View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3417_low_9 (Length: 252)

Name: NF3417_low_9
Description: NF3417
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3417_low_9
NF3417_low_9
[»] chr4 (55 HSPs)
chr4 (12-232)||(35645819-35646039)
chr4 (12-157)||(35655322-35655467)
chr4 (13-98)||(35676449-35676534)
chr4 (172-232)||(31254461-31254521)
chr4 (172-232)||(28245580-28245640)
chr4 (172-232)||(50543384-50543444)
chr4 (172-232)||(50543621-50543681)
chr4 (167-230)||(9279192-9279255)
chr4 (172-232)||(11036800-11036860)
chr4 (172-232)||(13555521-13555581)
chr4 (172-232)||(27634135-27634195)
chr4 (172-232)||(39902617-39902677)
chr4 (173-232)||(22827509-22827568)
chr4 (166-232)||(27634570-27634636)
chr4 (172-224)||(17111738-17111790)
chr4 (172-232)||(35788629-35788689)
chr4 (172-232)||(35788864-35788924)
chr4 (173-232)||(44118913-44118972)
chr4 (172-218)||(42662433-42662479)
chr4 (172-232)||(400619-400679)
chr4 (172-232)||(5846116-5846176)
chr4 (172-232)||(21498324-21498384)
chr4 (172-232)||(21498765-21498825)
chr4 (172-232)||(22231127-22231187)
chr4 (172-232)||(22863444-22863504)
chr4 (172-232)||(53828343-53828403)
chr4 (173-232)||(53698998-53699057)
chr4 (12-87)||(35672949-35673026)
chr4 (172-229)||(20821943-20822000)
chr4 (167-232)||(53828577-53828642)
chr4 (172-232)||(5846349-5846409)
chr4 (172-232)||(9685602-9685662)
chr4 (172-224)||(13611811-13611863)
chr4 (172-232)||(22845501-22845561)
chr4 (172-232)||(35796796-35796856)
chr4 (172-232)||(35819182-35819242)
chr4 (172-232)||(37836050-37836110)
chr4 (172-232)||(53814983-53815043)
chr4 (172-223)||(21684968-21685019)
chr4 (172-230)||(6218409-6218467)
chr4 (172-230)||(11036567-11036625)
chr4 (202-232)||(28246139-28246169)
chr4 (172-230)||(45784934-45784992)
chr4 (175-232)||(1518137-1518194)
chr4 (173-230)||(6218175-6218232)
chr4 (196-229)||(7892542-7892575)
chr4 (201-230)||(52559566-52559595)
chr4 (172-229)||(54054862-54054919)
chr4 (172-232)||(980104-980164)
chr4 (172-224)||(5398273-5398325)
chr4 (173-229)||(6835145-6835201)
chr4 (172-232)||(13555301-13555361)
chr4 (172-232)||(18528271-18528331)
chr4 (172-232)||(35797031-35797091)
chr4 (172-232)||(54055086-54055146)
[»] chr1 (64 HSPs)
chr1 (172-230)||(25713363-25713421)
chr1 (172-233)||(2859445-2859506)
chr1 (172-233)||(35772234-35772295)
chr1 (172-232)||(8870743-8870803)
chr1 (172-232)||(20208580-20208640)
chr1 (172-232)||(25145539-25145599)
chr1 (172-232)||(51459884-51459944)
chr1 (172-230)||(38668330-38668388)
chr1 (172-232)||(2859681-2859741)
chr1 (173-233)||(7826084-7826144)
chr1 (172-232)||(38733352-38733412)
chr1 (172-232)||(39808436-39808496)
chr1 (172-232)||(52961552-52961612)
chr1 (173-232)||(17468315-17468374)
chr1 (172-223)||(38733122-38733173)
chr1 (172-230)||(16163137-16163195)
chr1 (172-229)||(26173513-26173570)
chr1 (175-232)||(52650825-52650882)
chr1 (172-232)||(4098217-4098277)
chr1 (172-232)||(15986387-15986447)
chr1 (176-232)||(27413556-27413612)
chr1 (175-230)||(17402555-17402610)
chr1 (173-232)||(39348173-39348232)
chr1 (172-231)||(51459760-51459819)
chr1 (172-230)||(3169736-3169794)
chr1 (174-232)||(40079124-40079182)
chr1 (167-232)||(4113060-4113125)
chr1 (172-225)||(11924891-11924944)
chr1 (172-221)||(51460147-51460196)
chr1 (172-232)||(369605-369665)
chr1 (173-233)||(3477229-3477289)
chr1 (172-232)||(12245016-12245076)
chr1 (172-232)||(25145774-25145834)
chr1 (182-230)||(40524707-40524755)
chr1 (172-232)||(51588962-51589022)
chr1 (172-232)||(51589196-51589256)
chr1 (172-231)||(17412306-17412365)
chr1 (172-219)||(33156939-33156986)
chr1 (172-230)||(17452884-17452942)
chr1 (172-218)||(26603398-26603444)
chr1 (172-225)||(4112832-4112885)
chr1 (172-233)||(28408095-28408156)
chr1 (172-229)||(35892261-35892318)
chr1 (167-224)||(38080570-38080627)
chr1 (172-232)||(4098456-4098516)
chr1 (172-224)||(16162903-16162955)
chr1 (172-232)||(26176878-26176938)
chr1 (172-232)||(26177113-26177173)
chr1 (172-232)||(30369805-30369865)
chr1 (173-232)||(21626393-21626452)
chr1 (172-233)||(3169970-3170032)
chr1 (172-230)||(4112596-4112654)
chr1 (200-230)||(26173280-26173310)
chr1 (172-230)||(51460263-51460321)
chr1 (177-230)||(9499221-9499274)
chr1 (172-233)||(32952041-32952102)
chr1 (172-232)||(855951-856011)
chr1 (196-232)||(17402708-17402744)
chr1 (176-232)||(17452733-17452789)
chr1 (172-232)||(25137357-25137417)
chr1 (202-230)||(38668125-38668153)
chr1 (172-232)||(41035881-41035941)
chr1 (172-224)||(42586500-42586552)
chr1 (172-224)||(43409777-43409829)
[»] chr5 (56 HSPs)
chr5 (175-232)||(15480295-15480352)
chr5 (172-232)||(2063787-2063847)
chr5 (172-232)||(18333519-18333579)
chr5 (172-232)||(20510696-20510756)
chr5 (173-232)||(1564621-1564680)
chr5 (172-230)||(33337294-33337352)
chr5 (184-230)||(37782106-37782152)
chr5 (172-229)||(9368800-9368857)
chr5 (172-232)||(95320-95380)
chr5 (172-232)||(17150287-17150347)
chr5 (172-232)||(24346555-24346615)
chr5 (172-232)||(24647666-24647726)
chr5 (189-233)||(37656990-37657034)
chr5 (172-232)||(41666811-41666871)
chr5 (172-232)||(41667047-41667107)
chr5 (172-223)||(37656585-37656636)
chr5 (172-225)||(8081175-8081228)
chr5 (172-229)||(13701125-13701182)
chr5 (172-232)||(4481617-4481677)
