||||| || | || |||||| ||||||||||    
T  26901793 aaatattacattacctaagaatattcctaatccaaacac 26901831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 133 - 190
Target Start/End: Complemental strand, 31413041 - 31412984
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatcca 190  Q
    |||||| |||||||| ||||||||||||||||||||||||||| || |||||||||||    
T  31413041 ttgaactaaatacttcataaatttccatcattttgaaaattcttcaaattattatcca 31412984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 133 - 188
Target Start/End: Complemental strand, 1195473 - 1195418
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatc 188  Q
    ||||||||||||||| |||||||||||| |||||||||||||| || |||||||||    
T  1195473 ttgaacaaaatacttcataaatttccataattttgaaaattcttcaaattattatc 1195418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 137 - 255
Target Start/End: Original strand, 6358188 - 6358302
Alignment:
Q  137 acaaaatacttgataaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattcgacaaaaaatatttgaattccctaaaaac 236  Q
    ||||||| ||| |||||||||||| |||||||||||||| || ||||||    || | ||||||| |||||  || ||| ||||| ||||| || |||||    
T  6358188 acaaaatgcttaataaatttccattattttgaaaattcttcaaattatt----attctaacaatagaattcaccacaaagtatttaaattctctcaaaac 6358283  T
Q  237 attacattagctcaaaaca 255  Q
    ||||||||| |||||||||    
T  6358284 attacattacctcaaaaca 6358302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 133 - 174
Target Start/End: Complemental strand, 9697602 - 9697561
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattc 174  Q
    ||||||||||||||| |||||||| |||||||||||||||||    
T  9697602 ttgaacaaaatacttcataaattttcatcattttgaaaattc 9697561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 133 - 190
Target Start/End: Original strand, 15616294 - 15616351
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatcca 190  Q
    ||||||||||||||| |||||||| ||||||||| ||||||||  | |||||||||||    
T  15616294 ttgaacaaaatacttcataaatttgcatcattttaaaaattctttaaattattatcca 15616351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 34244993 - 34245050
Alignment:
Q  217 tatttgaattccctaaaaacattacattagctcaaaacattcct-tatccaaacacac 273  Q
    |||||||||||||| |||||||||||||  ||||||||||||||  ||||||||||||    
T  34244993 tatttgaattccctcaaaacattacattccctcaaaacattcctccatccaaacacac 34245050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 215 - 273
Target Start/End: Original strand, 9763109 - 9763168
Alignment:
Q  215 aatatttgaattccctaaaaacattacattagctcaaaacattcct-tatccaaacacac 273  Q
    |||| ||||||||||| |||||||||||||| ||||||| ||||||  ||||||||||||    
T  9763109 aataattgaattccctcaaaacattacattacctcaaaatattcctccatccaaacacac 9763168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 136 - 195
Target Start/End: Original strand, 29395455 - 29395514
Alignment:
Q  136 aacaaaatacttgataaatttccatcattttgaaaattctacatattattatccatccaa 195  Q
    ||||||||||||  ||||| |||||||||||||||||||| || ||||| ||||| ||||    
T  29395455 aacaaaatacttcgtaaatctccatcattttgaaaattctccaaattatcatccaaccaa 29395514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 133 - 190
Target Start/End: Complemental strand, 10105179 - 10105122
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatcca 190  Q
    ||||| ||||||||| ||| |||||||||||||| ||||| || || |||||||||||    
T  10105179 ttgaataaaatacttcatacatttccatcattttaaaaatgcttcaaattattatcca 10105122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 29889447 - 29889504
Alignment:
Q  217 tatttgaattccctaaaaacattacattagctcaaaacattcct-tatccaaacacac 273  Q
    |||||||||||||| |||||||||||||   |||||||||||||  ||||||||||||    
T  29889447 tatttgaattccctcaaaacattacattccatcaaaacattcctccatccaaacacac 29889504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 28 - 60
Target Start/End: Original strand, 4909880 - 4909912
Alignment:
Q  28 aattttaaaaatattataacaatatagattgaa 60  Q
    |||||||||||||||||||||| ||||||||||    
T  4909880 aattttaaaaatattataacaacatagattgaa 4909912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 220 - 260
