View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF3416_low_3 (Length: 382)
Name: NF3416_low_3
Description: NF3416
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3416_low_3 |
 | |
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| [»] chr8 (6 HSPs) |
| |
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| [»] chr4 (3 HSPs) |
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| [»] chr1 (13 HSPs) |
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| [»] chr5 (1 HSPs) |
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| [»] chr2 (7 HSPs) |
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| [»] chr6 (2 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 374; Significance: 0; HSPs: 6)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 374; E-Value: 0
Query Start/End: Original strand, 1 - 382
Target Start/End: Original strand, 4619162 - 4619543
Alignment:
| Q |
1 |
cctgtcaatcttggctagaagcttatcaaacttgacagcagtgtgggaggtgtggcaatgaagaacaggtgtatagccatctccaatctggccagggtga |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
4619162 |
cctgtcaatcttggctagaagcttatcaaacttgacagcagtgtgggaggtgtggcaatgaagaacaggtgtatagccatttccaatctggccagggtga |
4619261 |
T |
|
| Q |
101 |
ttcctgatgataacacatgagatgaagttatctgcctccttggctgggtcatgcttggagtttgagacaacatagcctcgcttgagatgctcagcagaca |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4619262 |
ttcctgatgataacacatgagatgaagttatctgcctccttggctgggtcatgcttggagtttgagacaacatagcctcgcttgagatgctcagcagaca |
4619361 |
T |
|
| Q |
201 |
cattctcaacattaaatcccacattgtcaccaggaagggcctcagtgagatttgtatggtgcatttgcacagactttacttcagcttgcagcccaatcgg |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4619362 |
cattctcaacattaaatcccacattgtcaccaggaagggcctcagtgagatttgtatggtccatttgcacagactttacttcagcttgcagcccaatcgg |
4619461 |
T |
|
| Q |
301 |
ggcaaaagtcaccatcattccaggtttcaagacaccggtctcaacacatcccacaggcacagttccaattcctccaatcttg |
382 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
4619462 |
ggcaaaagtcaccatcattccaggtttcaagacaccggtctcaacacatcccacaggcacagttccaattcctccaatcttg |
4619543 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 134 - 382
Target Start/End: Original strand, 1846095 - 1846343
Alignment:
| Q |
134 |
gcctccttggctgggtcatgcttggagtttgagacaacatagcctcgcttgagatgctcagcagacacattctcaacattaaatcccacattgtcaccag |
233 |
Q |
| |
|
|||||| | |||||| || ||| ||||| |||| |||||||||||||| |||||| || ||||||||||||| |||||||||||||||| ||||||||| |
|
|
| T |
1846095 |
gcctccatagctgggccacgctgggagtgtgaggcaacatagcctcgcctgagatccttagcagacacattcgtaacattaaatcccacaatgtcaccag |
1846194 |
T |
|
| Q |
234 |
gaagggcctcagtgagatttgtatggtgcatttgcacagactttacttcagcttgcagcccaatcggggcaaaagtcaccatcattccaggtttcaagac |
333 |
Q |
| |
|
|||| ||| |||||| | ||||||||| | ||||||||| ||||||| ||| |||||| | ||||||||||||| || ||||||||||||||||| |
|
|
| T |
1846195 |
gaagagcccgggtgagagcttcatggtgcatctccacagacttcacttcagtttggagcccagttggggcaaaagtcagcaccattccaggtttcaagat |
1846294 |
T |
|
| Q |
334 |
accggtctcaacacatcccacaggcacagttccaattcctccaatcttg |
382 |
Q |
| |
|
||| | |||||| | ||||||||||||| |||||||||||||||||||| |
|
|
| T |
1846295 |
accagactcaacgcgtcccacaggcacaattccaattcctccaatcttg |
1846343 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 27 - 235
Target Start/End: Original strand, 4296939 - 4297144
Alignment:
| Q |
27 |
caaacttgacagcagtgtgggaggtgtggcaatgaagaacaggtgtatagccatctccaatctggccagggtgattcctgatgataacacatgagatg-- |
124 |
Q |
| |
|
|||| ||||||| | |||||||||||||||| ||||||| |||||||||||| ||| ||||||||| ||||||||| |||||||| |||||||||| |
|
|
| T |
4296939 |
caaatttgacaggaatgtgggaggtgtggcagtgaagaataggtgtatagccttcttcaatctggctagggtgatttgtgatgata--acatgagatgta |
4297036 |
T |
|
| Q |
125 |
aagttatctgcctccttggctgggtcatgcttggagtttgagacaacatagcctcgcttgagatgctcagcagacacattctcaacattaaatcccacat |
224 |
Q |
| |
|
|||| | |||||||||||||||||| || || ||||||| ||||||||||| ||||||||| | |||||| ||||| |||||||||| |||| |
|
|
| T |
4297037 |
aagtgagtgacctccttggctgggtcatcctcggggtttgaggcaacatagccttgcttgagatccgtagcagaaacatt---gacattaaatctcacaa |
4297133 |
T |
|
| Q |
225 |
tgtcaccagga |
235 |
Q |
| |
|
||||||||||| |
|
|
| T |
4297134 |
tgtcaccagga |