chr5 (172-232)||(6919248-6919308)
chr5 (172-232)||(19705873-19705933)
chr5 (172-224)||(24269932-24269984)
chr5 (196-232)||(24528534-24528570)
chr5 (176-232)||(30758353-30758409)
chr5 (181-232)||(15438856-15438907)
chr5 (173-231)||(15439194-15439252)
chr5 (172-230)||(17352491-17352548)
chr5 (172-230)||(32908774-32908832)
chr5 (184-222)||(37781709-37781747)
chr5 (172-232)||(15590143-15590204)
chr5 (172-225)||(24346798-24346851)
chr5 (172-232)||(6637807-6637867)
chr5 (172-232)||(9368565-9368625)
chr5 (172-228)||(13296862-13296918)
chr5 (172-232)||(13358371-13358431)
chr5 (172-224)||(16293321-16293373)
chr5 (169-225)||(18333761-18333817)
chr5 (176-232)||(21306861-21306917)
chr5 (176-232)||(21314699-21314755)
chr5 (172-232)||(26137163-26137223)
chr5 (172-224)||(29239884-29239935)
chr5 (172-232)||(30770103-30770163)
chr5 (175-230)||(2061994-2062049)
chr5 (201-232)||(6413480-6413511)
chr5 (201-232)||(24531598-24531629)
chr5 (172-230)||(17352724-17352782)
chr5 (172-222)||(18885432-18885481)
chr5 (202-232)||(30770319-30770349)
chr5 (172-230)||(31181067-31181125)
chr5 (182-232)||(38976913-38976963)
chr5 (172-229)||(21209978-21210035)
chr5 (172-232)||(6413711-6413770)
chr5 (196-232)||(6637596-6637632)
chr5 (172-224)||(8098288-8098340)
chr5 (172-232)||(24487699-24487759)
chr5 (172-232)||(27133047-27133107)
[»] chr8 (58 HSPs)
chr8 (172-232)||(39052983-39053043)
chr8 (172-232)||(39052591-39052651)
chr8 (174-232)||(5590422-5590480)
chr8 (172-230)||(24532477-24532535)
chr8 (172-232)||(11232483-11232543)
chr8 (172-232)||(12317016-12317076)
chr8 (172-233)||(20094613-20094674)
chr8 (176-232)||(422271-422327)
chr8 (172-232)||(11232248-11232308)
chr8 (172-232)||(39984784-39984844)
chr8 (180-232)||(41790637-41790689)
chr8 (173-232)||(29907780-29907839)
chr8 (173-232)||(34236702-34236761)
chr8 (172-230)||(15042726-15042784)
chr8 (172-230)||(29099796-29099854)
chr8 (172-225)||(3157621-3157674)
chr8 (172-233)||(12688277-12688338)
chr8 (172-232)||(5932003-5932063)
chr8 (176-228)||(5932242-5932294)
chr8 (196-232)||(7669635-7669671)
chr8 (172-232)||(10449970-10450030)
chr8 (172-232)||(17469788-17469848)
chr8 (172-232)||(17477035-17477095)
chr8 (172-232)||(19256640-19256700)
chr8 (172-232)||(19256874-19256934)
chr8 (172-232)||(25325616-25325676)
chr8 (172-232)||(28069411-28069471)
chr8 (172-220)||(31197585-31197633)
chr8 (172-232)||(31197817-31197877)
chr8 (172-232)||(35682835-35682895)
chr8 (173-220)||(5675800-5675847)
chr8 (173-232)||(7729912-7729971)
chr8 (173-232)||(38447481-38447540)
chr8 (172-233)||(5676109-5676170)
chr8 (172-225)||(39960161-39960214)
chr8 (176-232)||(8084101-8084157)
chr8 (172-232)||(18004150-18004210)
chr8 (172-232)||(20301231-20301291)
chr8 (172-232)||(21087863-21087923)
chr8 (172-232)||(24075360-24075420)
chr8 (172-232)||(34842648-34842708)
chr8 (172-232)||(34843087-34843147)
chr8 (172-232)||(36917493-36917553)
chr8 (172-232)||(39743499-39743559)
chr8 (173-232)||(4828264-4828323)
chr8 (173-232)||(5940029-5940088)
chr8 (176-231)||(8928991-8929046)
chr8 (193-232)||(36917311-36917350)
chr8 (172-230)||(7669389-7669447)
chr8 (203-233)||(15042939-15042969)
chr8 (202-232)||(20301501-20301531)
chr8 (202-232)||(21088133-21088163)
chr8 (172-210)||(39052770-39052808)
chr8 (172-225)||(3157070-3157123)
chr8 (195-232)||(20515137-20515174)
chr8 (172-224)||(12547069-12547121)
chr8 (173-229)||(36907485-36907541)
chr8 (201-229)||(42584673-42584701)
[»] chr3 (57 HSPs)
chr3 (172-228)||(34992520-34992576)
chr3 (172-232)||(35038482-35038542)
chr3 (172-232)||(35038248-35038308)
chr3 (174-232)||(22729072-22729130)
chr3 (172-232)||(38791504-38791564)
chr3 (177-232)||(45138856-45138911)
chr3 (167-232)||(30138029-30138094)
chr3 (167-232)||(30147580-30147645)
chr3 (172-220)||(34992811-34992860)
chr3 (172-225)||(39620296-39620349)
chr3 (172-232)||(4155529-4155589)
chr3 (172-232)||(9273165-9273225)
chr3 (172-228)||(16239561-16239617)
chr3 (172-232)||(16927003-16927063)
chr3 (172-232)||(20327668-20327728)
chr3 (172-232)||(20327903-20327963)
chr3 (196-232)||(39269325-39269361)
chr3 (172-232)||(54368486-54368546)
chr3 (172-231)||(21809202-21809261)
chr3 (172-230)||(17001477-17001535)
chr3 (172-226)||(19954278-19954332)
chr3 (175-224)||(13741164-13741213)
chr3 (172-232)||(39683321-39683382)
chr3 (172-232)||(11589755-11589815)
chr3 (172-232)||(20303118-20303178)
chr3 (172-232)||(23691246-23691306)
chr3 (172-232)||(23708046-23708106)
chr3 (172-232)||(23708278-23708338)
chr3 (172-232)||(23726502-23726562)
chr3 (172-232)||(23726734-23726794)
chr3 (172-232)||(23744958-23745018)
chr3 (172-232)||(23745190-23745250)
chr3 (172-232)||(24063483-24063543)
chr3 (172-216)||(27086557-27086601)
chr3 (172-232)||(54368692-54368752)
chr3 (172-232)||(54567862-54567922)
chr3 (202-233)||(472113-472144)
chr3 (173-232)||(30179762-30179821)
chr3 (181-232)||(50083135-50083186)
chr3 (176-222)||(46794028-46794074)
chr3 (195-232)||(1800208-1800245)
chr3 (172-225)||(4008655-4008708)
chr3 (173-218)||(11659750-11659795)
chr3 (199-232)||(23691478-23691511)
chr3 (199-232)||(24063715-24063748)
chr3 (201-230)||(27783062-27783091)
chr3 (172-233)||(52994748-52994809)
chr3 (172-232)||(1723130-1723189)
chr3 (204-232)||(1800039-1800067)
