View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3414_high_15 (Length: 247)
Name: NF3414_high_15
Description: NF3414
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3414_high_15 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 26 - 247
Target Start/End: Complemental strand, 42225085 - 42224864
Alignment:
| Q |
26 |
aaaaaagtggctaagacattgtatgttagtatattttgttgatacaaaattcgtagtgtcctatcatcacctaattgaaacggagggggtattattttct |
125 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
42225085 |
aaaaaagtggctaagacattgtatgttagtatattttgttgacacaaaatttgtagtgtcctatcatcacctaattgaaacggagggagtattattttct |
42224986 |
T |
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| Q |
126 |
gatcacaattcaacatgtttttagcattttctcaaaaacaaaaacatatttttagcatgtgaaaattgataatatcctatcatcgaagtcccaccgaagt |
225 |
Q |
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||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42224985 |
gatcacaattcaacatgtttttagcatttcctcaaaaacaaaaacatatttttagcatgtgaaaattgataatatcctatcatcgaagtcccaccgaagt |
42224886 |
T |
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| Q |
226 |
aaatacacctttatattaacct |
247 |
Q |
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|||||||||||| ||||||||| |
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| T |
42224885 |
aaatacacctttctattaacct |
42224864 |
T |
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