View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3415_high_31 (Length: 265)
Name: NF3415_high_31
Description: NF3415
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3415_high_31 |
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Alignment Details
Target: chr7 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 11 - 249
Target Start/End: Complemental strand, 27640551 - 27640313
Alignment:
| Q |
11 |
cagagaccatagtagtccaagtaaacacattcctcaccttcatttcatcaaacagttcgcgagcttcatccaaacgacccacctgacaatacccaccaat |
110 |
Q |
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| T |
27640551 |
cagaaaccatagtagtccaagtaaacacattcctcaccttcatttcatcaaacagttcgcgagcttcatccaaacgacccacctgacaatacccaccaat |
27640452 |
T |
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| Q |
111 |
catattagtaaccaccacaacatccttctccggtatcatatcaaacagtttcttcgcatcatcaatacgcgattccttcaacaacccaccaatcataaca |
210 |
Q |
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| T |
27640451 |
catattagtaaccaccacaacatccttctccggtatcatatcaaacagtttcttcgcatcatcaatacgcgattccttcaacaacccaccaatcataaca |
27640352 |
T |
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| Q |
211 |
gtccacgacaccacattcctatgcggcatctcccaaaac |
249 |
Q |
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| T |
27640351 |
gtccacgacaccacattcctacgtggcatctcccaaaac |
27640313 |
T |
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