View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3410_low_38 (Length: 258)

Name: NF3410_low_38
Description: NF3410
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3410_low_38
NF3410_low_38
[»] chr8 (5 HSPs)
chr8 (1-242)||(6312383-6312625)
chr8 (4-102)||(44260883-44260981)
chr8 (104-239)||(44260670-44260806)
chr8 (2-35)||(6312650-6312683)
chr8 (5-45)||(26024791-26024831)
[»] chr5 (7 HSPs)
chr5 (1-107)||(7433911-7434018)
chr5 (105-234)||(10505212-10505337)
chr5 (4-51)||(10523572-10523619)
chr5 (55-102)||(10505098-10505145)
chr5 (1-48)||(10505012-10505059)
chr5 (3-52)||(36130390-36130438)
chr5 (20-67)||(7433880-7433928)
[»] chr3 (2 HSPs)
chr3 (109-239)||(43820912-43821043)
chr3 (1-66)||(40542404-40542470)
[»] chr1 (6 HSPs)
chr1 (170-239)||(14588215-14588284)
chr1 (5-97)||(26921425-26921518)
chr1 (8-102)||(15256574-15256669)
chr1 (1-36)||(14588449-14588484)
chr1 (5-38)||(14588547-14588580)
chr1 (1-65)||(15256795-15256860)
[»] chr2 (5 HSPs)
chr2 (170-238)||(37202313-37202381)
chr2 (107-234)||(45139333-45139461)
chr2 (26-102)||(37772020-37772097)
chr2 (3-44)||(37202539-37202580)
chr2 (203-239)||(37772274-37772310)
[»] chr4 (8 HSPs)
chr4 (170-231)||(34747485-34747546)
chr4 (1-45)||(29381448-29381492)
chr4 (1-39)||(31199058-31199096)
chr4 (1-69)||(8492307-8492376)
chr4 (5-35)||(31198760-31198790)
chr4 (1-35)||(47548111-47548145)
chr4 (1-70)||(25735308-25735379)
chr4 (4-52)||(34747196-34747244)


Alignment Details
Target: chr8 (Bit Score: 231; Significance: 1e-127; HSPs: 5)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 6312625 - 6312383
Alignment:
Q  1 tccggtagataactatcggatgttcattttaaaaatttcgattttctacctc-gttagataactaccgaattattgctcatttaacattttgttttacat 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  6312625 tccggtagataactatcggatgttcattttaaaaatttcgattttctacctccgttagataactaccgaattattgctcatttaacattttgttttacat 6312526  T
Q  100 aaccctgattacctaaccgaaccaccaatctcaacccactcatccatctgaatgcggaatccccacctttcaattatccatcatcatcaaaacctatcaa 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6312525 aaccctgattacctaaccgaaccaccaatctcaacccactcatccatctgaatgcggaatccccacctttcaattatccatcatcatcaaaacctatcaa 6312426  T
Q  200 atctgctaattgatcgcaattgagtgaagattgacgctatatg 242  Q
    || ||||||||||||||||||||||||||||||||||||||||    
T  6312425 atttgctaattgatcgcaattgagtgaagattgacgctatatg 6312383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 102
Target Start/End: Complemental strand, 44260981 - 44260883
Alignment:
Q  4 ggtagataactatcggatgttcattttaaaaatttcgattttctacc-tcgttagataactaccgaattattgctcatttaacattttgttttacataac 102  Q
    ||||||||| | ||||||||||||||||||||||| |||||| |||| ||| |||||||||| || |||||||| || ||| ||| ||||||||||||||    
T  44260981 ggtagataattgtcggatgttcattttaaaaattt-gattttgtaccttcgatagataactaacggattattgcccacttagcatattgttttacataac 44260883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 239
Target Start/End: Complemental strand, 44260806 - 44260670
Alignment:
Q  104 ctgattacctaaccgaaccaccaatctcaacccactcatc-catctgaatgcggaatccccacctttcaattatccatcatcatcaaaacctatcaaatc 202  Q
    |||||||||||||||||||||||||||||||||||||| | ||   ||| || ||||   || | | |||||||||| |||||| |||||| |  |||      
T  44260806 ctgattacctaaccgaaccaccaatctcaacccactcacctcaagcgaacgccgaataatcatcgtccaattatccaccatcataaaaacccactaaaca 44260707  T
Q  203 tgctaattgatcgcaattgagtgaagattgacgctat 239  Q
    |||||||||||  ||||||||||| ||||||||||||    
T  44260706 tgctaattgattacaattgagtgatgattgacgctat 44260670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 2 - 35
Target Start/End: Complemental strand, 6312683 - 6312650
Alignment:
Q  2 ccggtagataactatcggatgttcattttaaaaa 35  Q
    |||||||||||||| |||||||||||||||||||    
T  6312683 ccggtagataactaccggatgttcattttaaaaa 6312650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 26024791 - 26024831
Alignment:
Q  5 gtagataactatcggatgttcattttaaaaatttcgatttt 45  Q
    ||||||||||||||||| |||||||||||| |||| |||||    
T  26024791 gtagataactatcggatattcattttaaaattttccatttt 26024831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 48; Significance: 2e-18; HSPs: 7)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 7433911 - 7434018
Alignment:
Q  1 tccggtagataactatcggatgttcattttaaaaatttcgattttctacct-cgttagataactaccgaattattgctcatttaacattttgttttacat 99  Q
    ||||||||||||||| |||||||||||||| |||||| |  |||| ||||| || |||||||||||   |||||||| |||||||| |||||||||||||    
T  7433911 tccggtagataactaccggatgttcatttttaaaattccatttttgtacctccgatagataactacaagattattgcccatttaaccttttgttttacat 7434010  T
Q  100 aaccctga 107  Q
    ||| ||||    
T  7434011 aacactga 7434018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 105 - 234
Target Start/End: Original strand, 10505212 - 10505337
Alignment:
Q  105 tgattacctaaccgaaccaccaatctcaacccactcatccatctgaatgcggaatccccacctttcaattatccatcatcatcaaaacctatcaaatctg 204  Q
    ||||||||||||||||||||||||||||||| ||||  |   |  || |  |||||| |||| | |||||||||||||||||||||||| | |    |||    
T  10505212 tgattacctaaccgaaccaccaatctcaaccgactccccacgcgaaacgtcgaatcctcaccgtccaattatccatcatcatcaaaacccacc----ctg 10505307  T
Q  205 ctaattgatcgcaattgagtgaagattgac 234  Q
    || |||||||||||||||||||| ||||||    
T  10505308 ctcattgatcgcaattgagtgaatattgac 10505337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 10523619 - 10523572
Alignment:
Q  4 ggtagataactatcggatgttcattttaaaaatttcgattttctacct 51  Q
    |||||||||||| ||||||||||||||||||||||| |||||||||||    
T  10523619 ggtagataactaccggatgttcattttaaaaatttctattttctacct 10523572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 55 - 102
Target Start/End: Original strand, 10505098 - 10505145
Alignment:
Q  55 tagataactaccgaattattgctcatttaacattttgttttacataac 102  Q
    ||||||||||||| |||||||| |||||||| ||||||||||||||||    
T  10505098 tagataactaccggattattgcccatttaaccttttgttttacataac 10505145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 10505012 - 10505059
Alignment:
Q  1 tccggtagataactatcggatgttcattttaaaaatttcgattttcta 48  Q
    ||||||||||||||| || |||||||||||||||||| | ||||||||    
T  10505012 tccggtagataactaccgaatgttcattttaaaaattcctattttcta 10505059  T

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Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 3 - 52
Target Start/End: Original strand, 36130390 - 36130438
Alignment:
Q  3 cggtagataactatcggatgttcattttaaaaatttcgattttctacctc 52  Q
    ||||||||||||| ||| |||||||||| |||||||| ||||||||||||    
T  36130390 cggtagataactaccgggtgttcatttt-aaaatttcaattttctacctc 36130438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 67
Target Start/End: Original strand, 7433880 - 7433928
Alignment:
Q  20 atgttcattttaaaaatttcgattttctacct-cgttagataactaccg 67  Q
    |||||||||||||||||||| ||| ||||||| || |||||||||||||    
T  7433880 atgttcattttaaaaatttccattatctacctccggtagataactaccg 7433928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 109 - 239
Target Start/End: Original strand, 43820912 - 43821043
Alignment:
Q  109 tacctaaccgaaccaccaatctcaacccactcatccatct-gaatgcggaatccccacctttcaattatccatcatcatcaaaacctatcaaatctgcta 207  Q
    ||||||| ||||||||||||||||||||||||| ||  |  ||| || |||||| |||  | |||||||| | |||||| |||||| | ||||| || ||    
T  43820912 tacctaatcgaaccaccaatctcaacccactcaccccacaagaacgccgaatccgcactgtccaattatctaccatcataaaaacccaccaaatatgtta 43821011  T
