View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3410_low_18 (Length: 407)

Name: NF3410_low_18
Description: NF3410
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3410_low_18
NF3410_low_18
[»] chr5 (26 HSPs)
chr5 (18-377)||(43148277-43148636)
chr5 (345-399)||(10649327-10649381)
chr5 (346-399)||(27267012-27267065)
chr5 (345-387)||(4953956-4953998)
chr5 (345-399)||(7241656-7241710)
chr5 (345-399)||(7246832-7246886)
chr5 (345-399)||(30371598-30371652)
chr5 (346-399)||(781264-781317)
chr5 (345-393)||(27751788-27751837)
chr5 (345-398)||(28235459-28235512)
chr5 (347-399)||(21060433-21060485)
chr5 (345-393)||(34881584-34881632)
chr5 (345-399)||(18677618-18677672)
chr5 (345-383)||(19259978-19260016)
chr5 (347-393)||(33029726-33029772)
chr5 (345-399)||(36344641-36344695)
chr5 (345-390)||(42579751-42579796)
chr5 (345-393)||(7887095-7887143)
chr5 (346-393)||(3271565-3271612)
chr5 (349-399)||(7150487-7150537)
chr5 (345-399)||(16981164-16981218)
chr5 (345-399)||(19281096-19281150)
chr5 (349-399)||(26578127-26578177)
chr5 (345-381)||(11192241-11192277)
chr5 (345-393)||(28097027-28097075)
chr5 (345-393)||(35475494-35475542)
[»] chr8 (24 HSPs)
chr8 (345-399)||(9072595-9072649)
chr8 (345-399)||(9619510-9619564)
chr8 (345-399)||(11725560-11725614)
chr8 (345-399)||(42448180-42448234)
chr8 (345-393)||(4808842-4808890)
chr8 (345-399)||(11196770-11196824)
chr8 (345-399)||(44100084-44100138)
chr8 (345-390)||(11464050-11464095)
chr8 (347-399)||(2655749-2655801)
chr8 (345-393)||(9498760-9498807)
chr8 (345-400)||(19876090-19876145)
chr8 (348-399)||(29777110-29777161)
chr8 (345-399)||(28239711-28239765)
chr8 (345-391)||(33342315-33342361)
chr8 (345-399)||(33895959-33896013)
chr8 (345-399)||(43890277-43890331)
chr8 (345-399)||(44577914-44577968)
chr8 (345-398)||(15597320-15597373)
chr8 (346-399)||(17949126-17949179)
chr8 (345-390)||(34611682-34611727)
chr8 (345-393)||(27747270-27747318)
chr8 (352-399)||(14907076-14907123)
chr8 (346-399)||(35580337-35580390)
chr8 (359-399)||(16794185-16794225)
[»] chr7 (24 HSPs)
chr7 (345-399)||(23425523-23425577)
chr7 (345-399)||(46821885-46821939)
chr7 (345-399)||(22928022-22928076)
chr7 (345-399)||(26492236-26492290)
chr7 (346-399)||(2843379-2843432)
chr7 (345-393)||(26583585-26583633)
chr7 (345-399)||(21266263-21266317)
chr7 (345-398)||(23085391-23085445)
chr7 (345-391)||(42311151-42311197)
chr7 (346-400)||(48207775-48207828)
chr7 (343-399)||(433844-433900)
chr7 (346-393)||(42067218-42067265)
chr7 (345-399)||(1485408-1485462)
chr7 (345-399)||(35496327-35496381)
chr7 (345-399)||(35667383-35667437)
chr7 (345-399)||(46338924-46338978)
chr7 (345-398)||(17611002-17611055)
chr7 (345-398)||(20116454-20116507)
chr7 (352-399)||(31235944-31235991)
chr7 (345-380)||(32684556-32684591)
chr7 (345-399)||(6001892-6001946)
chr7 (345-399)||(45199183-45199237)
chr7 (345-377)||(1449003-1449035)
chr7 (345-381)||(12539125-12539161)
[»] chr6 (15 HSPs)
chr6 (345-399)||(12652811-12652865)
chr6 (345-399)||(17237436-17237490)
chr6 (345-393)||(10228550-10228598)
chr6 (345-399)||(8496836-8496890)
chr6 (345-399)||(25064106-25064160)
chr6 (345-391)||(23947477-23947523)
chr6 (345-399)||(33740730-33740784)
chr6 (345-390)||(4088330-4088375)
chr6 (345-393)||(4984735-4984783)
chr6 (352-399)||(4468437-4468484)
chr6 (345-399)||(7881255-7881309)
chr6 (345-399)||(34489119-34489173)
chr6 (343-399)||(16419027-16419083)
chr6 (345-399)||(7876197-7876251)
chr6 (352-393)||(12165719-12165760)
[»] chr4 (26 HSPs)
chr4 (347-393)||(43154178-43154224)
chr4 (345-399)||(9529030-9529084)
chr4 (345-399)||(34024588-34024642)
chr4 (345-399)||(47416767-47416821)
chr4 (345-394)||(25273758-25273807)
chr4 (345-399)||(868040-868094)
chr4 (345-399)||(10389905-10389959)
chr4 (346-399)||(20569136-20569189)
chr4 (346-399)||(31381823-31381876)
chr4 (345-393)||(1531789-1531837)
chr4 (343-399)||(5333683-5333738)
chr4 (345-393)||(6972692-6972740)
chr4 (345-393)||(9645707-9645755)
chr4 (347-399)||(50766661-50766713)
chr4 (347-399)||(56194484-56194536)
chr4 (345-391)||(9283794-9283840)
chr4 (345-399)||(10359698-10359752)
chr4 (345-399)||(35965127-35965181)
chr4 (345-399)||(38706862-38706916)
chr4 (345-386)||(44947286-44947327)
chr4 (345-393)||(12265338-12265386)
chr4 (348-399)||(37188744-37188795)
chr4 (345-399)||(2115740-2115794)
chr4 (345-399)||(43444276-43444330)
chr4 (353-391)||(53616811-53616849)
chr4 (345-389)||(50179654-50179698)
[»] chr3 (22 HSPs)
chr3 (345-399)||(44907551-44907605)
chr3 (345-399)||(3850607-3850661)
chr3 (346-399)||(14464377-14464430)
chr3 (346-391)||(49552383-49552428)
chr3 (345-399)||(4178433-4178487)
chr3 (345-399)||(25162305-25162359)
chr3 (349-399)||(36905994-36906044)
chr3 (349-393)||(6823555-6823599)
chr3 (345-393)||(46934511-46934559)
chr3 (345-399)||(22802890-22802944)
chr3 (345-399)||(29503331-29503385)
chr3 (345-391)||(32607337-32607382)
chr3 (349-399)||(50611569-50611619)
chr3 (345-399)||(51202401-51202455)
chr3 (345-393)||(12115962-12116010)
chr3 (347-399)||(38440729-38440781)
chr3 (347-399)||(46178447-46178499)
chr3 (348-399)||(39917548-39917599)
chr3 (345-399)||(4172435-4172489)
chr3 (345-399)||(25631679-25631733)
chr3 (345-399)||(38855189-38855242)
chr3 (345-382)||(25849689-25849726)
[»] chr2 (24 HSPs)
chr2 (346-399)||(45128080-45128133)
chr2 (347-399)||(21570560-21570612)
chr2 (345-392)||(2808629-2808676)
chr2 (345-399)||(8971780-8971834)
chr2 (345-399)||(36233880-36233934)
chr2 (346-399)||(27249303-27249356)
chr2 (345-393)||(25086909-25086957)
chr2 (38-165)||(44664678-44664805)
chr2 (345-391)||(459434-459480)
chr2 (345-399)||(6173507-6173561)
chr2 (349-399)||(27477034-27477084)
chr2 (345-399)||(30420552-30420606)
chr2 (345-389)||(9986509-9986553)
chr2 (349-399)||(7015862-7015912)
chr2 (345-387)||(32913117-32913159)
chr2 (345-399)||(40626179-40626233)
chr2 (345-398)||(3270381-3270434)
chr2 (346-399)||(40660081-40660134)
chr2 (361-393)||(42949605-42949637)
chr2 (348-399)||(4192717-4192768)
chr2 (345-399)||(3725056-3725110)
chr2 (345-399)||(32680734-32680788)
chr2 (345-391)||(41712925-41712971)
chr2 (349-390)||(4228011-4228052)
[»] scaffold0495 (1 HSPs)
scaffold0495 (345-393)||(5269-5317)
[»] chr1 (28 HSPs)
chr1 (345-399)||(51868797-51868851)
chr1 (345-399)||(51871739-51871793)
chr1 (345-390)||(9172363-9172408)
chr1 (345-390)||(9180345-9180390)
chr1 (346-399)||(25728111-25728164)
chr1 (345-390)||(33291580-33291625)
chr1 (346-399)||(50272292-50272345)
chr1 (345-399)||(25406436-25406490)
chr1 (345-390)||(7342597-7342642)
chr1 (346-390)||(19723209-19723253)
chr1 (341-393)||(27872610-27872662)
chr1 (353-399)||(5701140-5701186)
chr1 (345-399)||(20266177-20266231)
chr1 (345-399)||(30818497-30818551)
chr1 (345-399)||(45426214-45426268)
chr1 (345-398)||(40646563-40646616)
chr1 (347-399)||(14545397-14545449)
chr1 (347-399)||(19716049-19716100)
chr1 (347-399)||(28035016-28035068)
chr1 (352-399)||(5324709-5324756)
chr1 (345-399)||(7997662-7997716)
chr1 (345-399)||(18569462-18569516)
chr1 (345-399)||(30878950-30879004)
chr1 (345-399)||(35584773-35584827)
chr1 (349-399)||(40881165-40881215)
chr1 (346-399)||(48365903-48365956)
chr1 (345-398)||(50166252-50166305)
chr1 (345-393)||(44637297-44637344)
[»] scaffold0003 (1 HSPs)
scaffold0003 (345-399)||(361946-362000)
[»] scaffold0311 (1 HSPs)
scaffold0311 (345-393)||(8591-8639)
[»] scaffold0426 (1 HSPs)
scaffold0426 (346-393)||(6210-6257)
[»] scaffold0608 (1 HSPs)
scaffold0608 (345-389)||(113-157)
[»] scaffold0011 (1 HSPs)
scaffold0011 (346-386)||(11011-11051)


