View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3409_high_3 (Length: 337)

Name: NF3409_high_3
Description: NF3409
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3409_high_3
NF3409_high_3
[»] chr5 (36 HSPs)
chr5 (27-337)||(38816629-38816932)
chr5 (127-202)||(19820428-19820503)
chr5 (47-176)||(22423764-22423895)
chr5 (135-202)||(22013364-22013431)
chr5 (128-202)||(42469171-42469245)
chr5 (128-177)||(15410483-15410532)
chr5 (128-180)||(6326332-6326384)
chr5 (79-204)||(37328829-37328955)
chr5 (79-163)||(3966492-3966577)
chr5 (129-187)||(15382442-15382500)
chr5 (130-163)||(6035472-6035505)
chr5 (45-94)||(8420075-8420124)
chr5 (127-180)||(21191090-21191143)
chr5 (135-202)||(2436878-2436939)
chr5 (47-99)||(9929668-9929720)
chr5 (127-163)||(17123037-17123073)
chr5 (136-180)||(21522722-21522766)
chr5 (136-180)||(21533288-21533332)
chr5 (127-163)||(27144452-27144488)
chr5 (127-202)||(6247572-6247647)
chr5 (79-163)||(11685928-11686012)
chr5 (127-170)||(14674251-14674294)
chr5 (127-170)||(19579683-19579726)
chr5 (128-187)||(21137654-21137713)
chr5 (127-170)||(34879332-34879375)
chr5 (128-170)||(5873548-5873590)
chr5 (45-75)||(24906250-24906280)
chr5 (128-158)||(27932229-27932259)
chr5 (127-161)||(28588708-28588742)
chr5 (134-180)||(36642803-36642849)
chr5 (127-176)||(19552577-19552626)
chr5 (129-202)||(30135264-30135336)
chr5 (125-154)||(32766975-32767004)
chr5 (127-187)||(13287433-13287493)
chr5 (127-163)||(31084312-31084348)
chr5 (79-163)||(41995460-41995543)
[»] chr7 (38 HSPs)
chr7 (128-202)||(27944991-27945065)
chr7 (128-202)||(24105629-24105702)
chr7 (77-159)||(29787354-29787435)
chr7 (127-180)||(11722132-11722185)
chr7 (79-189)||(24339605-24339716)
chr7 (96-177)||(19206025-19206107)
chr7 (79-163)||(32308109-32308194)
chr7 (47-157)||(11700798-11700909)
chr7 (127-187)||(1433419-1433479)
chr7 (47-207)||(7328639-7328805)
chr7 (131-202)||(2034392-2034462)
chr7 (127-178)||(2425767-2425818)
chr7 (127-202)||(43027503-43027578)
chr7 (128-187)||(43249958-43250017)
chr7 (127-169)||(8046061-8046103)
chr7 (96-163)||(22484014-22484082)
chr7 (127-169)||(23191879-23191921)
chr7 (127-177)||(26733279-26733329)
chr7 (84-158)||(30731031-30731104)
chr7 (87-160)||(11072290-11072362)
chr7 (129-178)||(49107795-49107844)
chr7 (127-163)||(20549780-20549816)
chr7 (127-166)||(2948669-2948708)
chr7 (79-163)||(6630897-6630982)
chr7 (127-170)||(21828439-21828482)
chr7 (128-159)||(28155563-28155594)
chr7 (127-201)||(598160-598233)
chr7 (128-178)||(5235960-5236010)
chr7 (79-145)||(9933282-9933347)
chr7 (127-169)||(20545270-20545312)
chr7 (129-187)||(26329418-26329476)
chr7 (129-178)||(4017830-4017879)
chr7 (46-75)||(17852091-17852120)
chr7 (130-163)||(25791642-25791675)
chr7 (127-179)||(11061110-11061162)
chr7 (47-75)||(15680900-15680928)
chr7 (127-187)||(17851396-17851456)
chr7 (127-163)||(22868031-22868067)
[»] chr6 (45 HSPs)
chr6 (79-180)||(10294079-10294181)
chr6 (127-187)||(9027143-9027203)
chr6 (127-202)||(853893-853968)
chr6 (79-187)||(16766662-16766771)
chr6 (127-187)||(5000660-5000720)
chr6 (47-187)||(5732474-5732604)
chr6 (134-202)||(8365560-8365628)
chr6 (128-200)||(12696277-12696348)
chr6 (47-177)||(8805524-8805656)
chr6 (79-187)||(9107355-9107464)
chr6 (127-178)||(9629357-9629408)
chr6 (127-202)||(30866178-30866253)
chr6 (128-202)||(6389693-6389767)
chr6 (127-177)||(9658854-9658904)
chr6 (127-165)||(19040339-19040377)
chr6 (134-202)||(3398569-3398637)
chr6 (127-187)||(7938081-7938141)
chr6 (128-176)||(13851712-13851760)
chr6 (128-187)||(7977865-7977924)
chr6 (127-170)||(20371144-20371187)
chr6 (84-187)||(34073337-34073441)
chr6 (127-180)||(426548-426601)
chr6 (127-168)||(7265627-7265668)
chr6 (127-179)||(8777007-8777059)
chr6 (127-187)||(34595099-34595159)
chr6 (47-94)||(426478-426525)
chr6 (127-170)||(17841623-17841666)
chr6 (96-179)||(31579229-31579311)
chr6 (128-202)||(25038106-25038180)
chr6 (127-201)||(31959111-31959184)
chr6 (45-75)||(34073276-34073306)
chr6 (47-88)||(2117134-2117175)
chr6 (127-160)||(10842524-10842557)
chr6 (83-177)||(26562664-26562759)
chr6 (127-163)||(677826-677862)
chr6 (129-202)||(4877890-4877965)
chr6 (127-203)||(7930254-7930330)
chr6 (127-163)||(7996412-7996448)
chr6 (127-163)||(8022353-8022389)
chr6 (127-163)||(10339160-10339196)
chr6 (127-179)||(16833281-16833333)
chr6 (127-163)||(17341698-17341734)
chr6 (128-160)||(21395342-21395374)
chr6 (127-163)||(21424836-21424872)
chr6 (79-163)||(34290064-34290147)
[»] chr8 (22 HSPs)
chr8 (79-180)||(22651948-22652050)
chr8 (79-185)||(29510289-29510396)
chr8 (134-202)||(25192388-25192456)
chr8 (127-193)||(926822-926888)
chr8 (127-180)||(27213519-27213572)
chr8 (134-202)||(126390-126457)
chr8 (127-202)||(13436998-13437073)
chr8 (127-170)||(31109552-31109595)
chr8 (127-189)||(24362236-24362298)
chr8 (127-160)||(39954313-39954346)
chr8 (127-167)||(31236611-31236651)
chr8 (94-170)||(37283812-37283887)
chr8 (127-202)||(4298920-4298994)
chr8 (127-202)||(11944615-11944690)
chr8 (127-189)||(4673459-4673521)
chr8 (127-161)||(27101506-27101540)
chr8 (127-169)||(34897068-34897110)
chr8 (84-202)||(11927076-11927195)
chr8 (127-160)||(13844630-13844663)
chr8 (127-187)||(2572090-2572150)
chr8 (127-179)||(20873042-20873094)
chr8 (79-175)||(29776013-29776108)
[»] chr2 (34 HSPs)
chr2 (91-202)||(21782817-21782927)
chr2 (138-202)||(33519736-33519800)
chr2 (127-202)||(20539708-20539783)
chr2 (96-187)||(4332891-4332981)
chr2 (127-177)||(21616737-21616787)
chr2 (129-202)||(19536434-19536507)
chr2 (130-203)||(23717976-23718048)
chr2 (130-203)||(24105648-24105720)
chr2 (96-154)||(1327976-1328033)
chr2 (79-177)||(36409614-36409711)
chr2 (102-187)||(18276486-18276570)
chr2 (136-201)||(21624217-21624282)
chr2 (47-160)||(19573970-19574078)
chr2 (79-152)||(44860320-44860394)
chr2 (77-165)||(18420417-18420506)
chr2 (47-94)||(19536361-19536408)
chr2 (127-162)||(37411278-37411313)
chr2 (127-201)||(38117193-38117261)
chr2 (129-203)||(14996260-14996333)
chr2 (48-94)||(18255945-18255991)
chr2 (128-203)||(21374734-21374810)
chr2 (97-187)||(28412315-28412404)
chr2 (127-185)||(31018557-31018615)
chr2 (48-94)||(34691770-34691816)
chr2 (48-94)||(34714182-34714228)
chr2 (82-203)||(2331743-2331863)
chr2 (128-189)||(4142875-4142936)
chr2 (128-169)||(21091706-21091747)
chr2 (127-163)||(896200-896236)
chr2 (128-176)||(10535794-10535842)
chr2 (127-179)||(30404884-30404936)
chr2 (127-159)||(31284041-31284073)
chr2 (47-83)||(42511322-42511358)
chr2 (128-160)||(42832311-42832343)
[»] scaffold0306 (1 HSPs)
scaffold0306 (127-203)||(13349-13425)
[»] scaffold0223 (1 HSPs)
scaffold0223 (47-202)||(20122-20279)
[»] scaffold0152 (1 HSPs)
scaffold0152 (127-203)||(21902-21978)
[»] chr1 (38 HSPs)
chr1 (127-179)||(6427323-6427375)
chr1 (127-187)||(40917716-40917776)
chr1 (127-186)||(398799-398858)
chr1 (127-179)||(2896155-2896207)
chr1 (48-194)||(10572535-10572690)
chr1 (128-203)||(5376535-5376609)
chr1 (127-202)||(5927374-5927449)
chr1 (47-100)||(48547938-48547991)
chr1 (127-171)||(12443494-12443538)
chr1 (127-163)||(17831565-17831601)
chr1 (127-163)||(36878450-36878486)
chr1 (88-180)||(1486703-1486796)
chr1 (87-187)||(38503285-38503386)
chr1 (45-148)||(44482234-44482343)
chr1 (134-189)||(48040503-48040558)
chr1 (102-180)||(1262856-1262933)
chr1 (127-177)||(9709795-9709845)
chr1 (127-177)||(34298411-34298461)
chr1 (128-202)||(39130802-39130876)
chr1 (127-163)||(19562655-19562691)
chr1 (128-163)||(609493-609528)
chr1 (127-170)||(6415035-6415078)
chr1 (127-202)||(31014993-31015068)
chr1 (127-170)||(46348417-46348460)
chr1 (128-179)||(48450622-48450673)
chr1 (129-163)||(3490426-3490460)
chr1 (127-161)||(10475011-10475045)
chr1 (127-193)||(15641064-15641130)
chr1 (125-163)||(40285686-40285724)
chr1 (127-180)||(20157384-20157437)
chr1 (127-160)||(21530681-21530714)
chr1 (79-157)||(25361881-25361960)
chr1 (128-157)||(41877505-41877534)
chr1 (79-160)||(9828036-9828118)
chr1 (127-187)||(10577769-10577829)
chr1 (134-170)||(18556497-18556533)
chr1 (96-160)||(25452152-25452215)
chr1 (142-202)||(34315663-34315722)
[»] chr3 (38 HSPs)
chr3 (127-202)||(8383207-8383282)
chr3 (90-189)||(5441029-5441128)
chr3 (77-166)||(8039818-8039908)
chr3 (128-187)||(24205076-24205135)
chr3 (136-202)||(8842280-8842346)
chr3 (106-171)||(5407261-5407325)
chr3 (127-187)||(28917966-28918026)
chr3 (128-187)||(4991002-4991061)
chr3 (134-193)||(10335327-10335386)
chr3 (79-202)||(25064859-25064981)
chr3 (127-202)||(55401025-55401100)
chr3 (127-201)||(8587055-8587129)
chr3 (128-178)||(9800014-9800064)
chr3 (127-201)||(32429414-32429488)
chr3 (127-179)||(2620087-2620139)
chr3 (127-187)||(15796328-15796388)
chr3 (127-179)||(26492239-26492291)
chr3 (131-170)||(21720746-21720785)
chr3 (45-83)||(4466538-4466576)
chr3 (45-75)||(5440965-5440995)
chr3 (127-177)||(12674535-12674585)
chr3 (45-83)||(13807237-13807275)
chr3 (129-203)||(14223889-14223962)
chr3 (129-170)||(3865592-3865633)
chr3 (129-170)||(12703989-12704030)
chr3 (106-159)||(34307794-34307846)
chr3 (127-187)||(3164059-3164119)
chr3 (127-163)||(4987325-4987361)
chr3 (127-163)||(6525714-6525750)
chr3 (134-170)||(10318075-10318111)
chr3 (129-201)||(14618732-14618804)
chr3 (127-171)||(14832080-14832124)
chr3 (127-163)||(21479107-21479143)
chr3 (128-160)||(25074781-25074813)
chr3 (127-163)||(26290360-26290396)
chr3 (127-179)||(26508083-26508135)
chr3 (47-83)||(27505334-27505370)
chr3 (127-163)||(40052321-40052357)
[»] scaffold0168 (3 HSPs)
scaffold0168 (47-193)||(21002-21149)
scaffold0168 (47-108)||(21217-21278)
scaffold0168 (47-108)||(21346-21407)
[»] scaffold0053 (1 HSPs)
scaffold0053 (127-187)||(8763-8823)
[»] scaffold0007 (1 HSPs)
scaffold0007 (128-187)||(225303-225362)
[»] scaffold0003 (1 HSPs)
scaffold0003 (79-187)||(241559-241668)
[»] scaffold0004 (1 HSPs)
scaffold0004 (128-169)||(92790-92831)
[»] scaffold0044 (1 HSPs)
scaffold0044 (77-162)||(53170-53256)
[»] scaffold0018 (2 HSPs)
scaffold0018 (127-199)||(178853-178925)
scaffold0018 (128-169)||(192284-192325)
[»] chr4 (21 HSPs)
chr4 (127-187)||(23293020-23293080)
chr4 (128-163)||(35723420-35723455)
chr4 (129-163)||(17345451-17345485)
chr4 (128-185)||(847918-847975)
chr4 (127-180)||(36635296-36635349)
chr4 (128-187)||(24343472-24343531)
chr4 (79-185)||(30982863-30982967)
chr4 (128-170)||(7012048-7012090)
chr4 (127-208)||(7670625-7670709)
chr4 (127-177)||(20521883-20521933)
chr4 (129-187)||(20633450-20633508)
chr4 (47-170)||(30298928-30299048)
chr4 (47-170)||(30327796-30327916)
chr4 (127-161)||(40613441-40613475)
chr4 (129-198)||(28084475-28084544)
chr4 (127-159)||(1747205-1747237)
chr4 (127-202)||(5775392-5775469)
chr4 (127-170)||(16184801-16184842)
chr4 (47-91)||(18844423-18844467)
chr4 (47-83)||(28470448-28470484)
chr4 (134-202)||(28720827-28720894)
[»] scaffold0652 (1 HSPs)
scaffold0652 (127-187)||(496-556)
[»] scaffold0279 (1 HSPs)
scaffold0279 (126-202)||(17903-17979)
[»] scaffold0475 (1 HSPs)
scaffold0475 (128-187)||(3281-3340)
[»] scaffold0103 (1 HSPs)
scaffold0103 (127-170)||(51793-51836)
[»] scaffold0697 (1 HSPs)
scaffold0697 (127-160)||(1636-1669)
[»] scaffold0110 (1 HSPs)
scaffold0110 (90-172)||(28830-28913)
[»] scaffold0450 (1 HSPs)
scaffold0450 (47-75)||(8564-8592)
[»] scaffold0027 (2 HSPs)
scaffold0027 (127-179)||(46655-46707)
scaffold0027 (45-93)||(46731-46778)