4297144 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 19 - 292
Target Start/End: Complemental strand, 4788249 - 4787980
Alignment:
| Q |
19 |
aagcttatcaaacttgacagcagtgtgggaggtgtggcaatgaagaacaggtgtatagccatctccaatctggccagggtgattcctgatgataacacat |
118 |
Q |
| |
|
||||| |||||| | ||||||| | |||||||||||||| ||||||| ||| |||||||| | | ||||||| ||||||||||| |||||||| |||| |
|
|
| T |
4788249 |
aagctcatcaaattcgacagcaatttgggaggtgtggcagtgaagaataggcgtatagcctttttcaatctgtccagggtgatttgtgatgata--acat |
4788152 |
T |
|
| Q |
119 |
gagatg--aagttatctgcctccttggctgggtcatgcttggagtttgagacaacatagcctcgcttgagatgctcagcagacacattctcaacattaaa |
216 |
Q |
| |
|
|||||| |||| ||| ||||||||||| |||| | ||| |||| |||||||||||||| ||||||||| | |||||| || || |||||||| |
|
|
| T |
4788151 |
gagatgtaaagtaatcggcctccttggccacatcatccatggtgttttagacaacatagccttgcttgagatccatagcagaaac---gtcgacattaaa |
4788055 |
T |
|
| Q |
217 |
tcccacattgtcaccaggaagggcctcagtgagatttgtatggtgcatttgcacagactttacttcagcttgcagc |
292 |
Q |
| |
|
||||||| ||||||||||| |||| || ||||||| | ||||||| ||| ||| || ||||||||||||||| |
|
|
| T |
4788054 |
tcccacaatgtcaccaggataggccacatggagattt-cacggtgcatctgcgaagagttcacttcagcttgcagc |
4787980 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 268 - 378
Target Start/End: Original strand, 4297222 - 4297332
Alignment:
| Q |
268 |
cacagactttacttcagcttgcagcccaatcggggcaaaagtcaccatcattccaggtttcaagacaccggtctcaacacatcccacaggcacagttcca |
367 |
Q |
| |
|
|||||| || |||||||||||||||||| | |||||||||||||| ||||||||| |||| ||| ||||| |||| |||||||||||| || |
|
|
| T |
4297222 |
cacagatttgacttcagcttgcagcccagttggggcaaaagtcacagacattccagggcgcaagcaaccagtctcgacacggcccacaggcacatctctg |
4297321 |
T |
|
| Q |
368 |
attcctccaat |
378 |
Q |
| |
|
||||||||||| |
|
|
| T |
4297322 |
attcctccaat |
4297332 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 382
Target Start/End: Complemental strand, 4787932 - 4787836
Alignment:
| Q |
286 |
ttgcagcccaatcggggcaaaagtcaccatcattccaggtttcaagacaccggtctcaacacatcccacaggcacagttccaattcctccaatcttg |
382 |
Q |
| |
|
|||||||||| | |||||||||||||| ||||||||| |||| ||| ||||| |||| |||||||| |||| ||| ||||||||||||||| |
|
|
| T |
4787932 |
ttgcagcccagttggggcaaaagtcacagacattccagggcacaagcaaccagtctcgacacgtcccacagacacaactccgattcctccaatcttg |
4787836 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 154; Significance: 1e-81; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 1 - 382
Target Start/End: Original strand, 4230938 - 4231319
Alignment:
| Q |
1 |
cctgtcaatcttggctagaagcttatcaaacttgacagcagtgtgggaggtgtggcaatgaagaacaggtgtatagccatctccaatctggccagggtga |
100 |
Q |
| |
|
|||||||||||| | | ||||| | |||||||||| ||| |||||||||||||||| | ||||||||| | ||| |||| ||||||||||||||||||| |
|
|
| T |
4230938 |
cctgtcaatcttagtaacaagctcagcaaacttgactgcaatgtgggaggtgtggcagtcaagaacaggggcataaccatttccaatctggccagggtga |
4231037 |
T |
|
| Q |
101 |
ttcctgatgataacacatgagatg--aagttatctgcctccttggctgggtcatgcttggagtttgagacaacatagcctcgcttgagatgctcagcaga |
198 |
Q |
| |
|
||| |||| || ||| ||||||| |||||| | ||||||||||||||||||| ||||| ||||||| ||||||| || |||||||||| || |||| |
|
|
| T |
4231038 |
ttcatgataat--cacctgagatgtgaagttagcagcctccttggctgggtcatccttggtgtttgaggcaacataaccacgcttgagatccttgacaga |
4231135 |
T |
|
| Q |
199 |
cacattctcaacattaaatcccacattgtcaccaggaagggcctcagtgagatttgtatggtgcatttgcacagactttacttcagcttgcagcccaatc |
298 |
Q |
| |
|
||||||| |||||||||||||||||||||||| ||||| |||||||||||| | ||| ||||| | ||||||||| ||||||| |||||| ||| | |
|
|
| T |
4231136 |
aacattcttaacattaaatcccacattgtcaccgggaagtgcctcagtgagagattcatgatgcatctccacagacttgacttcagtttgcagtccagtt |
4231235 |
T |
|
| Q |
299 |
ggggcaaaagtcaccatcattccaggtttcaagacaccggtctcaacacatcccacaggcacagttccaattcctccaatcttg |
382 |
Q |
| |
|
|| ||||||||||||| |||||||||||||| | ||| |||||||||| ||||||||| |||||||||||||||||||||||| |
|
|
| T |
4231236 |
ggagcaaaagtcaccaccattccaggtttcatggtaccagtctcaacacgtcccacaggaacagttccaattcctccaatcttg |
4231319 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 28 - 236
Target Start/End: Complemental strand, 19965335 - 19965127
Alignment:
| Q |
28 |
aaacttgacagcagtgtgggaggtgtggcaatgaagaacaggtgtatagccatctccaatctggccagggtgattcctgatgataacacatgagatgaag |