Target Start/End: Complemental strand, 15299456 - 15299416
Alignment:
Q  220 ttgaattccctaaaaacattacattagctcaaaacattcct 260  Q
    |||||||| || ||||||||||||| |||||||||||||||    
T  15299456 ttgaattctctcaaaacattacattcgctcaaaacattcct 15299416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 220 - 272
Target Start/End: Original strand, 15299527 - 15299579
Alignment:
Q  220 ttgaattccctaaaaacattacattagctcaaaacattccttatccaaacaca 272  Q
    ||||||||| | |||||||||||||  |||||||||||||  |||||||||||    
T  15299527 ttgaattccttcaaaacattacattccctcaaaacattccccatccaaacaca 15299579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 29 - 57
Target Start/End: Original strand, 32549770 - 32549798
Alignment:
Q  29 attttaaaaatattataacaatatagatt 57  Q
    |||||||||||||||||||||||||||||    
T  32549770 attttaaaaatattataacaatatagatt 32549798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 50; Significance: 2e-19; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 133 - 259
Target Start/End: Complemental strand, 769176 - 769054
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattcgacaaaaaatatttgaattccctaa 232  Q
    ||||||||||||||| |||||||||||||||||||||||| || || |||||||||||    ||||||  |||||  |  ||| |||||||||||||| |    
T  769176 ttgaacaaaatacttcataaatttccatcattttgaaaatgcttcaaattattatcca----aacaatggaattcaccccaaagtatttgaattccctta 769081  T
Q  233 aaacattacattagctcaaaacattcc 259  Q
    ||||| ||||||  |||||||||||||    
T  769080 aaacaatacattccctcaaaacattcc 769054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 133 - 259
Target Start/End: Original strand, 1583742 - 1583864
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattcgacaaaaaatatttgaattccctaa 232  Q
    ||||||||||||||| |||||||||||||||||||||||| || || |||||||||||    ||||||  |||||  |  ||| |||||||||||||| |    
T  1583742 ttgaacaaaatacttcataaatttccatcattttgaaaatacttcaaattattatcca----aacaatggaattcaccccaaagtatttgaattccctta 1583837  T
Q  233 aaacattacattagctcaaaacattcc 259  Q
    ||||| ||||||  |||||||||||||    
T  1583838 aaacaatacattccctcaaaacattcc 1583864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 133 - 259
Target Start/End: Complemental strand, 11141445 - 11141323
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattcgacaaaaaatatttgaattccctaa 232  Q
    ||||||||||||||| |||||||||||||||||||||||| || || |||||||||||    ||||||  |||||  |  ||| |||||||||||||| |    
T  11141445 ttgaacaaaatacttcataaatttccatcattttgaaaatacttcaaattattatcca----aacaatgtaattcaccccaaagtatttgaattccctta 11141350  T
Q  233 aaacattacattagctcaaaacattcc 259  Q
    ||||| ||||||  |||||||||||||    
T  11141349 aaacaatacattccctcaaaacattcc 11141323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 133 - 259
Target Start/End: Original strand, 33189190 - 33189312
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattcgacaaaaaatatttgaattccctaa 232  Q
    ||||||||||||||| |||||||||||||||||||||||| || || |||||||||||    ||||||  |||||  |  ||| |||||||||||||| |    
T  33189190 ttgaacaaaatacttcataaatttccatcattttgaaaatgcttcaaattattatcca----aacaatggaattcaccccaaagtatttgaattccctta 33189285  T
Q  233 aaacattacattagctcaaaacattcc 259  Q
    ||||| ||||||  |||||||||||||    
T  33189286 aaacaatacattccctcaaaacattcc 33189312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 133 - 190
Target Start/End: Complemental strand, 6749297 - 6749240
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatcca 190  Q
    ||||||||||||||| ||||||||||||||||||||||||||| || |||||||||||    
T  6749297 ttgaacaaaatacttcataaatttccatcattttgaaaattcttcaaattattatcca 6749240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 133 - 259
Target Start/End: Complemental strand, 30698421 - 30698299
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattcgacaaaaaatatttgaattccctaa 232  Q
    ||||||||||||||| | ||||||||||||||||||||||||| || | ||||    ||||||||||| ||||||  |  ||  |||||||||||| | |    