Alignment Details
Target: chr5 (Bit Score: 269; Significance: 1e-150; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 27 - 337
Target Start/End: Original strand, 38816629 - 38816932
Alignment:
Q  27 atcacgattcacgaatataactatgaagcacggacactcctcgaattagccatgtccgacaccgacaccacaccgacacataattataatgaaatatagc 126  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  38816629 atcacgattcacgaatataactatgaatcacggacactcctcgaattagccatgtccgacaccgacaccacaccgacacataattatactgaaatatagc 38816728  T
Q  127 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatagtatatggttaccgttcaattattc 226  Q
    |||||||||||||||||||||||||||||||||||||||||||||       |||||||||||| |||||||||||||||||||||||||||||||||||    
T  38816729 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgc-------ggagtccgtattagtgcttcatagtatatggttaccgttcaattattc 38816821  T
Q  227 tattttctcaaattattgcttcaattcaagcaatgatacaaacaatataccatattacattaattgaattgtaaaacccaactatttttaacctgcagcg 326  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38816822 tattttctcaaattattgcttcaattcaaacaatgatacaaacaatataccatattacattaattgaattgtaaaacccaactatttttaacctgcagcg 38816921  T
Q  327 actctctgttg 337  Q
    |||||||||||    
T  38816922 actctctgttg 38816932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 127 - 202
Target Start/End: Original strand, 19820428 - 19820503
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 202  Q
    |||||||||||||||||||||||||||| |||||||| |||||| ||||||||| |||||||| ||||||||||||    
T  19820428 gattttctcaaattattagcggtgtcggagtgtcagtgtccgtgtcgtgtccggtgtccgtatccgtgcttcatag 19820503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 47 - 176
Target Start/End: Original strand, 22423764 - 22423895
Alignment:
Q  47 ctatgaagcacggacactcctcgaattagccatgtcc-gacaccgacaccacaccgacacata--attataatgaaatatagcgattttctcaaattatt 143  Q
    ||||||||||||||||||||||| ||||| | ||||| ||||||||||| ||||||||| |||  |||||| |||| ||| | |||||||||||||||||    
T  22423764 ctatgaagcacggacactcctcggattaggcgtgtccagacaccgacacgacaccgacatatataattatattgaattat-gtgattttctcaaattatt 22423862  T
Q  144 agcggtgtcggcgtgtcagtatccgtgccgtgt 176  Q
    ||  ||||| | ||||||||||||||| |||||    
T  22423863 agtagtgtcagggtgtcagtatccgtgtcgtgt 22423895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 135 - 202
Target Start/End: Complemental strand, 22013431 - 22013364
Alignment:
Q  135 caaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 202  Q
    |||||||||||| |||||||||||||||| |||||| ||||||||| |||||||| ||||||||||||    
T  22013431 caaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtatccgtgcttcatag 22013364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 128 - 202
Target Start/End: Complemental strand, 42469245 - 42469171
Alignment:
Q  128 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 202  Q
    ||||||||||||||||| | |||||||||||||| |||||||| ||||| ||| |||||| | ||||||||||||    
T  42469245 attttctcaaattattatccgtgtcggcgtgtcattatccgtgtcgtgttcggtgtccgtgtccgtgcttcatag 42469171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 128 - 177
Target Start/End: Original strand, 15410483 - 15410532
Alignment:
Q  128 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtc 177  Q
    ||||||| |||||||||||||||||||||||||||| |||||| ||||||    
T  15410483 attttcttaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtc 15410532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 128 - 180
Target Start/End: Original strand, 6326332 - 6326384
Alignment:
Q  128 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccgg 180  Q
    |||||||||||||| ||||| ||||||||||||||| |||||| |||||||||    
T  6326332 attttctcaaattactagcgatgtcggcgtgtcagtgtccgtgtcgtgtccgg 6326384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 79 - 204
Target Start/End: Original strand, 37328829 - 37328955
Alignment:
Q  79 tgtccgacaccgacaccacaccgacacat--aattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgt 176  Q
    |||||||||||||||| ||||||||||||  ||||| | |||| | | | ||||||  ||||||||| || ||||||| || ||||| |||||| |||||    
T  37328829 tgtccgacaccgacacgacaccgacacatgtaattacactgaatttt-gtgatttttacaaattatttgctgtgtcggtgtatcagtgtccgtgtcgtgt 37328927  T
Q  177 ccggagtccgtattcgtgcttcatagta 204  Q
     ||| |||||| | ||||||||||||||    
T  37328928 tcggtgtccgtgtccgtgcttcatagta 37328955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 79 - 163
Target Start/End: Complemental strand, 3966577 - 3966492
Alignment:
Q  79 tgtccgacaccgacaccacaccgacacata--attataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagt 163  Q
    |||||||||| ||||| |||||||||||||  |||| | |||| | | | ||||||||||||||||||||||||||||| |||||||    
T  3966577 tgtccgacactgacacgacaccgacacatataattacactgaattgt-gtgattttctcaaattattagcggtgtcggcatgtcagt 3966492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 129 - 187
Target Start/End: Complemental strand, 15382500 - 15382442
Alignment:
Q  129 ttttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 187  Q
    |||| ||||||||||||| |||||||||||||| | |||||| ||||||||| ||||||    
T  15382500 ttttttcaaattattagctgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgt 15382442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 130 - 163
Target Start/End: Complemental strand, 6035505 - 6035472
Alignment:
Q  130 tttctcaaattattagcggtgtcggcgtgtcagt 163  Q
    ||||||||||||||||||||||||||||||||||    
T  6035505 tttctcaaattattagcggtgtcggcgtgtcagt 6035472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 45 - 94
Target Start/End: Complemental strand, 8420124 - 8420075
Alignment:
Q  45 aactatgaagcacggacactcctcgaattagccatgtccgacaccgacac 94  Q
    |||||||||||||||| |||||||||||||| |  |||||||||||||||    
T  8420124 aactatgaagcacggatactcctcgaattaggcgcgtccgacaccgacac 8420075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 127 - 180
Target Start/End: Original strand, 21191090 - 21191143
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccgg 180  Q
    |||||| ||||||||||||| |||||||| ||||||| |||||| |||||||||    
T  21191090 gattttttcaaattattagctgtgtcggcatgtcagtgtccgtgtcgtgtccgg 21191143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 135 - 202
Target Start/End: Complemental strand, 2436939 - 2436878
Alignment:
Q  135 caaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 202  Q
    |||||||||||||||||||||||||||      ||| ||||||||| |||||||| ||||||||||||    
T  2436939 caaattattagcggtgtcggcgtgtca------gtgtcgtgtccggtgtccgtatccgtgcttcatag 2436878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 99
Target Start/End: Complemental strand, 9929720 - 9929668
Alignment:
Q  47 ctatgaagcacggacactcctcgaattagccatgtccgacaccgacaccacac 99  Q
    ||||||||||| ||||||||||||||||| | ||||||| |||||||| ||||    
T  9929720 ctatgaagcacagacactcctcgaattagtcgtgtccgataccgacacgacac 9929668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 163
Target Start/End: Complemental strand, 17123073 - 17123037
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgtcagt 163  Q
    ||||||||||||||||||||||||| |||||||||||    
T  17123073 gattttctcaaattattagcggtgttggcgtgtcagt 17123037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 180
Target Start/End: Complemental strand, 21522766 - 21522722
Alignment:
Q  136 aaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccgg 180  Q
    ||||||||||| |||||||||||||||| |||||| |||||||||    
T  21522766 aaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccgg 21522722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 180
Target Start/End: Complemental strand, 21533332 - 21533288
Alignment:
Q  136 aaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccgg 180  Q
    ||||||||||| |||||||||||||||| |||||| |||||||||    
T  21533332 aaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccgg 21533288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 163
Target Start/End: Complemental strand, 27144488 - 27144452
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgtcagt 163  Q
    ||||| |||||||||||||||||||||||||||||||    
T  27144488 gatttcctcaaattattagcggtgtcggcgtgtcagt 27144452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 127 - 202
Target Start/End: Complemental strand, 6247647 - 6247572
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 202  Q
    |||||| ||||||||||||  |||||||||||||||| | |||  ||||||||| ||||| || |||| |||||||    
T  6247647 gattttttcaaattattagatgtgtcggcgtgtcagtgtgcgtatcgtgtccggtgtccgcatccgtgtttcatag 6247572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 79 - 163
Target Start/End: Complemental strand, 11686012 - 11685928
Alignment:
Q  79 tgtccgacaccgacaccacaccgacacata--attataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagt 163  Q
    ||||||||||||| || |||||||||||||  |||| | | || ||| |||| |||||||||||||||||||||||||| |||||||    
T  11686012 tgtccgacaccga-acgacaccgacacatataattacactaaattat-gcgactttctcaaattattagcggtgtcggcatgtcagt 11685928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 127 - 170
Target Start/End: Complemental strand, 14674294 - 14674251
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtg 170  Q
    |||||| ||||||||||||| |||||||||||||||| ||||||    
T  14674294 gattttttcaaattattagctgtgtcggcgtgtcagtgtccgtg 14674251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 127 - 170
Target Start/End: Complemental strand, 19579726 - 19579683
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtg 170  Q
    |||||||||||||||||||| |||||||||| ||||| ||||||    
T  19579726 gattttctcaaattattagctgtgtcggcgtatcagtgtccgtg 19579683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 128 - 187
Target Start/End: Complemental strand, 21137713 - 21137654
Alignment:
Q  128 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 187  Q
    ||||||||| ||||||| || ||||||||||||||| ||||||  |||||||| ||||||    
T  21137713 attttctcagattattaccgatgtcggcgtgtcagtgtccgtgttgtgtccggtgtccgt 21137654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 127 - 170
Target Start/End: Complemental strand, 34879375 - 34879332
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtg 170  Q
    |||||||||||||| ||||||||| ||||||||| |||||||||    
T  34879375 gattttctcaaatttttagcggtgccggcgtgtccgtatccgtg 34879332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 128 - 170
Target Start/End: Original strand, 5873548 - 5873590
Alignment:
Q  128 attttctcaaattattagcggtgtcggcgtgtcagtatccgtg 170  Q
    |||||||||||||||||| ||||||||| ||||||| ||||||    
T  5873548 attttctcaaattattagaggtgtcggcatgtcagtgtccgtg 5873590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 45 - 75
Target Start/End: Original strand, 24906250 - 24906280
Alignment:
Q  45 aactatgaagcacggacactcctcgaattag 75  Q
    |||||||||||||||||||||||||||||||    
T  24906250 aactatgaagcacggacactcctcgaattag 24906280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 128 - 158
Target Start/End: Complemental strand, 27932259 - 27932229
Alignment:
Q  128 attttctcaaattattagcggtgtcggcgtg 158  Q
    |||||||||||||||||||||||||||||||    
T  27932259 attttctcaaattattagcggtgtcggcgtg 27932229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 127 - 161
Target Start/End: Original strand, 28588708 - 28588742
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgtca 161  Q
    |||||||||||||||||| ||||||||||||||||    
T  28588708 gattttctcaaattattaccggtgtcggcgtgtca 28588742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 180
Target Start/End: Original strand, 36642803 - 36642849
Alignment:
Q  134 tcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccgg 180  Q
    ||||||||||| | |||||||||||||||| |||||| |||||||||    
T  36642803 tcaaattattaactgtgtcggcgtgtcagtgtccgtgtcgtgtccgg 36642849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 176
Target Start/End: Original strand, 19552577 - 19552626
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgt 176  Q
    |||||| ||||||||||| | |||||||||||||||| |||||| |||||    
T  19552577 gattttttcaaattattaactgtgtcggcgtgtcagtgtccgtgtcgtgt 19552626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 202
Target Start/End: Complemental strand, 30135336 - 30135264
Alignment:
Q  129 ttttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 202  Q
    |||| ||||||||||||  ||||||||||||| ||||| ||| ||||||| | ||||||||  |||||||||||    
T  30135336 ttttttcaaattattagttgtgtcggcgtgtcggtatctgtgtcgtgtcc-gtgtccgtatatgtgcttcatag 30135264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 154
Target Start/End: Original strand, 32766975 - 32767004
Alignment:
Q  125 gcgattttctcaaattattagcggtgtcgg 154  Q
    ||||||||||||||||||||||||||||||    
T  32766975 gcgattttctcaaattattagcggtgtcgg 32767004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 127 - 187
Target Start/End: Original strand, 13287433 - 13287493
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 187  Q
    |||||| ||||||||||| | |||||| ||||| ||| |||||| ||||||||| ||||||    
T  13287433 gattttttcaaattattatctgtgtcgacgtgttagtgtccgtgtcgtgtccggtgtccgt 13287493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 127 - 163
Target Start/End: Complemental strand, 31084348 - 31084312
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgtcagt 163  Q
    |||||| ||||||||||||| ||||||||||||||||    
T  31084348 gattttttcaaattattagctgtgtcggcgtgtcagt 31084312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 79 - 163
Target Start/End: Complemental strand, 41995543 - 41995460
Alignment:
Q  79 tgtccgacaccgacaccacaccgacacataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagt 163  Q
    ||||||||||||| ||  ||||||||| |||||| | |||| ||| | |||||| || |||||||||  ||||||||||||||||    
T  41995543 tgtccgacaccgatacggcaccgacacttaattacattgaattat-gtgattttttcgaattattagttgtgtcggcgtgtcagt 41995460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 55; Significance: 1e-22; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 128 - 202
Target Start/End: Complemental strand, 27945065 - 27944991
Alignment:
Q  128 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 202  Q
    |||||||||||||||||| ||||||||||||||||| |||||| ||||||||| |||||||| ||||||||||||    
T  27945065 attttctcaaattattagtggtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtatccgtgcttcatag 27944991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 128 - 202
Target Start/End: Complemental strand, 24105702 - 24105629
Alignment:
Q  128 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 202  Q
    ||||| ||||||||||||| |||||||||||||||| |||||| |||||||| | ||||||| ||||||||||||    
T  24105702 attttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccgta-tccgtatccgtgcttcatag 24105629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 77 - 159
Target Start/End: Original strand, 29787354 - 29787435
Alignment:
Q  77 catgtccgacaccgacaccacaccgacacataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgt 159  Q
    ||||||| |||||||||  ||||| ||||||||||| | |||| ||| | |||||||||||||||||||||||||||||||||    
T  29787354 catgtccaacaccgacattacaccaacacataattacactgaattat-gtgattttctcaaattattagcggtgtcggcgtgt 29787435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 127 - 180
Target Start/End: Original strand, 11722132 - 11722185
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccgg 180  Q
    |||||||||||||| |||||||||||||||||||||| |||||| |||||||||    
T  11722132 gattttctcaaattgttagcggtgtcggcgtgtcagtgtccgtgtcgtgtccgg 11722185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 79 - 189
Target Start/End: Complemental strand, 24339716 - 24339605
Alignment:
Q  79 tgtccgacaccgacaccacaccgacacat--aattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgt 176  Q
    |||||||||||||||| |||||||||| |  ||||| | |||| ||| | |||||| ||||||||||||| |||||||||||||| | ||| || |||||    
T  24339716 tgtccgacaccgacacgacaccgacacttgtaattacactgaattat-gtgattttttcaaattattagctgtgtcggcgtgtcaatgtccatgtcgtgt 24339618  T
Q  177 ccggagtccgtat 189  Q
    |||| ||||||||    
T  24339617 ccggtgtccgtat 24339605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 96 - 177
Target Start/End: Complemental strand, 19206107 - 19206025
Alignment:
Q  96 acaccgacacata--attataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtc 177  Q
    |||||||||||||  ||||||||||| ||| | |||||||||||||||||||||||||||||||||  || |||||| ||||||    
T  19206107 acaccgacacatataattataatgaattat-gtgattttctcaaattattagcggtgtcggcgtgttggtgtccgtgtcgtgtc 19206025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 79 - 163
Target Start/End: Complemental strand, 32308194 - 32308109
Alignment:
Q  79 tgtccgacaccgacaccacaccgacacata--attataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagt 163  Q
    ||||| |||||||||| |||| ||||||||  |||| | |||| ||| | |||||||||||||||||||||||||||||||||||||    
T  32308194 tgtccaacaccgacacgacactgacacatacaattacactgaattat-gtgattttctcaaattattagcggtgtcggcgtgtcagt 32308109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 47 - 157
Target Start/End: Complemental strand, 11700909 - 11700798
Alignment:
Q  47 ctatgaagcacggacactcctcgaattagccatgt--ccgacaccgacaccacaccgacacataattataatgaaatatagcgattttctcaaattatta 144  Q
    ||||||| || |||||||||||| ||||||| |||  |||||||||| || |||| |||||||||||| | |||| ||| | |||||| |||||||||||    
T  11700909 ctatgaatcagggacactcctcggattagccgtgtgtccgacaccgagacaacacagacacataattacattgaattat-gtgattttgtcaaattatta 11700811  T
Q  145 gcggtgtcggcgt 157  Q
     ||||||| ||||    
T  11700810 acggtgtcagcgt 11700798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 127 - 187
Target Start/End: Complemental strand, 1433479 - 1433419
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 187  Q
    |||||||||||||||||| |||||||||||||||| | |||||| ||||| ||| ||||||    
T  1433479 gattttctcaaattattaacggtgtcggcgtgtcaatgtccgtgtcgtgttcggtgtccgt 1433419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 47 - 207
Target Start/End: Original strand, 7328639 - 7328805
Alignment:
Q  47 ctatgaagcacggacactcctcgaattagccatgtccgacacc-----gacaccacaccgacacata--attataatgaaatatagcgattttctcaaat 139  Q
    |||||||||||| |||||| ||| ||||| | |||||||||||     ||||| |||||||||||||  |||| | | || ||| |  ||||||||||||    
T  7328639 ctatgaagcacgaacactcatcggattaggcgtgtccgacaccaacacgacacgacaccgacacatataattacactaaattat-gttattttctcaaat 7328737  T
Q  140 tattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatagtatat 207  Q
    ||||||| || ||| ||||| | | || ||| ||||| ||| |||||||| |||||||||||||||||    
T  7328738 tattagcagtatcgacgtgttaatgtctgtgtcgtgttcggtgtccgtatccgtgcttcatagtatat 7328805  T