127 |
Q |
| |
|
||||| ||||||| |||||||||||||||| | ||||||||||||||||||| | |||| |||||||| || | ||||||| | | || | ||| |
|
|
| T |
19965335 |
aaactcgacagcaatgtgggaggtgtggcagtcaagaacaggtgtatagccagtttgaatcatgccagggtcctttgtaatgataagataagatgtaaag |
19965236 |
T |
|
| Q |
128 |
ttatctgcctccttggctgggtcatgcttggagtttgagacaacatagcctcgcttgagatgctcagcagacacattctcaacattaaatcccacattgt |
227 |
Q |
| |
|
| | | ||| || |||||||||||| |||||||||||| ||||||| ||| ||| ||||| || ||||| |||| ||| |||| ||||||||| || |
|
|
| T |
19965235 |
tcagcggcccccatggctgggtcattgttggagtttgaggcaacataacctggctggagatccttagcagcaacatcctcgacatctaatcccacaaagt |
19965136 |
T |
|
| Q |
228 |
caccaggaa |
236 |
Q |
| |
|
||||||||| |
|
|
| T |
19965135 |
caccaggaa |
19965127 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 382
Target Start/End: Complemental strand, 19965074 - 19964978
Alignment:
| Q |
286 |
ttgcagcccaatcggggcaaaagtcaccatcattccaggtttcaagacaccggtctcaacacatcccacaggcacagttccaattcctccaatcttg |
382 |
Q |
| |
|
|||||||||| | ||||||||| ||| || ||| |||||| ||||| ||| ||| ||| || ||||||||||||| |||| |||||||||| |||| |
|
|
| T |
19965074 |
ttgcagcccagttggggcaaaattcatcaccatcccaggtgtcaagtaaccagtcacaatacgtcccacaggcacatttccgattcctccaaccttg |
19964978 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 148; Significance: 5e-78; HSPs: 13)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 27 - 382
Target Start/End: Original strand, 43044499 - 43044854
Alignment:
| Q |
27 |
caaacttgacagcagtgtgggaggtgtggcaatgaagaacaggtgtatagccatctccaatctggccagggtgattcctgatgataacacatgagatg-- |
124 |
Q |
| |
|
|||||||||||||| |||||||||||||||| | ||||||||| | |||||||| |||||||||||||||||||||| | ||||| ||| ||||||| |
|
|
| T |
43044499 |
caaacttgacagcaatgtgggaggtgtggcagtcaagaacaggggcatagccatttccaatctggccagggtgattcattatgat--cacttgagatgta |
43044596 |
T |
|
| Q |
125 |
aagttatctgcctccttggctgggtcatgcttggagtttgagacaacatagcctcgcttgagatgctcagcagacacattctcaacattaaatcccacat |
224 |
Q |
| |
|
|||||| | ||||||||||||||||||| ||||||||||||| ||||||| || |||||||||| || | ||| ||||||| |||||||||||||||| |
|
|
| T |
43044597 |
aagttagcagcctccttggctgggtcatccttggagtttgaggcaacatacccacgcttgagatccttaacagcaacattcttgacattaaatcccacat |
43044696 |
T |
|
| Q |
225 |
tgtcaccaggaagggcctcagtgagatttgtatggtgcatttgcacagactttacttcagcttgcagcccaatcggggcaaaagtcaccatcattccagg |
324 |
Q |
| |
|
||||||||||||||||||| |||||| | ||| ||||| | ||| ||||| ||||||| | ||| ||| | ||||||||||| || | ||||||||| |
|
|
| T |
43044697 |
tgtcaccaggaagggcctctgtgagagcttcatgatgcatctccacggacttgacttcagttgtcagtccagtaggggcaaaagtgacaaccattccagg |
43044796 |
T |
|
| Q |
325 |
tttcaagacaccggtctcaacacatcccacaggcacagttccaattcctccaatcttg |
382 |
Q |
| |
|
||| | |||||| ||||| |||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
43044797 |
ttttatgacaccagtctcgacacgccccacaggcacagttccaattcctccaatcttg |
43044854 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 27 - 382
Target Start/End: Complemental strand, 43067492 - 43067137
Alignment:
| Q |
27 |
caaacttgacagcagtgtgggaggtgtggcaatgaagaacaggtgtatagccatctccaatctggccagggtgattcctgatgataacacatgagatg-- |
124 |
Q |
| |
|
|||||||||||||| |||||||||||||||| | ||||||||| | |||||||| |||||||||||||||||||||| | ||||| ||| ||||||| |
|
|
| T |
43067492 |
caaacttgacagcaatgtgggaggtgtggcagtcaagaacaggggcatagccatttccaatctggccagggtgattcattatgat--cacttgagatgta |
43067395 |
T |
|
| Q |
125 |
aagttatctgcctccttggctgggtcatgcttggagtttgagacaacatagcctcgcttgagatgctcagcagacacattctcaacattaaatcccacat |
224 |
Q |
| |
|
|||||| | ||||||||||||||||||| ||||||||||||| ||||||| || |||||||||| || | ||| ||||||| |||||||||||||||| |
|
|
| T |
43067394 |
aagttagcagcctccttggctgggtcatccttggagtttgaggcaacatacccacgcttgagatccttaacagcaacattcttgacattaaatcccacat |
43067295 |
T |
|
| Q |
225 |
tgtcaccaggaagggcctcagtgagatttgtatggtgcatttgcacagactttacttcagcttgcagcccaatcggggcaaaagtcaccatcattccagg |
324 |
Q |
| |
|
||||||||||||||||||| |||||| | ||| ||||| | ||| ||||| ||||||| | ||| ||| | ||||||||||| || | ||||||||| |
|
|
| T |
43067294 |
tgtcaccaggaagggcctctgtgagagcttcatgatgcatctccacggacttgacttcagttgtcagtccagtaggggcaaaagtgacaaccattccagg |
43067195 |
T |
|
| Q |
325 |
tttcaagacaccggtctcaacacatcccacaggcacagttccaattcctccaatcttg |