T  30698421 ttgaacaaaatacttcacaaatttccatcattttgaaaattcttcaaactatt----atccaaacaatgaaattcacctcaaggtatttgaattccttca 30698326  T
Q  233 aaacattacattagctcaaaacattcc 259  Q
    ||||||||||||  |||||||||||||    
T  30698325 aaacattacattccctcaaaacattcc 30698299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 133 - 190
Target Start/End: Complemental strand, 44255774 - 44255717
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatcca 190  Q
    ||||||||||||||| ||||||||||||||||||||||||||| || |||||||||||    
T  44255774 ttgaacaaaatacttcataaatttccatcattttgaaaattcttcaaattattatcca 44255717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 133 - 257
Target Start/End: Complemental strand, 28740736 - 28740616
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattcgaca-aaaaatatttgaattcccta 231  Q
    ||||||||||||||| ||||||||||||||||||||||||||| || |||||    |||| |||||||  ||||  |||  ||| ||||||||||||||     
T  28740736 ttgaacaaaatacttcataaatttccatcattttgaaaattcttcaaattat----catctaaacaatggaatt-tacatcaaagtatttgaattccctc 28740642  T
Q  232 aaaacattacattagctcaaaacatt 257  Q
    |||||||||||||  |||||||||||    
T  28740641 aaaacattacattccctcaaaacatt 28740616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 133 - 257
Target Start/End: Complemental strand, 740844 - 740724
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattcgacaaaaaatatttgaattccctaa 232  Q
    ||||||||||||||| |||||||||||| |||||||||||||| || |||||    ||| |||||||||||||||  |  |||  || ||||||| |  |    
T  740844 ttgaacaaaatacttcataaatttccattattttgaaaattcttcaaattat----cattcaaacaataaaattcacctcaaatgatatgaattctcaca 740749  T
Q  233 aaacattacattagctcaaaacatt 257  Q
    ||||||||||||| |||||||||||    
T  740748 aaacattacattatctcaaaacatt 740724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 133 - 257
Target Start/End: Complemental strand, 39630364 - 39630245
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattcgacaaaaaatatttgaattccctaa 232  Q
    ||||||||||||||| ||||||||||||||||||||||||  | || |||||||    ||||||||||| |||||  |   ||||||||||||||||| |    
T  39630364 ttgaacaaaatacttcataaatttccatcattttgaaaatagttcaaattatta----tccaaacaatagaattc-ccctcaaatatttgaattccctca 39630270  T
Q  233 aaacattacattagctcaaaacatt 257  Q
    ||||| ||||||  |||||||||||    
T  39630269 aaacaatacattccctcaaaacatt 39630245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 133 - 244
Target Start/End: Original strand, 7167600 - 7167707
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattcgacaaaaaatatttgaattccctaa 232  Q
    ||||||||||||||| ||||||||||||||||||||||||||| || | ||||    | ||||||||| ||||||  |  ||| |||||||||||| | |    
T  7167600 ttgaacaaaatacttcataaatttccatcattttgaaaattcttcaaactatt----acccaaacaatgaaattcacctcaaagtatttgaattccttca 7167695  T
Q  233 aaacattacatt 244  Q
    ||||||||||||    
T  7167696 aaacattacatt 7167707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 133 - 190
Target Start/End: Original strand, 7227945 - 7228002
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatcca 190  Q
    ||||||||||||||| ||||||||||||||||||||||||||| || | |||||||||    
T  7227945 ttgaacaaaatacttcataaatttccatcattttgaaaattcttcaaactattatcca 7228002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 133 - 190
Target Start/End: Original strand, 7309696 - 7309753
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatcca 190  Q
    ||||||||||||||| |||||||||||||||||||||||| || || |||||||||||    
T  7309696 ttgaacaaaatacttcataaatttccatcattttgaaaatgcttcaaattattatcca 7309753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 133 - 190
Target Start/End: Original strand, 8736374 - 8736431
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatcca 190  Q
    ||||||||||||||| |||||||||||||||||||||||||||  | |||||||||||    
T  8736374 ttgaacaaaatacttcataaatttccatcattttgaaaattctttaaattattatcca 8736431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 133 - 255
Target Start/End: Complemental strand, 11036482 - 11036364
