View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3398_high_4 (Length: 215)

Name: NF3398_high_4
Description: NF3398
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3398_high_4
NF3398_high_4
[»] chr2 (20 HSPs)
chr2 (18-102)||(45080642-45080726)
chr2 (93-181)||(41728891-41728979)
chr2 (18-94)||(2110220-2110296)
chr2 (18-94)||(43370674-43370750)
chr2 (18-94)||(29193988-29194064)
chr2 (18-92)||(28585907-28585981)
chr2 (18-95)||(4828313-4828390)
chr2 (20-94)||(25898463-25898537)
chr2 (20-94)||(31922065-31922139)
chr2 (18-69)||(8381540-8381591)
chr2 (20-95)||(42847133-42847208)
chr2 (18-97)||(1779296-1779375)
chr2 (61-94)||(29194255-29194288)
chr2 (18-59)||(39646550-39646591)
chr2 (61-94)||(45080420-45080453)
chr2 (61-96)||(30422659-30422694)
chr2 (61-95)||(43370941-43370975)
chr2 (65-94)||(7443123-7443152)
chr2 (61-94)||(8381316-8381349)
chr2 (61-94)||(31921621-31921654)
[»] chr7 (16 HSPs)
chr7 (18-96)||(27596309-27596387)
chr7 (18-92)||(25943869-25943943)
chr7 (18-94)||(4040947-4041023)
chr7 (18-94)||(29737405-29737481)
chr7 (18-95)||(40232339-40232416)
chr7 (18-94)||(31689577-31689653)
chr7 (18-95)||(41427872-41427949)
chr7 (18-94)||(24300368-24300444)
chr7 (20-95)||(21443024-21443099)
chr7 (18-95)||(6392270-6392347)
chr7 (20-95)||(22337709-22337785)
chr7 (18-94)||(38276769-38276845)
chr7 (20-107)||(22619511-22619598)
chr7 (20-71)||(48838082-48838134)
chr7 (61-96)||(25943647-25943682)
chr7 (32-95)||(44341007-44341068)
[»] chr3 (19 HSPs)
chr3 (18-95)||(41346046-41346123)
chr3 (18-94)||(54014237-54014313)
chr3 (20-94)||(50676475-50676549)
chr3 (18-94)||(40496773-40496849)
chr3 (18-94)||(51545662-51545738)
chr3 (18-94)||(12568232-12568308)
chr3 (18-94)||(13544696-13544772)
chr3 (18-94)||(48169724-48169800)
chr3 (20-85)||(24709019-24709084)
chr3 (20-95)||(30459805-30459880)
chr3 (46-95)||(16338961-16339010)
chr3 (61-102)||(48169991-48170032)
chr3 (61-96)||(13542790-13542825)
chr3 (65-96)||(34827320-34827351)
chr3 (65-94)||(38492052-38492081)
chr3 (61-94)||(40497040-40497073)
chr3 (61-94)||(41346314-41346347)
chr3 (61-94)||(50676740-50676773)
chr3 (61-94)||(51545929-51545962)
[»] chr4 (28 HSPs)
chr4 (18-94)||(40071673-40071749)
chr4 (18-94)||(34408881-34408957)
chr4 (18-94)||(54438381-54438457)
chr4 (18-91)||(37064977-37065050)
chr4 (18-94)||(17493753-17493829)
chr4 (18-94)||(51744708-51744784)
chr4 (18-87)||(47199493-47199562)
chr4 (18-94)||(925360-925436)
chr4 (18-95)||(20789672-20789749)
chr4 (20-95)||(10441142-10441218)
chr4 (18-96)||(39787990-39788069)
chr4 (18-94)||(21240326-21240402)
chr4 (20-87)||(46870614-46870681)
chr4 (18-71)||(3172243-3172296)
chr4 (20-94)||(41555462-41555536)
chr4 (18-65)||(33801006-33801053)
chr4 (20-94)||(32218163-32218237)
chr4 (20-89)||(28690121-28690189)
chr4 (61-94)||(34408657-34408690)
chr4 (65-96)||(10441602-10441633)
chr4 (61-95)||(17494020-17494054)
chr4 (61-91)||(33800786-33800816)
chr4 (61-95)||(51744518-51744552)
chr4 (61-94)||(37064753-37064786)
chr4 (61-94)||(39788260-39788293)
chr4 (61-94)||(40071449-40071482)
chr4 (18-59)||(53509866-53509907)
chr4 (61-94)||(54438157-54438190)
[»] chr1 (15 HSPs)
chr1 (18-94)||(46370927-46371003)
chr1 (18-95)||(38321644-38321721)
chr1 (20-94)||(46862556-46862630)
chr1 (18-95)||(1929440-1929517)
chr1 (18-95)||(32045832-32045909)
chr1 (18-94)||(28036925-28037001)
chr1 (18-94)||(39151121-39151197)
chr1 (20-96)||(8229061-8229137)
chr1 (20-94)||(40562660-40562734)
chr1 (18-95)||(50776996-50777073)
chr1 (18-94)||(1207674-1207750)
chr1 (18-91)||(38817777-38817850)
chr1 (61-95)||(46862823-46862857)
chr1 (61-94)||(1929217-1929250)
chr1 (61-94)||(50777264-50777297)
[»] scaffold0318 (1 HSPs)
scaffold0318 (18-94)||(16357-16433)
[»] chr8 (17 HSPs)
chr8 (18-94)||(27820773-27820849)
chr8 (18-94)||(38070119-38070195)
chr8 (18-95)||(17493525-17493602)
chr8 (18-96)||(11254498-11254576)
chr8 (18-94)||(18575028-18575104)
chr8 (18-94)||(39906911-39906986)
chr8 (18-94)||(9753770-9753846)
chr8 (18-95)||(17336194-17336271)
chr8 (18-91)||(12738590-12738663)
chr8 (20-95)||(11146769-11146844)
chr8 (61-95)||(17493793-17493827)
chr8 (61-95)||(18575295-18575329)
chr8 (61-94)||(11254767-11254800)
chr8 (18-94)||(13243770-13243846)
chr8 (32-95)||(20244682-20244743)
chr8 (32-95)||(20248418-20248479)
chr8 (65-95)||(11147920-11147950)
[»] chr5 (11 HSPs)
chr5 (18-94)||(36982186-36982262)
chr5 (18-94)||(14044056-14044132)
chr5 (18-94)||(2970888-2970964)
chr5 (20-94)||(33403194-33403268)
chr5 (18-94)||(42897598-42897668)
chr5 (20-94)||(36768815-36768889)
chr5 (61-96)||(14044322-14044357)
chr5 (61-95)||(36982453-36982487)
chr5 (61-95)||(42897373-42897407)
chr5 (65-95)||(5213154-5213184)
chr5 (65-94)||(37304377-37304406)
[»] chr6 (14 HSPs)
chr6 (20-95)||(13041971-13042046)
chr6 (18-94)||(1241109-1241185)
chr6 (18-94)||(29182591-29182667)
chr6 (18-94)||(28541811-28541887)
chr6 (18-95)||(16435778-16435855)
chr6 (18-94)||(12350272-12350348)
chr6 (18-94)||(30736419-30736495)
chr6 (20-96)||(1870531-1870608)
chr6 (18-71)||(31013719-31013772)
chr6 (20-85)||(31833791-31833856)
chr6 (18-94)||(7271302-7271379)
chr6 (61-94)||(16436042-16436075)
chr6 (65-94)||(18991904-18991933)
chr6 (61-94)||(28541587-28541620)
[»] scaffold0047 (1 HSPs)
scaffold0047 (18-95)||(69752-69829)
[»] scaffold0519 (2 HSPs)
scaffold0519 (18-96)||(10817-10895)
scaffold0519 (61-94)||(10593-10626)
[»] scaffold0061 (1 HSPs)
scaffold0061 (18-94)||(10241-10317)
[»] scaffold0532 (1 HSPs)
scaffold0532 (18-74)||(3834-3890)
[»] scaffold1194 (1 HSPs)
scaffold1194 (20-94)||(978-1053)
[»] scaffold0016 (1 HSPs)
scaffold0016 (48-94)||(92374-92420)


Alignment Details
Target: chr2 (Bit Score: 81; Significance: 3e-38; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 45080642 - 45080726
Alignment:
Q  18 agaaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacggagggagtataacacaa 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  45080642 agaaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacggagggagtatatcacaa 45080726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 93 - 181
Target Start/End: Original strand, 41728891 - 41728979
Alignment:
Q  93 tataacacaattttattttatttctgtgaaattaaaccctcttgaatgagagttttgttatccattatgatattatccttattttttgt 181  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  41728891 tataacacaattttattttatttctgtcaaattaaaccctcttgaatgagagttttgttatccgttatgatattatctttattttttgt 41728979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 2110296 - 2110220
Alignment:
Q  18 agaaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacggagggagta 94  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2110296 agaaatctgataaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacggagggagta 2110220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 43370750 - 43370674
Alignment:
Q  18 agaaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacggagggagta 94  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43370750 agaaatctaagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacggagggagta 43370674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 29194064 - 29193988
Alignment:
Q  18 agaaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacggagggagta 94  Q
    |||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||    
T  29194064 agaaatctgagaaggtcaagtattgtgggacacattttttttacaaataggtcacttattcagggacggagggagta 29193988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 18 - 92
Target Start/End: Original strand, 28585907 - 28585981
Alignment:
Q  18 agaaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacggagggag 92  Q
    |||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  28585907 agaaatctgagaaggttaagtattgtgggataaatattttttacaaataggtcacttattcagggacggagggag 28585981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 4828313 - 4828390
Alignment:
Q  18 agaaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacggagggagtat 95  Q
    |||||| |||||||||||| ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||    
T  4828313 agaaatttgagaaggtcaaatattgtgggacaaatattttttacaaatatgtcacttattgagggacggagggagtat 4828390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 20 - 94
Target Start/End: Complemental strand, 25898537 - 25898463
Alignment:
Q  20 aaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacggagggagta 94  Q
    |||| |||||||||| |||||| ||||| || | |||||||||||||||||||||||||||||||||||||||||    
T  25898537 aaatttgagaaggtcgagtattttgggataatttttttttacaaataggtcacttattcagggacggagggagta 25898463  T

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Target: chr2; HSP #9
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 20 - 94
Target Start/End: Original strand, 31922065 - 31922139
Alignment:
Q  20 aaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacggagggagta 94  Q
    |||| ||||||||||||||||| |||||||| | ||||||||||||| |||||||||| |||||||||| |||||    
T  31922065 aaatttgagaaggtcaagtattttgggacaatttttttttacaaatatgtcacttatttagggacggagagagta 31922139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 18 - 69
Target Start/End: Original strand, 8381540 - 8381591
Alignment:
Q  18 agaaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggt 69  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||||||||    
T  8381540 agaaatttgagaaggtcaagtatcgtgggacaaatattttttacaaataggt 8381591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 20 - 95
Target Start/End: Original strand, 42847133 - 42847208
Alignment:
Q  20 aaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacggagggagtat 95  Q
    |||||||| ||||||||||||| ||||||||||||||||| |||||||||||  |||| | ||||||||| |||||    
T  42847133 aaatctgaaaaggtcaagtattatgggacaaatatttttttcaaataggtcaaatattaaaggacggaggtagtat 42847208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 18 - 97
Target Start/End: Original strand, 1779296 - 1779375
Alignment:
Q  18 agaaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacggagggagtataa 97  Q
    |||||||||||||| ||| | ||||||||||||||||||| |   |||||||||  |||| |||||||||||||||||||    
T  1779296 agaaatctgagaagatcaggcattgtgggacaaatattttcttttaataggtcaagtattgagggacggagggagtataa 1779375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 61 - 94
Target Start/End: Original strand, 29194255 - 29194288
Alignment:
Q  61 caaataggtcacttattcagggacggagggagta 94  Q
    ||||||||||||||||||||||||||||||||||    
T  29194255 caaataggtcacttattcagggacggagggagta 29194288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 59
Target Start/End: Original strand, 39646550 - 39646591
Alignment:
Q  18 agaaatctgagaaggtcaagtattgtgggacaaatatttttt 59  Q
    ||||||||||||| ||||| ||||||||||||||||||||||    
T  39646550 agaaatctgagaatgtcaaatattgtgggacaaatatttttt 39646591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 61 - 94
Target Start/End: Complemental strand, 45080453 - 45080420
Alignment:
Q  61 caaataggtcacttattcagggacggagggagta 94  Q
    ||||||||||||||||||||||||||||||||||    
T  45080453 caaataggtcacttattcagggacggagggagta 45080420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 61 - 96
Target Start/End: Original strand, 30422659 - 30422694
Alignment:
Q  61 caaataggtcacttattcagggacggagggagtata 96  Q
    |||||||||||||||||||| |||||||||||||||    
T  30422659 caaataggtcacttattcagcgacggagggagtata 30422694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 95
Target Start/End: Original strand, 43370941 - 43370975
Alignment:
Q  61 caaataggtcacttattcagggacggagggagtat 95  Q
    ||||||||||||||||| |||||||||||||||||    
T  43370941 caaataggtcacttattaagggacggagggagtat 43370975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 65 - 94
Target Start/End: Original strand, 7443123 - 7443152
Alignment:
Q  65 taggtcacttattcagggacggagggagta 94  Q
    ||||||||||||||||||||||||||||||    
T  7443123 taggtcacttattcagggacggagggagta 7443152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 61 - 94
Target Start/End: Complemental strand, 8381349 - 8381316
Alignment:
Q  61 caaataggtcacttattcagggacggagggagta 94  Q
    ||||||| ||||||||||||||||||||||||||    
T  8381349 caaatagatcacttattcagggacggagggagta 8381316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 61 - 94
Target Start/End: Complemental strand, 31921654 - 31921621
Alignment:
Q  61 caaataggtcacttattcagggacggagggagta 94  Q
    ||||||| ||||||||||||||||||||||||||    
T  31921654 caaatagatcacttattcagggacggagggagta 31921621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 79; Significance: 4e-37; HSPs: 16)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 27596309 - 27596387
Alignment:
Q  18 agaaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacggagggagtata 96  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27596309 agaaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacggagggagtata 27596387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 18 - 92
Target Start/End: Original strand, 25943869 - 25943943
Alignment:
Q  18 agaaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacggagggag 92  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25943869 agaaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacggagggag 25943943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 4041023 - 4040947
Alignment:
Q  18 agaaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacggagggagta 94  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  4041023 agaaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagagacggagggagta 4040947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 29737481 - 29737405
Alignment:
Q  18 agaaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacggagggagta 94  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29737481 agaaatctaagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacggagggagta 29737405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 40232339 - 40232416
Alignment:
Q  18 agaaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacggagggagtat 95  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  40232339 agaaatttgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcaaggacggagggagtat 40232416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 31689577 - 31689653
Alignment:
Q  18 agaaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacggagggagta 94  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  31689577 agaaatctgagaaggtcaagtattgtgggacagatattttttacaaataggtcacttattcagggacgaagggagta 31689653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 41427872 - 41427949
Alignment:
Q  18 agaaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacggagggagtat 95  Q
    |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| | |||||||||||||||    
T  41427872 agaaatctgagaagatcaaatattgtgggacaaatattttttacaaataggtcacttatttaaggacggagggagtat 41427949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 24300368 - 24300444
Alignment:
Q  18 agaaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacggagggagta 94  Q
    |||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  24300368 agaaatttgataaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcaaagacggagggagta 24300444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 20 - 95
Target Start/End: Original strand, 21443024 - 21443099
Alignment:
Q  20 aaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacggagggagtat 95  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||  |||| |||||||||||||||||    
T  21443024 aaatctgagaaggtcaagtattgtgggacaaatatttttttcaaataggtcaagtattgagggacggagggagtat 21443099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 6392347 - 6392270
Alignment:
Q  18 agaaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacggagggagtat 95  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||| ||| ||||||| |||||    
T  6392347 agaaatctgagaaggtaaagtattgtgggacaaatattttttacaaatagatcacttattaaggaacggaggaagtat 6392270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 20 - 95
Target Start/End: Complemental strand, 22337785 - 22337709
Alignment:
Q  20 aaatctgagaaggtcaagtattgtgggacaaatatttttt-acaaataggtcacttattcagggacggagggagtat 95  Q
    |||| ||||||||||||||||| |||||||| | |||||| ||||||||||||||||||||||||||||||||||||    
T  22337785 aaatttgagaaggtcaagtattttgggacaattttttttttacaaataggtcacttattcagggacggagggagtat 22337709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 38276769 - 38276845
Alignment:
Q  18 agaaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacggagggagta 94  Q
    |||||| ||| ||||||||||||||||||||||||||||||| |||||||||||  |||| ||||||||||||||||    
T  38276769 agaaatatgaaaaggtcaagtattgtgggacaaatatttttttcaaataggtcaagtattgagggacggagggagta 38276845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 20 - 107
Target Start/End: Complemental strand, 22619598 - 22619511
Alignment:
Q  20 aaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacggagggagtataacacaatttta 107  Q
    |||| ||||||| ||||||||| ||  |||| | | |||||||||||||||||||||||||| |||||||||||| |  |||||||||    
T  22619598 aaatttgagaagatcaagtattttgaaacaattttattttacaaataggtcacttattcaggaacggagggagtacattacaatttta 22619511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 20 - 71
Target Start/End: Complemental strand, 48838134 - 48838082
Alignment:
Q  20 aaatctgagaaggtcaagtattgtgggacaaatatt-ttttacaaataggtca 71  Q
    ||||||||||| |||||||||||||||||||||||| |||| |||||||||||    
T  48838134 aaatctgagaaagtcaagtattgtgggacaaatattttttttcaaataggtca 48838082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 61 - 96
Target Start/End: Complemental strand, 25943682 - 25943647
Alignment:
Q  61 caaataggtcacttattcagggacggagggagtata 96  Q
    ||||||||||||||||||||||||||||||||||||    
T  25943682 caaataggtcacttattcagggacggagggagtata 25943647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 95
Target Start/End: Complemental strand, 44341068 - 44341007
Alignment:
Q  32 gtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacggagggagtat 95  Q
    ||||| |||| ||||||||||||||||||||||| |||  ||||||  ||||||||||||||||    
T  44341068 gtcaattattttgggacaaatattttttacaaatgggt--cttattatgggacggagggagtat 44341007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 78; Significance: 2e-36; HSPs: 19)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 41346123 - 41346046
Alignment:
Q  18 agaaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacggagggagtat 95  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41346123 agaaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacggagggagtat 41346046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 54014313 - 54014237
Alignment:
Q  18 agaaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacggagggagta 94  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54014313 agaaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacggagggagta 54014237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 20 - 94
Target Start/End: Complemental strand, 50676549 - 50676475
Alignment:
Q  20 aaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacggagggagta 94  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50676549 aaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacggagggagta 50676475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 40496849 - 40496773
Alignment:
Q  18 agaaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacggagggagta 94  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  40496849 agaaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcaaggacggagggagta 40496773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 51545738 - 51545662
Alignment:
Q  18 agaaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacggagggagta 94  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  51545738 agaaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcaggaacggagggagta 51545662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 12568232 - 12568308
Alignment:
Q  18 agaaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacggagggagta 94  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  12568232 agaaatctgagaaagtcaagtattgtgggacaaatattttttacaaatatgtcacttattcagggacggagggagta 12568308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 13544696 - 13544772
Alignment:
Q  18 agaaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacggagggagta 94  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  13544696 agaaatctgagaaagtcaagtattgtgggacaaatattttttacaaatatgtcacttattcagggacggagggagta 13544772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 48169800 - 48169724
Alignment:
Q  18 agaaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacggagggagta 94  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  48169800 agaaatctgagaaggtcaagtattatgggacaaatattttttacaaataggtcacttattcagagacggagggagta 48169724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 24709084 - 24709019
Alignment:
Q  20 aaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacg 85  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24709084 aaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacg 24709019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 20 - 95
Target Start/End: Complemental strand, 30459880 - 30459805
Alignment:
Q  20 aaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacggagggagtat 95  Q
    |||| |||||||||||||||||  ||||||| | ||||||||||||||||||||||||||||||||||||||||||    
T  30459880 aaatttgagaaggtcaagtatttagggacaatttttttttacaaataggtcacttattcagggacggagggagtat 30459805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 46 - 95
Target Start/End: Complemental strand, 16339010 - 16338961
Alignment:
Q  46 gacaaatattttttacaaataggtcacttattcagggacggagggagtat 95  Q
    ||||||||||||||||||||| |||||||||| |||||| ||| ||||||    
T  16339010 gacaaatattttttacaaatatgtcacttatttagggacagagagagtat 16338961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 61 - 102
Target Start/End: Original strand, 48169991 - 48170032
Alignment:
Q  61 caaataggtcacttattcagggacggagggagtataacacaa 102  Q
    ||||||||||||||||| ||||||||||||||||||| ||||    
T  48169991 caaataggtcacttattaagggacggagggagtataaaacaa 48170032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 61 - 96
Target Start/End: Complemental strand, 13542825 - 13542790
Alignment:
Q  61 caaataggtcacttattcagggacggagggagtata 96  Q
    ||||||||||||||||||||||||||| ||||||||    
T  13542825 caaataggtcacttattcagggacggatggagtata 13542790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 65 - 96
Target Start/End: Complemental strand, 34827351 - 34827320
Alignment:
Q  65 taggtcacttattcagggacggagggagtata 96  Q
    ||||||||||||||||||||||||||||||||    
T  34827351 taggtcacttattcagggacggagggagtata 34827320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 65 - 94
Target Start/End: Complemental strand, 38492081 - 38492052
Alignment:
Q  65 taggtcacttattcagggacggagggagta 94  Q
    ||||||||||||||||||||||||||||||    
T  38492081 taggtcacttattcagggacggagggagta 38492052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 61 - 94
Target Start/End: Original strand, 40497040 - 40497073
Alignment:
Q  61 caaataggtcacttattcagggacggagggagta 94  Q
    ||||||||||||||||| ||||||||||||||||    
T  40497040 caaataggtcacttattaagggacggagggagta 40497073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 61 - 94
Target Start/End: Original strand, 41346314 - 41346347
Alignment:
Q  61 caaataggtcacttattcagggacggagggagta 94  Q
    |||||| |||||||||||||||||||||||||||    
T  41346314 caaatatgtcacttattcagggacggagggagta 41346347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 61 - 94
Target Start/End: Original strand, 50676740 - 50676773
Alignment:
Q  61 caaataggtcacttattcagggacggagggagta 94  Q
    ||||||||||||||||| ||||||||||||||||    
T  50676740 caaataggtcacttattaagggacggagggagta 50676773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 61 - 94
Target Start/End: Original strand, 51545929 - 51545962
Alignment:
Q  61 caaataggtcacttattcagggacggagggagta 94  Q
    |||||||||||||||||||||||||||| |||||    
T  51545929 caaataggtcacttattcagggacggagagagta 51545962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 77; Significance: 6e-36; HSPs: 28)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 40071673 - 40071749
Alignment:
Q  18 agaaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacggagggagta 94  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40071673 agaaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacggagggagta 40071749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 34408881 - 34408957
Alignment:
Q  18 agaaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacggagggagta 94  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34408881 agaaatctgagaaggtcaagtattatgggacaaatattttttacaaataggtcacttattcagggacggagggagta 34408957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 54438381 - 54438457
Alignment:
Q  18 agaaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacggagggagta 94  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54438381 agaaatctgagaagatcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacggagggagta 54438457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 37064977 - 37065050
Alignment:
Q  18 agaaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacggaggga 91  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  37064977 agaaatctgagaaggtcaagtattgtgggacaaatattttttacaaataagtcacttattcagggacggaggga 37065050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 17493829 - 17493753
Alignment:
Q  18 agaaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacggagggagta 94  Q
    |||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  17493829 agaaatctgagaagatcaagtattgtgagacaaatattttttacaaataggtcacttattcagggacggagggagta 17493753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 51744708 - 51744784
Alignment:
Q  18 agaaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacggagggagta 94  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  51744708 agaaatttgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttatttagggacggagggagta 51744784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 18 - 87
Target Start/End: Complemental strand, 47199562 - 47199493
Alignment:
Q  18 agaaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacgga 87  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  47199562 agaaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcacggacgga 47199493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 925360 - 925436
Alignment:
Q  18 agaaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacggagggagta 94  Q
    |||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| |||||||    
T  925360 agaaatctgagaaggtcaagtattgtaggataaatattttttacaaataggtcacttattcagggacggtgggagta 925436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 20789749 - 20789672
Alignment:
Q  18 agaaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacggagggagtat 95  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||||| ||| |||||||||||||||| ||||||    
T  20789749 agaaatctgagaagatcaagtattatgggacaaatattttttacaaatagatcatttattcagggacggagagagtat 20789672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 20 - 95
Target Start/End: Complemental strand, 10441218 - 10441142
Alignment:
Q  20 aaatctgagaaggtcaagtattgtgggacaaatatttttt-acaaataggtcacttattcagggacggagggagtat 95  Q
    |||| ||||||||||||||||| |||||||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  10441218 aaatttgagaaggtcaagtattttgggacaaatttttttttacaaataggtcacttattcagggacggagggagtat 10441142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 39788069 - 39787990
Alignment:
Q  18 agaaatctgagaaggtcaagtattgtgggacaaatatttttt-acaaataggtcacttattcagggacggagggagtata 96  Q
    |||||||||| ||||||||||||||||| ||||||||||||| |||||||||||||||||| || |||||||||||||||    
T  39788069 agaaatctgataaggtcaagtattgtggaacaaatatttttttacaaataggtcacttatttagagacggagggagtata 39787990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 21240402 - 21240326