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Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 131 - 202
Target Start/End: Complemental strand, 2034462 - 2034392
Alignment:
Q  131 ttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 202  Q
    ||||||||||||||| ||||||| ||||| |||||||||| |||||| | | ||||||| ||||||||||||    
T  2034462 ttctcaaattattagtggtgtcgacgtgtaagtatccgtgtcgtgtcagta-tccgtatccgtgcttcatag 2034392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 127 - 178
Target Start/End: Original strand, 2425767 - 2425818
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtcc 178  Q
    |||||||||||||||||| ||||| ||||||||||||||| ||| |||||||    
T  2425767 gattttctcaaattattaacggtgccggcgtgtcagtatctgtgtcgtgtcc 2425818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 127 - 202
Target Start/End: Original strand, 43027503 - 43027578
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 202  Q
    |||||| ||||||||||||| | |||| ||||||||| |||||| ||||||| | ||||| || ||||||||||||    
T  43027503 gattttttcaaattattagctgggtcgccgtgtcagtgtccgtgtcgtgtccagtgtccgcatccgtgcttcatag 43027578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 128 - 187
Target Start/End: Complemental strand, 43250017 - 43249958
Alignment:
Q  128 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 187  Q
    ||||||||||||||||| | |||||||||||||||| |||||| | ||||||| ||||||    
T  43250017 attttctcaaattattatccgtgtcggcgtgtcagtgtccgtgtcttgtccggtgtccgt 43249958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 127 - 169
Target Start/End: Original strand, 8046061 - 8046103
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgtcagtatccgt 169  Q
    ||||||||||||||||||| ||||| |||||||||||||||||    
T  8046061 gattttctcaaattattagtggtgttggcgtgtcagtatccgt 8046103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 96 - 163
Target Start/End: Complemental strand, 22484082 - 22484014
Alignment:
Q  96 acaccgacacata--attataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagt 163  Q
    |||||||||||||  |||||| |||| ||| || ||||||| ||||||||||||||||||||||||||||    
T  22484082 acaccgacacatataattatactgaattat-gcaattttctaaaattattagcggtgtcggcgtgtcagt 22484014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 127 - 169
Target Start/End: Complemental strand, 23191921 - 23191879
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgtcagtatccgt 169  Q
    ||||||||||||||||||||||||||||||| ||||| |||||    
T  23191921 gattttctcaaattattagcggtgtcggcgtatcagtgtccgt 23191879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 127 - 177
Target Start/End: Complemental strand, 26733329 - 26733279
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtc 177  Q
    |||||| |||||||||||||||||||| ||||||||| |||||| ||||||    
T  26733329 gattttgtcaaattattagcggtgtcgacgtgtcagtgtccgtgtcgtgtc 26733279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 158
Target Start/End: Complemental strand, 30731104 - 30731031
Alignment:
Q  84 gacaccgacaccacaccgacacataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtg 158  Q
    |||||| |||| ||||||||||| ||||| | |||| ||| | ||||||||||||||||| ||||||||||||||    
T  30731104 gacaccaacacgacaccgacacacaattacactgaattat-gtgattttctcaaattattcgcggtgtcggcgtg 30731031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 87 - 160
Target Start/End: Complemental strand, 11072362 - 11072290
Alignment:
Q  87 accgacaccacaccgacacataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtc 160  Q
    |||||||| ||||||||||||||||||| |||| ||||    |||| ||||||||||| |||||||||||||||    
T  11072362 accgacacgacaccgacacataattatattgaattata-tatttttttcaaattattatcggtgtcggcgtgtc 11072290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 129 - 178
Target Start/End: Complemental strand, 49107844 - 49107795
Alignment:
Q  129 ttttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtcc 178  Q
    |||||||||||||||||||||||||| |||||||  |||||| |||||||    
T  49107844 ttttctcaaattattagcggtgtcggtgtgtcagagtccgtgtcgtgtcc 49107795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 163
Target Start/End: Complemental strand, 20549816 - 20549780
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgtcagt 163  Q
    |||||||||||||||||||||||||||| ||||||||    
T  20549816 gattttctcaaattattagcggtgtcggtgtgtcagt 20549780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 127 - 166
Target Start/End: Complemental strand, 2948708 - 2948669
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgtcagtatc 166  Q
    |||||||| ||||||| |||||||||||||||||||||||    
T  2948708 gattttctaaaattatcagcggtgtcggcgtgtcagtatc 2948669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 79 - 163
Target Start/End: Original strand, 6630897 - 6630982
Alignment:
Q  79 tgtccgacaccgacaccacaccgacacata--attataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagt 163  Q
    ||||||||||| |||| ||| |||||||||  |||| | |||| || || || |||||||||||||||| |||||||||||||||||    
T  6630897 tgtccgacaccaacacgacatcgacacatataattacactgaatta-agtgactttctcaaattattagtggtgtcggcgtgtcagt 6630982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 127 - 170
Target Start/End: Original strand, 21828439 - 21828482
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtg 170  Q
    ||||||||||||||| || |||||||||||||||||| ||||||    
T  21828439 gattttctcaaattactaacggtgtcggcgtgtcagtgtccgtg 21828482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 128 - 159
Target Start/End: Complemental strand, 28155594 - 28155563
Alignment:
Q  128 attttctcaaattattagcggtgtcggcgtgt 159  Q
    ||||||||||||||||||||||||||||||||    
T  28155594 attttctcaaattattagcggtgtcggcgtgt 28155563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 127 - 201
Target Start/End: Complemental strand, 598233 - 598160
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcata 201  Q
    |||||||| ||||||||||||||||||  |||||||| |||||| | |||| || ||||||  ||||||||||||    
T  598233 gattttcttaaattattagcggtgtcgatgtgtcagtgtccgtgtcatgtctggtgtccgt-gtcgtgcttcata 598160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 128 - 178
Target Start/End: Complemental strand, 5236010 - 5235960
Alignment:
Q  128 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtcc 178  Q
    ||||||| |||||||||||||||||| ||||||||| || ||| |||||||    
T  5236010 attttcttaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgtcc 5235960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 79 - 145
Target Start/End: Complemental strand, 9933347 - 9933282
Alignment:
Q  79 tgtccgacaccgacaccacaccgacacataattataatgaaatatagcgattttctcaaattattag 145  Q
    |||||||||||||||| |||| ||||||||| | || |||||||| | |||||| ||||||||||||    
T  9933347 tgtccgacaccgacacgacactgacacataagtttactgaaatat-gtgattttttcaaattattag 9933282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 127 - 169
Target Start/End: Original strand, 20545270 - 20545312
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgtcagtatccgt 169  Q
    |||||| |||||||||||||||||| |||||||| ||||||||    
T  20545270 gattttttcaaattattagcggtgttggcgtgtccgtatccgt 20545312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 129 - 187
Target Start/End: Original strand, 26329418 - 26329476
Alignment:
Q  129 ttttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 187  Q
    |||||||||||||||| || ||||||||||||||| || ||| ||||||| | ||||||    
T  26329418 ttttctcaaattattaacgatgtcggcgtgtcagtgtctgtgtcgtgtccagtgtccgt 26329476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 178
Target Start/End: Original strand, 4017830 - 4017879
Alignment:
Q  129 ttttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtcc 178  Q
    |||||||||||||||| | ||||||||||||| || |||||| |||||||    
T  4017830 ttttctcaaattattatccgtgtcggcgtgtcggtgtccgtgtcgtgtcc 4017879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 75
Target Start/End: Complemental strand, 17852120 - 17852091
Alignment:
Q  46 actatgaagcacggacactcctcgaattag 75  Q
    ||||||||||||||||||||||||||||||    
T  17852120 actatgaagcacggacactcctcgaattag 17852091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 163
Target Start/End: Complemental strand, 25791675 - 25791642
Alignment:
Q  130 tttctcaaattattagcggtgtcggcgtgtcagt 163  Q
    |||||||||| |||||||||||||||||||||||    
T  25791675 tttctcaaataattagcggtgtcggcgtgtcagt 25791642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 11061110 - 11061162
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccg 179  Q
    |||||| ||||||||||||| ||||||| |||||||| |||||| ||| ||||    
T  11061110 gattttttcaaattattagctgtgtcggtgtgtcagtgtccgtgtcgtatccg 11061162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 47 - 75
Target Start/End: Complemental strand, 15680928 - 15680900
Alignment:
Q  47 ctatgaagcacggacactcctcgaattag 75  Q
    |||||||||||||||||||||||||||||    
T  15680928 ctatgaagcacggacactcctcgaattag 15680900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 127 - 187
Target Start/End: Complemental strand, 17851456 - 17851396
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 187  Q
    |||||||| |||||||||||||| |||  ||||| |||||| || ||||||||| ||||||    
T  17851456 gattttctaaaattattagcggtatcgatgtgtcggtatccatgtcgtgtccggtgtccgt 17851396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 127 - 163
Target Start/End: Complemental strand, 22868067 - 22868031
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgtcagt 163  Q
    |||||||||| |||||||| |||||||||||||||||    
T  22868067 gattttctcatattattagtggtgtcggcgtgtcagt 22868031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 53; Significance: 2e-21; HSPs: 45)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 79 - 180
Target Start/End: Complemental strand, 10294181 - 10294079
Alignment:
Q  79 tgtccgacaccgacaccacaccgacacata--attataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgt 176  Q
    ||||||||||| |||| |||||||||||||  |||| | |||||||| |||||| |||||||||||||||||| ||||| |||||||||||||| |||||    
T  10294181 tgtccgacaccaacacgacaccgacacatataattacattgaaatat-gcgattatctcaaattattagcggtatcggcatgtcagtatccgtgtcgtgt 10294083  T
Q  177 ccgg 180  Q
    ||||    
T  10294082 ccgg 10294079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 127 - 187
Target Start/End: Complemental strand, 9027203 - 9027143
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 187  Q
    |||| |||||||||||||||||||||||||||||||| |||||| ||||||||||||||||    
T  9027203 gattatctcaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtccggagtccgt 9027143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 127 - 202
Target Start/End: Original strand, 853893 - 853968
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 202  Q
    |||||| ||||||||||||  ||||||||||||||| ||||||| ||||||||| |||||||| |||| |||||||    
T  853893 gattttttcaaattattagttgtgtcggcgtgtcagcatccgtgtcgtgtccggtgtccgtatccgtgattcatag 853968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 79 - 187
Target Start/End: Complemental strand, 16766771 - 16766662
Alignment:
Q  79 tgtccgacaccgacaccacaccgacacat--aattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgt 176  Q
    |||||||||||||||| |||||||||| |  ||||| | |||| ||| | |||||| ||||||||||||| |||||||||||||||| ||| || |||||    
T  16766771 tgtccgacaccgacacgacaccgacacttgtaattacactgaattat-gtgattttttcaaattattagctgtgtcggcgtgtcagtgtccatgtcgtgt 16766673  T
Q  177 ccggagtccgt 187  Q
    |||| ||||||    
T  16766672 ccggtgtccgt 16766662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 127 - 187
Target Start/End: Original strand, 5000660 - 5000720
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 187  Q
    ||||||||| ||||||||||||||||| |||||||||||||||| | ||||||| ||||||    
T  5000660 gattttctcgaattattagcggtgtcgacgtgtcagtatccgtgtcatgtccggtgtccgt 5000720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 47 - 187
Target Start/End: Original strand, 5732474 - 5732604
Alignment:
Q  47 ctatgaagcacggacactcctcgaattagccatgtccgacaccgacaccacaccgacacataattataatgaaatatagcgattttctcaaattattagc 146  Q
    |||||||||| |||||||||||| ||||| | ||||||||||||||||         | ||||||| | | |||||| | |||||||||||||||||| |    
T  5732474 ctatgaagcatggacactcctcggattaggcgtgtccgacaccgacac---------atataattacactaaaatat-gtgattttctcaaattattaac 5732563  T
Q  147 ggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 187  Q
    ||||||||||||||||| ||| || ||||||| | ||||||    
T  5732564 ggtgtcggcgtgtcagtgtccatgtcgtgtccagtgtccgt 5732604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 134 - 202
Target Start/End: Original strand, 8365560 - 8365628
Alignment:
Q  134 tcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 202  Q
    ||||||||||||  |||||||||||||||| |||||| |||||| || |||||||| ||||||||||||    
T  8365560 tcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtctggtgtccgtatccgtgcttcatag 8365628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 128 - 200
Target Start/End: Complemental strand, 12696348 - 12696277
Alignment:
Q  128 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcat 200  Q
    ||||| ||||||||||||| |||||||||||||||| |||||| ||||||| | |||||||| ||||||||||    
T  12696348 attttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtcc-gtgtccgtatccgtgcttcat 12696277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 47 - 177
Target Start/End: Original strand, 8805524 - 8805656
Alignment:
Q  47 ctatgaagcacggacactcctcgaattagccatgtccgac---accgacaccacaccgacacataattataatgaaatatagcgattttctcaaattatt 143  Q
    ||||||||||||||||||||||| ||||| ||||||| ||    | ||||| ||||||||||||||||| | | || ||| | |||||||||||||||||    
T  8805524 ctatgaagcacggacactcctcggattaggcatgtcccacgtgtctgacactacaccgacacataattacactaaattat-gtgattttctcaaattatt 8805622  T
Q  144 agcggtgtcggcgtgtcagtatccgtgccgtgtc 177  Q
    ||| ||| || |||||| || || ||| ||||||    
T  8805623 agcagtgccgacgtgtcggtgtctgtgtcgtgtc 8805656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 79 - 187
Target Start/End: Original strand, 9107355 - 9107464
Alignment:
Q  79 tgtccgacaccgacaccacaccgacacat--aattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgt 176  Q
    |||||||||||||||| |||||||||| |  ||||| | |||| | | | |||||| ||||||||||||| |||||||||||| ||| |||||| |||||    
T  9107355 tgtccgacaccgacacgacaccgacacttgtaattacactgaatttt-gtgattttttcaaattattagctgtgtcggcgtgttagtgtccgtgtcgtgt 9107453  T
Q  177 ccggagtccgt 187  Q
    |||| ||||||    
T  9107454 ccggtgtccgt 9107464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 127 - 178
Target Start/End: Complemental strand, 9629408 - 9629357
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtcc 178  Q
    ||||||||||||||||| ||||||||||||||||| |||||||| |||||||    
T  9629408 gattttctcaaattattggcggtgtcggcgtgtcaatatccgtgtcgtgtcc 9629357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 127 - 202
Target Start/End: Original strand, 30866178 - 30866253
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 202  Q
    ||||||||||||||||||||||||| || ||||| || || ||| | ||||||| |||||||||||| ||||||||    
T  30866178 gattttctcaaattattagcggtgttggtgtgtcggtgtcagtgtcatgtccggtgtccgtattcgtacttcatag 30866253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 128 - 202
Target Start/End: Complemental strand, 6389767 - 6389693
Alignment:
Q  128 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 202  Q
    ||||||||||||||||| | |||||||||||| ||| |||||| ||||||||| ||| || | ||||||||||||    
T  6389767 attttctcaaattattatccgtgtcggcgtgtgagtgtccgtgtcgtgtccggtgtctgtgtccgtgcttcatag 6389693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 127 - 177
Target Start/End: Complemental strand, 9658904 - 9658854
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtc 177  Q
    |||||||| |||||||||||||||||||||||||||| |||||| ||||||    
T  9658904 gattttcttaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtc 9658854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 127 - 165
Target Start/End: Complemental strand, 19040377 - 19040339
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgtcagtat 165  Q
    |||||||||||||||||||||||||||||||||||||||    
T  19040377 gattttctcaaattattagcggtgtcggcgtgtcagtat 19040339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 134 - 202
Target Start/End: Complemental strand, 3398637 - 3398569
Alignment:
Q  134 tcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 202  Q
    ||||||||||||| |||||||||||||||| |||||| ||||| ||  |||||||| | ||||||||||    
T  3398637 tcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgttcgatgtccgtatccatgcttcatag 3398569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 127 - 187
Target Start/End: Complemental strand, 7938141 - 7938081
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 187  Q
    |||||| ||||||||||||| |||||||||||||||| ||| || ||||||||| ||||||    
T  7938141 gattttttcaaattattagctgtgtcggcgtgtcagtgtccatgtcgtgtccggtgtccgt 7938081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 128 - 176
Target Start/End: Complemental strand, 13851760 - 13851712
Alignment:
Q  128 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgt 176  Q
    |||||||||||||||||||||||||| ||||||||| |||||| |||||    
T  13851760 attttctcaaattattagcggtgtcgacgtgtcagtgtccgtgtcgtgt 13851712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 128 - 187
Target Start/End: Original strand, 7977865 - 7977924
Alignment:
Q  128 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 187  Q
    ||||| ||||||||||||| |||||||||||||||||||| || ||||||| | ||||||    
T  7977865 attttttcaaattattagctgtgtcggcgtgtcagtatccatgtcgtgtccagtgtccgt 7977924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 127 - 170
Target Start/End: Original strand, 20371144 - 20371187
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtg 170  Q
    ||||||||||||||||||||||||||||||||||| | ||||||    
T  20371144 gattttctcaaattattagcggtgtcggcgtgtcaatgtccgtg 20371187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 187
Target Start/End: Original strand, 34073337 - 34073441
Alignment:
Q  84 gacaccgacaccacaccgacacata--attataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccgga 181  Q
    ||||||||||| |||||||| ||||  |||| | |||| ||| | ||||||||||||||||||||| ||| ||| ||||||| |||||| ||||||| |     
T  34073337 gacaccgacacgacaccgacccatataattacactgaattat-gagattttctcaaattattagcgatgttggcatgtcagtgtccgtgtcgtgtccagt 34073435  T
Q  182 gtccgt 187  Q
    ||||||    
T  34073436 gtccgt 34073441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 127 - 180
Target Start/End: Original strand, 426548 - 426601
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccgg 180  Q
    |||||| ||||||||||| | |||||||||||||||| |||||| |||||||||    
T  426548 gattttttcaaattattaactgtgtcggcgtgtcagtgtccgtgtcgtgtccgg 426601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 127 - 168
Target Start/End: Original strand, 7265627 - 7265668
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgtcagtatccg 168  Q
    ||||||||||||||||||||||||| ||||||||||| ||||    
T  7265627 gattttctcaaattattagcggtgttggcgtgtcagtgtccg 7265668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 8777007 - 8777059
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccg 179  Q
    |||||| ||||||||||||  |||||||||||||||| |||||| ||||||||    
T  8777007 gattttttcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtccg 8777059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 187
Target Start/End: Complemental strand, 34595159 - 34595099
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 187  Q
    |||||| ||||||||||||  |||||||||||||| | |||||| ||||||||| ||||||    
T  34595159 gattttttcaaattattagttgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgt 34595099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 47 - 94
Target Start/End: Original strand, 426478 - 426525
Alignment:
Q  47 ctatgaagcacggacactcctcgaattagccatgtccgacaccgacac 94  Q
    ||||||||||||||||||||||  ||||| | ||||||||||||||||    
T  426478 ctatgaagcacggacactcctcagattaggcgtgtccgacaccgacac 426525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 127 - 170
Target Start/End: Original strand, 17841623 - 17841666
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtg 170  Q
    |||||| ||||||||||||| |||||||||||||||| ||||||    
T  17841623 gattttttcaaattattagctgtgtcggcgtgtcagtgtccgtg 17841666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 96 - 179
Target Start/End: Original strand, 31579229 - 31579311
Alignment:
Q  96 acaccgacacataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccg 179  Q
    ||||||||||||||||| | |||| ||| | |||||||||||||||||| |||||| || ||| |||| ||| || ||||||||    
T  31579229 acaccgacacataattacactgaattat-gtgattttctcaaattattaacggtgttggtgtggcagtgtccatgtcgtgtccg 31579311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 128 - 202