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattcgacaaaaaatatttgaattccctaa 232  Q
    ||||||||||||||| |||||||||||||||||| |||||||| || ||||||    || | || ||||||||||  |  ||  |||||||||||| | |    
T  11036482 ttgaacaaaatacttcataaatttccatcattttaaaaattcttcaaattatt----attctaataataaaattcatctcaatgtatttgaattccttta 11036387  T
Q  233 aaacattacattagctcaaaaca 255  Q
    ||||||||||||||| |||||||    
T  11036386 aaacattacattagcacaaaaca 11036364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 133 - 259
Target Start/End: Original strand, 35047612 - 35047734
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattcgacaaaaaatatttgaattccctaa 232  Q
    ||||||||||||||| |||||||||||| ||||||||||| || || ||||||    ||||||||| |  |||||  |  ||| |||||||||||||| |    
T  35047612 ttgaacaaaatactttataaatttccattattttgaaaatgcttcaaattatt----atccaaacattggaattcaccccaaagtatttgaattccctta 35047707  T
Q  233 aaacattacattagctcaaaacattcc 259  Q
    ||||| ||||||  |||||||||||||    
T  35047708 aaacaatacatttcctcaaaacattcc 35047734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 133 - 190
Target Start/End: Original strand, 45094404 - 45094461
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatcca 190  Q
    ||||||||||||||| ||||||||||||||||||||||||||| || ||| |||||||    
T  45094404 ttgaacaaaatacttcataaatttccatcattttgaaaattcttcaaattcttatcca 45094461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 136 - 239
Target Start/End: Original strand, 41585626 - 41585725
Alignment:
Q  136 aacaaaatacttgataaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattcgacaaaaaatatttgaattccctaaaaa 235  Q
    |||||||||||| |||||||||||||||||| |||||||| || |||||||||||    ||||||||| |||     ||| |||||||||||||| ||||    
T  41585626 aacaaaatacttcataaatttccatcattttaaaaattcttcaaattattatcca----aacaataaatttcacttcaaagtatttgaattccctcaaaa 41585721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 137 - 190
Target Start/End: Original strand, 7611825 - 7611878
Alignment:
Q  137 acaaaatacttgataaatttccatcattttgaaaattctacatattattatcca 190  Q
    ||||||||||| ||||||||||||||||||||||||||| || ||| |||||||    
T  7611825 acaaaatacttcataaatttccatcattttgaaaattcttcaaattcttatcca 7611878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 133 - 227
Target Start/End: Complemental strand, 12263566 - 12263476
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattcgacaaaaaatatttgaattc 227  Q
    ||||||||||||||| |||||||||||||||||||||||   | || ||||||    ||||||||||| |||||| ||  |||||||||||||||    
T  12263566 ttgaacaaaatacttcataaatttccatcattttgaaaaaatttcaaattatt----atccaaacaatgaaattcaactcaaaatatttgaattc 12263476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 133 - 239
Target Start/End: Original strand, 32840125 - 32840227
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattcgacaaaaaatatttgaattccctaa 232  Q
    |||| |||||||||| || |||||||||||||||||||||||| || ||||||||||    ||||||| ||||||  |  ||| ||||| |||||||| |    
T  32840125 ttgaccaaaatacttcatgaatttccatcattttgaaaattcttcaaattattatcc----aaacaatgaaattcacctcaaagtatttaaattccctca 32840220  T
Q  233 aaacatt 239  Q
    |||||||    
T  32840221 aaacatt 32840227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 133 - 273
Target Start/End: Original strand, 2274722 - 2274858
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattcgacaaaaaatatttgaattccctaa 232  Q
    ||||||||||| ||| |||||| |||||||||||||||| ||| || ||| |||||||    ||||||  ||||   | ||||||||||||||||||| |    
T  2274722 ttgaacaaaattcttcataaatctccatcattttgaaaaatctcca-attcttatcca----aacaatggaattgatctaaaaatatttgaattccctta 2274816  T
Q  233 aaacattacattagctcaaaacattcctt-atccaaacacac 273  Q
    ||| |||  |||| ||| ||||||||||| ||||||||||||    
T  2274817 aaatattgtattacctcgaaacattccttcatccaaacacac 2274858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 140 - 259
Target Start/End: Complemental strand, 17905786 - 17905672
Alignment:
Q  140 aaatacttgataaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattcgacaaaaaatatttgaattccctaaaaacatt 239  Q
