View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3403_high_18 (Length: 239)
Name: NF3403_high_18
Description: NF3403
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3403_high_18 |
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Alignment Details
Target: chr7 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 46313430 - 46313650
Alignment:
| Q |
1 |
tttaattatggtctctctatcgttttgattatgaggtatatatcatatatatgcgtgttcatgaaataagttgaacaaggtctcttaataagcgtcaaac |
100 |
Q |
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| T |
46313430 |
tttaattatggtctctctattgttttgattatgaggtatatatcatatatatgtgtgttcatgaaataagttgaacaaggtc-cttaataagcgtcaaac |
46313528 |
T |
|
| Q |
101 |
aaggccttaattagctaaacccaaataatcaaattatcaagaacaaattgagagtattgctatacataggttggcttttccgtgtcccttctttttatag |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46313529 |
aaggccttaattagctaaacccaaataatcaaattatcaagaacaaattgagagtattgctatacataggttggcttttccgtgtcccttctttttatag |
46313628 |
T |
|
| Q |
201 |
nnnnnnnttataacctcctctt |
222 |
Q |
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||||||||||||||| |
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| T |
46313629 |
aaaaaaattataacctcctctt |
46313650 |
T |
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