Target Start/End: Original strand, 25038106 - 25038180
Alignment:
Q  128 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 202  Q
    ||||||||||||||||| |||||||  |||||||||||| ||| ||| | |   |||||||| ||||||||||||    
T  25038106 attttctcaaattattaacggtgtcaacgtgtcagtatctgtgtcgtattcaatgtccgtatccgtgcttcatag 25038180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 127 - 201
Target Start/End: Complemental strand, 31959184 - 31959111
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcata 201  Q
    |||||| ||||||||||||| ||| |||||||||||| | |||| | ||||| | |||||||| |||||||||||    
T  31959184 gattttttcaaattattagctgtgacggcgtgtcagtgttcgtgtcatgtcc-gtgtccgtatccgtgcttcata 31959111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 45 - 75
Target Start/End: Original strand, 34073276 - 34073306
Alignment:
Q  45 aactatgaagcacggacactcctcgaattag 75  Q
    |||||||||||||||||||||||||||||||    
T  34073276 aactatgaagcacggacactcctcgaattag 34073306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 88
Target Start/End: Complemental strand, 2117175 - 2117134
Alignment:
Q  47 ctatgaagcacggacactcctcgaattagccatgtccgacac 88  Q
    ||||||||||||||||||||||  ||||| ||||||||||||    
T  2117175 ctatgaagcacggacactcctccgattaggcatgtccgacac 2117134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 160
Target Start/End: Complemental strand, 10842557 - 10842524
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgtc 160  Q
    |||||| |||||||||||||||||||||||||||    
T  10842557 gattttttcaaattattagcggtgtcggcgtgtc 10842524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 177
Target Start/End: Complemental strand, 26562759 - 26562664
Alignment:
Q  83 cgacaccgacaccacaccgacacata--attataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtc 177  Q
    |||||||||||| ||| |||||||||  |||| | |||| ||| | |||||||||||||| ||||| ||||||||||||| || | ||||| |||||    
T  26562759 cgacaccgacacgacatcgacacatataattacactgaattat-gtgattttctcaaatttttagcagtgtcggcgtgtccgtgttcgtgcggtgtc 26562664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 127 - 163
Target Start/End: Complemental strand, 677862 - 677826
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgtcagt 163  Q
    |||||||||||||||||| | ||||||||||||||||    
T  677862 gattttctcaaattattaacagtgtcggcgtgtcagt 677826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 129 - 202
Target Start/End: Complemental strand, 4877965 - 4877890
Alignment:
Q  129 ttttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccg--gagtccgtattcgtgcttcatag 202  Q
    |||| ||||||||||||| ||||||| |||||| |||||||| ||||| ||  | ||||||||  |||||||||||    
T  4877965 ttttttcaaattattagctgtgtcggtgtgtcactatccgtgtcgtgttcggcgtgtccgtatctgtgcttcatag 4877890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 127 - 203
Target Start/End: Complemental strand, 7930330 - 7930254
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatagt 203  Q
    |||||| |||||||||||   |||||||| ||||||| ||||| | |||||||| ||| |||| | |||||||||||    
T  7930330 gattttttcaaattattaattgtgtcggcatgtcagtgtccgttctgtgtccggtgtctgtatccatgcttcatagt 7930254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 127 - 163
Target Start/End: Original strand, 7996412 - 7996448
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgtcagt 163  Q
    |||||||||||||||||||| |||||||| |||||||    
T  7996412 gattttctcaaattattagcagtgtcggcatgtcagt 7996448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 127 - 163
Target Start/End: Complemental strand, 8022389 - 8022353
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgtcagt 163  Q
    |||||||||||||||||||| |||||||| |||||||    
T  8022389 gattttctcaaattattagcagtgtcggcatgtcagt 8022353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 127 - 163
Target Start/End: Original strand, 10339160 - 10339196
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgtcagt 163  Q
    ||||||||||||||| | |||||||||||||||||||    
T  10339160 gattttctcaaattaatcgcggtgtcggcgtgtcagt 10339196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 16833333 - 16833281
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccg 179  Q
    |||||| ||||||||||||  |||||||||||||||| || ||| ||||||||    
T  16833333 gattttttcaaattattagttgtgtcggcgtgtcagtgtctgtgtcgtgtccg 16833281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 127 - 163
Target Start/End: Original strand, 17341698 - 17341734
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgtcagt 163  Q
    |||||| ||||||||||| ||||||||||||||||||    
T  17341698 gattttatcaaattattaacggtgtcggcgtgtcagt 17341734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 128 - 160
Target Start/End: Original strand, 21395342 - 21395374
Alignment:
Q  128 attttctcaaattattagcggtgtcggcgtgtc 160  Q
    |||||||||||||||||||||||| ||||||||    
T  21395342 attttctcaaattattagcggtgttggcgtgtc 21395374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 127 - 163
Target Start/End: Original strand, 21424836 - 21424872
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgtcagt 163  Q
    |||||| |||||||||||||||||| |||||||||||    
T  21424836 gattttttcaaattattagcggtgttggcgtgtcagt 21424872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 79 - 163
Target Start/End: Original strand, 34290064 - 34290147
Alignment:
Q  79 tgtccgacaccgacaccacaccgacacataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagt 163  Q
    |||| ||||| ||||| ||||||||||||||||| | |||| ||| | |||| || |||||||||||  |||||||| |||||||    
T  34290064 tgtcggacactgacacgacaccgacacataattacactgaattat-gtgattctcgcaaattattagttgtgtcggcatgtcagt 34290147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 49; Significance: 5e-19; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 79 - 180
Target Start/End: Complemental strand, 22652050 - 22651948
Alignment:
Q  79 tgtccgacaccgacaccacaccgacacat--aattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgt 176  Q
    |||||||||||||||| |||||||||| |  ||||||| |||| ||| | |||||| ||||||||||||| |||||||||||||||| |||||| |||||    
T  22652050 tgtccgacaccgacacgacaccgacacttgtaattatattgaattat-gtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgt 22651952  T
Q  177 ccgg 180  Q
    ||||    
T  22651951 ccgg 22651948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 79 - 185
Target Start/End: Original strand, 29510289 - 29510396
Alignment:
Q  79 tgtccgacaccgacaccacaccgacacat--aattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgt 176  Q
    |||||||||||||||| |||||||||| |  ||||||| |||| | | | |||||| ||||||||||||| |||||||||||||||| |||||| |||||    
T  29510289 tgtccgacaccgacactacaccgacacttgtaattatactgaatttt-gtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgt 29510387  T
Q  177 ccggagtcc 185  Q
    |||| ||||    
T  29510388 ccggtgtcc 29510396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 134 - 202
Target Start/End: Original strand, 25192388 - 25192456
Alignment:
Q  134 tcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 202  Q
    ||||||||||||| |||||||||||||||| |||||  ||||||||  |||||||||||||||||||||    
T  25192388 tcaaattattagctgtgtcggcgtgtcagtgtccgtatcgtgtccgatgtccgtattcgtgcttcatag 25192456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 127 - 193
Target Start/End: Original strand, 926822 - 926888
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgt 193  Q
    |||||||||||||||||||  |||| ||||||||||| |||||| ||||||||| |||||| |||||    
T  926822 gattttctcaaattattaggagtgttggcgtgtcagtgtccgtgtcgtgtccggtgtccgtgttcgt 926888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 127 - 180
Target Start/End: Complemental strand, 27213572 - 27213519
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccgg 180  Q
    |||||||| ||||||||||| ||||||||||||| ||||||||| |||||||||    
T  27213572 gattttctgaaattattagcagtgtcggcgtgtctgtatccgtgtcgtgtccgg 27213519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 134 - 202
Target Start/End: Original strand, 126390 - 126457
Alignment:
Q  134 tcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 202  Q
    |||||||||||||||||| |||||||||||||||||  ||||||| | || ||||| ||||||||||||    
T  126390 tcaaattattagcggtgttggcgtgtcagtatccgtatcgtgtcc-gtgtgcgtatccgtgcttcatag 126457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 127 - 202
Target Start/End: Original strand, 13436998 - 13437073
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 202  Q
    |||||| ||||||||||||| |||||||||||||||| ||| || | ||||||| |||| | | ||||||||||||    
T  13436998 gattttttcaaattattagctgtgtcggcgtgtcagtgtccatgtcatgtccggtgtccatgtccgtgcttcatag 13437073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 127 - 170
Target Start/End: Original strand, 31109552 - 31109595
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtg 170  Q
    |||||||||||||||||| |||||||||||||||||| ||||||    
T  31109552 gattttctcaaattattaacggtgtcggcgtgtcagtgtccgtg 31109595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 127 - 189
Target Start/End: Original strand, 24362236 - 24362298
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtat 189  Q
    |||| ||||||||||||||||||||||||||||| || || ||| ||| ||||| ||||||||    
T  24362236 gattctctcaaattattagcggtgtcggcgtgtcggtgtctgtgtcgtatccggtgtccgtat 24362298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 127 - 160
Target Start/End: Original strand, 39954313 - 39954346
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgtc 160  Q
    ||||||||||||||||||||||||||||||||||    
T  39954313 gattttctcaaattattagcggtgtcggcgtgtc 39954346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 167
Target Start/End: Original strand, 31236611 - 31236651
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgtcagtatcc 167  Q
    |||||||||||||||||||| ||||||||||||| ||||||    
T  31236611 gattttctcaaattattagcagtgtcggcgtgtccgtatcc 31236651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 170
Target Start/End: Original strand, 37283812 - 37283887
Alignment:
Q  94 ccacaccgacacataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtg 170  Q
    ||||||||||||||||||| | |||| ||| | |||||||||| ||||||||||||| | || ||||||| ||||||    
T  37283812 ccacaccgacacataattacactgaattat-gtgattttctcagattattagcggtgcccgcatgtcagtgtccgtg 37283887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 127 - 202
Target Start/End: Original strand, 4298920 - 4298994
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 202  Q
    |||||| ||||||||||| | |||||||||||| |||||| ||| ||||||| | |||| ||| ||||||||||||    
T  4298920 gattttttcaaattattaactgtgtcggcgtgttagtatctgtgtcgtgtcc-gtgtccatatccgtgcttcatag 4298994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 127 - 202
Target Start/End: Complemental strand, 11944690 - 11944615
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 202  Q
    |||||| ||||||||||| | |||||||||||| || ||||||| |||||  || ||||||||  |||||||||||    
T  11944690 gattttatcaaattattaacagtgtcggcgtgttagcatccgtgtcgtgtttggtgtccgtatctgtgcttcatag 11944615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 127 - 189
Target Start/End: Original strand, 4673459 - 4673521
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtat 189  Q
    |||||| ||||||||||| | |||||||||||||||| || ||| ||||||||  ||||||||    
T  4673459 gattttttcaaattattatctgtgtcggcgtgtcagtgtctgtgtcgtgtccgatgtccgtat 4673521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 127 - 161
Target Start/End: Complemental strand, 27101540 - 27101506
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgtca 161  Q
    |||||| ||||||||||||||||||||||||||||    
T  27101540 gattttttcaaattattagcggtgtcggcgtgtca 27101506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 127 - 169
Target Start/End: Complemental strand, 34897110 - 34897068
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgtcagtatccgt 169  Q
    ||||||||||||||||||||||||||| |||||| || |||||    
T  34897110 gattttctcaaattattagcggtgtcgacgtgtctgtgtccgt 34897068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 202
Target Start/End: Original strand, 11927076 - 11927195
Alignment:
Q  84 gacaccgacaccacaccgacacata--attataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccgga 181  Q
    |||||| |||| |||||||||||||  |||| | |||| ||| | |||||| ||||||||||| | |||||||||| | || ||||||| |||||  ||     
T  11927076 gacaccaacacgacaccgacacatataattacactgaattat-gtgattttatcaaattattaacagtgtcggcgtattagcatccgtgtcgtgtttggt 11927174  T
Q  182 gtccgtattcgtgcttcatag 202  Q
    ||||||||  |||||||||||    
T  11927175 gtccgtatctgtgcttcatag 11927195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 160
Target Start/End: Original strand, 13844630 - 13844663
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgtc 160  Q
    |||||||||||||||||||| |||||||||||||    
T  13844630 gattttctcaaattattagcagtgtcggcgtgtc 13844663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 127 - 187
Target Start/End: Original strand, 2572090 - 2572150
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 187  Q
    |||||| ||||||||||||  |||||| |||||| ||||||||| ||||||| | ||||||    
T  2572090 gattttttcaaattattaggtgtgtcgacgtgtcggtatccgtgtcgtgtccagtgtccgt 2572150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 20873094 - 20873042
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccg 179  Q
    |||||| ||||||||||| |  ||||||||||||||| |||||| ||||||||    
T  20873094 gattttttcaaattattatctatgtcggcgtgtcagtgtccgtgtcgtgtccg 20873042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 79 - 175
Target Start/End: Complemental strand, 29776108 - 29776013
Alignment:
Q  79 tgtccgacaccgacaccacaccgacacataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtg 175  Q
    |||||||||| |||   ||||||||| ||||||||| |||| ||  | |||||||||||||||||||| |||||| | ||||| | |||||| ||||    
T  29776108 tgtccgacactgacttaacaccgacatataattatactgaattac-gtgattttctcaaattattagcagtgtcgacttgtcaatgtccgtgtcgtg 29776013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 48; Significance: 2e-18; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 91 - 202
Target Start/End: Original strand, 21782817 - 21782927
Alignment:
Q  91 acaccacaccgacacataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtatt 190  Q
    |||| |||||| |||||||||| | |||| ||| | |||||||||||||||||||| |||||||||||||||| |  ||| ||||||| | ||| |||||    
T  21782817 acacgacaccggcacataattacactgaattat-gtgattttctcaaattattagcagtgtcggcgtgtcagtgtttgtgtcgtgtccagtgtctgtatt 21782915  T
Q  191 cgtgcttcatag 202  Q
    ||||||||||||    
T  21782916 cgtgcttcatag 21782927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 138 - 202
Target Start/End: Complemental strand, 33519800 - 33519736
Alignment:
Q  138 attattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 202  Q
    ||||||||||||||||| ||||||||||||| | ||||||||| |||||||| ||||||||||||    
T  33519800 attattagcggtgtcggtgtgtcagtatccgcgtcgtgtccggtgtccgtatccgtgcttcatag 33519736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 127 - 202
Target Start/End: Original strand, 20539708 - 20539783
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 202  Q
    |||||| ||||||||||||| |||||| ||||||||| |||||| ||||||| | |||||||| ||||||||||||    
T  20539708 gattttttcaaattattagctgtgtcgacgtgtcagtgtccgtgtcgtgtccagtgtccgtatccgtgcttcatag 20539783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 96 - 187
Target Start/End: Complemental strand, 4332981 - 4332891
Alignment:
Q  96 acaccgacacataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 187  Q
    ||||||||||||||||| | |||| ||| | ||||||| |||||||||| | |||||||| ||| |||||| ||||||||||||| ||||||    
T  4332981 acaccgacacataattacattgaattat-gtgattttcccaaattattatcagtgtcggcatgtaagtatctgtgccgtgtccggtgtccgt 4332891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 127 - 177
Target Start/End: Complemental strand, 21616787 - 21616737
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtc 177  Q
    |||||||||||||||||||||||||||||||||| || |||||| ||||||    
T  21616787 gattttctcaaattattagcggtgtcggcgtgtccgtgtccgtgtcgtgtc 21616737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 129 - 202
Target Start/End: Original strand, 19536434 - 19536507
Alignment:
Q  129 ttttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 202  Q
    |||| ||||||||||||  |||||||||||||| | |||||| ||||||||| ||||||||  |||||||||||    
T  19536434 ttttttcaaattattagttgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgtatctgtgcttcatag 19536507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 130 - 203
Target Start/End: Complemental strand, 23718048 - 23717976
Alignment:
Q  130 tttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatagt 203  Q
    ||||||||||||||||||||||||| |||||||| |||||| | ||||| | ||| |||| |||||||||||||    
T  23718048 tttctcaaattattagcggtgtcggtgtgtcagtgtccgtgtcatgtcc-gtgtctgtatccgtgcttcatagt 23717976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 130 - 203
Target Start/End: Complemental strand, 24105720 - 24105648
Alignment:
Q  130 tttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatagt 203  Q
    ||||||||||||||||||||||||| |||||||| |||||| | ||||| | ||| |||| |||||||||||||    
T  24105720 tttctcaaattattagcggtgtcggtgtgtcagtgtccgtgtcatgtcc-gtgtctgtatccgtgcttcatagt 24105648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 96 - 154
Target Start/End: Complemental strand, 1328033 - 1327976
Alignment:
Q  96 acaccgacacataattataatgaaatatagcgattttctcaaattattagcggtgtcgg 154  Q
    ||||||||||||||||||| |||| | ||  ||||||||||||||||||||||||||||    
T  1328033 acaccgacacataattatactgaattttat-gattttctcaaattattagcggtgtcgg 1327976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 79 - 177
Target Start/End: Original strand, 36409614 - 36409711
Alignment:
Q  79 tgtccgacaccgacaccacaccgacacataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtc 177  Q
    |||| |||||| |||  ||||||||||||||||| | | || ||| | |||||| ||||||||| |||||||||||| ||| |||||||||| ||||||    
T  36409614 tgtcagacaccaacatgacaccgacacataattacactaaattat-gtgattttttcaaattatcagcggtgtcggcatgtgagtatccgtgtcgtgtc 36409711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 102 - 187
Target Start/End: Complemental strand, 18276570 - 18276486
Alignment:
Q  102 acacataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 187  Q
    ||||||||||| | |||| || || ||||||||||||||||||||||||||||| | ||||| || ||  ||||||||| ||||||    
T  18276570 acacataattacactgaatta-agtgattttctcaaattattagcggtgtcggcatatcagtgtctgtatcgtgtccggtgtccgt 18276486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 201
Target Start/End: Complemental strand, 21624282 - 21624217
Alignment:
Q  136 aaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcata 201  Q
    ||||||||||| |||||||||||||||| || ||| ||||| ||| |||||||| || ||||||||    
T  21624282 aaattattagctgtgtcggcgtgtcagtgtctgtgtcgtgttcggtgtccgtatccgggcttcata 21624217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 160
Target Start/End: Complemental strand, 19574078 - 19573970
Alignment:
Q  47 ctatgaagcacggacactcctcgaattagccatgtccgacaccgacaccacaccgacacataattataatgaaatatagcgattttctcaaattattagc 146  Q
    |||||||||| ||||||||||||||||||   ||||||||||||||||  ||||     ||||||| | |||| ||| |  ||||||| ||||||||| |    
T  19574078 ctatgaagcatggacactcctcgaattaggtgtgtccgacaccgacacgccacc----tataattacactgaattat-gttattttcttaaattattatc 19573984  T
Q  147 ggtgtcggcgtgtc 160  Q
    ||||||||||||||    
T  19573983 ggtgtcggcgtgtc 19573970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 79 - 152
Target Start/End: Complemental strand, 44860394 - 44860320
Alignment:
Q  79 tgtccgacaccgacaccacaccgacacata--attataatgaaatatagcgattttctcaaattattagcggtgtc 152  Q
    ||||| ||||| |||| |||||||||||||  |||| | |||| ||| ||||||||||||||||||||||||||||    
T  44860394 tgtccaacaccaacacgacaccgacacatataattacactgaattat-gcgattttctcaaattattagcggtgtc 44860320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 77 - 165
Target Start/End: Original strand, 18420417 - 18420506
Alignment:
Q  77 catgtccgacaccgacaccacaccgacac--ataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtat 165  Q
    |||||||||||  ||||| ||||||||||  ||||||  | |||| ||| | |||||||||||||||||||| |||| |||||||||||||    
T  18420417 catgtccgacatggacacaacaccgacacttataattgcattgaattat-gtgattttctcaaattattagcagtgttggcgtgtcagtat 18420506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 47 - 94
Target Start/End: Original strand, 19536361 - 19536408
Alignment:
Q  47 ctatgaagcacggacactcctcgaattagccatgtccgacaccgacac 94  Q
    |||||||||| |||||||||||| ||||| | ||||||||||||||||    
T  19536361 ctatgaagcatggacactcctcggattaggcgtgtccgacaccgacac 19536408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 127 - 162