    ||||| || |||||||||||||||||||||||| || || |||||||||||     | |||  |||||  |  |||||||||||||||| | ||||||||    
T  17905786 aaatatttcataaatttccatcattttgaaaatccttcaaattattatcca-----aaaatggaattcacctcaaaatatttgaattcctttaaaacatt 17905692  T
Q  240 acattagctcaaaacattcc 259  Q
    |||||  |||||||||||||    
T  17905691 acattctctcaaaacattcc 17905672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 136 - 239
Target Start/End: Complemental strand, 20935843 - 20935744
Alignment:
Q  136 aacaaaatacttgataaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattcgaca-aaaaatatttgaattccctaaaa 234  Q
    |||||||||||| ||||||||| ||||||||||||||||| || |||||    ||||||||||||  ||||| |||  ||| |||||||||||||| |||    
T  20935843 aacaaaatacttcataaatttcaatcattttgaaaattcttcaaattat----catccaaacaatggaattc-acatcaaagtatttgaattccctcaaa 20935749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 133 - 260
Target Start/End: Complemental strand, 3092422 - 3092299
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattcgacaaaaaatatttgaattccctaa 232  Q
    ||||||||||||||| ||||||||| |||||||||||||| ||  | |||||||    ||||||||||  ||||   |  ||| |||||||||| ||| |    
T  3092422 ttgaacaaaatacttcataaatttctatcattttgaaaatgcttgaaattatta----tccaaacaatggaatttaccccaaagtatttgaatttcctca 3092327  T
Q  233 aaacattacattagctcaaaacattcct 260  Q
    ||||| ||||||  ||||||||||||||    
T  3092326 aaacaatacattccctcaaaacattcct 3092299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 133 - 190
Target Start/End: Complemental strand, 1730192 - 1730136
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatcca 190  Q
    ||||||||||| ||| ||||||| ||||||||||||||||||| || |||||||||||    
T  1730192 ttgaacaaaattcttcataaatt-ccatcattttgaaaattcttcaaattattatcca 1730136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 140 - 273
Target Start/End: Complemental strand, 13017912 - 13017782
Alignment:
Q  140 aaatacttgataaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattcgacaaaaaatatttgaattccctaaaaacatt 239  Q
    ||||| || |||||||| ||||||||||||||| || || |||||||||||    ||||||  |||||  |  ||| |||||||||||||| |||| |||    
T  13017912 aaatatttcataaattttcatcattttgaaaatccttcaaattattatcca----aacaatggaattcacctcaaagtatttgaattcccttaaaatatt 13017817  T
Q  240 acattagctcaaaaca-ttccttatccaaacacac 273  Q
    |||||  ||||||||| ||||  ||||||||||||    
T  13017816 acattccctcaaaacatttccacatccaaacacac 13017782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 213 - 273
Target Start/End: Complemental strand, 17180361 - 17180300
Alignment:
Q  213 aaaatatttgaattccctaaaaacattacattagctcaaaacatt-ccttatccaaacacac 273  Q
    |||||| ||||||||||| |||||||||||||  ||||||||||| ||| ||||||||||||    
T  17180361 aaaatagttgaattccctcaaaacattacattccctcaaaacattccctcatccaaacacac 17180300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 133 - 239
Target Start/End: Complemental strand, 21504590 - 21504488
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattcgacaaaaaatatttgaattccctaa 232  Q
    ||||||||||||||| |||||||  | |||||||||||||||| || ||||||    || ||||||||  |||||  |  |||||||||||||||||| |    
T  21504590 ttgaacaaaatacttcataaattaacttcattttgaaaattcttcaaattatt----attcaaacaatggaattcatctcaaaatatttgaattccctca 21504495  T
Q  233 aaacatt 239  Q
    |||||||    
T  21504494 aaacatt 21504488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 133 - 173
Target Start/End: Complemental strand, 2924864 - 2924824
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaatt 173  Q
    ||||||||||||||| |||||||| ||||||||||||||||    
T  2924864 ttgaacaaaatacttaataaattttcatcattttgaaaatt 2924824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 214 - 273
Target Start/End: Original strand, 30751356 - 30751416
Alignment:
Q  214 aaatatttgaattccctaaaaacattacattagctcaaaacattc-cttatccaaacacac 273  Q
    |||||||| ||||| || |||||||||||||| |||||||||||| || ||||||||||||    
