View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3413_high_22 (Length: 207)
Name: NF3413_high_22
Description: NF3413
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3413_high_22 |
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Alignment Details
Target: chr3 (Bit Score: 167; Significance: 1e-89; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 18 - 196
Target Start/End: Original strand, 35573995 - 35574173
Alignment:
| Q |
18 |
ctctccaccttccaagtccaacaccgctccatcatcgtcaccgccgccgtccggaacctatgtcatccagctccccaaggatcaaacctaccgcatccct |
117 |
Q |
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| T |
35573995 |
ctctccaccttccaagtccaacaccgttccatcatcgtcaccgccgccgtccggaacctatgtcatccagctccccaaggatcaaacctaccgcatccct |
35574094 |
T |
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| Q |
118 |
ccaccagaaaatgcacaacgttacgccaactacactcgccgcaaaagtcgccggtgcggatgctgttgctgtctctgct |
196 |
Q |
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|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
35574095 |
ccaccagagaatgcacaacgttacgccaactacactcgccgcaaaagtcgccggtgcggatgctgttgctgtctttgct |
35574173 |
T |
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