Alignment Details
Target: chr5 (Bit Score: 260; Significance: 1e-145; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 18 - 377
Target Start/End: Original strand, 43148277 - 43148636
Alignment:
Q  18 gtcttcagcaagggcaagacgagattcacctttgatgactttctcgaacttcaactttgccccaatttatttgttgaactcgataacagcaaaattagcg 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| |||||||||||||||||||||||||||||||    
T  43148277 gtcttcagcaagggcaagacgagattcacctttgatgactttctcgaactttaactttgccccagtttgtttgttgaactcgataacagcaaaattagcg 43148376  T
Q  118 atatcaatcacatgtgggttgttgatatctttgattcgactccaaccatccgacaaaggttgcttccttgcatctgcataagacatnnnnnnnnnnnnnn 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||                  
T  43148377 atatcaatcacatgtgggttgttgatatctttgattcgactccaaccatccgacaaaggttgcttccttgcatctgcataagacatcaaaacaacaaaaa 43148476  T
Q  218 nnnnnnnnnnttggagtttcatattgtattgtaaatgttatctttttaaagtttataattatagttgctgtggattagcctttagccggttaggttctta 317  Q
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  43148477 gaacaaacaattggagtttcatattgtattgtaaatgttatctttttaaagtttataattatagttgttgtggattagcctttagccggttaggttctta 43148576  T
Q  318 tatatgtgtcaaaattaatttactcttggggtggttttgggtcaattcttgacttgaaat 377  Q
    ||||||||||||||||||||||||||| | ||||||||||||||||||||||||| ||||    
T  43148577 tatatgtgtcaaaattaatttactcttagtgtggttttgggtcaattcttgacttaaaat 43148636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 345 - 399
Target Start/End: Original strand, 10649327 - 10649381
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctcttcatcttcttctc 399  Q
    |||||| ||||||||||||||||||| |||||||||||||||||||||| |||||    
T  10649327 ggggtgattttgggtcaattcttgacctgaaatcacccctcttcatctttttctc 10649381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 346 - 399
Target Start/End: Complemental strand, 27267065 - 27267012
Alignment:
Q  346 gggtggttttgggtcaattcttgacttgaaatcacccctcttcatcttcttctc 399  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| || |||||    
T  27267065 gggtggttttgggtcaattcttgacctgaaatcacccctcttcatatttttctc 27267012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 345 - 387
Target Start/End: Original strand, 4953956 - 4953998
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctctt 387  Q
    ||||||||||||||||||||||||||||| |||||||||||||    
T  4953956 ggggtggttttgggtcaattcttgacttggaatcacccctctt 4953998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 345 - 399
Target Start/End: Original strand, 7241656 - 7241710
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctcttcatcttcttctc 399  Q
    ||||||||||||||||||||||| || ||||| |||||||||||||||| |||||    
T  7241656 ggggtggttttgggtcaattcttaacctgaaaccacccctcttcatctttttctc 7241710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 345 - 399
Target Start/End: Original strand, 7246832 - 7246886
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctcttcatcttcttctc 399  Q
    ||||||||||||||||||||||| || ||||| |||||||||||||||| |||||    
T  7246832 ggggtggttttgggtcaattcttaacctgaaaccacccctcttcatctttttctc 7246886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 345 - 399
Target Start/End: Original strand, 30371598 - 30371652
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctcttcatcttcttctc 399  Q
    |||||||||||||||||||  ||||| |||||||||||||||||||||| |||||    
T  30371598 ggggtggttttgggtcaatatttgacctgaaatcacccctcttcatctttttctc 30371652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 346 - 399
Target Start/End: Original strand, 781264 - 781317
Alignment:
Q  346 gggtggttttgggtcaattcttgacttgaaatcacccctcttcatcttcttctc 399  Q
    |||||||||||| |||||||||||| ||||||||||| |||||||||| |||||    
T  781264 gggtggttttggttcaattcttgacctgaaatcacccatcttcatctttttctc 781317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 345 - 393
Target Start/End: Original strand, 27751788 - 27751837
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacc-cctcttcatctt 393  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||||||    
T  27751788 ggggtggttttgggtcaattcttgacctgaaatcacctcctcttcatctt 27751837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 345 - 398
Target Start/End: Original strand, 28235459 - 28235512
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctcttcatcttcttct 398  Q
    |||||||||||||||||||  ||||| |||||||||||||||||||||| ||||    
T  28235459 ggggtggttttgggtcaatcattgacctgaaatcacccctcttcatctttttct 28235512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 347 - 399
Target Start/End: Complemental strand, 21060485 - 21060433
Alignment:
Q  347 ggtggttttgggtcaattcttgacttgaaatcacccctcttcatcttcttctc 399  Q
    |||||||||||||||||||||||  |||||||||| ||||||||||| |||||    
T  21060485 ggtggttttgggtcaattcttgatctgaaatcaccactcttcatctttttctc 21060433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 345 - 393
Target Start/End: Original strand, 34881584 - 34881632
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctcttcatctt 393  Q
    ||||||||| |||||||||||||||| |||||||||| |||||||||||    
T  34881584 ggggtggttctgggtcaattcttgacctgaaatcacctctcttcatctt 34881632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 345 - 399
Target Start/End: Complemental strand, 18677672 - 18677618
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctcttcatcttcttctc 399  Q
    |||||||||||||||||||| ||||  |||||||| ||||||||||||| |||||    
T  18677672 ggggtggttttgggtcaattattgatctgaaatcatccctcttcatctttttctc 18677618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 345 - 383
Target Start/End: Complemental strand, 19260016 - 19259978
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccc 383  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  19260016 ggggtggttttgggtcaattcttgacctgaaatcacccc 19259978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 347 - 393
Target Start/End: Original strand, 33029726 - 33029772
Alignment:
Q  347 ggtggttttgggtcaattcttgacttgaaatcacccctcttcatctt 393  Q
    |||||||||||||||||| |||||| |||||||||| ||||||||||    
T  33029726 ggtggttttgggtcaatttttgactcgaaatcacccgtcttcatctt 33029772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 345 - 399
Target Start/End: Complemental strand, 36344695 - 36344641
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctcttcatcttcttctc 399  Q
    |||||||||||| ||| ||||||||| | |||||||||||||||||||| |||||    
T  36344695 ggggtggttttgagtcgattcttgacctaaaatcacccctcttcatctttttctc 36344641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 345 - 390
Target Start/End: Original strand, 42579751 - 42579796
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctcttcat 390  Q
    |||||||||||||||||||| ||||| ||||||||||||| |||||    
T  42579751 ggggtggttttgggtcaattattgacatgaaatcaccccttttcat 42579796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 345 - 393
Target Start/End: Complemental strand, 7887143 - 7887095
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctcttcatctt 393  Q
    |||||||||||||||| ||||||||| |||||||| |||||||| ||||    
T  7887143 ggggtggttttgggtccattcttgacctgaaatcatccctcttcgtctt 7887095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 346 - 393
Target Start/End: Complemental strand, 3271612 - 3271565
Alignment:
Q  346 gggtggttttgggtcaattcttgacttgaaatcacccctcttcatctt 393  Q
    ||||| |||| |||||||||||||| ||||||||| ||||||||||||    
T  3271612 gggtgattttaggtcaattcttgacatgaaatcactcctcttcatctt 3271565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 349 - 399
Target Start/End: Complemental strand, 7150537 - 7150487
Alignment:
Q  349 tggttttgggtcaattcttgacttgaaatcacccctcttcatcttcttctc 399  Q
    ||||||||| | |||| ||||| |||||||||||||||||||||| |||||    
T  7150537 tggttttggattaatttttgacctgaaatcacccctcttcatctttttctc 7150487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 345 - 399
Target Start/End: Original strand, 16981164 - 16981218
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctcttcatcttcttctc 399  Q
    |||||||| |||| |||||||||||| ||||||||| ||||||||| || |||||    
T  16981164 ggggtggtattggatcaattcttgacctgaaatcactcctcttcatatttttctc 16981218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 345 - 399
Target Start/End: Complemental strand, 19281150 - 19281096
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctcttcatcttcttctc 399  Q
    ||||||||||||||| |||| |||||  |||||||||| |||||||||| |||||    
T  19281150 ggggtggttttgggtaaatttttgaccggaaatcacccatcttcatctttttctc 19281096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 349 - 399
Target Start/End: Original strand, 26578127 - 26578177
Alignment:
Q  349 tggttttgggtcaattcttgacttgaaatcacccctcttcatcttcttctc 399  Q
    ||||||| |||||||||||||| ||||||||| | |||||||||| |||||    
T  26578127 tggtttttggtcaattcttgacctgaaatcactcatcttcatctttttctc 26578177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 345 - 381
Target Start/End: Original strand, 11192241 - 11192277
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacc 381  Q
    |||||||||||||||||||| ||||| ||||||||||    
T  11192241 ggggtggttttgggtcaatttttgacctgaaatcacc 11192277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 345 - 393
Target Start/End: Original strand, 28097027 - 28097075
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctcttcatctt 393  Q
    |||||||||||| ||||||| ||||| |||| |||||| ||||||||||    
T  28097027 ggggtggttttgtgtcaatttttgacctgaattcacccatcttcatctt 28097075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 345 - 393
Target Start/End: Complemental strand, 35475542 - 35475494
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctcttcatctt 393  Q
    |||||| |||||||| |||||||||  |||||||||| |||||||||||    
T  35475542 ggggtgattttgggttaattcttgatctgaaatcacctctcttcatctt 35475494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 47; Significance: 1e-17; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 345 - 399
Target Start/End: Original strand, 9072595 - 9072649
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctcttcatcttcttctc 399  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||| |||||    
T  9072595 ggggtggttttgggtcaatttttgacttgaaatcacccctcttcatctttttctc 9072649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 345 - 399
Target Start/End: Complemental strand, 9619564 - 9619510
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctcttcatcttcttctc 399  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  9619564 ggggtggttttgggtcaattcttgacctgaaatcacccctcttcatctttttctc 9619510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 345 - 399
Target Start/End: Original strand, 11725560 - 11725614
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctcttcatcttcttctc 399  Q
    |||||||||||||||||||||||||| ||||||||||||||||| |||| |||||    
T  11725560 ggggtggttttgggtcaattcttgacctgaaatcacccctcttcgtctttttctc 11725614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 345 - 399
Target Start/End: Complemental strand, 42448234 - 42448180
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctcttcatcttcttctc 399  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||||| |||||    
T  42448234 ggggtggttttgggttaattcttgacctgaaatcacccctcttcatctttttctc 42448180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 345 - 393
Target Start/End: Original strand, 4808842 - 4808890
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctcttcatctt 393  Q
    |||||||||||||||||||||||||| |||||| |||||||||||||||    
T  4808842 ggggtggttttgggtcaattcttgacctgaaattacccctcttcatctt 4808890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 345 - 399
Target Start/End: Original strand, 11196770 - 11196824
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctcttcatcttcttctc 399  Q
    |||||||||||||||||||||||||| |||||||| || |||||||||| |||||    
T  11196770 ggggtggttttgggtcaattcttgacctgaaatcatccatcttcatctttttctc 11196824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 345 - 399
Target Start/End: Complemental strand, 44100138 - 44100084
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctcttcatcttcttctc 399  Q
    |||||||||||||||| ||||||||| | |||||||||||||||||||| |||||    
T  44100138 ggggtggttttgggtcgattcttgacctaaaatcacccctcttcatctttttctc 44100084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 345 - 390
Target Start/End: Original strand, 11464050 - 11464095
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctcttcat 390  Q
    ||||||||||| |||||||||||||| |||||||||||||||||||    
T  11464050 ggggtggttttaggtcaattcttgacctgaaatcacccctcttcat 11464095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 347 - 399
Target Start/End: Original strand, 2655749 - 2655801
Alignment:
Q  347 ggtggttttgggtcaattcttgacttgaaatcacccctcttcatcttcttctc 399  Q
    |||||||||||||||||||||||| || |||||||| |||||||||| |||||    
T  2655749 ggtggttttgggtcaattcttgacctgcaatcacccatcttcatctttttctc 2655801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 345 - 393
Target Start/End: Complemental strand, 9498807 - 9498760
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctcttcatctt 393  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||||    
T  9498807 ggggtggttttgggtcaattctt-acctgaaatcacccctcttcatctt 9498760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 345 - 400
Target Start/End: Original strand, 19876090 - 19876145
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctcttcatcttcttctca 400  Q
    |||||||||||||||||||||||||| |||||| || | |||||||||| ||||||    
T  19876090 ggggtggttttgggtcaattcttgacctgaaattactcatcttcatctttttctca 19876145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 348 - 399
Target Start/End: Original strand, 29777110 - 29777161
Alignment:
Q  348 gtggttttgggtcaattcttgacttgaaatcacccctcttcatcttcttctc 399  Q
    ||||||||||||||||| ||||| ||||||||| |||||||||||| |||||    
T  29777110 gtggttttgggtcaattattgacatgaaatcactcctcttcatctttttctc 29777161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 345 - 399
Target Start/End: Original strand, 28239711 - 28239765