382 |
Q |
| |
|
||| | |||||| ||||| |||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
43067194 |
ttttatgacaccagtctcgacacgccccacaggcacagttccaattcctccaatcttg |
43067137 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 27 - 382
Target Start/End: Original strand, 43083343 - 43083698
Alignment:
| Q |
27 |
caaacttgacagcagtgtgggaggtgtggcaatgaagaacaggtgtatagccatctccaatctggccagggtgattcctgatgataacacatgagatg-- |
124 |
Q |
| |
|
|||||||||||||| |||||||||||||||| | ||||||||| | |||||||| |||||||||||||||||||||| ||||||| ||| ||||||| |
|
|
| T |
43083343 |
caaacttgacagcaatgtgggaggtgtggcagtcaagaacaggggcatagccatttccaatctggccagggtgattcatgatgat--cacttgagatgta |
43083440 |
T |
|
| Q |
125 |
aagttatctgcctccttggctgggtcatgcttggagtttgagacaacatagcctcgcttgagatgctcagcagacacattctcaacattaaatcccacat |
224 |
Q |
| |
|
|||||| | || |||||||||||||||| ||||||||||||| ||||||| || |||||||||| || | ||| ||||||| |||||||||||||||| |
|
|
| T |
43083441 |
aagttagcagcttccttggctgggtcatccttggagtttgaggcaacatacccacgcttgagatccttaacagcaacattcttgacattaaatcccacat |
43083540 |
T |
|
| Q |
225 |
tgtcaccaggaagggcctcagtgagatttgtatggtgcatttgcacagactttacttcagcttgcagcccaatcggggcaaaagtcaccatcattccagg |
324 |
Q |
| |
|
||||||||||||||||||| |||||| | ||| ||||| | ||||||||| ||||||| | ||| ||| | ||||||||||| | | ||||||||| |
|
|
| T |
43083541 |
tgtcaccaggaagggcctctgtgagagcttcatgatgcatctccacagacttgacttcagttgtcagtccagtaggggcaaaagtgataaccattccagg |
43083640 |
T |
|
| Q |
325 |
tttcaagacaccggtctcaacacatcccacaggcacagttccaattcctccaatcttg |
382 |
Q |
| |
|
||| | |||||| ||||| |||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
43083641 |
ttttatgacaccagtctcgacacgccccacaggcacagttccaattcctccaatcttg |
43083698 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 27 - 382
Target Start/End: Complemental strand, 7891733 - 7891378
Alignment:
| Q |
27 |
caaacttgacagcagtgtgggaggtgtggcaatgaagaacaggtgtatagccatctccaatctggccagggtgattcctgatgataacacatgagatg-- |
124 |
Q |
| |
|
|||||||||||||| |||||||||||||||| | |||| |||||||||||||| || |||||||||||| |||||| |||||||||| ||||||| |
|
|
| T |
7891733 |
caaacttgacagcaatgtgggaggtgtggcagtcgagaataggtgtatagccatttctaatctggccaggatgattcaagatgataaca--tgagatgta |
7891636 |
T |
|
| Q |
125 |
aagttatctgcctccttggctgggtcatgcttggagtttgagacaacatagcctcgcttgagatgctcagcagacacattctcaacattaaatcccacat |
224 |
Q |
| |
|
|| | | | |||||| | |||||| || |||||||||||||| |||||||||||||| |||||| || ||||||||||||| ||| |||||||||||| |
|
|
| T |
7891635 |
aattcagcagcctccatagctgggccacgcttggagtttgaggcaacatagcctcgcctgagatccttagcagacacattcgtaacgttaaatcccacaa |
7891536 |
T |
|
| Q |
225 |
tgtcaccaggaagggcctcagtgagatttgtatggtgcatttgcacagactttacttcagcttgcagcccaatcggggcaaaagtcaccatcattccagg |
324 |
Q |
| |
|
||||||||||||| ||| ||||||| | ||||||||| | ||||||||| ||||||| ||| |||||| | ||||||||||||| || ||||||||| |
|
|
| T |
7891535 |
tgtcaccaggaagagcccgagtgagagcttcatggtgcatctccacagacttcacttcagtttggagcccagttggggcaaaagtcagcaccattccagg |
7891436 |
T |
|
| Q |
325 |
tttcaagacaccggtctcaacacatcccacaggcacagttccaattcctccaatcttg |
382 |
Q |
| |
|
|||||||| ||| | |||||| | ||||||||||||| |||||||||||||||||||| |
|
|
| T |
7891435 |
tttcaagataccagactcaacgcgtcccacaggcacaattccaattcctccaatcttg |
7891378 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 1 - 382
Target Start/End: Original strand, 3300207 - 3300588
Alignment:
| Q |
1 |
cctgtcaatcttggctagaagcttatcaaacttgacagcagtgtgggaggtgtggcaatgaagaacaggtgtatagccatctccaatctggccagggtga |
100 |
Q |
| |
|
|||||||||||| | | ||||| | |||| ||||||||| |||||||||||||||| | ||||||||| | |||||||| ||||||||||||||||||| |
|
|
| T |
3300207 |
cctgtcaatcttagtaacaagctcagcaaatttgacagcaatgtgggaggtgtggcagtcaagaacaggggcatagccatttccaatctggccagggtga |
3300306 |
T |
|
| Q |
101 |
ttcctgatgataacacatgagatg--aagttatctgcctccttggctgggtcatgcttggagtttgagacaacatagcctcgcttgagatgctcagcaga |
198 |
Q |
| |
|
||| | ||||| ||| ||||||| |||||| | ||||||||||| ||||||| ||||||||||||| ||||||| || |||||||||| || | ||| |
|
|
| T |
3300307 |
ttcataatgat--cacttgagatgtaaagttagcagcctccttggcagggtcatccttggagtttgaggcaacataaccacgcttgagatccttaacagc |
3300404 |
T |
|
| Q |
199 |
cacattctcaacattaaatcccacattgtcaccaggaagggcctcagtgagatttgtatggtgcatttgcacagactttacttcagcttgcagcccaatc |