T  30751356 aaatatttaaattcactcaaaacattacattatctcaaaacattctctcatccaaacacac 30751416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 220 - 273
Target Start/End: Original strand, 14365801 - 14365855
Alignment:
Q  220 ttgaattccctaaaaacattacattagctcaaaacattcct-tatccaaacacac 273  Q
    ||||||||||| |||||||||||||  ||||||||||||||  ||||||||||||    
T  14365801 ttgaattccctcaaaacattacattccctcaaaacattcctccatccaaacacac 14365855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 189 - 270
Target Start/End: Original strand, 29279004 - 29279086
Alignment:
Q  189 catccaaacaataaaattcgacaaaaaatatttgaattccctaaaaacattacattagctcaaaacattcctt-atccaaaca 270  Q
    ||||||||||||| ||||   |||||  ||||||||||  ||  ||||||||||||| ||||||||||||||| |||||||||    
T  29279004 catccaaacaatagaatttagcaaaatgtatttgaattatctcgaaacattacattacctcaaaacattccttcatccaaaca 29279086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 133 - 244
Target Start/End: Original strand, 32839581 - 32839688
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattcgacaaaaaatatttgaattccctaa 232  Q
    |||| |||||||||| || || ||||||||||| ||||||||| || ||||||    |||||||||||  |||||     ||| |||||||||||||| |    
T  32839581 ttgaccaaaatacttcatgaaattccatcatttggaaaattcttcaaattatt----atccaaacaatggaattcacgtcaaagtatttgaattccctca 32839676  T
Q  233 aaacattacatt 244  Q
    ||||||||||||    
T  32839677 aaacattacatt 32839688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 213 - 259
Target Start/End: Original strand, 41461610 - 41461656
Alignment:
Q  213 aaaatatttgaattccctaaaaacattacattagctcaaaacattcc 259  Q
    |||||| ||||||||||| |||||||||||||  |||||||||||||    
T  41461610 aaaatagttgaattccctcaaaacattacattccctcaaaacattcc 41461656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 28 - 60
Target Start/End: Original strand, 3039256 - 3039288
Alignment:
Q  28 aattttaaaaatattataacaatatagattgaa 60  Q
    |||||||| ||||||||||||||||||||||||    
T  3039256 aattttaagaatattataacaatatagattgaa 3039288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 28 - 60
Target Start/End: Original strand, 8555741 - 8555773
Alignment:
Q  28 aattttaaaaatattataacaatatagattgaa 60  Q
    |||||||| ||||||||||||||||||||||||    
T  8555741 aattttaagaatattataacaatatagattgaa 8555773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 28 - 60
Target Start/End: Complemental strand, 13767534 - 13767502
Alignment:
Q  28 aattttaaaaatattataacaatatagattgaa 60  Q
    |||||||||||||||||||||| ||||||||||    
T  13767534 aattttaaaaatattataacaacatagattgaa 13767502  T

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Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 28 - 60
Target Start/End: Original strand, 31899321 - 31899353
Alignment:
Q  28 aattttaaaaatattataacaatatagattgaa 60  Q
    |||||||| ||||||||||||||||||||||||    
T  31899321 aattttaagaatattataacaatatagattgaa 31899353  T

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Target: scaffold0014 (Bit Score: 48; Significance: 3e-18; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 133 - 245
Target Start/End: Original strand, 221129 - 221237
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattcgacaaaaaatatttgaattccctaa 232  Q
    ||||||||||||||| |||||||||||||||||||||||| |  || ||||||    ||||||| ||| ||||||  |  |||||||||||||||||| |    
T  221129 ttgaacaaaatacttcataaatttccatcattttgaaaatacatcaaattatt----atccaaataatgaaattcaccccaaaatatttgaattccctta 221224  T
Q  233 aaacattacatta 245  Q
    |||||||||||||    
T  221225 aaacattacatta 221237  T

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Target: scaffold0014; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 133 - 190
Target Start/End: Original strand, 223682 - 223739
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatcca 190  Q
    ||||||||||||||| |||||||||||||||||||||||| |  || |||||||||||    
T  223682 ttgaacaaaatacttcataaatttccatcattttgaaaatacatcaaattattatcca 223739  T

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Target: scaffold0129 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 133 - 188