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctcttcatcttcttctc 399  Q
    |||||| ||||||||||||| ||||| |||||||||| ||||||||||| |||||    
T  28239711 ggggtgattttgggtcaatttttgacctgaaatcacctctcttcatctttttctc 28239765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 345 - 391
Target Start/End: Original strand, 33342315 - 33342361
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctcttcatc 391  Q
    |||||||||||||||||||| || || ||||||||||||||||||||    
T  33342315 ggggtggttttgggtcaatttttaacctgaaatcacccctcttcatc 33342361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 345 - 399
Target Start/End: Original strand, 33895959 - 33896013
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctcttcatcttcttctc 399  Q
    |||||||||||||||||||||||||  | || ||||||||||||||||| |||||    
T  33895959 ggggtggttttgggtcaattcttgatctaaagtcacccctcttcatctttttctc 33896013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 345 - 399
Target Start/End: Complemental strand, 43890331 - 43890277
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctcttcatcttcttctc 399  Q
    ||||||||||||| ||| || ||||| |||||||||||||||||||||| |||||    
T  43890331 ggggtggttttggatcattttttgacctgaaatcacccctcttcatctttttctc 43890277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 345 - 399
Target Start/End: Original strand, 44577914 - 44577968
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctcttcatcttcttctc 399  Q
    |||||||||||||||||||| ||||| | ||||||| |||||||||||| |||||    
T  44577914 ggggtggttttgggtcaatttttgacctaaaatcactcctcttcatctttttctc 44577968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 345 - 398
Target Start/End: Complemental strand, 15597373 - 15597320
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctcttcatcttcttct 398  Q
    |||||||||||  ||||||| ||||| |||||||||||||||||||||| ||||    
T  15597373 ggggtggttttcagtcaatttttgacctgaaatcacccctcttcatctttttct 15597320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 346 - 399
Target Start/End: Original strand, 17949126 - 17949179
Alignment:
Q  346 gggtggttttgggtcaattcttgacttgaaatcacccctcttcatcttcttctc 399  Q
    ||||| ||||||||||||| ||||| |||||||||||||||||| ||| |||||    
T  17949126 gggtgattttgggtcaattattgacctgaaatcacccctcttcacctttttctc 17949179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 345 - 390
Target Start/End: Original strand, 34611682 - 34611727
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctcttcat 390  Q
    |||||||||||||||||||||||||| ||||||||| | |||||||    
T  34611682 ggggtggttttgggtcaattcttgacctgaaatcactcatcttcat 34611727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 345 - 393
Target Start/End: Complemental strand, 27747318 - 27747270
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctcttcatctt 393  Q
    ||||| |||||||||||||| ||||||||||||||||  ||||||||||    
T  27747318 ggggtagttttgggtcaatttttgacttgaaatcaccattcttcatctt 27747270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 352 - 399
Target Start/End: Complemental strand, 14907123 - 14907076
Alignment:
Q  352 ttttgggtcaattcttgacttgaaatcacccctcttcatcttcttctc 399  Q
    |||||| |||||||||||| ||||||||||| |||||||||| |||||    
T  14907123 ttttggatcaattcttgacctgaaatcacccatcttcatctttttctc 14907076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 346 - 399
Target Start/End: Original strand, 35580337 - 35580390
Alignment:
Q  346 gggtggttttgggtcaattcttgacttgaaatcacccctcttcatcttcttctc 399  Q
    ||||||||||||||||||| ||||| | ||||||| | |||||||||| |||||    
T  35580337 gggtggttttgggtcaatttttgacataaaatcactcatcttcatctttttctc 35580390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 359 - 399
Target Start/End: Original strand, 16794185 - 16794225
Alignment:
Q  359 tcaattcttgacttgaaatcacccctcttcatcttcttctc 399  Q
    |||||| ||||||||||||||||| |||||||||| |||||    
T  16794185 tcaatttttgacttgaaatcacccatcttcatctttttctc 16794225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 47; Significance: 1e-17; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 345 - 399
Target Start/End: Complemental strand, 23425577 - 23425523
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctcttcatcttcttctc 399  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  23425577 ggggtggttttgggtcaattcttgacctgaaatcacccctcttcatctttttctc 23425523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 345 - 399
Target Start/End: Original strand, 46821885 - 46821939
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctcttcatcttcttctc 399  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  46821885 ggggtggttttgggtcaattcttgacctgaaatcacccctcttcatctttttctc 46821939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 345 - 399
Target Start/End: Complemental strand, 22928076 - 22928022
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctcttcatcttcttctc 399  Q
    |||||||||||||||||||||||||| ||||||||||||| |||||||| |||||    
T  22928076 ggggtggttttgggtcaattcttgacctgaaatcaccccttttcatctttttctc 22928022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 345 - 399
Target Start/End: Original strand, 26492236 - 26492290
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctcttcatcttcttctc 399  Q
    |||||||||||||||||||||||||| |||||| ||||||||||||||| |||||    
T  26492236 ggggtggttttgggtcaattcttgacctgaaataacccctcttcatctttttctc 26492290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 346 - 399
Target Start/End: Complemental strand, 2843432 - 2843379
Alignment:
Q  346 gggtggttttgggtcaattcttgacttgaaatcacccctcttcatcttcttctc 399  Q
    ||||||||||||||||||||||||| ||||| |||||||||||||||| |||||    
T  2843432 gggtggttttgggtcaattcttgacctgaaaacacccctcttcatctttttctc 2843379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 345 - 393
Target Start/End: Original strand, 26583585 - 26583633
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctcttcatctt 393  Q
    ||||||||||| |||||||||||||| ||||||||||||||||||||||    
T  26583585 ggggtggtttttggtcaattcttgacctgaaatcacccctcttcatctt 26583633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 345 - 399
Target Start/End: Original strand, 21266263 - 21266317
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctcttcatcttcttctc 399  Q
    |||||||||||||||||||| ||||| |||||||||| ||||||||||| |||||    
T  21266263 ggggtggttttgggtcaattattgacatgaaatcacctctcttcatctttttctc 21266317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 345 - 398
Target Start/End: Original strand, 23085391 - 23085445
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatca-cccctcttcatcttcttct 398  Q
    |||||||||||||||||||| |||||||||||||| |||||||||||||| ||||    
T  23085391 ggggtggttttgggtcaattattgacttgaaatcaccccctcttcatctttttct 23085445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 345 - 391
Target Start/End: Original strand, 42311151 - 42311197
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctcttcatc 391  Q
    |||||||||||||||||||||||||| |||||||| |||||||||||    
T  42311151 ggggtggttttgggtcaattcttgacctgaaatcatccctcttcatc 42311197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 346 - 400
Target Start/End: Original strand, 48207775 - 48207828
Alignment:
Q  346 gggtggttttgggtcaattcttgacttgaaatcacccctcttcatcttcttctca 400  Q
    |||||||||||||||| |||||||| |||||||||||||||||||||| ||||||    
T  48207775 gggtggttttgggtca-ttcttgacctgaaatcacccctcttcatctttttctca 48207828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 343 - 399
Target Start/End: Complemental strand, 433900 - 433844
Alignment:
Q  343 ttggggtggttttgggtcaattcttgacttgaaatcacccctcttcatcttcttctc 399  Q
    |||||||||||||||||||||| ||||| |||||||| |||| |||||||| |||||    
T  433900 ttggggtggttttgggtcaatttttgacctgaaatcatcccttttcatctttttctc 433844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 346 - 393
Target Start/End: Complemental strand, 42067265 - 42067218
Alignment:
Q  346 gggtggttttgggtcaattcttgacttgaaatcacccctcttcatctt 393  Q
    ||||| ||||||||||||||||||| |||||||||| |||||||||||    
T  42067265 gggtgattttgggtcaattcttgacctgaaatcacctctcttcatctt 42067218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 345 - 399
Target Start/End: Complemental strand, 1485462 - 1485408
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctcttcatcttcttctc 399  Q
    ||||||||||||||| |||||||||| | ||||||||| |||||||||| |||||    
T  1485462 ggggtggttttgggttaattcttgacctaaaatcacccgtcttcatctttttctc 1485408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 345 - 399
Target Start/End: Complemental strand, 35496381 - 35496327
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctcttcatcttcttctc 399  Q
    |||||||||||||||||||||||||| | ||||||||  |||||||||| |||||    
T  35496381 ggggtggttttgggtcaattcttgacctaaaatcaccaatcttcatctttttctc 35496327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 345 - 399
Target Start/End: Complemental strand, 35667437 - 35667383
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctcttcatcttcttctc 399  Q
    ||||||||||||| |||||||||||||| ||||||||| ||||||| || |||||    
T  35667437 ggggtggttttggatcaattcttgacttaaaatcacccttcttcatatttttctc 35667383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 345 - 399
Target Start/End: Original strand, 46338924 - 46338978
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctcttcatcttcttctc 399  Q
    ||||| |||||||||||||||||||| |||||| | ||||||||||||| |||||    
T  46338924 ggggtagttttgggtcaattcttgacctgaaattatccctcttcatctttttctc 46338978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 345 - 398
Target Start/End: Original strand, 17611002 - 17611055
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctcttcatcttcttct 398  Q
    ||||||||||| ||||||||  |||| |||||||||||||||||||||| ||||    
T  17611002 ggggtggttttaggtcaatttatgacctgaaatcacccctcttcatctttttct 17611055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 345 - 398
Target Start/End: Original strand, 20116454 - 20116507
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctcttcatcttcttct 398  Q
    ||||| |||||||||||||| ||||| ||||||||||| |||||||||| ||||    
T  20116454 ggggtagttttgggtcaatttttgacctgaaatcacccttcttcatctttttct 20116507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 352 - 399
Target Start/End: Complemental strand, 31235991 - 31235944
Alignment:
Q  352 ttttgggtcaattcttgacttgaaatcacccctcttcatcttcttctc 399  Q
    ||||||||||||| ||||| ||||||| |||||||||||||| |||||    
T  31235991 ttttgggtcaatttttgacatgaaatctcccctcttcatctttttctc 31235944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 345 - 380
Target Start/End: Original strand, 32684556 - 32684591
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcac 380  Q
    |||||||||||||||||||||||||| |||||||||    
T  32684556 ggggtggttttgggtcaattcttgacctgaaatcac 32684591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 345 - 399
Target Start/End: Original strand, 6001892 - 6001946
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctcttcatcttcttctc 399  Q
    |||||| |||||| |||||| ||||| ||||||||||| |||||||||| |||||    
T  6001892 ggggtgattttggatcaatttttgacctgaaatcacccatcttcatctttttctc 6001946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 345 - 399
Target Start/End: Complemental strand, 45199237 - 45199183
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctcttcatcttcttctc 399  Q
    ||||||||||||| |||| | ||||| ||||||||||| |||||||||| |||||    
T  45199237 ggggtggttttggatcaactattgacctgaaatcacccatcttcatctttttctc 45199183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 345 - 377
Target Start/End: Complemental strand, 1449035 - 1449003
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaat 377  Q
    |||||||||||||||||||||||||| ||||||    
T  1449035 ggggtggttttgggtcaattcttgacctgaaat 1449003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 345 - 381
Target Start/End: Complemental strand, 12539161 - 12539125
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacc 381  Q
    ||||||||||| |||||||||||||| ||||||||||    
T  12539161 ggggtggtttttggtcaattcttgacctgaaatcacc 12539125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 1e-17; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 345 - 399
Target Start/End: Original strand, 12652811 - 12652865
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctcttcatcttcttctc 399  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  12652811 ggggtggttttgggtcaattcttgacctgaaatcacccctcttcatctttttctc 12652865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 345 - 399
Target Start/End: Complemental strand, 17237490 - 17237436
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctcttcatcttcttctc 399  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  17237490 ggggtggttttgggtcaattcttgacatgaaatcacccctcttcatctttttctc 17237436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 345 - 393
Target Start/End: Original strand, 10228550 - 10228598
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctcttcatctt 393  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  10228550 ggggtggttttgggtcaattcttgacctgaaatcacccctcttcatctt 10228598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 345 - 399
Target Start/End: Original strand, 8496836 - 8496890
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctcttcatcttcttctc 399  Q
    |||||||||||| ||||||||||||| |||||||||||||||||||||| |||||    
T  8496836 ggggtggttttgagtcaattcttgacctgaaatcacccctcttcatctttttctc 8496890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 345 - 399
Target Start/End: Original strand, 25064106 - 25064160
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctcttcatcttcttctc 399  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||||| |||||    
T  25064106 ggggtggttttgggtcaattcttgacctgaaatcacctctcttcatctttttctc 25064160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 345 - 391
Target Start/End: Complemental strand, 23947523 - 23947477