298 |
Q |
| |
|
|| |||| |||||||||||||||||||||||||||||| |||||||||||| | ||| ||||| | ||||||||| ||||||| | ||| ||| | |
|
|
| T |
3300405 |
aacgttcttaacattaaatcccacattgtcaccaggaagagcctcagtgagagcttcatgatgcatctccacagacttcacttcagttgtcagtccagta |
3300504 |
T |
|
| Q |
299 |
ggggcaaaagtcaccatcattccaggtttcaagacaccggtctcaacacatcccacaggcacagttccaattcctccaatcttg |
382 |
Q |
| |
|
||||||||||| || | |||||||||||| | |||||| ||||| |||| |||||||||||||| |||||||||||||||||| |
|
|
| T |
3300505 |
ggggcaaaagtgacaaccattccaggttttatgacaccagtctcgacacgccccacaggcacagtcccaattcctccaatcttg |
3300588 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 1 - 382
Target Start/End: Complemental strand, 38138667 - 38138286
Alignment:
| Q |
1 |
cctgtcaatcttggctagaagcttatcaaacttgacagcagtgtgggaggtgtggcaatgaagaacaggtgtatagccatctccaatctggccagggtga |
100 |
Q |
| |
|
|||||||| ||||| | ||||||| |||||||||||| | ||||||||||||||| | |||| |||||||||||||| | |||| |||||| ||| |
|
|
| T |
38138667 |
cctgtcaaacttggtaacaagcttagcaaacttgacaggaacgtgggaggtgtggcagtccagaataggtgtatagccattttgaatccggccagtttga |
38138568 |
T |
|
| Q |
101 |
ttcctgatgataacacatgagatgaagttatctgcctccttggctgggtcatgcttggagtttgagacaacatagcctcgcttgagatgctcagcagaca |
200 |
Q |
| |
|
||| |||||||||||| || | || ||| | |||||| ||||||||||||||||||||| |||| |||||||||||||| ||||| || | ||||| |
|
|
| T |
38138567 |
ttcgtgatgataacacgggatgtaaatttagcagcctccgtggctgggtcatgcttggagtctgaggcaacatagcctcgccggagatccttaacagacc |
38138468 |
T |
|
| Q |
201 |
cattctcaacattaaatcccacattgtcaccaggaagggcctcagtgagatttgtatggtgcatttgcacagactttacttcagcttgcagcccaatcgg |
300 |
Q |
| |
|
||| || |||||||||||||||| |||||||||||||||||||| |||| ||| ||||||||| | || ||| || || || || ||||||| | || |
|
|
| T |
38138467 |
catgctgaacattaaatcccacaatgtcaccaggaagggcctcattgagcttttcatggtgcatctccatagaattcacaagagttttcagcccagttgg |
38138368 |
T |
|
| Q |
301 |
ggcaaaagtcaccatcattccaggtttcaagacaccggtctcaacacatcccacaggcacagttccaattcctccaatcttg |
382 |
Q |
| |
|
||||||||||||| |||||| ||||||||||||||| ||||||| | |||||||||||||||||||||||||||||||||| |
|
|
| T |
38138367 |
ggcaaaagtcaccgccattcctggtttcaagacaccgctctcaacccgtcccacaggcacagttccaattcctccaatcttg |
38138286 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 1 - 382
Target Start/End: Complemental strand, 45984500 - 45984122
Alignment:
| Q |
1 |
cctgtcaatcttggctagaagcttatcaaacttgacagcagtgtgggaggtgtggcaatgaagaacaggtgtatagccatctccaatctggccagggtga |
100 |
Q |
| |
|
|||||||| ||||| | ||||| | |||||||||||||| |||||||||||||||| | |||||||||||| ||||||| || |||||||||||||||| |
|
|
| T |
45984500 |
cctgtcaaccttggaaataagctcagcaaacttgacagcaatgtgggaggtgtggcagtcaagaacaggtgtgtagccatttcgaatctggccagggtga |
45984401 |
T |
|
| Q |
101 |
ttcctgatgataacacatgagatgaagttatctgcctccttggctgggtcatgcttggagtttgagacaacatagcctcgcttgagatgctcagcagaca |
200 |
Q |
| |
|
||| | ||||||||| || | |||| | | ||||| ||||||||| || |||||||||| ||||||| ||| ||||||||| | ||||| | |
|
|
| T |
45984400 |
ttcgtaatgataacaagagatgtaaagtgagcggcctctaccgctgggtcaccctcggagtttgaggcaacataaccttgcttgagatccctagcagcaa |
45984301 |
T |
|
| Q |
201 |
cattctcaacattaaatcccacattgtcaccaggaagggcctcagtgagatttgtatggtgcatttgcacagactttacttcagcttgcagcccaatcgg |
300 |
Q |
| |
|
| || |||||||||||||||| |||||||||||||||||||| || | | ||||||||| | ||||||||| |||||||||||||||||| | | |
|
|
| T |
45984300 |
cgtt---aacattaaatcccacaatgtcaccaggaagggcctcaccgatagcttcatggtgcatctccacagacttcacttcagcttgcagcccagttgc |
45984204 |
T |
|
| Q |
301 |
ggcaaaagtcaccatcattccaggtttcaagacaccggtctcaacacatcccacaggcacagttccaattcctccaatcttg |
382 |
Q |
| |
|
||||||||||| || ||||||||| |||||| ||| |||||||||| |||||||||||||||||| ||||||||||||||| |
|
|
| T |
45984203 |
ggcaaaagtcagcaccattccagggttcaaggaaccagtctcaacacgtcccacaggcacagttccgattcctccaatcttg |
45984122 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 141 - 379
Target Start/End: Complemental strand, 40035360 - 40035122
Alignment:
| Q |
141 |
tggctgggtcatgcttggagtttgagacaacatagcctcgcttgagatgctcagcagacacattctcaacattaaatcccacattgtcaccaggaagggc |
240 |
Q |
| |
|
||||||| |||| |||||||||||| ||||||| ||| ||||||||| || | |||||| |||| |||||||||||||||| |||||||||||||||| |
|
|