Target Start/End: Original strand, 37411278 - 37411313
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgtcag 162  Q
    ||||||||||||||||||||||||||||| ||||||    
T  37411278 gattttctcaaattattagcggtgtcggcatgtcag 37411313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 127 - 201
Target Start/End: Original strand, 38117193 - 38117261
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcata 201  Q
    |||||| ||||||||||||| ||||||||||||||      ||| ||||||||| |||||||| |||||||||||    
T  38117193 gattttttcaaattattagctgtgtcggcgtgtca------gtgtcgtgtccggtgtccgtatccgtgcttcata 38117261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 129 - 203
Target Start/End: Original strand, 14996260 - 14996333
Alignment:
Q  129 ttttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatagt 203  Q
    |||| ||||||||||||| |||||||| ||||||| |||||| | ||| | | |||||||| |||||||||||||    
T  14996260 ttttttcaaattattagctgtgtcggcttgtcagtgtccgtgtcatgt-ctgcgtccgtatccgtgcttcatagt 14996333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 94
Target Start/End: Original strand, 18255945 - 18255991
Alignment:
Q  48 tatgaagcacggacactcctcgaattagccatgtccgacaccgacac 94  Q
    |||||||||||||||||||| | ||||| | ||||||||||||||||    
T  18255945 tatgaagcacggacactccttggattaggcgtgtccgacaccgacac 18255991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 128 - 203
Target Start/End: Original strand, 21374734 - 21374810
Alignment:
Q  128 attttctcaaattattagcggtgtcggcgtgtcagtatccgtg--ccgtgtccggagtccgtattcgtgcttcatagt 203  Q
    ||||| ||||||||||||| |||||||||||| ||| ||||||  | |||||| | |||||||| |||||||||||||    
T  21374734 attttttcaaattattagctgtgtcggcgtgttagtgtccgtgtccggtgtcc-gtgtccgtatccgtgcttcatagt 21374810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 97 - 187
Target Start/End: Complemental strand, 28412404 - 28412315
Alignment:
Q  97 caccgacacataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 187  Q
    |||||||||||||||| | |||| ||| | |||||| ||||||||||| |||||| | ||||| ||| |||||| |||||| || ||||||    
T  28412404 caccgacacataattacactgaattat-gtgattttatcaaattattaacggtgttgacgtgttagtgtccgtgtcgtgtctggtgtccgt 28412315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 127 - 185
Target Start/End: Complemental strand, 31018615 - 31018557
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtcc 185  Q
    |||||||| |||||||||||||||| ||||||||||| ||| || ||| ||||| ||||    
T  31018615 gattttctgaaattattagcggtgttggcgtgtcagtgtccatgtcgtatccggtgtcc 31018557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 94
Target Start/End: Original strand, 34691770 - 34691816
Alignment:
Q  48 tatgaagcacggacactcctcgaattagccatgtccgacaccgacac 94  Q
    |||||| ||||||||||||||| ||||| | ||||||||||||||||    
T  34691770 tatgaaacacggacactcctcggattaggcgtgtccgacaccgacac 34691816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 94
Target Start/End: Original strand, 34714182 - 34714228
Alignment:
Q  48 tatgaagcacggacactcctcgaattagccatgtccgacaccgacac 94  Q
    |||||| ||||||||||||||| ||||| | ||||||||||||||||    
T  34714182 tatgaaacacggacactcctcggattaggcgtgtccgacaccgacac 34714228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 203
Target Start/End: Complemental strand, 2331863 - 2331743
Alignment:
Q  82 ccgacaccgacaccacaccgacacataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccgga 181  Q
    ||||||| ||||| |||||||||||||| || | |||| ||| | ||||||||||||||||||  |||||  |||||||| | |||||| || || ||      
T  2331863 ccgacactgacacgacaccgacacataaatacactgaattat-gtgattttctcaaattattaatggtgtttgcgtgtcaatgtccgtgtcgcgttcgat 2331765  T
Q  182 gtccgtattcgtgcttcatagt 203  Q
    ||| || | |||||||||||||    
T  2331764 gtctgtgtccgtgcttcatagt 2331743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 189
Target Start/End: Original strand, 4142875 - 4142936
Alignment:
Q  128 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtat 189  Q
    ||||||| ||||| |||| ||||||||||||||||| |||| | ||||| ||| ||||||||    
T  4142875 attttcttaaattgttagtggtgtcggcgtgtcagtgtccgggtcgtgttcggtgtccgtat 4142936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 169
Target Start/End: Complemental strand, 21091747 - 21091706
Alignment:
Q  128 attttctcaaattattagcggtgtcggcgtgtcagtatccgt 169  Q
    ||||||| ||||||||||||||||||| |||||||| |||||    
T  21091747 attttcttaaattattagcggtgtcggtgtgtcagtgtccgt 21091706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 127 - 163
Target Start/End: Complemental strand, 896236 - 896200
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgtcagt 163  Q
    |||||||||||| ||||||| ||||||||||||||||    
T  896236 gattttctcaaactattagcagtgtcggcgtgtcagt 896200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 128 - 176
Target Start/End: Original strand, 10535794 - 10535842
Alignment:
Q  128 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgt 176  Q
    ||||||||||||||||| |||||||||||| | |||||| ||| |||||    
T  10535794 attttctcaaattattatcggtgtcggcgtattagtatctgtgtcgtgt 10535842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 30404884 - 30404936
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccg 179  Q
    |||||| ||||||||||| | |||||||||||||||| |||||| | ||||||    
T  30404884 gattttttcaaattattaaccgtgtcggcgtgtcagtgtccgtgtcatgtccg 30404936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 127 - 159
Target Start/End: Complemental strand, 31284073 - 31284041
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgt 159  Q
    |||||||||||||||||||| ||||||||||||    
T  31284073 gattttctcaaattattagcagtgtcggcgtgt 31284041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 47 - 83
Target Start/End: Original strand, 42511322 - 42511358
Alignment:
Q  47 ctatgaagcacggacactcctcgaattagccatgtcc 83  Q
    ||||||||||||||||||||||| ||||||| |||||    
T  42511322 ctatgaagcacggacactcctcggattagccgtgtcc 42511358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 128 - 160
Target Start/End: Original strand, 42832311 - 42832343
Alignment:
Q  128 attttctcaaattattagcggtgtcggcgtgtc 160  Q
    ||||||||||||||||||||||||||| |||||    
T  42832311 attttctcaaattattagcggtgtcggtgtgtc 42832343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 127 - 203
Target Start/End: Complemental strand, 13425 - 13349
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatagt 203  Q
    |||||||||||||||||||  |||||||||||||||| |||||| | | ||||| |||||||| |||||||||||||    
T  13425 gattttctcaaattattagttgtgtcggcgtgtcagtgtccgtgtcatctccggtgtccgtatccgtgcttcatagt 13349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 47 - 202
Target Start/End: Complemental strand, 20279 - 20122
Alignment:
Q  47 ctatgaagcacggac---actcctcgaattagccatgtccgacaccgacaccacaccgacacat--aattataatgaaatatagcgattttctcaaatta 141  Q
    |||||||||||||||   |||||||| ||||| | |||||  ||||||||| |||| ||||| |  ||||| | |||| ||| | |||||| ||||||||    
T  20279 ctatgaagcacggactgtactcctcggattaggcgtgtcc--caccgacacgacactgacacttgtaattacactgaattat-gtgattttttcaaatta 20183  T
Q  142 ttagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 202  Q
    ||||| |||||||||||||| | |||||| ||||||||| ||||||||  |||||||||||    
T  20182 ttagctgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgtatctgtgcttcatag 20122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 21902 - 21978
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatagt 203  Q
    |||||||||||||||||||  |||||||||||||||| |||||| | | ||||| |||||||| |||||||||||||    
T  21902 gattttctcaaattattagttgtgtcggcgtgtcagtgtccgtgtcatctccggtgtccgtatccgtgcttcatagt 21978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 45; Significance: 1e-16; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 6427375 - 6427323
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccg 179  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  6427375 gattttctcaaattattagcggtgttggcgtgtcagtgtccgtgccgtgtccg 6427323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 127 - 187
Target Start/End: Complemental strand, 40917776 - 40917716
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 187  Q
    |||||| ||||||||||||| ||||||||||||||||||||||| ||||||||| ||||||    
T  40917776 gattttttcaaattattagctgtgtcggcgtgtcagtatccgtgtcgtgtccggtgtccgt 40917716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 127 - 186
Target Start/End: Original strand, 398799 - 398858
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccg 186  Q
    |||||| |||||||||||||||||||||||||||||| |||||| ||||||||| |||||    
T  398799 gattttttcaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccg 398858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 2896155 - 2896207
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccg 179  Q
    ||||||||||||||||||||||||||||||||||||| ||||||  |||||||    
T  2896155 gattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgttgtgtccg 2896207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 48 - 194
Target Start/End: Original strand, 10572535 - 10572690
Alignment:
Q  48 tatgaagcacggacactcctcgaattagccatgtcc--------gacaccgacaccacaccgacacat--aattataatgaaatatagcgattttctcaa 137  Q
    |||||||||||||||||||| ||||||| | |||||        |||||| |||| ||||||||||||  ||||| |  ||| ||| | |||||||||||    
T  10572535 tatgaagcacggacactccttgaattaggcgtgtccacgtgcctgacaccaacacaacaccgacacatttaattacaccgaattat-gtgattttctcaa 10572633  T
Q  138 attattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtg 194  Q
    |||||||| ||||||||||||||||| | | || ||||||||| |||||||| ||||    
T  10572634 attattagtggtgtcggcgtgtcagtgttcatgtcgtgtccggtgtccgtatccgtg 10572690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 128 - 203
Target Start/End: Original strand, 5376535 - 5376609
Alignment:
Q  128 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatagt 203  Q
    ||||||| |||||||||||||||||||||||| ||| |||||| |||||||||| || |||| ||||| |||||||    
T  5376535 attttcttaaattattagcggtgtcggcgtgttagtgtccgtgtcgtgtccgga-tctgtatacgtgcctcatagt 5376609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 127 - 202
Target Start/End: Original strand, 5927374 - 5927449
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 202  Q
    |||||| ||||||||||||| ||||  |||||||||| |||||| ||||||||| |||||||| ||||||| ||||    
T  5927374 gattttttcaaattattagcagtgttagcgtgtcagtgtccgtgtcgtgtccggtgtccgtatccgtgcttaatag 5927449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 47 - 100
Target Start/End: Original strand, 48547938 - 48547991
Alignment:
Q  47 ctatgaagcacggacactcctcgaattagccatgtccgacaccgacaccacacc 100  Q
    ||||||||||||||||||||||||||||| | | |||||||||||||| |||||    
T  48547938 ctatgaagcacggacactcctcgaattaggcgtatccgacaccgacacgacacc 48547991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 127 - 171
Target Start/End: Original strand, 12443494 - 12443538
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgc 171  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||    
T  12443494 gattttctcaaattattagctgtgtcggcgtgtccgtatccgtgc 12443538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 127 - 163
Target Start/End: Original strand, 17831565 - 17831601
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgtcagt 163  Q
    |||||||||||||||||||||||||||||||||||||    
T  17831565 gattttctcaaattattagcggtgtcggcgtgtcagt 17831601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 127 - 163
Target Start/End: Complemental strand, 36878486 - 36878450
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgtcagt 163  Q
    |||||||||||||||||||||||||||||||||||||    
T  36878486 gattttctcaaattattagcggtgtcggcgtgtcagt 36878450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 88 - 180
Target Start/End: Original strand, 1486703 - 1486796
Alignment:
Q  88 ccgacaccacaccgacac--ataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccgg 180  Q
    ||||||| ||||||||||  ||||||| | |||| ||| | |||||| ||||||||||||| ||||| ||||||||||||||||| ||| |||||    
T  1486703 ccgacacgacaccgacacttataattacactgaattat-gtgattttttcaaattattagctgtgtcagcgtgtcagtatccgtgtcgtatccgg 1486796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 87 - 187
Target Start/End: Complemental strand, 38503386 - 38503285
Alignment:
Q  87 accgacaccacaccgacacata--attataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtc 184  Q
    |||||||  |||||||||||||  |||| | |||||||||  |||||||||||||||||||||||||||| |||| ||| |||||| | ||||| | |||    
T  38503386 accgacaggacaccgacacatataattacactgaaatatat-gattttctcaaattattagcggtgtcggtgtgttagtgtccgtgtcatgtcccgtgtc 38503288  T
Q  185 cgt 187  Q
    |||    
T  38503287 cgt 38503285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 45 - 148
Target Start/End: Complemental strand, 44482343 - 44482234
Alignment:
Q  45 aactatgaagcacggacactcctcgaattagc-----catgtccgacaccgacaccacaccgacac--ataattataatgaaatatagcgattttctcaa 137  Q
    ||||||| ||||||||||||||||| ||||||     | |||||||||||||||| ||||||||||  ||||||| | |||| ||| | |||||||||||    
T  44482343 aactatggagcacggacactcctcggattagctgtgtcgtgtccgacaccgacacgacaccgacacatataattacactgaattat-gtgattttctcaa 44482245  T
Q  138 attattagcgg 148  Q
    ||||| |||||    
T  44482244 attataagcgg 44482234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 134 - 189
Target Start/End: Original strand, 48040503 - 48040558
Alignment:
Q  134 tcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtat 189  Q
    ||||||||||| | |||||||||||||||| |||||| ||||||||| ||||||||    
T  48040503 tcaaattattatctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtat 48040558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 102 - 180
Target Start/End: Complemental strand, 1262933 - 1262856
Alignment:
Q  102 acacataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccgg 180  Q
    |||| |||||||| |||| ||| | |||||||||||||||||||| ||||||||||||| || | |||| |||||||||    
T  1262933 acacttaattatattgaattat-gtgattttctcaaattattagctgtgtcggcgtgtccgtgttcgtgtcgtgtccgg 1262856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 127 - 177
Target Start/End: Complemental strand, 9709845 - 9709795
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtc 177  Q
    ||||||||||||||||||||||||| ||| ||||||| |||||| ||||||    
T  9709845 gattttctcaaattattagcggtgtaggcatgtcagtgtccgtgtcgtgtc 9709795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 127 - 177
Target Start/End: Complemental strand, 34298461 - 34298411
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtc 177  Q
    ||||||||||||||||||| |||||||| |||||||| |||||| ||||||    
T  34298461 gattttctcaaattattagtggtgtcggtgtgtcagtttccgtgtcgtgtc 34298411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 128 - 202
Target Start/End: Original strand, 39130802 - 39130876
Alignment:
Q  128 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 202  Q
    ||||||| |||||||||   ||||| |||||||| ||||| || ||||||||| |||||||| ||||||||||||    
T  39130802 attttctaaaattattaatagtgtcagcgtgtcaatatccatgtcgtgtccggtgtccgtatccgtgcttcatag 39130876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 163
Target Start/End: Original strand, 19562655 - 19562691
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgtcagt 163  Q
    |||||||||||||||||||| ||||||||||||||||    
T  19562655 gattttctcaaattattagcagtgtcggcgtgtcagt 19562691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 128 - 163
Target Start/End: Original strand, 609493 - 609528
Alignment:
Q  128 attttctcaaattattagcggtgtcggcgtgtcagt 163  Q
    |||||||||||||||||| |||||||||||||||||    
T  609493 attttctcaaattattagtggtgtcggcgtgtcagt 609528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 127 - 170
Target Start/End: Original strand, 6415035 - 6415078
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtg 170  Q
    ||||||||||||| ||||||| ||||||||||||||| ||||||    
T  6415035 gattttctcaaataattagcgatgtcggcgtgtcagtgtccgtg 6415078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 127 - 202
Target Start/End: Complemental strand, 31015068 - 31014993
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 202  Q
    |||||||||||||||||||| |||| |||| ||||||  ||||| |||| |||| ||| || | ||||||||||||    
T  31015068 gattttctcaaattattagctgtgtaggcgcgtcagtgcccgtgtcgtgcccggtgtctgtgtccgtgcttcatag 31014993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 127 - 170
Target Start/End: Original strand, 46348417 - 46348460
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtg 170  Q
    |||||| ||||||||||||| |||||||||||||||| ||||||    
T  46348417 gattttttcaaattattagctgtgtcggcgtgtcagtgtccgtg 46348460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 128 - 179
Target Start/End: Original strand, 48450622 - 48450673
Alignment:
Q  128 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccg 179  Q
    ||||| ||||||||||||| |||| ||||||||||| |||||| ||||||||    
T  48450622 attttttcaaattattagctgtgttggcgtgtcagtgtccgtgtcgtgtccg 48450673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 129 - 163
Target Start/End: Original strand, 3490426 - 3490460
Alignment:
Q  129 ttttctcaaattattagcggtgtcggcgtgtcagt 163  Q
    |||||||||||||||||| ||||||||||||||||    
T  3490426 ttttctcaaattattagcagtgtcggcgtgtcagt 3490460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 127 - 161
Target Start/End: Original strand, 10475011 - 10475045
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgtca 161  Q
    ||||||||||| |||||||||||||||||||||||    
T  10475011 gattttctcaagttattagcggtgtcggcgtgtca 10475045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 127 - 193
Target Start/End: Original strand, 15641064 - 15641130
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgt 193  Q
    |||||||| ||||||||||| |||||||| ||||||| |||||| | ||||||  |||||| |||||    
T  15641064 gattttcttaaattattagcagtgtcggcatgtcagtgtccgtgtcatgtccgatgtccgtgttcgt 15641130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 125 - 163
Target Start/End: Original strand, 40285686 - 40285724
Alignment:
Q  125 gcgattttctcaaattattagcggtgtcggcgtgtcagt 163  Q
    ||||||||||||||||||||||||||| || ||||||||    
T  40285686 gcgattttctcaaattattagcggtgttggtgtgtcagt 40285724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 180
Target Start/End: Original strand, 20157384 - 20157437
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccgg 180  Q
    |||||||||| ||||||||||||||||  ||||||||  ||||| |||||||||    
T  20157384 gattttctcacattattagcggtgtcgatgtgtcagtgcccgtgtcgtgtccgg 20157437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 160
Target Start/End: Complemental strand, 21530714 - 21530681
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgtc 160  Q
    |||||||||||||||||| |||||||||||||||    
T  21530714 gattttctcaaattattaacggtgtcggcgtgtc 21530681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 157
Target Start/End: Complemental strand, 25361960 - 25361881
Alignment:
Q  79 tgtccgacaccgacaccacaccgacacata--attataatgaaatatagcgattttctcaaattattagcggtgtcggcgt 157  Q
    |||||||||||||||| |||| ||||||||  |||| | |||| ||| | |||||||||||||||| || |||||||||||    
T  25361960 tgtccgacaccgacacgacactgacacatataattacactgaattat-gtgattttctcaaattatcagtggtgtcggcgt 25361881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 157
Target Start/End: Original strand, 41877505 - 41877534
Alignment:
Q  128 attttctcaaattattagcggtgtcggcgt 157  Q
    ||||||||||||||||||||||||||||||    
T  41877505 attttctcaaattattagcggtgtcggcgt 41877534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 79 - 160
Target Start/End: Complemental strand, 9828118 - 9828036
Alignment:
Q  79 tgtccgacaccgacaccacaccgacacataa--ttataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtc 160  Q
    |||| ||||| ||||| ||||||||||||||  ||| | |||| ||| | |||||| |||||||||||| ||||||||||||||    
T  9828118 tgtctgacacggacacgacaccgacacataaaattacactgaattat-gtgattttatcaaattattagtggtgtcggcgtgtc 9828036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 127 - 187
Target Start/End: Original strand, 10577769 - 10577829
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 187  Q
    |||||||| |||  |||||| ||||||||||||| || |||||| ||||||||| ||||||    
T  10577769 gattttctaaaaaaattagctgtgtcggcgtgtcggtgtccgtgtcgtgtccggtgtccgt 10577829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 134 - 170
Target Start/End: Original strand, 18556497 - 18556533
Alignment:
Q  134 tcaaattattagcggtgtcggcgtgtcagtatccgtg 170  Q
    ||||||||||||| |||||||||||||||| ||||||    
T  18556497 tcaaattattagctgtgtcggcgtgtcagtgtccgtg 18556533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 96 - 160
Target Start/End: Original strand, 25452152 - 25452215
Alignment:
Q  96 acaccgacacataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtc 160  Q