Q  208 attgatcgcaattgagtgaagattgacgctat 239  Q
    ||||||| ||||||||||||||||||||||||    
T  43821012 attgatctcaattgagtgaagattgacgctat 43821043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 40542404 - 40542470
Alignment:
Q  1 tccggtagataactatcggatgttcattttaaaaatttcgattttctacctc-gttagataactacc 66  Q
    ||||||||||||||| |||||||||||||| |||||||  |||||||||||| | ||||||||||||    
T  40542404 tccggtagataactaccggatgttcatttttaaaattttcattttctacctctggtagataactacc 40542470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 170 - 239
Target Start/End: Original strand, 14588215 - 14588284
Alignment:
Q  170 caattatccatcatcatcaaaacctatcaaatctgctaattgatcgcaattgagtgaagattgacgctat 239  Q
    |||||||||| |||||||||||   | ||||| ||||||||||||||||||||||||| |||||||||||    
T  14588215 caattatccaccatcatcaaaattcaccaaatatgctaattgatcgcaattgagtgaatattgacgctat 14588284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 97
Target Start/End: Complemental strand, 26921518 - 26921425
Alignment:
Q  5 gtagataactatcggatgttcattttaaaaatttcgattttctacctc-gttagataactaccgaattattgctcatttaacattttgttttac 97  Q
    ||||||||| |||| ||||| |||||||||| ||  ||||| |||||| | ||||||||| ||| ||||||||||||||| | |||||||||||    
T  26921518 gtagataacaatcgaatgtttattttaaaaaatttcattttttacctccggtagataactgccggattattgctcatttagccttttgttttac 26921425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 102
Target Start/End: Original strand, 15256574 - 15256669
Alignment:
Q  8 gataactatcggatgttcattttaaaaatttcgattttctacctc-gttagataactaccgaattattgctcatttaacattttgttttacataac 102  Q
    |||||||| |||| |||||||||||||| ||  |||||||||||| | |  ||||||||| ||||| | | |||||||| ||||||||||||||||    
T  15256574 gataactaacggaagttcattttaaaaaatttcattttctacctctggtgaataactaccaaattagtacccatttaaccttttgttttacataac 15256669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 14588484 - 14588449
Alignment:
Q  1 tccggtagataactatcggatgttcattttaaaaat 36  Q
    ||||||||||||||||||||| ||||||||||||||    
T  14588484 tccggtagataactatcggattttcattttaaaaat 14588449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 14588580 - 14588547
Alignment:
Q  5 gtagataactatcggatgttcattttaaaaattt 38  Q
    |||||||| |||||||||||||||||||||||||    
T  14588580 gtagataattatcggatgttcattttaaaaattt 14588547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 15256860 - 15256795
Alignment:
Q  1 tccggtagataactatcggatgttcattttaaaaatttcgattttctacct-cgttagataactac 65  Q
    ||||||||||||| | ||||||||||||||||||| ||  ||||| ||||| || |||||||||||    
T  15256860 tccggtagataaccaccggatgttcattttaaaaaatttcattttatacctccggtagataactac 15256795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 170 - 238
Target Start/End: Original strand, 37202313 - 37202381
Alignment:
Q  170 caattatccatcatcatcaaaacctatcaaatctgctaattgatcgcaattgagtgaagattgacgcta 238  Q
    |||||||||| |||||||||| |  | ||||  ||||||||||||||||||||||||||||||||||||    
T  37202313 caattatccaccatcatcaaatctcaccaaacttgctaattgatcgcaattgagtgaagattgacgcta 37202381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 107 - 234
Target Start/End: Complemental strand, 45139461 - 45139333
Alignment:
Q  107 attacctaaccgaaccaccaatctcaacccactcatccatct-gaatgcggaatccccacctttcaattatccatcatcatcaaaacctatcaaatctgc 205  Q
    ||||||||||||||||||||||||||||||||  | |   |  |||||  |||||| |||||| |||||||| | ||||||||||||| ||  ||  |||    
T  45139461 attacctaaccgaaccaccaatctcaacccacctaccttacgcgaatgtcgaatcctcaccttccaattatcaaccatcatcaaaacccattgaacatgc 45139362  T
Q  206 taattgatcgcaattgagtgaagattgac 234  Q
    ||||||||| |||||||||||| ||||||    
T  45139361 taattgatctcaattgagtgaatattgac 45139333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 102