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctcttcatc 391  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||||    
T  23947523 ggggtggttttgggtcaattcttgacctgaaatcacccatcttcatc 23947477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 345 - 399
Target Start/End: Complemental strand, 33740784 - 33740730
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctcttcatcttcttctc 399  Q
    ||||||||||| |||||||||||||| | |||||||||||||||||||| |||||    
T  33740784 ggggtggtttttggtcaattcttgacctaaaatcacccctcttcatctttttctc 33740730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 345 - 390
Target Start/End: Original strand, 4088330 - 4088375
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctcttcat 390  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||    
T  4088330 ggggtggttttgggtcaattcttgacctgaaatcacccatcttcat 4088375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 345 - 393
Target Start/End: Complemental strand, 4984783 - 4984735
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctcttcatctt 393  Q
    |||||||||||||||||||||||||| ||||||||| | ||||||||||    
T  4984783 ggggtggttttgggtcaattcttgacctgaaatcactcatcttcatctt 4984735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 352 - 399
Target Start/End: Original strand, 4468437 - 4468484
Alignment:
Q  352 ttttgggtcaattcttgacttgaaatcacccctcttcatcttcttctc 399  Q
    ||||||||||||||||||| |||| ||||||||||||||||| |||||    
T  4468437 ttttgggtcaattcttgacatgaagtcacccctcttcatcttgttctc 4468484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 345 - 399
Target Start/End: Complemental strand, 7881309 - 7881255
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctcttcatcttcttctc 399  Q
    ||||||||||||| |||||| ||||||||||||||||  |||||||||| |||||    
T  7881309 ggggtggttttggatcaattattgacttgaaatcacctttcttcatctttttctc 7881255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 345 - 399
Target Start/End: Original strand, 34489119 - 34489173
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctcttcatcttcttctc 399  Q
    ||||||||||| | |||||| ||||||| |||||||||||||||||||| |||||    
T  34489119 ggggtggtttttgatcaatttttgacttaaaatcacccctcttcatctttttctc 34489173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 343 - 399
Target Start/End: Original strand, 16419027 - 16419083
Alignment:
Q  343 ttggggtggttttgggtcaattcttgacttgaaatcacccctcttcatcttcttctc 399  Q
    |||||||||||||| |||||||||| || | ||||||||| |||||||||| |||||    
T  16419027 ttggggtggttttgagtcaattcttaacctaaaatcacccatcttcatctttttctc 16419083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 345 - 399
Target Start/End: Complemental strand, 7876251 - 7876197
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctcttcatcttcttctc 399  Q
    ||||||||||||| |||||| ||||| | ||||||||| |||||||||| |||||    
T  7876251 ggggtggttttggatcaattattgacctaaaatcacccatcttcatctttttctc 7876197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 352 - 393
Target Start/End: Original strand, 12165719 - 12165760
Alignment:
Q  352 ttttgggtcaattcttgacttgaaatcacccctcttcatctt 393  Q
    ||||||||||||| ||||| ||||||||| ||||||||||||    
T  12165719 ttttgggtcaattattgacctgaaatcactcctcttcatctt 12165760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 47; Significance: 1e-17; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 347 - 393
Target Start/End: Complemental strand, 43154224 - 43154178
Alignment:
Q  347 ggtggttttgggtcaattcttgacttgaaatcacccctcttcatctt 393  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  43154224 ggtggttttgggtcaattcttgacttgaaatcacccctcttcatctt 43154178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 345 - 399
Target Start/End: Complemental strand, 9529084 - 9529030
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctcttcatcttcttctc 399  Q
    |||||||||||||||||||||||||| |||||||||||||||| ||||| |||||    
T  9529084 ggggtggttttgggtcaattcttgacctgaaatcacccctctttatctttttctc 9529030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 345 - 399
Target Start/End: Complemental strand, 34024642 - 34024588
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctcttcatcttcttctc 399  Q
    ||||||||||||| |||||||||||| |||||||||||||||||||||| |||||    
T  34024642 ggggtggttttggatcaattcttgacctgaaatcacccctcttcatctttttctc 34024588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 345 - 399
Target Start/End: Original strand, 47416767 - 47416821
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctcttcatcttcttctc 399  Q
    |||||| ||||||||||||| |||||||||||||||||||||||||||| |||||    
T  47416767 ggggtgattttgggtcaattattgacttgaaatcacccctcttcatctttttctc 47416821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 345 - 394
Target Start/End: Original strand, 25273758 - 25273807
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctcttcatcttc 394  Q
    ||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  25273758 ggggtggttttggatcaattcttgacctgaaatcacccctcttcatcttc 25273807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 345 - 399
Target Start/End: Original strand, 868040 - 868094
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctcttcatcttcttctc 399  Q
    ||||||||||| |||| ||||||||| |||||||||||||||||||||| |||||    
T  868040 ggggtggttttaggtcgattcttgacatgaaatcacccctcttcatctttttctc 868094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 345 - 399
Target Start/End: Complemental strand, 10389959 - 10389905
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctcttcatcttcttctc 399  Q
    |||||||||||||||||||||||||| ||||||||| | |||||||||| |||||    
T  10389959 ggggtggttttgggtcaattcttgacctgaaatcactcatcttcatctttttctc 10389905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 346 - 399
Target Start/End: Original strand, 20569136 - 20569189
Alignment:
Q  346 gggtggttttgggtcaattcttgacttgaaatcacccctcttcatcttcttctc 399  Q
    |||||||||||||||||||||| || ||||||||||||||||||| || |||||    
T  20569136 gggtggttttgggtcaattcttaacctgaaatcacccctcttcatttttttctc 20569189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 346 - 399
Target Start/End: Complemental strand, 31381876 - 31381823
Alignment:
Q  346 gggtggttttgggtcaattcttgacttgaaatcacccctcttcatcttcttctc 399  Q
    ||||||||||||||||||||||||| |||||||||||||  ||||||| |||||    
T  31381876 gggtggttttgggtcaattcttgacctgaaatcaccccttctcatctttttctc 31381823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 345 - 393
Target Start/End: Original strand, 1531789 - 1531837
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctcttcatctt 393  Q
    |||||||| ||||||||||||||||| |||||||||||||||| |||||    
T  1531789 ggggtggtattgggtcaattcttgacctgaaatcacccctctttatctt 1531837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 343 - 399
Target Start/End: Complemental strand, 5333738 - 5333683
Alignment:
Q  343 ttggggtggttttgggtcaattcttgacttgaaatcacccctcttcatcttcttctc 399  Q
    |||||||||||||||||||||| ||||| |||||||| ||||||||||||| |||||    
T  5333738 ttggggtggttttgggtcaatttttgacatgaaatca-ccctcttcatctttttctc 5333683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 345 - 393
Target Start/End: Original strand, 6972692 - 6972740
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctcttcatctt 393  Q
    |||||||||||||||||||||||||  |||||||||| |||||||||||    
T  6972692 ggggtggttttgggtcaattcttgatctgaaatcacctctcttcatctt 6972740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 345 - 393
Target Start/End: Complemental strand, 9645755 - 9645707
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctcttcatctt 393  Q
    ||||| |||||||||||||||||||| ||| ||||||||||||||||||    
T  9645755 ggggtcgttttgggtcaattcttgacctgatatcacccctcttcatctt 9645707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 347 - 399
Target Start/End: Complemental strand, 50766713 - 50766661
Alignment:
Q  347 ggtggttttgggtcaattcttgacttgaaatcacccctcttcatcttcttctc 399  Q
    |||||||||||||||||||||||  |||||||| ||||||||||||| |||||    
T  50766713 ggtggttttgggtcaattcttgatctgaaatcatccctcttcatctttttctc 50766661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 347 - 399
Target Start/End: Original strand, 56194484 - 56194536
Alignment:
Q  347 ggtggttttgggtcaattcttgacttgaaatcacccctcttcatcttcttctc 399  Q
    |||||||||||||||||||||||| ||||||||  |||||||||||| |||||    
T  56194484 ggtggttttgggtcaattcttgacctgaaatcaaacctcttcatctttttctc 56194536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 345 - 391
Target Start/End: Original strand, 9283794 - 9283840
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctcttcatc 391  Q
    ||||||||||||||||||| ||| || ||||||||||||||||||||    
T  9283794 ggggtggttttgggtcaatacttaacctgaaatcacccctcttcatc 9283840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 345 - 399
Target Start/End: Complemental strand, 10359752 - 10359698
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctcttcatcttcttctc 399  Q
    |||||||||||||||||||| ||||| |||||||||||  ||||||||| |||||    
T  10359752 ggggtggttttgggtcaatttttgacctgaaatcacccaacttcatctttttctc 10359698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 345 - 399
Target Start/End: Complemental strand, 35965181 - 35965127
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctcttcatcttcttctc 399  Q
    |||||||||||||||||||| || || |||||||||| ||||||||||| |||||    
T  35965181 ggggtggttttgggtcaattttttacctgaaatcacctctcttcatctttttctc 35965127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 345 - 399
Target Start/End: Complemental strand, 38706916 - 38706862
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctcttcatcttcttctc 399  Q
    |||||||||||||||||||||||||  | ||||||||| |||||||||| |||||    
T  38706916 ggggtggttttgggtcaattcttgatctaaaatcacccttcttcatctttttctc 38706862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 345 - 386
Target Start/End: Original strand, 44947286 - 44947327
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctct 386  Q
    |||||||||||||||||||||||||| |||||||||| ||||    
T  44947286 ggggtggttttgggtcaattcttgacctgaaatcacctctct 44947327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 345 - 393
Target Start/End: Original strand, 12265338 - 12265386
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctcttcatctt 393  Q
    |||||| |||| |||||||| ||||| ||||||||||||||||||||||    
T  12265338 ggggtgatttttggtcaatttttgacctgaaatcacccctcttcatctt 12265386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 348 - 399
Target Start/End: Complemental strand, 37188795 - 37188744
Alignment:
Q  348 gtggttttgggtcaattcttgacttgaaatcacccctcttcatcttcttctc 399  Q
    ||||||||||||||||| ||||| ||||||||| | |||||||||| |||||    
T  37188795 gtggttttgggtcaattattgacctgaaatcactcatcttcatctttttctc 37188744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 345 - 399
Target Start/End: Complemental strand, 2115794 - 2115740
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctcttcatcttcttctc 399  Q
    |||||||||||||||||||| ||||| |||||||||   |||||||||| |||||    
T  2115794 ggggtggttttgggtcaattattgacctgaaatcacttttcttcatctttttctc 2115740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 345 - 399
Target Start/End: Original strand, 43444276 - 43444330
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctcttcatcttcttctc 399  Q
    ||||| |||||||||||||| ||||  ||||||||||| |||||||||| |||||    
T  43444276 ggggtagttttgggtcaatttttgatctgaaatcacccatcttcatctttttctc 43444330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 353 - 391
Target Start/End: Complemental strand, 53616849 - 53616811
Alignment:
Q  353 tttgggtcaattcttgacttgaaatcacccctcttcatc 391  Q
    |||||||||||||||||| |||||||||| |||||||||    
T  53616849 tttgggtcaattcttgacctgaaatcaccactcttcatc 53616811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 345 - 389
Target Start/End: Original strand, 50179654 - 50179698
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctcttca 389  Q
    ||||||||||||||||||||||| || ||||||||| | ||||||    
T  50179654 ggggtggttttgggtcaattcttaacctgaaatcactcatcttca 50179698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 1e-17; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 345 - 399
Target Start/End: Complemental strand, 44907605 - 44907551
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctcttcatcttcttctc 399  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  44907605 ggggtggttttgggtcaattcttgacctgaaatcacccctcttcatctttttctc 44907551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 345 - 399
Target Start/End: Complemental strand, 3850661 - 3850607
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctcttcatcttcttctc 399  Q
    ||||||||||||| |||||||||||| |||||||||||||||||||||| |||||    
T  3850661 ggggtggttttggatcaattcttgacctgaaatcacccctcttcatctttttctc 3850607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 346 - 399
Target Start/End: Original strand, 14464377 - 14464430
Alignment:
Q  346 gggtggttttgggtcaattcttgacttgaaatcacccctcttcatcttcttctc 399  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||||| |||||    
T  14464377 gggtggttttgggtcaattcttgacctgaaatcacccctattcatctttttctc 14464430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 346 - 391
Target Start/End: Complemental strand, 49552428 - 49552383
Alignment:
Q  346 gggtggttttgggtcaattcttgacttgaaatcacccctcttcatc 391  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||    
T  49552428 gggtggttttgggtcaattcttgacctgaaatcacccctcttcatc 49552383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 345 - 399
Target Start/End: Original strand, 4178433 - 4178487
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctcttcatcttcttctc 399  Q
    |||||||||||||||||||||||||| | ||||||||| |||||||||| |||||    
T  4178433 ggggtggttttgggtcaattcttgacctaaaatcacccatcttcatctttttctc 4178487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 345 - 399
Target Start/End: Original strand, 25162305 - 25162359
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctcttcatcttcttctc 399  Q