Alignment:
Q  18 agaaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacggagggagta 94  Q
    |||| ||||||||||||||||||| ||||||||||||||||| |||||||||||  |||| ||||||||||||||||    
T  21240402 agaagtctgagaaggtcaagtattatgggacaaatatttttttcaaataggtcaagtattgagggacggagggagta 21240326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 20 - 87
Target Start/End: Complemental strand, 46870681 - 46870614
Alignment:
Q  20 aaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacgga 87  Q
    ||||||||| ||||||||||||||||||||||||||||||  ||||||||||  |||| |||||||||    
T  46870681 aaatctgagcaggtcaagtattgtgggacaaatattttttctaaataggtcaagtattgagggacgga 46870614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 3172243 - 3172296
Alignment:
Q  18 agaaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtca 71  Q
    |||||| |||||| |||||||||||||||||||||||||||| |||||||||||    
T  3172243 agaaatttgagaaagtcaagtattgtgggacaaatatttttttcaaataggtca 3172296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 20 - 94
Target Start/End: Complemental strand, 41555536 - 41555462
Alignment:
Q  20 aaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacggagggagta 94  Q
    |||| |||||||||||| ||||| ||||||||| |||||| |||||||||||  ||||  |||||||||||||||    
T  41555536 aaatttgagaaggtcaattattgcgggacaaattttttttccaaataggtcaagtattgcgggacggagggagta 41555462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 65
Target Start/End: Original strand, 33801006 - 33801053
Alignment:
Q  18 agaaatctgagaaggtcaagtattgtgggacaaatattttttacaaat 65  Q
    |||||||||||||||||||||||| | | |||||||||||||||||||    
T  33801006 agaaatctgagaaggtcaagtattatagaacaaatattttttacaaat 33801053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 20 - 94
Target Start/End: Original strand, 32218163 - 32218237
Alignment:
Q  20 aaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacggagggagta 94  Q
    |||||||||||  ||||||||| | ||||||||||||||| ||||||||| |  |||| |||||||||| |||||    
T  32218163 aaatctgagaaaatcaagtattataggacaaatatttttttcaaataggtgaagtattgagggacggagagagta 32218237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 89
Target Start/End: Original strand, 28690121 - 28690189
Alignment:
Q  20 aaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacggagg 89  Q
    |||| |||||||||||| |||| || ||||| | ||||||||||||| |||| |||||||||||||||||    
T  28690121 aaatttgagaaggtcaaatattttgcgacaatt-ttttttacaaatatgtcagttattcagggacggagg 28690189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 61 - 94
Target Start/End: Complemental strand, 34408690 - 34408657
Alignment:
Q  61 caaataggtcacttattcagggacggagggagta 94  Q
    ||||||||||||||||||||||||||||||||||    
T  34408690 caaataggtcacttattcagggacggagggagta 34408657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 65 - 96
Target Start/End: Original strand, 10441602 - 10441633
Alignment:
Q  65 taggtcacttattcagggacggagggagtata 96  Q
    ||||||||||||||||||||||||||||||||    
T  10441602 taggtcacttattcagggacggagggagtata 10441633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 95
Target Start/End: Original strand, 17494020 - 17494054
Alignment:
Q  61 caaataggtcacttattcagggacggagggagtat 95  Q
    ||||||||||||||||| |||||||||||||||||    
T  17494020 caaataggtcacttattaagggacggagggagtat 17494054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 91
Target Start/End: Complemental strand, 33800816 - 33800786
Alignment:
Q  61 caaataggtcacttattcagggacggaggga 91  Q
    |||||||||||||||||||||||||||||||    
T  33800816 caaataggtcacttattcagggacggaggga 33800786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 95
Target Start/End: Complemental strand, 51744552 - 51744518
Alignment:
Q  61 caaataggtcacttattcagggacggagggagtat 95  Q
    |||||||||||||||||||||||||||| ||||||    
T  51744552 caaataggtcacttattcagggacggagagagtat 51744518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 61 - 94
Target Start/End: Complemental strand, 37064786 - 37064753
Alignment:
Q  61 caaataggtcacttattcagggacggagggagta 94  Q
    ||||||||||||||||||||||||||| ||||||    
T  37064786 caaataggtcacttattcagggacggatggagta 37064753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 61 - 94
Target Start/End: Original strand, 39788260 - 39788293
Alignment:
Q  61 caaataggtcacttattcagggacggagggagta 94  Q
    ||||||||||||||||||||||||| ||||||||    
T  39788260 caaataggtcacttattcagggacgaagggagta 39788293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 61 - 94
Target Start/End: Complemental strand, 40071482 - 40071449
Alignment:
Q  61 caaataggtcacttattcagggacggagggagta 94  Q
    ||||||||||||||||| ||||||||||||||||    
T  40071482 caaataggtcacttattaagggacggagggagta 40071449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 18 - 59
Target Start/End: Original strand, 53509866 - 53509907
Alignment:
Q  18 agaaatctgagaaggtcaagtattgtgggacaaatatttttt 59  Q
    |||||||||| |||||||| |||||||| |||||||||||||    
T  53509866 agaaatctgataaggtcaaatattgtggaacaaatatttttt 53509907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 61 - 94
Target Start/End: Complemental strand, 54438190 - 54438157
Alignment:
Q  61 caaataggtcacttattcagggacggagggagta 94  Q
    ||||||||||||||||| ||||||||||||||||    
T  54438190 caaataggtcacttatttagggacggagggagta 54438157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 77; Significance: 6e-36; HSPs: 15)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 46371003 - 46370927
Alignment:
Q  18 agaaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacggagggagta 94  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46371003 agaaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacggagggagta 46370927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 38321721 - 38321644
Alignment:
Q  18 agaaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacggagggagtat 95  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  38321721 agaaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcagttattcagggacggagggagtat 38321644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 20 - 94
Target Start/End: Complemental strand, 46862630 - 46862556
Alignment:
Q  20 aaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacggagggagta 94  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46862630 aaatctaagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacggagggagta 46862556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 1929440 - 1929517
Alignment:
Q  18 agaaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacggagggagtat 95  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  1929440 agaaatatgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttatttagggacggagggagtat 1929517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 32045909 - 32045832
Alignment:
Q  18 agaaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacggagggagtat 95  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  32045909 agaaatctgagaaggtcaagtattgtggaacaaatattttttacaaatagatcacttattcagggacggagggagtat 32045832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 28036925 - 28037001
