View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3398-Insertion-12 (Length: 267)
Name: NF3398-Insertion-12
Description: NF3398
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3398-Insertion-12 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 263; Significance: 1e-147; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 263; E-Value: 1e-147
Query Start/End: Original strand, 5 - 267
Target Start/End: Original strand, 36444840 - 36445102
Alignment:
| Q |
5 |
acaaaaatggcatcaaagaaaccatggagaataatcccaagaccacttctcgaaacagtcctcaacaaccacgctcaacaccaccgtgtccatcaaccac |
104 |
Q |
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| T |
36444840 |
acaaaaatggcatcaaagaaaccatggagaataatcccaagaccacttctcgaaacagtcctcaacaaccacgctcaacaccaccgtgtccatcaaccac |
36444939 |
T |
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| Q |
105 |
tcatcctccacggtccacgtggcgtcggaaaaaccaccttcattctcgaacgcgtactcaacgactggaacaaaggcccacacttcaccagttacgtcga |
204 |
Q |
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| T |
36444940 |
tcatcctccacggtccacgtggcgtcggaaaaaccaccttcattctcgaacgcgtactcaacgactggaacaaaggcccacacttcaccagttacgtcga |
36445039 |
T |
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| Q |
205 |
tttcgcccaactagcccagcccagcatatcaagcccatgggcttcatggtccaacttccctcc |
267 |
Q |
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| T |
36445040 |
tttcgcccaactagcccagcccagcatatcaagcccatgggcttcatggtccaacttccctcc |
36445102 |
T |
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