View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3410_high_33 (Length: 285)
Name: NF3410_high_33
Description: NF3410
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3410_high_33 |
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Alignment Details
Target: chr7 (Bit Score: 242; Significance: 1e-134; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 1 - 250
Target Start/End: Complemental strand, 47422050 - 47421801
Alignment:
| Q |
1 |
gatcccaagctcagctagcttactgcacacaacgattgacataattaaccaaatatcaatgaaacatttatataataattgtaattaccttgagacatga |
100 |
Q |
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| T |
47422050 |
gatcccaagctcagctagcttactgcacacaacaattgacataattaaccaaatatcaatgaaacatttatataataattgtaattaccttgagacatga |
47421951 |
T |
|
| Q |
101 |
tcccatgtgatgagttgatctgggaagaaattgtggatggtagatgtgatcttgaagagtacaagaagttcgtggttggtccagctagaatcgatgatca |
200 |
Q |
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| T |
47421950 |
tcccatgtgatgagttgatctgggaagaaattgtggatggtagatgtgatcttgaagagtacaagaagttcgtggttggtccagctagaatcgatgatca |
47421851 |
T |
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| Q |
201 |
acggtggtggaatttggatctggaagttgattgaatttgaattagaatta |
250 |
Q |
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| T |
47421850 |
acggtggtggaatttggatctggaagttgattgaattagaattagaatta |
47421801 |
T |
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