    |||||||||||| |||||||||||| |||||||||||| |||||||||| |||||    
T  25162305 ggggtggttttgtgtcaattcttgatttgaaatcacccatcttcatctttttctc 25162359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 349 - 399
Target Start/End: Original strand, 36905994 - 36906044
Alignment:
Q  349 tggttttgggtcaattcttgacttgaaatcacccctcttcatcttcttctc 399  Q
    |||||||||||||||||||||| ||||||||||| |||||||||| |||||    
T  36905994 tggttttgggtcaattcttgacctgaaatcacccttcttcatctttttctc 36906044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 349 - 393
Target Start/End: Complemental strand, 6823599 - 6823555
Alignment:
Q  349 tggttttgggtcaattcttgacttgaaatcacccctcttcatctt 393  Q
    |||||||||||||||||||||  ||||||||||||||||||||||    
T  6823599 tggttttgggtcaattcttgatctgaaatcacccctcttcatctt 6823555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 345 - 393
Target Start/End: Original strand, 46934511 - 46934559
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctcttcatctt 393  Q
    ||||||||||| |||||||| ||||| ||||||||||||||||||||||    
T  46934511 ggggtggtttttggtcaatttttgacctgaaatcacccctcttcatctt 46934559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 345 - 399
Target Start/End: Original strand, 22802890 - 22802944
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctcttcatcttcttctc 399  Q
    |||||| ||||||||||||| ||||| ||||||||| |||||||||||| |||||    
T  22802890 ggggtgattttgggtcaatttttgacatgaaatcactcctcttcatctttttctc 22802944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 345 - 399
Target Start/End: Original strand, 29503331 - 29503385
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctcttcatcttcttctc 399  Q
    |||||| ||||||||||||||||||| ||||||||||| ||||||| || |||||    
T  29503331 ggggtgattttgggtcaattcttgacctgaaatcacccatcttcatatttttctc 29503385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 345 - 391
Target Start/End: Original strand, 32607337 - 32607382
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctcttcatc 391  Q
    |||||||||||||||||||||||||| |||||| |||||||||||||    
T  32607337 ggggtggttttgggtcaattcttgacctgaaat-acccctcttcatc 32607382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 349 - 399
Target Start/End: Complemental strand, 50611619 - 50611569
Alignment:
Q  349 tggttttgggtcaattcttgacttgaaatcacccctcttcatcttcttctc 399  Q
    |||||||||||||||| ||||| | |||||||||||||||||||| |||||    
T  50611619 tggttttgggtcaattattgacctaaaatcacccctcttcatctttttctc 50611569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 345 - 399
Target Start/End: Complemental strand, 51202455 - 51202401
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctcttcatcttcttctc 399  Q
    |||||| ||||||||||||||||||| ||||||||||| ||||||| || |||||    
T  51202455 ggggtgattttgggtcaattcttgacctgaaatcacccatcttcatatttttctc 51202401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 345 - 393
Target Start/End: Original strand, 12115962 - 12116010
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctcttcatctt 393  Q
    |||||||||||| ||||||||||||| |||||||| | |||||||||||    
T  12115962 ggggtggttttgagtcaattcttgacctgaaatcatctctcttcatctt 12116010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 347 - 399
Target Start/End: Complemental strand, 38440781 - 38440729
Alignment:
Q  347 ggtggttttgggtcaattcttgacttgaaatcacccctcttcatcttcttctc 399  Q
    |||||||||| ||||||||||||| ||||||||| |||||| ||||| |||||    
T  38440781 ggtggttttgagtcaattcttgacctgaaatcactcctctttatctttttctc 38440729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 347 - 399
Target Start/End: Original strand, 46178447 - 46178499
Alignment:
Q  347 ggtggttttgggtcaattcttgacttgaaatcacccctcttcatcttcttctc 399  Q
    ||||||||||||||||||  |||| |||||||| ||||||||||||| |||||    
T  46178447 ggtggttttgggtcaatttatgacctgaaatcatccctcttcatctttttctc 46178499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 348 - 399
Target Start/End: Complemental strand, 39917599 - 39917548
Alignment:
Q  348 gtggttttgggtcaattcttgacttgaaatcacccctcttcatcttcttctc 399  Q
    ||||||||||||||||||||||| |||||||| || ||||||| || |||||    
T  39917599 gtggttttgggtcaattcttgacctgaaatcatccatcttcatatttttctc 39917548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 345 - 399
Target Start/End: Original strand, 4172435 - 4172489
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctcttcatcttcttctc 399  Q
    ||||||||||||||||||||||| || | |||||| || |||||||||| |||||    
T  4172435 ggggtggttttgggtcaattcttaacataaaatcatccatcttcatctttttctc 4172489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 345 - 399
Target Start/End: Complemental strand, 25631733 - 25631679
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctcttcatcttcttctc 399  Q
    |||||||||||||||||||| ||||| | |||||| |||||| |||||| |||||    
T  25631733 ggggtggttttgggtcaatttttgacctaaaatcatccctctccatctttttctc 25631679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 345 - 399
Target Start/End: Complemental strand, 38855242 - 38855189
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctcttcatcttcttctc 399  Q
    ||||||||||||||||| ||||||||   |||||||||||||||||||| |||||    
T  38855242 ggggtggttttgggtca-ttcttgaccgaaaatcacccctcttcatctttttctc 38855189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 345 - 382
Target Start/End: Original strand, 25849689 - 25849726
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcaccc 382  Q
    |||||||||||| ||||||| |||||||||||||||||    
T  25849689 ggggtggttttgagtcaatttttgacttgaaatcaccc 25849726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 4e-17; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 346 - 399
Target Start/End: Original strand, 45128080 - 45128133
Alignment:
Q  346 gggtggttttgggtcaattcttgacttgaaatcacccctcttcatcttcttctc 399  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  45128080 gggtggttttgggtcaattcttgacctgaaatcacccctcttcatctttttctc 45128133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 347 - 399
Target Start/End: Complemental strand, 21570612 - 21570560
Alignment:
Q  347 ggtggttttgggtcaattcttgacttgaaatcacccctcttcatcttcttctc 399  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  21570612 ggtggttttgggtcaattcttgacctgaaatcacccctcttcatctttttctc 21570560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 345 - 392
Target Start/End: Complemental strand, 2808676 - 2808629
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctcttcatct 392  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||    
T  2808676 ggggtggttttgggtcaattcttgacctgaaatcacccctcttcatct 2808629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 345 - 399
Target Start/End: Complemental strand, 8971834 - 8971780
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctcttcatcttcttctc 399  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||| |||||    
T  8971834 ggggtggttttgggtcaattcttgacctgaaatcatccctcttcatctttttctc 8971780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 345 - 399
Target Start/End: Original strand, 36233880 - 36233934
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctcttcatcttcttctc 399  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||||| |||||    
T  36233880 ggggtggttttgggtcaattcatgacctgaaatcacccctcttcatctttttctc 36233934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 346 - 399
Target Start/End: Complemental strand, 27249356 - 27249303
Alignment:
Q  346 gggtggttttgggtcaattcttgacttgaaatcacccctcttcatcttcttctc 399  Q
    |||||||||||||||||| |||||| |||||||||||||||||||||| |||||    
T  27249356 gggtggttttgggtcaatacttgacctgaaatcacccctcttcatctttttctc 27249303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 345 - 393
Target Start/End: Original strand, 25086909 - 25086957
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctcttcatctt 393  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  25086909 ggggtggttttgggtcaattattgacctgaaatcacccctcttcatctt 25086957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 38 - 165
Target Start/End: Original strand, 44664678 - 44664805
Alignment:
Q  38 gagattcacctttgatgactttctcgaacttcaactttgccccaatttatttgttgaactcgataacagcaaaattagcgatatcaatcacatgtgggtt 137  Q
    |||||||||| ||||||| ||| || |  ||||| ||||||||| | |  |||||| ||||| ||||||||||||| |||||| ||||||| ||||| |     
T  44664678 gagattcacccttgatgagtttatcaagtttcaagtttgccccagtatgcttgttgtactcggtaacagcaaaattggcgataacaatcacgtgtggatc 44664777  T
Q  138 gttgatatctttgattcgactccaacca 165  Q
    |||||| || |||||| | |||||||||    
T  44664778 gttgatgtccttgattgggctccaacca 44664805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 345 - 391
Target Start/End: Complemental strand, 459480 - 459434
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctcttcatc 391  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||    
T  459480 ggggtggttttgggtcaatttttgacctgaaatcacccctcttcatc 459434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 345 - 399
Target Start/End: Original strand, 6173507 - 6173561
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctcttcatcttcttctc 399  Q
    ||||||||||| |||| ||||||||| |||||||||||||||||||||| |||||    
T  6173507 ggggtggttttcggtctattcttgacctgaaatcacccctcttcatctttttctc 6173561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 349 - 399
Target Start/End: Original strand, 27477034 - 27477084
Alignment:
Q  349 tggttttgggtcaattcttgacttgaaatcacccctcttcatcttcttctc 399  Q
    |||||||||||||||| ||||| |||||||||||||||||||||| |||||    
T  27477034 tggttttgggtcaattattgacatgaaatcacccctcttcatctttttctc 27477084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 345 - 399
Target Start/End: Original strand, 30420552 - 30420606
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctcttcatcttcttctc 399  Q
    ||||||||||||| |||||| ||||| |||||||||||||||||||||| |||||    
T  30420552 ggggtggttttggatcaatttttgacctgaaatcacccctcttcatctttttctc 30420606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 345 - 389
Target Start/End: Complemental strand, 9986553 - 9986509
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctcttca 389  Q
    |||||||||||||||||||||||||| |||||||| |||||||||    
T  9986553 ggggtggttttgggtcaattcttgacctgaaatcatccctcttca 9986509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 349 - 399
Target Start/End: Complemental strand, 7015912 - 7015862
Alignment:
Q  349 tggttttgggtcaattcttgacttgaaatcacccctcttcatcttcttctc 399  Q
    |||||||||||||||||||||| |||||||||||||| | ||||| |||||    
T  7015912 tggttttgggtcaattcttgacctgaaatcacccctcctaatctttttctc 7015862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 345 - 387
Target Start/End: Original strand, 32913117 - 32913159
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctctt 387  Q
    ||||||||||||| |||||||||||| ||||||||||||||||    
T  32913117 ggggtggttttggatcaattcttgacctgaaatcacccctctt 32913159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 345 - 399
Target Start/End: Complemental strand, 40626233 - 40626179
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctcttcatcttcttctc 399  Q
    |||||| ||||||||| ||||||||| ||||||||||||||||| |||| |||||    
T  40626233 ggggtgattttgggtctattcttgacctgaaatcacccctcttcgtctttttctc 40626179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 345 - 398
Target Start/End: Complemental strand, 3270434 - 3270381
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctcttcatcttcttct 398  Q
    |||||||||||||||||||||||||| ||||||||| | | |||||||| ||||    
T  3270434 ggggtggttttgggtcaattcttgacctgaaatcactcattttcatctttttct 3270381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 346 - 399
Target Start/End: Complemental strand, 40660134 - 40660081
Alignment:
Q  346 gggtggttttgggtcaattcttgacttgaaatcacccctcttcatcttcttctc 399  Q
    ||||||||||| ||||||||||||| ||||||||| | |||||||||| |||||    
T  40660134 gggtggttttgagtcaattcttgacctgaaatcacacatcttcatctttttctc 40660081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 361 - 393
Target Start/End: Original strand, 42949605 - 42949637
Alignment:
Q  361 aattcttgacttgaaatcacccctcttcatctt 393  Q
    |||||||||||||||||||||||||||||||||    
T  42949605 aattcttgacttgaaatcacccctcttcatctt 42949637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 348 - 399
Target Start/End: Original strand, 4192717 - 4192768
Alignment:
Q  348 gtggttttgggtcaattcttgacttgaaatcacccctcttcatcttcttctc 399  Q
    |||||||||| |||||| ||||| ||| |||||||||||||||||| |||||    
T  4192717 gtggttttggatcaatttttgacctgagatcacccctcttcatctttttctc 4192768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 345 - 399
Target Start/End: Original strand, 3725056 - 3725110
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctcttcatcttcttctc 399  Q
    |||||||||||||||||||| ||||| | ||||||  |||||||||||| |||||    
T  3725056 ggggtggttttgggtcaatttttgacctaaaatcattcctcttcatctttttctc 3725110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 345 - 399
Target Start/End: Complemental strand, 32680788 - 32680734
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctcttcatcttcttctc 399  Q
    ||||||||||| |||| ||||||||| ||||||||| | |||||||||| |||||    
T  32680788 ggggtggttttcggtcgattcttgacctgaaatcactcatcttcatctttttctc 32680734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 345 - 391
Target Start/End: Complemental strand, 41712971 - 41712925
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctcttcatc 391  Q
    ||||||||||||||| |||||||||| ||||||||||| | ||||||    
T  41712971 ggggtggttttgggttaattcttgacgtgaaatcacccattttcatc 41712925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 349 - 390
Target Start/End: Original strand, 4228011 - 4228052
Alignment:
Q  349 tggttttgggtcaattcttgacttgaaatcacccctcttcat 390  Q
    |||||||||||||||||||||| ||||||||| | |||||||    
T  4228011 tggttttgggtcaattcttgacctgaaatcacacatcttcat 4228052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0495 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0495
Description:

Target: scaffold0495; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 345 - 393
Target Start/End: Original strand, 5269 - 5317
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctcttcatctt 393  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  5269 ggggtggttttgggtcaattcttgacctgaaatcacccctcttcatctt 5317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 345 - 399
Target Start/End: Complemental strand, 51868851 - 51868797
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctcttcatcttcttctc 399  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||||| |||||    
T  51868851 ggggtggttttgggttaattcttgacctgaaatcacccctcttcatctttttctc 51868797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 345 - 399
Target Start/End: Original strand, 51871739 - 51871793
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctcttcatcttcttctc 399  Q
    |||||||||||||||||||||||||| | |||||||||||||||||||| |||||    
T  51871739 ggggtggttttgggtcaattcttgacctaaaatcacccctcttcatctttttctc 51871793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 345 - 390
Target Start/End: Original strand, 9172363 - 9172408
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctcttcat 390  Q
    |||||||||||||||||||||||||| |||||||||||||||||||    
T  9172363 ggggtggttttgggtcaattcttgacctgaaatcacccctcttcat 9172408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 345 - 390
Target Start/End: Original strand, 9180345 - 9180390
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctcttcat 390  Q
    |||||||||||||||||||||||||| |||||||||||||||||||    
T  9180345 ggggtggttttgggtcaattcttgacctgaaatcacccctcttcat 9180390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 346 - 399
Target Start/End: Complemental strand, 25728164 - 25728111
Alignment:
Q  346 gggtggttttgggtcaattcttgacttgaaatcacccctcttcatcttcttctc 399  Q
    ||||||||||||||||||||||||| ||||||||| |||||||||||| |||||    
T  25728164 gggtggttttgggtcaattcttgacctgaaatcactcctcttcatctttttctc 25728111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 345 - 390
Target Start/End: Complemental strand, 33291625 - 33291580
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctcttcat 390  Q
    |||||||||||||||||||||||||| |||||||||||||||||||    
T  33291625 ggggtggttttgggtcaattcttgacctgaaatcacccctcttcat 33291580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 346 - 399
Target Start/End: Complemental strand, 50272345 - 50272292
Alignment:
Q  346 gggtggttttgggtcaattcttgacttgaaatcacccctcttcatcttcttctc 399  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||||| |||||    
T  50272345 gggtggttttgggtcaattcttgacctgaaatcacccctattcatctttttctc 50272292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 345 - 399
Target Start/End: Complemental strand, 25406490 - 25406436
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctcttcatcttcttctc 399  Q
    |||||| ||||||||||||||||||| ||||||||| |||||||||||| |||||    
T  25406490 ggggtgattttgggtcaattcttgacctgaaatcacacctcttcatctttttctc 25406436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 345 - 390
Target Start/End: Original strand, 7342597 - 7342642
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctcttcat 390  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||    
T  7342597 ggggtggttttgggtcaatttttgacctgaaatcacccctcttcat 7342642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 346 - 390
Target Start/End: Original strand, 19723209 - 19723253
Alignment:
Q  346 gggtggttttgggtcaattcttgacttgaaatcacccctcttcat 390  Q
    ||||||||||||||||||| |||||||||||||||| ||||||||    
T  19723209 gggtggttttgggtcaattattgacttgaaatcacctctcttcat 19723253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 341 - 393
Target Start/End: Original strand, 27872610 - 27872662
Alignment:
Q  341 tcttggggtggttttgggtcaattcttgacttgaaatcacccctcttcatctt 393  Q
    |||| ||||||||||||||||||| ||||| ||||||||||| ||||||||||    
T  27872610 tcttcgggtggttttgggtcaatttttgacatgaaatcacccatcttcatctt 27872662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 353 - 399
Target Start/End: Original strand, 5701140 - 5701186
Alignment:
Q  353 tttgggtcaattcttgacttgaaatcacccctcttcatcttcttctc 399  Q
    ||||||||||| |||||| |||||||||||||||||||||| |||||    
T  5701140 tttgggtcaatacttgacctgaaatcacccctcttcatctttttctc 5701186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 345 - 399
Target Start/End: Original strand, 20266177 - 20266231
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctcttcatcttcttctc 399  Q
    |||||||||||||||||||||||||  | ||||||||| |||||||||| |||||    
T  20266177 ggggtggttttgggtcaattcttgatctaaaatcacccatcttcatctttttctc 20266231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 345 - 399
Target Start/End: Complemental strand, 30818551 - 30818497
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctcttcatcttcttctc 399  Q
    ||||| |||||||||||||| ||||| ||||||||||| |||||||||| |||||    
T  30818551 ggggtagttttgggtcaattattgacctgaaatcacccatcttcatctttttctc 30818497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 345 - 399
Target Start/End: Complemental strand, 45426268 - 45426214
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctcttcatcttcttctc 399  Q
    ||||||||||||||||||||||||| |||||||||||  | |||||||| |||||    
T  45426268 ggggtggttttgggtcaattcttgatttgaaatcacctattttcatctttttctc 45426214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 345 - 398
Target Start/End: Original strand, 40646563 - 40646616
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctcttcatcttcttct 398  Q
    |||||||||||||||||||||||||| | ||||||| | |||||||||| ||||    
T  40646563 ggggtggttttgggtcaattcttgacctaaaatcactcatcttcatctttttct 40646616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 347 - 399
Target Start/End: Original strand, 14545397 - 14545449
Alignment:
Q  347 ggtggttttgggtcaattcttgacttgaaatcacccctcttcatcttcttctc 399  Q
    |||||||||| ||||||||||||| ||||||||| | |||||||||| |||||    
T  14545397 ggtggttttgtgtcaattcttgacctgaaatcactcatcttcatctttttctc 14545449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 347 - 399
Target Start/End: Complemental strand, 19716100 - 19716049
Alignment:
Q  347 ggtggttttgggtcaattcttgacttgaaatcacccctcttcatcttcttctc 399  Q
    |||||||||||||||||||||||  |||||||| ||||||||||||| |||||    
T  19716100 ggtggttttgggtcaattcttgatctgaaatca-ccctcttcatctttttctc 19716049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 347 - 399
Target Start/End: Original strand, 28035016 - 28035068
Alignment:
Q  347 ggtggttttgggtcaattcttgacttgaaatcacccctcttcatcttcttctc 399  Q
    |||||||||||||||||| ||||| ||||||||| | |||||||||| |||||    
T  28035016 ggtggttttgggtcaattattgacctgaaatcactcatcttcatctttttctc 28035068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 352 - 399
Target Start/End: Complemental strand, 5324756 - 5324709
Alignment:
Q  352 ttttgggtcaattcttgacttgaaatcacccctcttcatcttcttctc 399  Q
    ||||||||||||||||||| || ||||||| ||||||||||| |||||    
T  5324756 ttttgggtcaattcttgacctggaatcacctctcttcatctttttctc 5324709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 345 - 399
Target Start/End: Original strand, 7997662 - 7997716
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctcttcatcttcttctc 399  Q
    ||||||||||||||| |||| ||||  ||||||||||| |||||||||| |||||    
T  7997662 ggggtggttttgggttaatttttgatctgaaatcacccttcttcatctttttctc 7997716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 345 - 399
Target Start/End: Complemental strand, 18569516 - 18569462
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctcttcatcttcttctc 399  Q
    |||||||||||||||||||| |||||  |||||||||  |||||||||| |||||    
T  18569516 ggggtggttttgggtcaatttttgacaagaaatcacctgtcttcatctttttctc 18569462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 345 - 399
Target Start/End: Original strand, 30878950 - 30879004
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctcttcatcttcttctc 399  Q
    |||||||||||||||||||| ||||| ||| |||| | ||||||||||| |||||    
T  30878950 ggggtggttttgggtcaatttttgacctgagatcatctctcttcatctttttctc 30879004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 345 - 399
Target Start/End: Complemental strand, 35584827 - 35584773
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctcttcatcttcttctc 399  Q
    |||||| |||||||||||||||| || ||||||||| | |||||||||| |||||    
T  35584827 ggggtgattttgggtcaattcttaacctgaaatcactcatcttcatctttttctc 35584773  T