    ||||||||||||||||| | |||| ||| | |||||||||||||||||||| |||| ||| ||||    
T  25452152 acaccgacacataattacactgaattat-gagattttctcaaattattagcagtgttggcatgtc 25452215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 142 - 202
Target Start/End: Complemental strand, 34315722 - 34315663
Alignment:
Q  142 ttagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 202  Q
    ||||| |||||||| |||||||||||||| |||||||  | ||||||| ||||||||||||    
T  34315722 ttagctgtgtcggcatgtcagtatccgtgtcgtgtccata-tccgtatccgtgcttcatag 34315663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 5e-16; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 127 - 202
Target Start/End: Complemental strand, 8383282 - 8383207
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 202  Q
    ||||||||||||||||||||||||||||||||||| | |||||| ||||||| | |||||| | |||||| |||||    
T  8383282 gattttctcaaattattagcggtgtcggcgtgtcaatgtccgtgtcgtgtccagtgtccgtgtccgtgctacatag 8383207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 90 - 189
Target Start/End: Original strand, 5441029 - 5441128
Alignment:
Q  90 gacaccacaccgacacataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccgga-gtccgta 188  Q
    ||||| ||||||||||||||||  | |||| ||| | |||||||||||||| ||||||||| |||||||||||| || ||| |||||||||| |||||||    
T  5441029 gacacaacaccgacacataattccattgaattat-gtgattttctcaaatttttagcggtgacggcgtgtcagtgtctgtgtcgtgtccggatgtccgta 5441127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 77 - 166
Target Start/End: Original strand, 8039818 - 8039908
Alignment:
Q  77 catgtccgacaccgacaccacaccgacacata--attataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatc 166  Q
    |||||||||||||||||| |||||||||||||  |||| | |||| ||||   |||||||||||||||||||||||| ||||||||| ||||    
T  8039818 catgtccgacaccgacacgacaccgacacatataattacactgaattatata-attttctcaaattattagcggtgttggcgtgtcaatatc 8039908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 128 - 187
Target Start/End: Original strand, 24205076 - 24205135
Alignment:
Q  128 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 187  Q
    ||||||||||||||||| | |||||||||||||||| |||||| ||||||||| ||||||    
T  24205076 attttctcaaattattatccgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgt 24205135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 136 - 202
Target Start/End: Complemental strand, 8842346 - 8842280
Alignment:
Q  136 aaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 202  Q
    |||||||||||||||||||| ||||| | |||||| ||| ||||| |||||||| ||||||||||||    
T  8842346 aaattattagcggtgtcggcatgtcaatttccgtgtcgtatccggtgtccgtatccgtgcttcatag 8842280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 106 - 171
Target Start/End: Original strand, 5407261 - 5407325
Alignment:
Q  106 ataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgc 171  Q
    ||||||| |||||| ||| | |||||||||||||| ||||||||||||||||||| ||||||||||    
T  5407261 ataattacaatgaattat-gtgattttctcaaatttttagcggtgtcggcgtgtcggtatccgtgc 5407325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 127 - 187
Target Start/End: Complemental strand, 28918026 - 28917966
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 187  Q
    |||||| |||||||||||||  ||||||||||||||| |||||| ||||||||| ||||||    
T  28918026 gattttttcaaattattagctatgtcggcgtgtcagtttccgtgtcgtgtccggtgtccgt 28917966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 128 - 187
Target Start/End: Original strand, 4991002 - 4991061
Alignment:
Q  128 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 187  Q
    ||||||||||| ||||||||||||||| |||||||| |||||| ||||| ||| ||||||    
T  4991002 attttctcaaactattagcggtgtcggagtgtcagtctccgtgtcgtgttcggtgtccgt 4991061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 134 - 193
Target Start/End: Original strand, 10335327 - 10335386
Alignment:
Q  134 tcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgt 193  Q
    ||||||||||||  |||||||||||||||| |||||| ||||||||| |||||| |||||    
T  10335327 tcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtgttcgt 10335386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 79 - 202
Target Start/End: Complemental strand, 25064981 - 25064859
Alignment:
Q  79 tgtccgacaccgacaccacaccgacacataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtcc 178  Q
    ||||||||||| |||| | ||| ||||||||||| | | || ||| | |||||| |||||| ||||||||||||||||||||| | || ||| |||||||    
T  25064981 tgtccgacaccaacacgataccaacacataattacactaaattat-gtgattttttcaaatcattagcggtgtcggcgtgtcaatgtctgtgtcgtgtcc 25064883  T
Q  179 ggagtccgtattcgtgcttcatag 202  Q
    || ||| |||  |||| |||||||    
T  25064882 ggtgtctgtacccgtgtttcatag 25064859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 127 - 202
Target Start/End: Complemental strand, 55401100 - 55401025
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 202  Q
    |||||| ||||||||||||  |||||||||| ||||| |||||| ||| ||||| ||||||||  |||||||||||    
T  55401100 gattttttcaaattattagttgtgtcggcgtatcagtgtccgtgtcgtatccggtgtccgtatctgtgcttcatag 55401025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 127 - 201
Target Start/End: Original strand, 8587055 - 8587129
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcata 201  Q
    |||||| |||||||| |||  |||||||||||||||| |||||| | ||||||| ||||||||  ||||||||||    
T  8587055 gattttttcaaattactagatgtgtcggcgtgtcagtgtccgtgtcatgtccggtgtccgtatctgtgcttcata 8587129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 128 - 178
Target Start/End: Complemental strand, 9800064 - 9800014
Alignment:
Q  128 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtcc 178  Q
    |||||||||||||||||| ||||||||||||||||| | |||| |||||||    
T  9800064 attttctcaaattattagaggtgtcggcgtgtcagtgtacgtgtcgtgtcc 9800014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 127 - 201
Target Start/End: Original strand, 32429414 - 32429488
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcata 201  Q
    |||||||| |||||||||||| |||||| |||||| | | ||||  |||||||| |||||||| |||||||||||    
T  32429414 gattttcttaaattattagcgttgtcggagtgtcaatgttcgtgttgtgtccggtgtccgtatacgtgcttcata 32429488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 2620087 - 2620139
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccg 179  Q
    ||||||||||||| ||||| ||||||||||||||||| |||| | ||||||||    
T  2620087 gattttctcaaatgattagtggtgtcggcgtgtcagtgtccgagtcgtgtccg 2620139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 187
Target Start/End: Original strand, 15796328 - 15796388
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 187  Q
    |||||| ||||||||||| | |||||||||||||| | |||||| ||||||||| ||||||    
T  15796328 gattttttcaaattattaactgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgt 15796388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 26492239 - 26492291
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccg 179  Q
    |||||| |||||||||||||  ||||||||||||||| |||||| ||||||||    
T  26492239 gattttttcaaattattagctctgtcggcgtgtcagtgtccgtgtcgtgtccg 26492291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 131 - 170
Target Start/End: Complemental strand, 21720785 - 21720746
Alignment:
Q  131 ttctcaaattattagcggtgtcggcgtgtcagtatccgtg 170  Q
    |||||||||||||| |||||||||||||||||| ||||||    
T  21720785 ttctcaaattattatcggtgtcggcgtgtcagtgtccgtg 21720746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 45 - 83
Target Start/End: Original strand, 4466538 - 4466576
Alignment:
Q  45 aactatgaagcacggacactcctcgaattagccatgtcc 83  Q
    |||||||||||||||||||||||||||| |||| |||||    
T  4466538 aactatgaagcacggacactcctcgaataagccgtgtcc 4466576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 45 - 75
Target Start/End: Original strand, 5440965 - 5440995
Alignment:
Q  45 aactatgaagcacggacactcctcgaattag 75  Q
    |||||||||||||||||||||||||||||||    
T  5440965 aactatgaagcacggacactcctcgaattag 5440995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 127 - 177
Target Start/End: Original strand, 12674535 - 12674585
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtc 177  Q
    |||||||||||||||||||| ||||||| |||||| | |||||| ||||||    
T  12674535 gattttctcaaattattagcagtgtcggtgtgtcaatgtccgtgtcgtgtc 12674585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 45 - 83
Target Start/End: Complemental strand, 13807275 - 13807237
Alignment:
Q  45 aactatgaagcacggacactcctcgaattagccatgtcc 83  Q
    ||||||||| ||||||||||||||||||||| |||||||    
T  13807275 aactatgaaacacggacactcctcgaattaggcatgtcc 13807237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 129 - 203
Target Start/End: Original strand, 14223889 - 14223962
Alignment:
Q  129 ttttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatagt 203  Q
    |||||||||||||||| | ||||||||||||| || || ||| ||||||| | ||| || |||||||||||||||    
T  14223889 ttttctcaaattattatctgtgtcggcgtgtcggtgtctgtgtcgtgtcc-gtgtctgtgttcgtgcttcatagt 14223962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 170
Target Start/End: Original strand, 3865592 - 3865633
Alignment:
Q  129 ttttctcaaattattagcggtgtcggcgtgtcagtatccgtg 170  Q
    |||| ||||||||||||| |||||||||||||||| ||||||    
T  3865592 ttttttcaaattattagctgtgtcggcgtgtcagtgtccgtg 3865633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 170
Target Start/End: Complemental strand, 12704030 - 12703989
Alignment:
Q  129 ttttctcaaattattagcggtgtcggcgtgtcagtatccgtg 170  Q
    ||||||||||||||||| ||||||||||||||  ||||||||    
T  12704030 ttttctcaaattattagtggtgtcggcgtgtccatatccgtg 12703989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 159
Target Start/End: Original strand, 34307794 - 34307846
Alignment:
Q  106 ataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgt 159  Q
    ||||||| | |||||||| | |||||||||||||||||||||||||| ||||||    
T  34307794 ataattacactgaaatat-gtgattttctcaaattattagcggtgtcagcgtgt 34307846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 127 - 187
Target Start/End: Original strand, 3164059 - 3164119
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 187  Q
    |||||| ||||||||||||| |||||| |||| || | |||||| ||||||||| ||||||    
T  3164059 gattttttcaaattattagctgtgtcgacgtgccattgtccgtgtcgtgtccggtgtccgt 3164119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 127 - 163
Target Start/End: Original strand, 4987325 - 4987361
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgtcagt 163  Q
    |||||| ||||||||||||| ||||||||||||||||    
T  4987325 gattttttcaaattattagctgtgtcggcgtgtcagt 4987361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 127 - 163
Target Start/End: Original strand, 6525714 - 6525750
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgtcagt 163  Q
    ||||||||||||||||||||||||||| | |||||||    
T  6525714 gattttctcaaattattagcggtgtcgacatgtcagt 6525750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 134 - 170
Target Start/End: Original strand, 10318075 - 10318111
Alignment:
Q  134 tcaaattattagcggtgtcggcgtgtcagtatccgtg 170  Q
    ||||||||||||| |||||||||||||||| ||||||    
T  10318075 tcaaattattagctgtgtcggcgtgtcagtgtccgtg 10318111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 129 - 201
Target Start/End: Complemental strand, 14618804 - 14618732
Alignment:
Q  129 ttttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcata 201  Q
    |||||| |||||||||| |||||| |||| |||||  ||||| |||||| || |||||||  |||||||||||    
T  14618804 ttttcttaaattattaggggtgtcagcgtctcagtgcccgtgtcgtgtctggtgtccgtacccgtgcttcata 14618732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 127 - 171
Target Start/End: Complemental strand, 14832124 - 14832080
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgc 171  Q
    |||||| ||||||||||||| || |||||||||| ||||||||||    
T  14832124 gattttttcaaattattagctgtatcggcgtgtccgtatccgtgc 14832080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 127 - 163
Target Start/End: Complemental strand, 21479143 - 21479107
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgtcagt 163  Q
    |||||| ||||||||||||| ||||||||||||||||    
T  21479143 gattttttcaaattattagctgtgtcggcgtgtcagt 21479107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 128 - 160
Target Start/End: Complemental strand, 25074813 - 25074781
Alignment:
Q  128 attttctcaaattattagcggtgtcggcgtgtc 160  Q
    ||||||||||||||||| |||||||||||||||    
T  25074813 attttctcaaattattatcggtgtcggcgtgtc 25074781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 127 - 163
Target Start/End: Complemental strand, 26290396 - 26290360
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgtcagt 163  Q
    ||||||||||||||||||  |||||||||||||||||    
T  26290396 gattttctcaaattattaatggtgtcggcgtgtcagt 26290360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 26508135 - 26508083
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccg 179  Q
    |||||| ||||||||||||| ||||| ||||||||||||| ||  ||||||||    
T  26508135 gattttttcaaattattagctgtgtcagcgtgtcagtatctgtatcgtgtccg 26508083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 47 - 83
Target Start/End: Complemental strand, 27505370 - 27505334
Alignment:
Q  47 ctatgaagcacggacactcctcgaattagccatgtcc 83  Q
    ||||||||||||||||||||||| ||||| |||||||    
T  27505370 ctatgaagcacggacactcctcggattaggcatgtcc 27505334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 127 - 163
Target Start/End: Complemental strand, 40052357 - 40052321
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgtcagt 163  Q
    |||||| ||||||||||||| ||||||||||||||||    
T  40052357 gattttttcaaattattagctgtgtcggcgtgtcagt 40052321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 3)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 47 - 193
Target Start/End: Complemental strand, 21149 - 21002
Alignment:
Q  47 ctatgaagcacggacactcctcgaattagccatgtccgacaccgacaccacaccgacacata--attataatgaaatatagcgattttctcaaattatta 144  Q
    |||||||||||||| ||| |||| ||||| | |||| ||||||||||| | |||||||||||  ||||||  ||  ||| | ||||||||||||||||||    
T  21149 ctatgaagcacggatacttctcggattaggcgtgtctgacaccgacacgataccgacacatataattataccgacttat-gtgattttctcaaattatta 21051  T
Q  145 gcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgt 193  Q
     | ||||| || ||||||| |||||| |||||| || |||||| |||||    
T  21050 accgtgtcagcatgtcagtgtccgtgtcgtgtctggtgtccgtgttcgt 21002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 47 - 108
Target Start/End: Complemental strand, 21278 - 21217
Alignment:
Q  47 ctatgaagcacggacactcctcgaattagccatgtccgacaccgacaccacaccgacacata 108  Q
    |||||||||||||| |||||||| ||||| | |||| ||||||||||| | |||||||||||    
T  21278 ctatgaagcacggatactcctcggattaggcgtgtctgacaccgacacgataccgacacata 21217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 108
Target Start/End: Complemental strand, 21407 - 21346
Alignment:
Q  47 ctatgaagcacggacactcctcgaattagccatgtccgacaccgacaccacaccgacacata 108  Q
    ||||||||||| |||||| |||| ||||| | |||| ||||||||||| | |||||||||||    
T  21407 ctatgaagcacagacacttctcggattaggcgtgtctgacaccgacacgataccgacacata 21346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 127 - 187
Target Start/End: Complemental strand, 8823 - 8763
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 187  Q
    |||||| ||||||||||||| |||||||||||||||| |||||| ||||||||| ||||||    
T  8823 gattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgt 8763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 128 - 187
Target Start/End: Original strand, 225303 - 225362
Alignment:
Q  128 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 187  Q
    ||||||||||||||||| | |||||||||||||||| |||||| ||||||||| ||||||    
T  225303 attttctcaaattattatctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgt 225362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 79 - 187
Target Start/End: Complemental strand, 241668 - 241559
Alignment:
Q  79 tgtccgacaccgacaccacaccgacac--ataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgt 176  Q
    ||||||||||| |||| ||||||||||  ||||||| | | || ||| | ||||||  |||||||||||| |||||||||||||||| |||||| |||||    
T  241668 tgtccgacaccaacacgacaccgacactcataattacactaaattat-gtgatttttccaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgt 241570  T
Q  177 ccggagtccgt 187  Q
    |||| ||||||    
T  241569 ccggtgtccgt 241559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 128 - 169
Target Start/End: Complemental strand, 92831 - 92790
Alignment:
Q  128 attttctcaaattattagcggtgtcggcgtgtcagtatccgt 169  Q
    |||||||||||||||||||||||||||||||||||| |||||    
T  92831 attttctcaaattattagcggtgtcggcgtgtcagtgtccgt 92790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 77 - 162
Target Start/End: Complemental strand, 53256 - 53170
Alignment:
Q  77 catgtccgacaccgacaccacaccgacac--ataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcag 162  Q
    ||||||||||||||||||  |||||||||  ||||||| | |||| ||| | ||||||||||||||||| ||||| ||||||||||||    
T  53256 catgtccgacaccgacacggcaccgacacttataattacactgaattat-gtgattttctcaaattattggcggtatcggcgtgtcag 53170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 37; Significance: 0.000000000008; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 127 - 199
Target Start/End: Original strand, 178853 - 178925
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttca 199  Q
    |||||| ||||||||||||  |||||||||||||||| |||||| ||||||||| |||  ||| |||||||||    
T  178853 gattttttcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtcaatatccgtgcttca 178925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 128 - 169
Target Start/End: Original strand, 192284 - 192325
Alignment:
Q  128 attttctcaaattattagcggtgtcggcgtgtcagtatccgt 169  Q
    ||||||||||||||||| |||||||||||||||||| |||||    
T  192284 attttctcaaattattaacggtgtcggcgtgtcagtgtccgt 192325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 37; Significance: 0.000000000008; HSPs: 21)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 127 - 187
Target Start/End: Original strand, 23293020 - 23293080
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 187  Q
    |||||| ||||||||||||| |||||||||||||| | |||||| ||||||||| ||||||    
T  23293020 gattttttcaaattattagctgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgt 23293080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 128 - 163
Target Start/End: Original strand, 35723420 - 35723455
Alignment:
Q  128 attttctcaaattattagcggtgtcggcgtgtcagt 163  Q
    ||||||||||||||||||||||||||||||||||||    
T  35723420 attttctcaaattattagcggtgtcggcgtgtcagt 35723455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 129 - 163
Target Start/End: Original strand, 17345451 - 17345485
Alignment:
Q  129 ttttctcaaattattagcggtgtcggcgtgtcagt 163  Q
    |||||||||||||||||||||||||||||||||||    
T  17345451 ttttctcaaattattagcggtgtcggcgtgtcagt 17345485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 128 - 185
Target Start/End: Complemental strand, 847975 - 847918
Alignment:
Q  128 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtcc 185  Q
    |||||||||||||||||||||  ||||||||||||| || ||| ||||||||| ||||    
T  847975 attttctcaaattattagcggcatcggcgtgtcagtgtctgtgtcgtgtccggggtcc 847918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 127 - 180
Target Start/End: Complemental strand, 36635349 - 36635296
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccgg 180  Q
    ||||||||||||||||||| ||||| ||||||||||| |||| | |||||||||    
T  36635349 gattttctcaaattattagtggtgttggcgtgtcagtgtccgagtcgtgtccgg 36635296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 128 - 187
Target Start/End: Complemental strand, 24343531 - 24343472
Alignment:
Q  128 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 187  Q
    ||||||||||||||||| | ||||||||||||| |  |||||| ||||||||| ||||||    
T  24343531 attttctcaaattattatccgtgtcggcgtgtcggcgtccgtgtcgtgtccggtgtccgt 24343472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 79 - 185
Target Start/End: Original strand, 30982863 - 30982967
Alignment:
Q  79 tgtccgacaccgacaccacaccgacac--ataattataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgt 176  Q
    |||| ||||||||||| ||||||||||  ||||||| | |||||||| | ||||||||||||| |||||||||   |||||||| || |||||| ||| |    
T  30982863 tgtctgacaccgacacgacaccgacacttataattacactgaaatat-gtgattttctcaaatcattagcggt---ggcgtgtctgtgtccgtgtcgtat 30982958  T
Q  177 ccggagtcc 185  Q
    |||| ||||    
T  30982959 ccggtgtcc 30982967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 128 - 170
Target Start/End: Complemental strand, 7012090 - 7012048
Alignment:
Q  128 attttctcaaattattagcggtgtcggcgtgtcagtatccgtg 170  Q
    ||||||||||||||||| ||||||||||||||| || ||||||    
T  7012090 attttctcaaattattatcggtgtcggcgtgtcggtgtccgtg 7012048  T