Target Start/End: Original strand, 19718 - 19773
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatc 188  Q
    ||||||||||||||| ||||||||||||||||||||||||||| || |||||||||    
T  19718 ttgaacaaaatacttcataaatttccatcattttgaaaattcttcaaattattatc 19773  T

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Target: scaffold0065 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 133 - 190
Target Start/End: Original strand, 9519 - 9576
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatcca 190  Q
    ||||||||||||||| ||||||||||||||||||||||||||| || || ||||||||    
T  9519 ttgaacaaaatactttataaatttccatcattttgaaaattcttcaaatgattatcca 9576  T

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Target: scaffold0065; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 133 - 190
Target Start/End: Original strand, 2841 - 2898
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatcca 190  Q
    |||||||| |||||| ||||||| ||||||||||||||||||| || |||||||||||    
T  2841 ttgaacaatatacttcataaattcccatcattttgaaaattcttcaaattattatcca 2898  T

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Target: scaffold0301 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 133 - 273
Target Start/End: Complemental strand, 7291 - 7154
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatccatccaaacaataaaattcgacaaaaaatatttgaattccctaa 232  Q
    ||||| |||||||||  ||||||||||||||||||||||| || || |||||||    ||||||||||  |||||     ||| |||||||||||||| |    
T  7291 ttgaataaaatacttcgtaaatttccatcattttgaaaatgcttcaaattatta----tccaaacaatggaattcactccaaagtatttgaattccctta 7196  T
Q  233 aaacattacattagctcaaaacattcct-tatccaaacacac 273  Q
    ||||| ||||||  ||||||||||||||  ||||||||||||    
T  7195 aaacaatacattccctcaaaacattcctccatccaaacacac 7154  T

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Target: scaffold0337 (Bit Score: 38; Significance: 0.000000000003; HSPs: 2)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 133 - 190
Target Start/End: Original strand, 15799 - 15856
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatcca 190  Q
    |||||||| |||||| ||||||| ||||||||||||||||||| || |||||||||||    
T  15799 ttgaacaatatacttcataaattcccatcattttgaaaattcttcaaattattatcca 15856  T

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Target: scaffold0337; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 133 - 190
Target Start/End: Original strand, 16307 - 16364
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatcca 190  Q
    ||||||||||||||| |||||||||||||||||| |||||||| || || ||||||||    
T  16307 ttgaacaaaatactttataaatttccatcattttaaaaattcttcaaatgattatcca 16364  T

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Target: scaffold0047 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 133 - 187
Target Start/End: Original strand, 50240 - 50294
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattat 187  Q
    ||||||||| ||||| ||||||||||||||||||||||| ||| || ||||||||    
T  50240 ttgaacaaagtacttcataaatttccatcattttgaaaactcttcaaattattat 50294  T

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Target: scaffold0039 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 133 - 190
Target Start/End: Complemental strand, 109170 - 109114
Alignment:
Q  133 ttgaacaaaatacttgataaatttccatcattttgaaaattctacatattattatcca 190  Q
    ||||| ||||||||| ||||||||| ||||||||||||||||| || ||| |||||||    
T  109170 ttgaataaaatactttataaatttc-atcattttgaaaattcttcaaattcttatcca 109114  T

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Target: scaffold0009 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 220 - 260
Target Start/End: Complemental strand, 42054 - 42014
Alignment:
Q  220 ttgaattccctaaaaacattacattagctcaaaacattcct 260  Q
    ||||||||||| |||||||||||||  ||||||||||||||    
T  42054 ttgaattccctcaaaacattacattccctcaaaacattcct 42014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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