| T |
40035360 |
tggctggatcatcgttggagtttgaggcaacataaccttgcttgagatccttaacagacatgttcttaacattaaatcccacaatgtcaccaggaagggc |
40035261 |
T |
|
| Q |
241 |
ctcagtgagatttgtatggtgcatttgcacagactttacttcagcttgcagcccaatcggggcaaaagtcaccatcattccaggtttcaagacaccggtc |
340 |
Q |
| |
|
||| ||||| | |||||||| | ||||||| | ||||||| ||||| |||| | |||||||||||||| |||||| |||||||||||||| ||| |
|
|
| T |
40035260 |
ctcgatgagaccttcgtggtgcatctccacagacctcacttcagtttgcaccccagttggggcaaaagtcacagccattcctggtttcaagacaccagtc |
40035161 |
T |
|
| Q |
341 |
tcaacacatcccacaggcacagttccaattcctccaatc |
379 |
Q |
| |
|
||||| || |||||||| |||||||||||||||| |
|
|
| T |
40035160 |
ataacacgaccaacaggcacgactccaattcctccaatc |
40035122 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 5 - 223
Target Start/End: Complemental strand, 43077391 - 43077173
Alignment:
| Q |
5 |
tcaatcttggctagaagcttatcaaacttgacagcagtgtgggaggtgtggcaatgaagaacaggtgtatagccatctccaatctggccagggtgattcc |
104 |
Q |
| |
|
|||||||||| | ||||| ||||||||||||| | ||||| |||||||||| ||||||||||||| |||||||| | |||||| ||||||||||||| |
|
|
| T |
43077391 |
tcaatcttggtaacaagctcatcaaacttgacaagaatgtggaaggtgtggcagtgaagaacaggtgcatagccattttcaatcttgccagggtgattca |
43077292 |
T |
|
| Q |
105 |
tgatgataacacatgagatg--aagttatctgcctccttggctgggtcatgcttggagtttgagacaacatagcctcgcttgagatgctcagcagacaca |
202 |
Q |
| |
|
||| | | || ||||||| |||||| | ||||||||||||||||||| | ||||||| ||| |||||||||| | |||||||| || | || || |
|
|
| T |
43077291 |
tgacg--acgacttgagatgtaaagttagcggcctccttggctgggtcatccatggagttagaggcaacatagccactcttgagatccttaacatcaacg |
43077194 |
T |
|
| Q |
203 |
ttctcaacattaaatcccaca |
223 |
Q |
| |
|
|||||||||||||||| |||| |
|
|
| T |
43077193 |
ttctcaacattaaatctcaca |
43077173 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 299 - 374
Target Start/End: Complemental strand, 43077067 - 43076992
Alignment:
| Q |
299 |
ggggcaaaagtcaccatcattccaggtttcaagacaccggtctcaacacatcccacaggcacagttccaattcctc |
374 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||| |||||||||| | ||||||| |||||||||||||||| |
|
|
| T |
43077067 |
ggggcaaaagtcaccaccattccaggtttcaagacaccagtctcaacacgtgccacaggtacagttccaattcctc |
43076992 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 299 - 382
Target Start/End: Original strand, 50912150 - 50912233
Alignment:
| Q |
299 |
ggggcaaaagtcaccatcattccaggtttcaagacaccggtctcaacacatcccacaggcacagttccaattcctccaatcttg |
382 |
Q |
| |
|
|||||||||||||||| ||||||| ||||||||||||||||||||| || ||||||||| ||| |||||||| ||||||||||| |
|
|
| T |
50912150 |
ggggcaaaagtcaccaccattccacgtttcaagacaccggtctcaatacgtcccacaggtacaattccaatttctccaatcttg |
50912233 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 145 - 250
Target Start/End: Original strand, 50912034 - 50912139
Alignment:
| Q |
145 |
tgggtcatgcttggagtttgagacaacatagcctcgcttgagatgctcagcagacacattctcaacattaaatcccacattgtcaccaggaagggcctca |
244 |
Q |
| |
|
|||||||| |||||||||||| ||| |||||||||| ||||| || || ||||||||||| |||||||||||||||| |||||||||||| ||||||| |
|
|
| T |
50912034 |
tgggtcatcgttggagtttgaggcaatatagcctcgccggagatccttagaagacacattcttaacattaaatcccacaatgtcaccaggaatggcctca |
50912133 |
T |
|
| Q |
245 |
gtgaga |
250 |
Q |
| |
|
||||| |
|
|
| T |
50912134 |
atgaga |
50912139 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 50911932 - 50911984
Alignment:
| Q |
19 |
aagcttatcaaacttgacagcagtgtgggaggtgtggcaatgaagaacaggtg |
71 |
Q |
| |
|
||||||| |||||||||||||| ||| ||| |||||||||||||||||||||| |
|
|
| T |
50911932 |
aagcttagcaaacttgacagcaatgttggacgtgtggcaatgaagaacaggtg |
50911984 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 134; Significance: 1e-69; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 1 - 382
Target Start/End: Original strand, 16348620 - 16349001
Alignment:
| Q |
1 |
cctgtcaatcttggctagaagcttatcaaacttgacagcagtgtgggaggtgtggcaatgaagaacaggtgtatagccatctccaatctggccagggtga |
100 |
Q |
| |
|
|||||| | |||||| ||||||||| |||||||||||||| ||| |||||||||||| | ||||||||||||||| || | | |||| |||||||||||| |
|
|
| T |
16348620 |
cctgtctaccttggcaagaagcttagcaaacttgacagcaatgtaggaggtgtggcagttaagaacaggtgtataacccttttcaatttggccagggtga |
16348719 |
T |
|
| Q |
101 |