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Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 127 - 208
Target Start/End: Complemental strand, 7670709 - 7670625
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcg---tgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatagtatatg 208  Q
    |||||||||||| |||||||  ||||||||   ||||||| |||| | |||||||||  ||| ||||||||||||||| ||||||    
T  7670709 gattttctcaaactattagcaatgtcggcgacgtgtcagtttccgcgtcgtgtccggtatccatattcgtgcttcatactatatg 7670625  T

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Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 127 - 177
Target Start/End: Original strand, 20521883 - 20521933
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtc 177  Q
    |||||| ||||||||||| |||| ||||||||||||| |||||| ||||||    
T  20521883 gattttatcaaattattatcggtatcggcgtgtcagtgtccgtgtcgtgtc 20521933  T

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Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 129 - 187
Target Start/End: Complemental strand, 20633508 - 20633450
Alignment:
Q  129 ttttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 187  Q
    |||| |||||||||||||||||||| ||||||||| |||||  |||||| || ||||||    
T  20633508 ttttttcaaattattagcggtgtcgacgtgtcagtgtccgtatcgtgtctggtgtccgt 20633450  T

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Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 170
Target Start/End: Complemental strand, 30299048 - 30298928
Alignment:
Q  47 ctatgaagcacggacactcctcgaattagccatgtccgacaccgacaccacaccgacacat--aattataatgaaatatagcgattttctcaaattatta 144  Q
    ||||||||||||||||||||||| ||||| | |||||     || ||| |||||||||| |  ||||| | |||| |||  |  |||| |||||||||||    
T  30299048 ctatgaagcacggacactcctcggattagacgtgtcc-----cggcacgacaccgacacttgtaattacactgaattatgtcatttttttcaaattatta 30298954  T
Q  145 gcggtgtcggcgtgtcagtatccgtg 170  Q
    || |||||||||||||||| ||||||    
T  30298953 gctgtgtcggcgtgtcagtgtccgtg 30298928  T