chr3 (172-232)||(2123777-2123837)
chr3 (172-224)||(3975420-3975472)
chr3 (172-232)||(4155294-4155354)
chr3 (172-232)||(6487387-6487447)
chr3 (172-232)||(14839791-14839851)
chr3 (176-232)||(18757816-18757872)
chr3 (198-230)||(33640277-33640309)
chr3 (176-232)||(45139025-45139081)
[»] chr2 (48 HSPs)
chr2 (172-232)||(17719370-17719430)
chr2 (167-232)||(40379498-40379563)
chr2 (172-232)||(94074-94134)
chr2 (172-232)||(16419472-16419532)
chr2 (172-232)||(40379263-40379323)
chr2 (172-232)||(12343804-12343864)
chr2 (172-232)||(16533517-16533577)
chr2 (172-232)||(93177-93236)
chr2 (172-232)||(2324210-2324270)
chr2 (172-232)||(5711493-5711553)
chr2 (172-232)||(17525392-17525452)
chr2 (172-232)||(33606108-33606168)
chr2 (172-232)||(37812322-37812382)
chr2 (172-231)||(15124603-15124662)
chr2 (172-230)||(5711731-5711789)
chr2 (172-225)||(21591751-21591804)
chr2 (172-229)||(31700805-31700862)
chr2 (173-230)||(44404214-44404271)
chr2 (172-232)||(2029739-2029799)
chr2 (172-232)||(4662201-4662261)
chr2 (172-232)||(14466464-14466524)
chr2 (172-232)||(15518730-15518790)
chr2 (172-232)||(32884077-32884137)
chr2 (172-232)||(37812552-37812612)
chr2 (173-232)||(14927073-14927132)
chr2 (172-231)||(27036467-27036526)
chr2 (172-230)||(37769999-37770057)
chr2 (172-230)||(37840307-37840365)
chr2 (172-230)||(42639670-42639728)
chr2 (195-232)||(9927904-9927941)
chr2 (191-232)||(11020547-11020588)
chr2 (172-232)||(2324444-2324504)
chr2 (172-232)||(5509049-5509109)
chr2 (172-232)||(15464739-15464799)
chr2 (174-230)||(18607065-18607121)
chr2 (172-232)||(44403980-44404040)
chr2 (173-220)||(10523224-10523271)
chr2 (195-230)||(25082593-25082628)
chr2 (172-230)||(17854748-17854806)
chr2 (202-232)||(32356386-32356416)
chr2 (175-224)||(24395837-24395886)
chr2 (172-232)||(2029974-2030034)
chr2 (172-232)||(3738903-3738963)
chr2 (172-232)||(5509283-5509343)
chr2 (172-224)||(27897667-27897719)
chr2 (172-232)||(28407847-28407907)
chr2 (172-232)||(29718298-29718358)
chr2 (172-232)||(36316105-36316165)
[»] chr6 (54 HSPs)
chr6 (172-230)||(3680216-3680274)
chr6 (172-233)||(31961148-31961209)
chr6 (172-223)||(8567021-8567072)
chr6 (172-230)||(6542999-6543057)
chr6 (172-230)||(24554087-24554145)
chr6 (167-232)||(6369429-6369494)
chr6 (172-232)||(2753228-2753288)
chr6 (172-232)||(4868631-4868691)
chr6 (172-224)||(12330352-12330404)
chr6 (172-232)||(13353171-13353231)
chr6 (172-232)||(25065148-25065208)
chr6 (172-232)||(33796296-33796356)
chr6 (171-230)||(12199861-12199920)
chr6 (172-230)||(21214955-21215013)
chr6 (172-232)||(3679982-3680042)
chr6 (172-232)||(4868867-4868927)
chr6 (172-232)||(6054373-6054433)
chr6 (172-232)||(9705224-9705284)
chr6 (176-228)||(12330237-12330289)
chr6 (172-232)||(15600906-15600966)
chr6 (172-232)||(17147714-17147774)
chr6 (172-232)||(27772916-27772976)
chr6 (172-224)||(30256783-30256835)
chr6 (172-232)||(33494509-33494569)
chr6 (172-224)||(33494744-33494796)
chr6 (174-232)||(2736221-2736279)
chr6 (172-230)||(9704990-9705048)
chr6 (172-233)||(15081961-15082022)
chr6 (176-229)||(15102988-15103041)
chr6 (172-232)||(4906776-4906836)
chr6 (172-232)||(6237756-6237816)
chr6 (172-224)||(6542770-6542822)
chr6 (172-232)||(12329998-12330058)
chr6 (172-232)||(13740886-13740946)
chr6 (172-232)||(13746386-13746446)
chr6 (172-232)||(21690692-21690752)
chr6 (172-232)||(27653187-27653247)
chr6 (172-232)||(27656428-27656488)
chr6 (172-232)||(27772684-27772744)
chr6 (175-229)||(16722864-16722918)
chr6 (172-229)||(2736459-2736516)
chr6 (172-229)||(2737227-2737284)
chr6 (172-229)||(19712922-19712979)
chr6 (172-232)||(30505707-30505768)
chr6 (183-232)||(33631858-33631907)
chr6 (193-232)||(6065968-6066005)
chr6 (196-232)||(6400674-6400710)
chr6 (172-232)||(6400900-6400960)
chr6 (172-232)||(7638644-7638704)
chr6 (172-232)||(8026359-8026419)
chr6 (196-232)||(13740675-13740711)
chr6 (196-232)||(13746175-13746211)
chr6 (196-232)||(19639167-19639203)
chr6 (196-232)||(30256572-30256608)
[»] scaffold0059 (1 HSPs)
scaffold0059 (12-108)||(4177-4274)
[»] chr7 (56 HSPs)
chr7 (159-232)||(26239970-26240043)
chr7 (172-232)||(3519779-3519839)
chr7 (172-232)||(48243491-48243551)
chr7 (181-232)||(3520094-3520145)
chr7 (172-233)||(43688212-43688273)
chr7 (172-232)||(2404228-2404288)
chr7 (172-232)||(3038138-3038198)
chr7 (172-232)||(9689144-9689204)
chr7 (172-232)||(21055007-21055067)
chr7 (172-232)||(47710413-47710473)
chr7 (172-232)||(47722069-47722129)
chr7 (177-230)||(32278941-32278994)
chr7 (172-232)||(48243115-48243173)
chr7 (172-224)||(3392952-3393004)
chr7 (172-232)||(4267824-4267884)
chr7 (172-232)||(29469575-29469635)
chr7 (172-232)||(29469810-29469870)
chr7 (172-232)||(31485478-31485538)
chr7 (172-232)||(42985177-42985237)
chr7 (172-230)||(2544271-2544329)
chr7 (195-232)||(4454769-4454806)
chr7 (172-232)||(1596564-1596624)
chr7 (172-232)||(2404462-2404522)
chr7 (172-232)||(6001489-6001549)
chr7 (172-232)||(21861264-21861324)
chr7 (172-232)||(21861499-21861559)
chr7 (172-212)||(33834396-33834436)
chr7 (172-232)||(44874400-44874460)
chr7 (172-230)||(5522849-5522907)
chr7 (172-229)||(2315084-2315140)
chr7 (172-229)||(2315327-2315384)
chr7 (172-225)||(18826549-18826602)
chr7 (172-232)||(1596798-1596858)
chr7 (172-232)||(2544501-2544561)
