View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3413_high_15 (Length: 258)
Name: NF3413_high_15
Description: NF3413
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3413_high_15 |
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Alignment Details
Target: chr3 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 18 - 250
Target Start/End: Original strand, 8362783 - 8363015
Alignment:
| Q |
18 |
catatagtatttgcagccaatcttgagatggatatcaattcccacaccttataactttcttccaacacagaacaggagtctgcaaatcaccatcaacagt |
117 |
Q |
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| T |
8362783 |
catatagtatttgcagccaatcttgagatggatatcaattcccacaccttataactttcttccaacatagaacaggagtctgcaaatcaccatcaacagt |
8362882 |
T |
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| Q |
118 |
taacggaaagtttaaaaatagttaaactggtnnnnnnnttcatcttttaagggaagactgtgtgtttcaaaacaaaagaagaggatattgtaatttacgg |
217 |
Q |
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| T |
8362883 |
taacggaaagtttaaaaatagttaaactggtaaaaaaattcatcttttaagggaagactgtgtgtttcaaaacaaaagaagaggatattgtaatttacgg |
8362982 |
T |
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| Q |
218 |
atctcttaaggatagttcttattttgatgatgt |
250 |
Q |
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||||||||||||||||||||||||||||||||| |
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| T |
8362983 |
atctcttaaggatagttcttattttgatgatgt |
8363015 |
T |
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