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Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 170
Target Start/End: Complemental strand, 30327916 - 30327796
Alignment:
Q  47 ctatgaagcacggacactcctcgaattagccatgtccgacaccgacaccacaccgacacat--aattataatgaaatatagcgattttctcaaattatta 144  Q
    ||||||||||||||||||||||| ||||| | |||||     || ||| |||||||||| |  ||||| | |||| |||  |  |||| |||||||||||    
T  30327916 ctatgaagcacggacactcctcggattagacgtgtcc-----cggcacgacaccgacacttgtaattacactgaattatgtcatttttttcaaattatta 30327822  T
Q  145 gcggtgtcggcgtgtcagtatccgtg 170  Q
    || |||||||||||||||| ||||||    
T  30327821 gctgtgtcggcgtgtcagtgtccgtg 30327796  T

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Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 127 - 161
Target Start/End: Complemental strand, 40613475 - 40613441
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgtca 161  Q
    |||||||||||| ||||||||||||||||||||||    
T  40613475 gattttctcaaaatattagcggtgtcggcgtgtca 40613441  T

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Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 198
Target Start/End: Complemental strand, 28084544 - 28084475
Alignment:
Q  129 ttttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttc 198  Q
    |||| ||||||| ||||| |||||||||||||||  || ||| ||||||||| ||||||||  |||||||    
T  28084544 ttttttcaaattcttagctgtgtcggcgtgtcagcgtctgtgtcgtgtccggtgtccgtatctgtgcttc 28084475  T

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Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 127 - 159
Target Start/End: Complemental strand, 1747237 - 1747205
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgt 159  Q
    ||||||||||| |||||||||||||||||||||    
T  1747237 gattttctcaatttattagcggtgtcggcgtgt 1747205  T

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Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 127 - 202
Target Start/End: Original strand, 5775392 - 5775469
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgtcagta---tccgtgccgtgtccggagtccgtattcgtgcttcatag 202  Q
    ||||||||||||||||||  |||||||  |||||||||   |||||| ||||||| | |||| ||||||||||||||||    
T  5775392 gattttctcaaattattaatggtgtcgt-gtgtcagtagtgtccgtgtcgtgtcctgtgtccatattcgtgcttcatag 5775469  T

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Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 127 - 170
Target Start/End: Complemental strand, 16184842 - 16184801
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtg 170  Q
    |||||||||||||||||||||  |||||||||||||| ||||||    
T  16184842 gattttctcaaattattagcg--gtcggcgtgtcagtgtccgtg 16184801  T

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Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 47 - 91
Target Start/End: Original strand, 18844423 - 18844467
Alignment:
Q  47 ctatgaagcacggacactcctcgaattagccatgtccgacaccga 91  Q
    |||||||||||||||||| |||| ||||| | |||||||||||||    
T  18844423 ctatgaagcacggacacttctcggattaggcgtgtccgacaccga 18844467  T

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Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 47 - 83
Target Start/End: Complemental strand, 28470484 - 28470448
Alignment:
Q  47 ctatgaagcacggacactcctcgaattagccatgtcc 83  Q
    ||||||||||||||||||||||| ||||| |||||||    
T  28470484 ctatgaagcacggacactcctcggattaggcatgtcc 28470448  T

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Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 134 - 202
Target Start/End: Complemental strand, 28720894 - 28720827
Alignment:
Q  134 tcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 202  Q
    ||||||||||||| |||||||| ||||||| | |||| ||||||| | ||| |||| ||||||||||||    
T  28720894 tcaaattattagctgtgtcggcatgtcagtgttcgtgtcgtgtcc-gtgtctgtatacgtgcttcatag 28720827  T

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Target: scaffold0652 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 187
Target Start/End: Original strand, 496 - 556
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 187  Q
    |||||| ||||||||||||| |||||||||| ||||| |||||| ||||| ||| ||||||    
T  496 gattttttcaaattattagcagtgtcggcgtatcagtgtccgtggcgtgttcggtgtccgt 556  T

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Target: scaffold0279 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0279
Description:

Target: scaffold0279; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 202
Target Start/End: Original strand, 17903 - 17979
Alignment:
Q  126 cgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgtattcgtgcttcatag 202  Q
    |||||||||||||||||||||||||| |||||||  || |  ||  ||||||| | |||||||| ||||||||||||    
T  17903 cgattttctcaaattattagcggtgtaggcgtgttggtgtttgtatcgtgtccagtgtccgtatccgtgcttcatag 17979  T

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Target: scaffold0475 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 128 - 187
Target Start/End: Complemental strand, 3340 - 3281
Alignment:
Q  128 attttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccggagtccgt 187  Q
    ||||||| ||||| |||||  ||||| |||||||||||||||| ||||||||| ||||||    
T  3340 attttctaaaattgttagcattgtcgacgtgtcagtatccgtgtcgtgtccggtgtccgt 3281  T

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Target: scaffold0103 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 127 - 170
Target Start/End: Complemental strand, 51836 - 51793
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtg 170  Q
    |||||| ||||||||||||| |||||||||||||||| ||||||    
T  51836 gattttttcaaattattagctgtgtcggcgtgtcagtgtccgtg 51793  T

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Target: scaffold0697 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0697
Description:

Target: scaffold0697; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 160
Target Start/End: Complemental strand, 1669 - 1636
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgtc 160  Q
    |||||||||||||||||| |||||||||||||||    
T  1669 gattttctcaaattattaacggtgtcggcgtgtc 1636  T

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Target: scaffold0110 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 172
Target Start/End: Complemental strand, 28913 - 28830
Alignment:
Q  90 gacaccacaccgacacata--attataatgaaatatagcgattttctcaaattattagcggtgtcggcgtgtcagtatccgtgcc 172  Q
    ||||| |||||||||||||  |||| | |||| ||| |||||||||| ||||||||| |||||||||||||| ||| | ||||||    
T  28913 gacacaacaccgacacatataattacattgaattat-gcgattttcttaaattattaacggtgtcggcgtgttagtgttcgtgcc 28830  T

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Target: scaffold0450 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 47 - 75
Target Start/End: Original strand, 8564 - 8592
Alignment:
Q  47 ctatgaagcacggacactcctcgaattag 75  Q
    |||||||||||||||||||||||||||||    
T  8564 ctatgaagcacggacactcctcgaattag 8592  T

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Target: scaffold0027 (Bit Score: 29; Significance: 0.0000005; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 46707 - 46655
Alignment:
Q  127 gattttctcaaattattagcggtgtcggcgtgtcagtatccgtgccgtgtccg 179  Q
    |||||| ||||||||||| | |||||||||||||| | |||||| ||||||||    
T  46707 gattttttcaaattattaactgtgtcggcgtgtcattgtccgtgtcgtgtccg 46655  T

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Target: scaffold0027; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 93
Target Start/End: Complemental strand, 46778 - 46731
Alignment:
Q  45 aactatgaagcacggacactcctcgaattagccatgtccgacaccgaca 93  Q
    ||||||||||||||||||||||||| ||||| | ||| |||||||||||    
T  46778 aactatgaagcacggacactcctcggattaggcgtgt-cgacaccgaca 46731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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