chr7 (172-232)||(6634825-6634885)
chr7 (172-224)||(9625383-9625435)
chr7 (172-232)||(33996133-33996193)
chr7 (172-232)||(34027363-34027423)
chr7 (196-232)||(36277280-36277316)
chr7 (173-221)||(36993368-36993416)
chr7 (172-232)||(48661609-48661669)
chr7 (195-230)||(23796240-23796275)
chr7 (201-232)||(25620135-25620166)
chr7 (193-232)||(31485713-31485752)
chr7 (172-230)||(4268024-4268082)
chr7 (174-232)||(20305717-20305775)
chr7 (172-230)||(26562129-26562187)
chr7 (172-230)||(31257087-31257145)
chr7 (172-230)||(33996367-33996425)
chr7 (172-229)||(17202149-17202206)
chr7 (172-233)||(31257320-31257381)
chr7 (191-232)||(32279120-32279161)
chr7 (172-232)||(9688924-9688984)
chr7 (172-232)||(34027597-34027657)
chr7 (202-230)||(35308202-35308230)
chr7 (172-232)||(41190984-41191044)
[»] scaffold0129 (2 HSPs)
scaffold0129 (172-224)||(14508-14560)
scaffold0129 (179-230)||(14280-14331)
[»] scaffold0001 (1 HSPs)
scaffold0001 (172-227)||(429843-429898)
[»] scaffold0519 (2 HSPs)
scaffold0519 (172-232)||(1886-1946)
scaffold0519 (172-232)||(2121-2181)
[»] scaffold0766 (1 HSPs)
scaffold0766 (172-232)||(6244-6304)
[»] scaffold0692 (2 HSPs)
scaffold0692 (172-232)||(5808-5868)
scaffold0692 (197-232)||(5598-5633)
[»] scaffold0047 (2 HSPs)
scaffold0047 (172-232)||(12851-12911)
scaffold0047 (172-232)||(12617-12677)
[»] scaffold0400 (1 HSPs)
scaffold0400 (172-225)||(3814-3867)
[»] scaffold0365 (1 HSPs)
scaffold0365 (172-225)||(4458-4511)
[»] scaffold0060 (1 HSPs)
scaffold0060 (172-232)||(20545-20605)
[»] scaffold0005 (1 HSPs)
scaffold0005 (173-232)||(288711-288770)
[»] scaffold0459 (2 HSPs)
scaffold0459 (173-230)||(13072-13129)
scaffold0459 (172-232)||(13303-13363)
[»] scaffold0366 (4 HSPs)
scaffold0366 (173-230)||(10713-10770)
scaffold0366 (173-230)||(14379-14436)
scaffold0366 (172-232)||(10944-11004)
scaffold0366 (172-232)||(14610-14670)
[»] scaffold0092 (1 HSPs)
scaffold0092 (172-232)||(5625-5685)
[»] scaffold0050 (1 HSPs)
scaffold0050 (172-232)||(69587-69647)
[»] scaffold0027 (1 HSPs)
scaffold0027 (172-232)||(121523-121583)
[»] scaffold0083 (1 HSPs)
scaffold0083 (202-232)||(51236-51266)
[»] scaffold0334 (1 HSPs)
scaffold0334 (172-232)||(4483-4543)


Alignment Details
Target: chr4 (Bit Score: 201; Significance: 1e-110; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 12 - 232
Target Start/End: Complemental strand, 35646039 - 35645819
Alignment:
Q  12 aagcatagggaatgaagagaagatttcatgtgaaagagaacttggcagaaaggtggacatggcttaagctttggtttttgttgagtgataaaaaccattc 111  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||    
T  35646039 aagcatacggaatgaagagaagatttcatgtgaaagagaacttggcagaatggtggacatggcttaagctttggtttttgttgagtgataaaaaccactc 35645940  T
Q  112 tcttccttcttatatatcacttggtgctatgattttattggttcttccattgacatctggtaagagtcccacatcgaataggtgatggtctgacaatgtg 211  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||    
T  35645939 tcttccttcttatatatcacttggtgctatgattttattggttcttccattgacatatgttaagagtcccacatcgaataggtgatggtctgacaatgtg 35645840  T
Q  212 tttataagtgggggcaatcct 232  Q
    |||||||||||||||||||||    
T  35645839 tttataagtgggggcaatcct 35645819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 12 - 157
Target Start/End: Complemental strand, 35655467 - 35655322
Alignment:
Q  12 aagcatagggaatgaagagaagatttcatgtgaaagagaacttggcagaaaggtggacatggcttaagctttggtttttgttgagtgataaaaaccattc 111  Q
    ||||||||||||||||||||||||||| ||||||||||||||  | ||||||||||||||||||||| ||||||||| ||||||| ||||||||||| ||    
T  35655467 aagcatagggaatgaagagaagatttcctgtgaaagagaactgtgtagaaaggtggacatggcttaacctttggtttctgttgagcgataaaaaccactc 35655368  T
Q  112 tcttccttcttatatatcacttggtgctatgattttattggttctt 157  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||    
T  35655367 tcttccttcttatatatcacttggtggtatgattttaatggttctt 35655322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 13 - 98
Target Start/End: Complemental strand, 35676534 - 35676449
Alignment:
Q  13 agcatagggaatgaagagaagatttcatgtgaaagagaacttggcagaaaggtggacatggcttaagctttggtttttgttgagtg 98  Q
    |||||||||||||||||||||||||||||||||||| ||||| | ||||| ||||||||||||||||||||||||| | |||||||    
T  35676534 agcatagggaatgaagagaagatttcatgtgaaagaaaactttgtagaaatgtggacatggcttaagctttggtttctattgagtg 35676449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 31254521 - 31254461
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  31254521 taagagtcccacatcggataggtgatggcctgacaatgtgtttataagtgggggcaatcct 31254461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 28245640 - 28245580
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  28245640 taagagtctcacatcggataggtgatggcctgacaatgtgtttataagtgggggcaatcct 28245580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 50543444 - 50543384
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||| ||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  50543444 taagagccccacatcggataggtgatggtctgacaatgtgtgtataagtgggggcaatcct 50543384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 50543681 - 50543621
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||||||| ||||||||||| |||||||||||| |||||||||||||||||||    
T  50543681 taagagtcccacatcggataggtgatggcctgacaatgtgtgtataagtgggggcaatcct 50543621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 167 - 230