Alignment:
Q  18 agaaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacggagggagta 94  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  28036925 agaaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcatttattaagggacggagggagta 28037001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 39151121 - 39151197
Alignment:
Q  18 agaaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacggagggagta 94  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  39151121 agaaatctaagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacggagagagta 39151197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 20 - 96
Target Start/End: Complemental strand, 8229137 - 8229061
Alignment:
Q  20 aaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacggagggagtata 96  Q
    |||||| ||||||| |||||||| || |||||||||||||| |||||||||||||||||||||||||||||||||||    
T  8229137 aaatctaagaaggttaagtattgaggaacaaatattttttataaataggtcacttattcagggacggagggagtata 8229061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 20 - 94
Target Start/End: Original strand, 40562660 - 40562734
Alignment:
Q  20 aaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacggagggagta 94  Q
    |||| |||||| |||||||||||||||||||||||||||| |||||||||||  |||| ||| ||||||||||||    
T  40562660 aaatatgagaatgtcaagtattgtgggacaaatatttttttcaaataggtcaagtattgaggtacggagggagta 40562734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 50777073 - 50776996
Alignment:
Q  18 agaaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacggagggagtat 95  Q
    |||||| | ||||||||||||||| |||||||||||||||||||||||| |||||||||| || |||| || ||||||    
T  50777073 agaaatttaagaaggtcaagtattatgggacaaatattttttacaaataagtcacttatttagagacgaagagagtat 50776996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 1207674 - 1207750
Alignment:
Q  18 agaaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacggagggagta 94  Q
    |||||||||||||||||||||||| |  |||||||||||||| |||||||||||  |||| | ||||||||||||||    
T  1207674 agaaatctgagaaggtcaagtattataagacaaatatttttttcaaataggtcaaatattgaaggacggagggagta 1207750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 38817850 - 38817777
Alignment:
Q  18 agaaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacggaggga 91  Q
    |||||| |||||| ||||| |||| ||||||||||||||||| ||||||| |||  |||| |||||| ||||||    
T  38817850 agaaatttgagaaagtcaaatattatgggacaaatatttttttcaaatagatcaagtattgagggacagaggga 38817777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 95
Target Start/End: Original strand, 46862823 - 46862857
Alignment:
Q  61 caaataggtcacttattcagggacggagggagtat 95  Q
    ||||||||||||||||| |||||||||||||||||    
T  46862823 caaataggtcacttattaagggacggagggagtat 46862857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 61 - 94
Target Start/End: Complemental strand, 1929250 - 1929217
Alignment:
Q  61 caaataggtcacttattcagggacggagggagta 94  Q
    |||||| |||||||||||||||||||||||||||    
T  1929250 caaatatgtcacttattcagggacggagggagta 1929217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 61 - 94
Target Start/End: Original strand, 50777264 - 50777297
Alignment:
Q  61 caaataggtcacttattcagggacggagggagta 94  Q
    ||||||||||||||||| ||||||||||||||||    
T  50777264 caaataggtcacttattaagggacggagggagta 50777297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0318 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 16433 - 16357
Alignment:
Q  18 agaaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacggagggagta 94  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16433 agaaatttgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacggagggagta 16357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 73; Significance: 2e-33; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 27820849 - 27820773
Alignment:
Q  18 agaaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacggagggagta 94  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  27820849 agaaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacagagggagta 27820773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 38070119 - 38070195
Alignment:
Q  18 agaaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacggagggagta 94  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  38070119 agaaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacagagggagta 38070195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 17493602 - 17493525
Alignment:
Q  18 agaaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacggagggagtat 95  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  17493602 agaaatctgagaagatcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacggaggaagtat 17493525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 11254576 - 11254498
Alignment:
Q  18 agaaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacggagggagtata 96  Q
    |||||||||| |||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||    
T  11254576 agaaatctgataaggtcaagtattgtgggacaatttttttttacaaataggtcacttattcagggacggagggagtata 11254498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 18575104 - 18575028
Alignment:
Q  18 agaaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacggagggagta 94  Q
    ||||||||||||||||| ||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  18575104 agaaatctgagaaggtcgagtattgtgggacaatttttttttacaaataggtcacttattcagggacggagggagta 18575028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 39906986 - 39906911
Alignment:
Q  18 agaaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacggagggagta 94  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||||| ||||||||||||||||||||| ||||    
T  39906986 agaaatctgagaaggtcaagtattgtgggacaaatat-ttttataaatagatcacttattcagggacggaggaagta 39906911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 9753846 - 9753770
Alignment:
Q  18 agaaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacggagggagta 94  Q
    |||||| ||||||||||||||||| |||||||||||||||||  ||||||||||  |||| ||||||||||||||||    
T  9753846 agaaatttgagaaggtcaagtattatgggacaaatattttttttaaataggtcaagtattgagggacggagggagta 9753770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 17336194 - 17336271
Alignment:
Q  18 agaaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacggagggagtat 95  Q
    |||||||| ||||||||||||||| |||||||||||||||||  ||||||||||  |||| || ||||||||||||||    
T  17336194 agaaatctaagaaggtcaagtattatgggacaaatattttttcaaaataggtcaagtattgagagacggagggagtat 17336271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 12738590 - 12738663
Alignment:
Q  18 agaaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacggaggga 91  Q
    |||||||||| ||||||||||||| ||||||||||||||||| ||||||| |||  |||| || ||||||||||    
T  12738590 agaaatctgataaggtcaagtattatgggacaaatattttttccaaatagatcaagtattgagagacggaggga 12738663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 95