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Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 349 - 399
Target Start/End: Complemental strand, 40881215 - 40881165
Alignment:
Q  349 tggttttgggtcaattcttgacttgaaatcacccctcttcatcttcttctc 399  Q
    |||||||||||||||||||||| | ||||||| | |||||||||| |||||    
T  40881215 tggttttgggtcaattcttgacctaaaatcactcatcttcatctttttctc 40881165  T

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Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 346 - 399
Target Start/End: Complemental strand, 48365956 - 48365903
Alignment:
Q  346 gggtggttttgggtcaattcttgacttgaaatcacccctcttcatcttcttctc 399  Q
    ||||||||||||||||||| ||||  ||||||||||  |||||||||| |||||    
T  48365956 gggtggttttgggtcaatttttgaaatgaaatcacctatcttcatctttttctc 48365903  T

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Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 345 - 398
Target Start/End: Complemental strand, 50166305 - 50166252
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctcttcatcttcttct 398  Q
    |||||||||||||||||||| ||||| ||||||  |||||||| ||||| ||||    
T  50166305 ggggtggttttgggtcaattattgacctgaaattgcccctctttatctttttct 50166252  T

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Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 345 - 393
Target Start/End: Original strand, 44637297 - 44637344
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctcttcatctt 393  Q
    |||||||||||||||||||| ||||| | |||||||| |||||||||||    
T  44637297 ggggtggttttgggtcaatt-ttgacataaaatcacctctcttcatctt 44637344  T

