View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3410_low_57 (Length: 235)
Name: NF3410_low_57
Description: NF3410
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3410_low_57 |
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Alignment Details
Target: chr7 (Bit Score: 199; Significance: 1e-108; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 42552434 - 42552220
Alignment:
| Q |
1 |
ccggttactccttccaataacgaacacagcaactgcaacggatcataattgataggcaaactttgaaaacttcatcaaatcgctaatctatagaattaga |
100 |
Q |
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| T |
42552434 |
ccggttactccttccaataacgaacacagcaactgcaactgatcataattgataggcaaactttgaaaacttcatcatatcgctaatctatagaattaga |
42552335 |
T |
|
| Q |
101 |
tcattataattgaaaacagtttgggacaatagcttaatcaaaatgaaagctagctctattgtatttagagatatatgcattattacaacttctgtgatca |
200 |
Q |
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||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
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| T |
42552334 |
tcattataattgaaaacagtttgtgacaatagcttaatcaaaatgaaagctagctctattgtatttagagatatatgcattactacaacttctgtgatca |
42552235 |
T |
|
| Q |
201 |
aattatagctagact |
215 |
Q |
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||||||||||||||| |
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| T |
42552234 |
aattatagctagact |
42552220 |
T |
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