Target Start/End: Complemental strand, 11146844 - 11146769
Alignment:
Q  20 aaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacggagggagtat 95  Q
    |||| ||| ||||||||||||| ||  |||| | |||||||||||||| ||||||||||| ||||||| |||||||    
T  11146844 aaatttgataaggtcaagtattttgaaacaatttttttttacaaatagatcacttattcaaggacggaaggagtat 11146769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 61 - 95
Target Start/End: Original strand, 17493793 - 17493827
Alignment:
Q  61 caaataggtcacttattcagggacggagggagtat 95  Q
    |||||||||||||||||||||||||||||||||||    
T  17493793 caaataggtcacttattcagggacggagggagtat 17493827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 61 - 95
Target Start/End: Original strand, 18575295 - 18575329
Alignment:
Q  61 caaataggtcacttattcagggacggagggagtat 95  Q
    |||||||||||||||||||||||||||||||||||    
T  18575295 caaataggtcacttattcagggacggagggagtat 18575329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 61 - 94
Target Start/End: Original strand, 11254767 - 11254800
Alignment:
Q  61 caaataggtcacttattcagggacggagggagta 94  Q
    ||||||||||||||||||||||||||||||||||    
T  11254767 caaataggtcacttattcagggacggagggagta 11254800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 13243770 - 13243846
Alignment:
Q  18 agaaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacggagggagta 94  Q
    |||||| |||||||||||| ||||||| |||| ||||||||| |||||| || |  |||| ||||||||| ||||||    
T  13243770 agaaatttgagaaggtcaaatattgtgagacatatattttttccaaataagttaagtattgagggacggatggagta 13243846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 95
Target Start/End: Complemental strand, 20244743 - 20244682
Alignment:
Q  32 gtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacggagggagtat 95  Q
    ||||| |||| ||||||||||||||||||||||| |||  ||||||  ||||||||||||||||    
T  20244743 gtcaattattttgggacaaatattttttacaaatgggt--cttattatgggacggagggagtat 20244682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 95
Target Start/End: Original strand, 20248418 - 20248479
Alignment:
Q  32 gtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacggagggagtat 95  Q
    ||||| |||| ||||||||||||||||||||||| |||  ||||||  ||||||||||||||||    
T  20248418 gtcaattattttgggacaaatattttttacaaatgggt--cttattatgggacggagggagtat 20248479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 95
Target Start/End: Original strand, 11147920 - 11147950
Alignment:
Q  65 taggtcacttattcagggacggagggagtat 95  Q
    |||||||||||||||||||||||||||||||    
T  11147920 taggtcacttattcagggacggagggagtat 11147950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 73; Significance: 2e-33; HSPs: 11)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 36982262 - 36982186
Alignment:
Q  18 agaaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacggagggagta 94  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36982262 agaaatatgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacggagggagta 36982186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 14044132 - 14044056
Alignment:
Q  18 agaaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacggagggagta 94  Q
    ||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14044132 agaaatctgagaaggtcaaatattatgggacaaatattttttacaaataggtcacttattcagggacggagggagta 14044056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 2970888 - 2970964
Alignment:
Q  18 agaaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacggagggagta 94  Q
    |||||| |||||| |||||||||||||||||||||||||||| |||||||||||  |||| ||||||||||||||||    
T  2970888 agaaatttgagaatgtcaagtattgtgggacaaatatttttttcaaataggtcaagtattgagggacggagggagta 2970964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 20 - 94
Target Start/End: Complemental strand, 33403268 - 33403194
Alignment:
Q  20 aaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacggagggagta 94  Q
    |||| ||||||||||||||||| | |||||| | |||||||||||||| ||||||||||||||||||||||||||    
T  33403268 aaatttgagaaggtcaagtattttaggacaatttttttttacaaatagatcacttattcagggacggagggagta 33403194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 42897598 - 42897668
Alignment:
Q  18 agaaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacggagggagta 94  Q
    ||||||||||||||||||||||||||||||||||||||||||||      |||||||||||||||||| ||||||||    
T  42897598 agaaatctgagaaggtcaagtattgtgggacaaatattttttac------gtcacttattcagggacgaagggagta 42897668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 20 - 94
Target Start/End: Original strand, 36768815 - 36768889
Alignment:
Q  20 aaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacggagggagta 94  Q
    |||| ||| |||||| |||||| |||||||| | ||||  | |||||||||||||||||||||||||||||||||    
T  36768815 aaatttgataaggtcgagtattttgggacaatttttttaaaaaaataggtcacttattcagggacggagggagta 36768889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 61 - 96
Target Start/End: Original strand, 14044322 - 14044357
Alignment:
Q  61 caaataggtcacttattcagggacggagggagtata 96  Q
    ||||||||||||||||||||||||||||||||||||    
T  14044322 caaataggtcacttattcagggacggagggagtata 14044357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 61 - 95
Target Start/End: Original strand, 36982453 - 36982487
Alignment:
Q  61 caaataggtcacttattcagggacggagggagtat 95  Q
    |||||||||||||||||||||||||||||||||||    
T  36982453 caaataggtcacttattcagggacggagggagtat 36982487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 61 - 95
Target Start/End: Complemental strand, 42897407 - 42897373
Alignment:
Q  61 caaataggtcacttattcagggacggagggagtat 95  Q
    |||||||||||||||||||||||||||||||||||    
T  42897407 caaataggtcacttattcagggacggagggagtat 42897373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 95
Target Start/End: Original strand, 5213154 - 5213184
Alignment:
Q  65 taggtcacttattcagggacggagggagtat 95  Q
    |||||||||||||||||||||||||||||||    
T  5213154 taggtcacttattcagggacggagggagtat 5213184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 65 - 94
Target Start/End: Original strand, 37304377 - 37304406
Alignment:
Q  65 taggtcacttattcagggacggagggagta 94  Q
    ||||||||||||||||||||||||||||||    
T  37304377 taggtcacttattcagggacggagggagta 37304406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 72; Significance: 6e-33; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 20 - 95
Target Start/End: Complemental strand, 13042046 - 13041971
Alignment:
Q  20 aaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacggagggagtat 95  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  13042046 aaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcaaggacggagggagtat 13041971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 1241185 - 1241109
Alignment:
Q  18 agaaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacggagggagta 94  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  1241185 agaaatctgagaagttcaagtattgtgggacaaatattttttacaaatagatcacttattcagggacggagggagta 1241109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 29182667 - 29182591