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Target: scaffold0003 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 345 - 399
Target Start/End: Complemental strand, 362000 - 361946
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctcttcatcttcttctc 399  Q
    |||||||||||| ||||||||||||| ||||||||||||||| |||||| |||||    
T  362000 ggggtggttttgagtcaattcttgacctgaaatcacccctctccatctttttctc 361946  T

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Target: scaffold0311 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 345 - 393
Target Start/End: Original strand, 8591 - 8639
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctcttcatctt 393  Q
    ||||||||||||||| ||||||| |||||||||||||||| ||||||||    
T  8591 ggggtggttttgggttaattcttaacttgaaatcaccccttttcatctt 8639  T

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Target: scaffold0426 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0426
Description:

Target: scaffold0426; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 346 - 393
Target Start/End: Original strand, 6210 - 6257
Alignment:
Q  346 gggtggttttgggtcaattcttgacttgaaatcacccctcttcatctt 393  Q
    |||||||||  |||||||||||||| | ||||||||||||||||||||    
T  6210 gggtggtttcaggtcaattcttgacctaaaatcacccctcttcatctt 6257  T

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Target: scaffold0608 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0608
Description:

Target: scaffold0608; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 345 - 389
Target Start/End: Original strand, 113 - 157
Alignment:
Q  345 ggggtggttttgggtcaattcttgacttgaaatcacccctcttca 389  Q
    ||||||||||||||||||||||| || ||||||||| | ||||||    
T  113 ggggtggttttgggtcaattcttaacctgaaatcactcatcttca 157  T

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Target: scaffold0011 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 346 - 386
Target Start/End: Original strand, 11011 - 11051
Alignment:
Q  346 gggtggttttgggtcaattcttgacttgaaatcacccctct 386  Q
    ||||| ||||||||||||| ||||||| |||||||||||||    
T  11011 gggtgattttgggtcaatttttgacttaaaatcacccctct 11051  T

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