ttcctgatgataacacatgagatg--aagttatctgcctccttggctgggtcatgcttggagtttgagacaacatagcctcgcttgagatgctcagcaga |
198 |
Q |
| |
|
||| |||||||||| ||||||| |||||| |||||||||||||||| |||||||||||||||| ||||||||||||| ||||||| || |||| |
|
|
| T |
16348720 |
ttcgtgatgataact--tgagatgtaaagttaatggcctccttggctgggtgatgcttggagtttgaggcaacatagcctcggctgagatgtgcatcaga |
16348817 |
T |
|
| Q |
199 |
cacattctcaacattaaatcccacattgtcaccaggaagggcctcagtgagatttgtatggtgcatttgcacagactttacttcagcttgcagcccaatc |
298 |
Q |
| |
|
||||||||||||| ||||| |||||| ||||||||||||||||| | |||| | ||||| ||| | ||||||| | || ||| ||||| | ||| | |
|
|
| T |
16348818 |
cacattctcaacagcaaatctcacattatcaccaggaagggcctcggaaagatcttcatggtccatcttcacagacgtcacctcaccttgccggccattt |
16348917 |
T |
|
| Q |
299 |
ggggcaaaagtcaccatcattccaggtttcaagacaccggtctcaacacatcccacaggcacagttccaattcctccaatcttg |
382 |
Q |
| |
|
|||| ||||||||||| ||||||||||||||||||||| ||| |||||||| ||| || || ||||||||||||||||||| |
|
|
| T |
16348918 |
ggggaaaaagtcaccaccattccaggtttcaagacaccagtcctgacacatcctgcagccaaagctccaattcctccaatcttg |
16349001 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 76; Significance: 5e-35; HSPs: 7)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 215 - 382
Target Start/End: Original strand, 34690533 - 34690700
Alignment:
| Q |
215 |
aatcccacattgtcaccaggaagggcctcagtgagatttgtatggtgcatttgcacagactttacttcagcttgcagcccaatcggggcaaaagtcacca |
314 |
Q |
| |
|
||||||||| | |||||||||||||||||| ||| ||| ||| ||||| ||||||||||| ||| ||| |||||||||| | ||||||||||||| || |
|
|
| T |
34690533 |
aatcccacaatatcaccaggaagggcctcactgatgttttcatgatgcatctgcacagacttaactccagattgcagcccagttggggcaaaagtcagca |
34690632 |
T |
|
| Q |
315 |
tcattccaggtttcaagacaccggtctcaacacatcccacaggcacagttccaattcctccaatcttg |
382 |
Q |
| |
|
||||||||||||||| ||||| |||||||||| ||| ||||| |||||||||| |||||||||||| |
|
|
| T |
34690633 |
ccattccaggtttcaacacaccagtctcaacacgtccgacaggtacagttccaacacctccaatcttg |
34690700 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 215 - 382
Target Start/End: Original strand, 34712945 - 34713112
Alignment:
| Q |
215 |
aatcccacattgtcaccaggaagggcctcagtgagatttgtatggtgcatttgcacagactttacttcagcttgcagcccaatcggggcaaaagtcacca |
314 |
Q |
| |
|
||||||||| | |||||||||||||||||| ||| ||| ||| ||||| ||||||||||| ||| ||| |||||||||| | ||||||||||||| || |
|
|
| T |
34712945 |
aatcccacaatatcaccaggaagggcctcactgatgttttcatgatgcatctgcacagacttaactccagattgcagcccagttggggcaaaagtcagca |
34713044 |
T |
|
| Q |
315 |
tcattccaggtttcaagacaccggtctcaacacatcccacaggcacagttccaattcctccaatcttg |
382 |
Q |
| |
|
||||||||||||||| ||||| |||||||||| ||| ||||| |||||||||| |||||||||||| |
|
|
| T |
34713045 |
ccattccaggtttcaacacaccagtctcaacacgtccgacaggtacagttccaacacctccaatcttg |
34713112 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 266 - 381
Target Start/End: Original strand, 33860572 - 33860687
Alignment:
| Q |
266 |
tgcacagactttacttcagcttgcagcccaatcggggcaaaagtcaccatcattccaggtttcaagacaccggtctcaacacatcccacaggcacagttc |
365 |
Q |
| |
|
|||||||||| ||| || ||||||||||| | ||||||||||||||| |||||||||||||||| ||| ||| |||||| ||| ||| ||||| ||| |
|
|
| T |
33860572 |
tgcacagactcgactacatcttgcagcccagttggggcaaaagtcaccgccattccaggtttcaagtgaccagtcacaacacgtcctacatgcacatttc |
33860671 |
T |
|
| Q |
366 |
caattcctccaatctt |
381 |
Q |
| |
|
| |||||||||||||| |
|
|
| T |
33860672 |
cgattcctccaatctt |
33860687 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 299 - 382
Target Start/End: Original strand, 16231958 - 16232041
Alignment:
| Q |
299 |
ggggcaaaagtcaccatcattccaggtttcaagacaccggtctcaacacatcccacaggcacagttccaattcctccaatcttg |
382 |
Q |
| |
|
||||||||||||| | |||||| || || || || || |||||||||| ||||||||| ||||||||||| |||||||||||| |
|
|
| T |
16231958 |
ggggcaaaagtcagtaccattccgggctttaataccccagtctcaacacgtcccacaggtacagttccaatacctccaatcttg |
16232041 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 114
Target Start/End: Original strand, 33860310 - 33860420
Alignment:
| Q |
4 |
gtcaatcttggctagaagcttatcaaacttgacagcagtgtgggaggtgtggcaatgaagaacaggtgtatagccatctccaatctggccagggtgattc |
103 |
Q |
| |
|
||||| |||||| | ||||| | ||||| |||||||| ||||||||||||||| | ||||| ||||||| |||| | || |||| ||||||||| ||| |
|
|
| T |
33860310 |