Alignment:
Q  18 agaaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacggagggagta 94  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  29182667 agaaatctgagaaggtcaagtattgtaggacaaatattttttacaaataggtcacttattcagggacagagggagta 29182591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 28541811 - 28541887
Alignment:
Q  18 agaaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacggagggagta 94  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||||||||||||    
T  28541811 agaaatctgagaaggtcaagtattgtgggataaatattttttacaaataagtcacttattcagagacggagggagta 28541887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 16435855 - 16435778
Alignment:
Q  18 agaaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacggagggagtat 95  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||||||| |||||    
T  16435855 agaaatttgagaaggtcaagtattgtgggacaaatattttttacaaataagtcatttatttagggacggaggaagtat 16435778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 12350348 - 12350272
Alignment:
Q  18 agaaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacggagggagta 94  Q
    |||||| |||||||||||| |||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||    
T  12350348 agaaatttgagaaggtcaaatattgtgggacaaatactttttacaaataggtcacttattcagagacggaggaagta 12350272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 30736495 - 30736419
Alignment:
Q  18 agaaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacggagggagta 94  Q
    |||||||||||||| |||| |||||||||||||||||||||| |||||||||||  |||| ||||||||||| ||||    
T  30736495 agaaatctgagaagatcaaatattgtgggacaaatatttttttcaaataggtcaagtattgagggacggaggaagta 30736419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 20 - 96
Target Start/End: Complemental strand, 1870608 - 1870531
Alignment:
Q  20 aaatctgagaaggtcaagtattgtgggacaaatatt-ttttacaaataggtcacttattcagggacggagggagtata 96  Q
    |||||||||||||||||||||||| | ||||||||| |||| |||||||||||  |||| ||||||||||| ||||||    
T  1870608 aaatctgagaaggtcaagtattgttgaacaaatatttttttccaaataggtcaagtattaagggacggaggaagtata 1870531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 31013719 - 31013772
Alignment:
Q  18 agaaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtca 71  Q
    |||||||||||||| ||||||||||||| ||||||||||||| |||||||||||    
T  31013719 agaaatctgagaagatcaagtattgtggaacaaatatttttttcaaataggtca 31013772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 31833791 - 31833856
Alignment:
Q  20 aaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacg 85  Q
    ||||||||||||||||||||| |||||||||||||||||| ||||||| |||  |||| |||||||    
T  31833791 aaatctgagaaggtcaagtatcgtgggacaaatatttttttcaaatagatcaagtattgagggacg 31833856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 7271302 - 7271379
Alignment:
Q  18 agaaatctgagaaggtcaagtattgtgggacaaata-ttttttacaaataggtcacttattcagggacggagggagta 94  Q
    |||||||| ||||||||||||||| ||||||||||| |||||| |||||||||||  |||| ||||| |||| |||||    
T  7271302 agaaatctaagaaggtcaagtattatgggacaaatattttttttcaaataggtcaagtattgagggatggagtgagta 7271379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 61 - 94
Target Start/End: Original strand, 16436042 - 16436075
Alignment:
Q  61 caaataggtcacttattcagggacggagggagta 94  Q
    ||||||||||||||||||||||||||||||||||    
T  16436042 caaataggtcacttattcagggacggagggagta 16436075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 65 - 94
Target Start/End: Complemental strand, 18991933 - 18991904
Alignment:
Q  65 taggtcacttattcagggacggagggagta 94  Q
    ||||||||||||||||||||||||||||||    
T  18991933 taggtcacttattcagggacggagggagta 18991904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 61 - 94
Target Start/End: Complemental strand, 28541620 - 28541587
Alignment:
Q  61 caaataggtcacttattcagggacggagggagta 94  Q
    ||||||||||||||||| ||||||||||||||||    
T  28541620 caaataggtcacttatttagggacggagggagta 28541587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 69829 - 69752
Alignment:
Q  18 agaaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacggagggagtat 95  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  69829 agaaatttgagaaggtcaagtattgtgggacaaatattttttacaaatatgtcacttattcagggacggagggagtat 69752  T

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Target: scaffold0519 (Bit Score: 67; Significance: 6e-30; HSPs: 2)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 10817 - 10895
Alignment:
Q  18 agaaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacggagggagtata 96  Q
    |||||||||| |||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||    
T  10817 agaaatctgataaggtcaagtattgtgggacaatttttttttacaaataggtcacttattcagggacggagggagtata 10895  T

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Target: scaffold0519; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 61 - 94
Target Start/End: Complemental strand, 10626 - 10593
Alignment:
Q  61 caaataggtcacttattcagggacggagggagta 94  Q
    ||||||||||||||||||||||||||||||||||    
T  10626 caaataggtcacttattcagggacggagggagta 10593  T

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Target: scaffold0061 (Bit Score: 65; Significance: 9e-29; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 10241 - 10317
Alignment:
Q  18 agaaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcacttattcagggacggagggagta 94  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  10241 agaaatatgagaaggtcaagtattgtgggacaaatattttttacaaatagatcacttattcaggaacggagggagta 10317  T

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Target: scaffold0532 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0532
Description:

Target: scaffold0532; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 18 - 74
Target Start/End: Complemental strand, 3890 - 3834
Alignment:
Q  18 agaaatctgagaaggtcaagtattgtgggacaaatattttttacaaataggtcactt 74  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  3890 agaaatctgagaaggtcaagtattatgggacaaatattttttacaaataggtcactt 3834  T

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Target: scaffold1194 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold1194
Description:

Target: scaffold1194; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 20 - 94
Target Start/End: Complemental strand, 1053 - 978
Alignment:
Q  20 aaatctgagaaggtcaagtattgtgggacaaatattttttacaaatagg-tcacttattcagggacggagggagta 94  Q
    |||||||||||| ||||||||||||||||||||||||||| |||||||| |||  |||| |||||| |||||||||    
T  1053 aaatctgagaagctcaagtattgtgggacaaatattttttccaaataggttcaagtattgagggactgagggagta 978  T

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Target: scaffold0016 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 48 - 94
Target Start/End: Original strand, 92374 - 92420
Alignment:
Q  48 caaatattttttacaaataggtcacttattcagggacggagggagta 94  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||    
T  92374 caaatattttttacaaatagatcacttattcagagacggagggagta 92420  T

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