Target Start/End: Original strand, 9279192 - 9279255
Alignment:
Q  167 tctggtaagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatc 230  Q
    |||| |||||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||    
T  9279192 tctgttaagagtcgcacatcggataggtgatggcctgacaatgtgtttataagtgggggcaatc 9279255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 11036860 - 11036800
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    ||||||| | |||||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  11036860 taagagtacaacatcggataggtgatggcctgacaatgtgtttataagtgggggcaatcct 11036800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 13555581 - 13555521
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||||||| |||||||||||| |||||||||| ||||||||||||| ||||||    
T  13555581 taagagtcccacatcggataggtgatggtttgacaatgtgcttataagtgggggaaatcct 13555521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 27634195 - 27634135
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||||||| |||||  |||| ||||||||||||||||||||||||||||||||    
T  27634195 taagagtcccacatcggataggacatggcctgacaatgtgtttataagtgggggcaatcct 27634135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 39902677 - 39902617
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||||||| |||||  |||| ||||||||||||||||||||||||||||||||    
T  39902677 taagagtcccacatcggataggacatggcctgacaatgtgtttataagtgggggcaatcct 39902617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 173 - 232
Target Start/End: Original strand, 22827509 - 22827568
Alignment:
Q  173 aagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    ||||||||||||||| ||||| ||||| ||||||| ||||||||||||||||||||||||    
T  22827509 aagagtcccacatcggataggagatggcctgacaacgtgtttataagtgggggcaatcct 22827568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 166 - 232
Target Start/End: Complemental strand, 27634636 - 27634570
Alignment:
Q  166 atctggtaagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    ||||| |||||||||||||||| |||||  |||| |||||||||||||||| |||||||||||||||    
T  27634636 atctgttaagagtcccacatcggataggacatggcctgacaatgtgtttatgagtgggggcaatcct 27634570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 172 - 224
Target Start/End: Original strand, 17111738 - 17111790
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggg 224  Q
    |||||||||||||||  ||||||||||| ||||||||||||||||||||||||    
T  17111738 taagagtcccacatcagataggtgatggcctgacaatgtgtttataagtgggg 17111790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 35788629 - 35788689
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||||||  |||||  |||| ||||||||||||||||||||||||||||||||    
T  35788629 taagagtcccacatcagataggacatggcctgacaatgtgtttataagtgggggcaatcct 35788689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 35788864 - 35788924
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||||||| ||||   |||| ||||||||||||||||||||||||||||||||    
T  35788864 taagagtcccacatcggatagaacatggcctgacaatgtgtttataagtgggggcaatcct 35788924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 173 - 232
Target Start/End: Complemental strand, 44118972 - 44118913
Alignment:
Q  173 aagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    ||||||||||||||| ||| | ||||| ||||||||||||||||||||||||| ||||||    
T  44118972 aagagtcccacatcggataagagatggcctgacaatgtgtttataagtgggggtaatcct 44118913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 172 - 218
Target Start/End: Original strand, 42662433 - 42662479
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataa 218  Q
    ||||| |||||||||||||||| ||||||||||||||||||||||||    
T  42662433 taagaatcccacatcgaataggagatggtctgacaatgtgtttataa 42662479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 400679 - 400619
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||| ||||||  ||| | ||||||||||||||||||||||||||||||| ||||||    
T  400679 taagagtctcacatcagatatgagatggtctgacaatgtgtttataagtgggggaaatcct 400619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 5846116 - 5846176
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||| |||||||  |||| | |||||||||||| |||||||||||||||||||||||    
T  5846116 taagagtctcacatcggttaggagttggtctgacaatttgtttataagtgggggcaatcct 5846176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 21498324 - 21498384
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    ||||||||||||||||  |||| | ||| |||||||| |||||||||||||||||||||||    
T  21498324 taagagtcccacatcggttaggagttggcctgacaatttgtttataagtgggggcaatcct 21498384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 21498765 - 21498825
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    ||||||||||||||||  |||| | ||| |||||||| |||||||||||||||||||||||    
T  21498765 taagagtcccacatcggttaggagttggcctgacaatttgtttataagtgggggcaatcct 21498825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 22231187 - 22231127
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    ||||||||| |||||| |||||  |||| |||||||||||||||||||||||| |||||||    
T  22231187 taagagtcctacatcggataggatatggcctgacaatgtgtttataagtggggacaatcct 22231127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 22863444 - 22863504
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||| ||||||| | ||  ||||| ||||||||||||||||||||||||||||||||    