gtcaaccttggcaataagctcaacaaacatgacagcaacgtgggaggtgtggcagtcaagaataggtgtaaagccttttctaatcaggccagggtcattt |
33860409 |
T |
|
| Q |
104 |
ctgatgataac |
114 |
Q |
| |
|
|||||||||| |
|
|
| T |
33860410 |
gtgatgataac |
33860420 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 75
Target Start/End: Original strand, 34690331 - 34690387
Alignment:
| Q |
19 |
aagcttatcaaacttgacagcagtgtgggaggtgtggcaatgaagaacaggtgtata |
75 |
Q |
| |
|
||||||| |||||||||||||||||||||||| |||||| | ||| ||||| ||||| |
|
|
| T |
34690331 |
aagcttagcaaacttgacagcagtgtgggaggcgtggcagtcaaggacaggagtata |
34690387 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 75
Target Start/End: Original strand, 34712743 - 34712799
Alignment:
| Q |
19 |
aagcttatcaaacttgacagcagtgtgggaggtgtggcaatgaagaacaggtgtata |
75 |
Q |
| |
|
||||||| |||||||||||||||||||||||| |||||| | ||| ||||| ||||| |
|
|
| T |
34712743 |
aagcttagcaaacttgacagcagtgtgggaggcgtggcagtcaaggacaggagtata |
34712799 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 382
Target Start/End: Complemental strand, 7530066 - 7529685
Alignment:
| Q |
1 |
cctgtcaatcttggctagaagcttatcaaacttgacagcagtgtgggaggtgtggcaatgaagaacaggtgtatagccatctccaatctggccagggtga |
100 |
Q |
| |
|
|||||||||||||| | ||| | | ||||||| |||||| |||| ||||||||||||| || || |||| ||| |||| ||||||||| |||||||| |
|
|
| T |
7530066 |
cctgtcaatcttggtaacaagttcagcaaacttcacagcaatgtgagaggtgtggcaatcgagcactggtgcatatccatttccaatctgtccagggtgg |
7529967 |
T |
|
| Q |
101 |
ttcctgatgataacacatgagatgaagttatctgcctccttggctgggtcatgcttggagtttgagacaacatagcctcgcttgagatgctcagcagaca |
200 |
Q |
| |
|
||| ||||||| || || ||||||| | || ||||| || ||||||| ||||||||| || |||| | || |||||||||| || ||| | |
|
|
| T |
7529966 |
ttcatgatgatgacttgggaagtgaagttggcagcttcctttgcagggtcatccttggagttggatgcaacgaaaccacgcttgagatccttcacagcaa |
7529867 |
T |
|
| Q |
201 |
cattctcaacattaaatcccacattgtcaccaggaagggcctcagtgagatttgtatggtgcatttgcacagactttacttcagcttgcagcccaatcgg |
300 |
Q |
| |
|
|||||| |||||| ||||| |||||||| || ||||| || ||||||||| |||||||| | |||||||| ||||||| | || ||| | || |
|
|
| T |
7529866 |
cattcttaacattgaatccgacattgtctcctggaagagcttcagtgagagcctcgtggtgcatctcaacagacttaacttcagttgttagaccagtggg |
7529767 |
T |
|
| Q |
301 |
ggcaaaagtcaccatcattccaggtttcaagacaccggtctcaacacatcccacaggcacagttccaattcctccaatcttg |
382 |
Q |
| |
|
|||||||||| | ||| || || |||| | |||||||||||||| ||| || |||||||||||||| || ||||||||| |
|
|
| T |
7529766 |
tccaaaagtcacaaccataccgggcttcacaataccggtctcaacacgtccgactggcacagttccaataccaccaatcttg |
7529685 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 382
Target Start/End: Complemental strand, 7520529 - 7520148
Alignment:
| Q |
1 |
cctgtcaatcttggctagaagcttatcaaacttgacagcagtgtgggaggtgtggcaatgaagaacaggtgtatagccatctccaatctggccagggtga |
100 |
Q |
| |
|
|||||||||||||| | ||| | | ||||||| |||||| |||| ||||||||||||| || || |||| ||| |||| ||||||||| |||||||| |
|
|
| T |
7520529 |
cctgtcaatcttggtaacaagttcagcaaacttcacagcaatgtgagaggtgtggcaatcgagcactggtgcatatccatttccaatctgtccagggtgg |
7520430 |
T |
|
| Q |
101 |
ttcctgatgataacacatgagatgaagttatctgcctccttggctgggtcatgcttggagtttgagacaacatagcctcgcttgagatgctcagcagaca |
200 |
Q |
| |
|
||| ||||||| || || ||||||| | || ||||| || ||||||| ||||||||| || |||| | || |||||||||| || | | | |
|
|
| T |
7520429 |
ttcatgatgatgacttgggaagtgaagttggcagcttcctttgcagggtcatccttggagttggatgcaacgaaaccacgcttgagatccttcacggcaa |
7520330 |
T |
|
| Q |
201 |
cattctcaacattaaatcccacattgtcaccaggaagggcctcagtgagatttgtatggtgcatttgcacagactttacttcagcttgcagcccaatcgg |
300 |
Q |
| |
|
|||||| |||||| ||||| |||||||| || ||||| || ||||||||| |||||||| | |||||||| ||||||| | || ||| | || |
|
|
| T |
7520329 |
cattcttaacattgaatccaacattgtctcctggaagagcttcagtgagagcctcgtggtgcatctcaacagacttaacttcagttgtcaaaccagtggg |
7520230 |
T |
|
| Q |
301 |
ggcaaaagtcaccatcattccaggtttcaagacaccggtctcaacacatcccacaggcacagttccaattcctccaatcttg |
382 |
Q |
| |
|
|||||||||| | ||| || || |||| | |||||||||||||| ||| || |||||||||||||| || ||||||||| |
|
|
| T |
7520229 |
tccaaaagtcacaaccataccgggcttcacaataccggtctcaacacgtccaactggcacagttccaataccaccaatcttg |
7520148 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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