Target Start/End: Original strand, 37772020 - 37772097
Alignment:
Q  26 attttaaaaatttcgattttctacct-cgttagataactaccgaattattgctcatttaacattttgttttacataac 102  Q
    |||||||||||||| ||||||||||| || |||||||||| |||| |||| |||||||||| ||||| ||||| ||||    
T  37772020 attttaaaaatttctattttctacctccggtagataactatcgaaatatttctcatttaaccttttggtttacttaac 37772097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 44
Target Start/End: Complemental strand, 37202580 - 37202539
Alignment:
Q  3 cggtagataactatcggatgttcattttaaaaatttcgattt 44  Q
    ||||||||||||| |||||||||||||| |||||||||||||    
T  37202580 cggtagataactagcggatgttcattttcaaaatttcgattt 37202539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 239
Target Start/End: Original strand, 37772274 - 37772310
Alignment:
Q  203 tgctaattgatcgcaattgagtgaagattgacgctat 239  Q
    ||||||||||||||||||| | |||||||||||||||    
T  37772274 tgctaattgatcgcaattgggggaagattgacgctat 37772310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 38; Significance: 0.000000000001; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 231
Target Start/End: Original strand, 34747485 - 34747546
Alignment:
Q  170 caattatccatcatcatcaaaacctatcaaatctgctaattgatcgcaattgagtgaagatt 231  Q
    ||||| |||| ||||||||||| | | |||| ||||||||||||||||||||||||||||||    
T  34747485 caattgtccaccatcatcaaaagccaccaaacctgctaattgatcgcaattgagtgaagatt 34747546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 29381492 - 29381448
Alignment:
Q  1 tccggtagataactatcggatgttcattttaaaaatttcgatttt 45  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||    
T  29381492 tccggtagataaatatcggatgttcatttttaaaatttcgatttt 29381448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 31199096 - 31199058
Alignment:
Q  1 tccggtagataactatcggatgttcattttaaaaatttc 39  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  31199096 tccggtagataactaccggatgttcattttaaaaatttc 31199058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 8492307 - 8492376
Alignment:
Q  1 tccggtagataactatcggatgttcattttaaaaatttcgatttt-ctacctcgttagataactaccgaa 69  Q
    ||||||||||||||| ||||||||| |||| ||||||||||||||  |||  || |||||||||||||||    
T  8492307 tccggtagataactaccggatgttccttttcaaaatttcgattttgttactccggtagataactaccgaa 8492376  T

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Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 35
Target Start/End: Original strand, 31198760 - 31198790
Alignment:
Q  5 gtagataactatcggatgttcattttaaaaa 35  Q
    |||||||||||||||||||||||||||||||    
T  31198760 gtagataactatcggatgttcattttaaaaa 31198790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 47548145 - 47548111
Alignment:
Q  1 tccggtagataactatcggatgttcattttaaaaa 35  Q
    |||| ||||||||||||||||||||||||||||||    
T  47548145 tccgctagataactatcggatgttcattttaaaaa 47548111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 25735379 - 25735308
Alignment:
Q  1 tccggtagataactatcggatgttcatttt--aaaaatttcgattttctacctc-gttagataactaccgaat 70  Q
    ||||||||||||||| | |||| |||||||  ||||||||| |||||||||||| || |||||||||||||||    
T  25735379 tccggtagataactagcagatgatcatttttaaaaaatttc-attttctacctctgtaagataactaccgaat 25735308  T

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Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 52
Target Start/End: Original strand, 34747196 - 34747244
Alignment:
Q  4 ggtagataactatcggatgttcattttaaaaatttcgattttctacctc 52  Q
    |||||||||||  | ||||||||| ||||||||||| ||||||||||||    
T  34747196 ggtagataactgccagatgttcatattaaaaatttccattttctacctc 34747244  T

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