T  22863444 taagagtctcacatcggacagaagatggcctgacaatgtgtttataagtgggggcaatcct 22863504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 53828403 - 53828343
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    ||||||||||||||||  |||| | ||| |||||||| |||||||||||||||||||||||    
T  53828403 taagagtcccacatcggttaggagttggcctgacaatttgtttataagtgggggcaatcct 53828343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 173 - 232
Target Start/End: Original strand, 53698998 - 53699057
Alignment:
Q  173 aagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||| |||||| | |||| ||||||||| |||||||||||| ||||||||||    
T  53698998 aagagtcccacaacgaataagagatgatctgacaatatgtttataagtgtgggcaatcct 53699057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 87
Target Start/End: Complemental strand, 35673026 - 35672949
Alignment:
Q  12 aagcatagggaatgaaga--gaagatttcatgtgaaagagaacttggcagaaaggtggacatggcttaagctttggtt 87  Q
    |||||||||||||||| |  |||  ||||||| ||||||||| || | ||||||||||||||||||||| ||||||||    
T  35673026 aagcatagggaatgaatatagaaactttcatgcgaaagagaattttgtagaaaggtggacatggcttaacctttggtt 35672949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 172 - 229
Target Start/End: Original strand, 20821943 - 20822000
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaat 229  Q
    ||||||||||||||||  |||| | ||| |||||||| ||||||||||||||||||||    
T  20821943 taagagtcccacatcggttaggagttggcctgacaatttgtttataagtgggggcaat 20822000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 167 - 232
Target Start/End: Complemental strand, 53828642 - 53828577
Alignment:
Q  167 tctggtaagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||| ||||||| ||||||||  |||| | ||| |||||||| |||||||||||||||||||||||    
T  53828642 tctgttaagagttccacatcggttaggagttggcctgacaatttgtttataagtgggggcaatcct 53828577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 5846349 - 5846409
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    ||||||||||||||||  |||| | |||  ||||||| |||||||||||||||||||||||    
T  5846349 taagagtcccacatcggttaggagttggcatgacaatttgtttataagtgggggcaatcct 5846409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 9685602 - 9685662
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||| |||||  |||| | |||||| ||||| |||||||||||||||||||||||    
T  9685602 taagagtcccgcatcggttaggagttggtctaacaatttgtttataagtgggggcaatcct 9685662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 224
Target Start/End: Complemental strand, 13611863 - 13611811
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggg 224  Q
    ||||||| |||||| | |||||||||||||||||||| | |||||||||||||    
T  13611863 taagagttccacattggataggtgatggtctgacaatatatttataagtgggg 13611811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 22845561 - 22845501
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||||||  ||| |  |||| ||||||||||||||||||||||||| ||||||    
T  22845561 taagagtcccacatcagatatgacatggcctgacaatgtgtttataagtgggggtaatcct 22845501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 35796856 - 35796796
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    ||||||| |||||||| | |||  ||||  |||||||||||||||||||||||||||||||    
T  35796856 taagagttccacatcggacaggacatggcatgacaatgtgtttataagtgggggcaatcct 35796796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 35819242 - 35819182
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    ||||||||||||||||  |||| | ||| |||||||| |||||||| ||||||||||||||    
T  35819242 taagagtcccacatcggttaggagttggcctgacaatttgtttatatgtgggggcaatcct 35819182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 37836050 - 37836110
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||||||| | |||  |||| || ||||||| |||||||||||||||||||||    
T  37836050 taagagtcccacatcggacaggacatggcctaacaatgtatttataagtgggggcaatcct 37836110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 53815043 - 53814983
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    ||||||| ||||||||  |||| | ||| |||||||| |||||||||||||||||||||||    
T  53815043 taagagttccacatcggttaggagttggcctgacaatttgtttataagtgggggcaatcct 53814983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 223
Target Start/End: Original strand, 21684968 - 21685019
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtggg 223  Q
    |||||||| ||||||| |||||  |||| |||||||||||||||||||||||    
T  21684968 taagagtctcacatcggataggacatggcctgacaatgtgtttataagtggg 21685019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 230
Target Start/End: Original strand, 6218409 - 6218467
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatc 230  Q
    |||||||| ||||||  ||||| ||||  || |||||||||||||||||||||||||||    
T  6218409 taagagtctcacatcagataggagatgacctaacaatgtgtttataagtgggggcaatc 6218467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 230
Target Start/End: Complemental strand, 11036625 - 11036567
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatc 230  Q
    ||||||||||| |||  ||||||||||   ||||||||||||||||||| |||||||||    
T  11036625 taagagtcccaaatcagataggtgatgacatgacaatgtgtttataagttggggcaatc 11036567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 232
Target Start/End: Complemental strand, 28246169 - 28246139
Alignment:
Q  202 tgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||||||||||||||||||||||    
T  28246169 tgacaatgtgtttataagtgggggcaatcct 28246139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 230
Target Start/End: Complemental strand, 45784992 - 45784934
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatc 230  Q
    |||||||||||||||| ||||||||||   ||||| | ||||||||||||| |||||||    
T  45784992 taagagtcccacatcggataggtgatgacttgacagtatgtttataagtggcggcaatc 45784934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 175 - 232
Target Start/End: Original strand, 1518137 - 1518194
Alignment:
Q  175 gagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||||  |||| | ||  |||||||| |||||||||||||||||||||||    
T  1518137 gagtcccacatcggttaggagttgacctgacaatttgtttataagtgggggcaatcct 1518194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 173 - 230
Target Start/End: Original strand, 6218175 - 6218232
Alignment:
Q  173 aagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatc 230  Q
    ||||||| ||||||| ||||| |||||  | ||||| |||||||||||||||||||||    
T  6218175 aagagtctcacatcggataggagatggcttcacaatatgtttataagtgggggcaatc 6218232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 196 - 229
Target Start/End: Original strand, 7892542 - 7892575
Alignment:
Q  196 atggtctgacaatgtgtttataagtgggggcaat 229  Q
    ||||||||||||||||||||||||||| ||||||    
T  7892542 atggtctgacaatgtgtttataagtggaggcaat 7892575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 201 - 230
Target Start/End: Original strand, 52559566 - 52559595
Alignment:
Q  201 ctgacaatgtgtttataagtgggggcaatc 230  Q
    ||||||||||||||||||||||||||||||    
T  52559566 ctgacaatgtgtttataagtgggggcaatc 52559595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 172 - 229
Target Start/End: Complemental strand, 54054919 - 54054862
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaat 229  Q
    ||||||||||||||||| |||| | ||  || ||||| ||||||||||||||||||||    
T  54054919 taagagtcccacatcgattaggagttgacctaacaatttgtttataagtgggggcaat 54054862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 980164 - 980104
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    ||||||||||||||||  |||| | ||  |||| ||| |||||||||||||||||||||||    
T  980164 taagagtcccacatcggttaggagttgacctgagaatttgtttataagtgggggcaatcct 980104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 224
Target Start/End: Complemental strand, 5398325 - 5398273
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggg 224  Q
    |||||||||||||| | | | || |||||||||||||||||||||||| ||||    
T  5398325 taagagtcccacattggacaagtcatggtctgacaatgtgtttataagagggg 5398273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 229
Target Start/End: Original strand, 6835145 - 6835201
Alignment:
Q  173 aagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaat 229  Q
    ||||||||||||||||||| ||||| |  ||||||||  ||||||||||| ||||||    
T  6835145 aagagtcccacatcgaataagtgatagcttgacaatgcatttataagtggcggcaat 6835201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 13555361 - 13555301
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    ||||||| |||||||| |||| ||||||||||||| ||| ||||| |||||  ||||||||    
T  13555361 taagagttccacatcggatagatgatggtctgacactgtatttatgagtggatgcaatcct 13555301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 18528331 - 18528271
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||| |||||| |||| | |||||  || |||||||||||||||||| |||||||||    
T  18528331 taagagtctcacatcaaatacgagatggcatggcaatgtgtttataagtggcggcaatcct 18528271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 35797091 - 35797031
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    ||||||||||| |||| | ||| ||||   ||||||| |||||||||||||||||||||||    
T  35797091 taagagtcccatatcggacaggagatgacatgacaatatgtttataagtgggggcaatcct 35797031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 54055146 - 54055086
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    ||||||||||||||||  |||  | ||| || ||||| |||||||||||||||||||||||    
T  54055146 taagagtcccacatcggttagaagttggcctaacaatttgtttataagtgggggcaatcct 54055086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 55; Significance: 1e-22; HSPs: 64)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 172 - 230
Target Start/End: Original strand, 25713363 - 25713421
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatc 230  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  25713363 taagagtcccacatcggataggtgatggtctgacaatgtgtttataagtgggggcaatc 25713421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 172 - 233
Target Start/End: Complemental strand, 2859506 - 2859445
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcctt 233  Q
    |||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  2859506 taagagtcccacatcggataggtgatggcctgacaatgtgtttataagtgggggcaatcctt 2859445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 172 - 233
Target Start/End: Original strand, 35772234 - 35772295
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcctt 233  Q
    |||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||||    
T  35772234 taagagtcccacatcggataggagatggcctgacaatgtgtttataagtgggggcaatcctt 35772295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 8870803 - 8870743
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||||||| || ||||||||| |||||||||||||||||||||||||||||||    
T  8870803 taagagtcccacatcggatcggtgatggtgtgacaatgtgtttataagtgggggcaatcct 8870743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 20208640 - 20208580
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||||||| |||||  |||||||||||||||||||||||||||||||||||||    
T  20208640 taagagtcccacatcggataggacatggtctgacaatgtgtttataagtgggggcaatcct 20208580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 25145599 - 25145539
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||| ||||||| |||||||||||||||||||||||||||| |||||||||||||||    
T  25145599 taagagtctcacatcggataggtgatggtctgacaatgtgtttattagtgggggcaatcct 25145539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 51459944 - 51459884
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||||||| ||||||||||| || |||||||||||||||||||||||||||||    
T  51459944 taagagtcccacatcggataggtgatggcctaacaatgtgtttataagtgggggcaatcct 51459884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 172 - 230
Target Start/End: Original strand, 38668330 - 38668388
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatc 230  Q
    |||||||||||||||| ||| |||||||| |||||||||||||||||||||||||||||    
T  38668330 taagagtcccacatcggatatgtgatggtttgacaatgtgtttataagtgggggcaatc 38668388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 2859741 - 2859681
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||| ||||||| |||||||||||||||||||||||||||| |||||||| ||||||    
T  2859741 taagagtctcacatcggataggtgatggtctgacaatgtgtttattagtgggggtaatcct 2859681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 173 - 233
Target Start/End: Complemental strand, 7826144 - 7826084
Alignment:
Q  173 aagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcctt 233  Q
    |||||||||||||||||||   |||||||||||||||||||||||||||||| ||||||||    
T  7826144 aagagtcccacatcgaataaaagatggtctgacaatgtgtttataagtggggacaatcctt 7826084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 38733352 - 38733412
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||||||| ||| |||||||||||||||| |||||||||||| ||||||||||    
T  38733352 taagagtcccacatcggatatgtgatggtctgacaatatgtttataagtgagggcaatcct 38733412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 39808436 - 39808496
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||||| | ||| |||||||||||||||||||||||||||||||| |||||||    
T  39808436 taagagtcccacattggatatgtgatggtctgacaatgtgtttataagtggggacaatcct 39808496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 52961552 - 52961612
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||| ||||||||||| ||||| ||||||||||||||||||||||||||| ||||||||||    
T  52961552 taagtgtcccacatcggataggagatggtctgacaatgtgtttataagtgagggcaatcct 52961612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 173 - 232
Target Start/End: Original strand, 17468315 - 17468374
Alignment:
Q  173 aagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    ||||||||||||||| ||| | |||||||||||||| |||||||||||||||||||||||    
T  17468315 aagagtcccacatcggataagagatggtctgacaatatgtttataagtgggggcaatcct 17468374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 223
Target Start/End: Original strand, 38733122 - 38733173
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtggg 223  Q
    ||||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  38733122 taagagttccacatcgaatatgtgatggtctgacaatgtgtttataagtggg 38733173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 172 - 230
Target Start/End: Original strand, 16163137 - 16163195
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatc 230  Q
    |||||||||||||||| ||||||||||   |||||||||||||||||||||||||||||    
T  16163137 taagagtcccacatcggataggtgatgacttgacaatgtgtttataagtgggggcaatc 16163195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 172 - 229
Target Start/End: Complemental strand, 26173570 - 26173513
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaat 229  Q
    |||||||||||||||  ||| | |||||||||||||||||||||||||||||||||||    
T  26173570 taagagtcccacatcagatatgagatggtctgacaatgtgtttataagtgggggcaat 26173513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 175 - 232
Target Start/End: Complemental strand, 52650882 - 52650825
Alignment:
Q  175 gagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    ||||||||||||| ||||| ||||| | ||||||||||||||||||||||||||||||    
T  52650882 gagtcccacatcggataggagatggccggacaatgtgtttataagtgggggcaatcct 52650825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 4098277 - 4098217
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||| ||||||||||| | ||| ||||||| ||||||||||||||||||||||||||    
T  4098277 taagagtctcacatcgaatatgagatcgtctgacgatgtgtttataagtgggggcaatcct 4098217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 15986447 - 15986387
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    ||||||||| |||||| ||||| ||| | ||||||||||||||||||||||||||||||||    
T  15986447 taagagtcctacatcggataggagatagcctgacaatgtgtttataagtgggggcaatcct 15986387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 176 - 232
Target Start/End: Original strand, 27413556 - 27413612
Alignment:
Q  176 agtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||| ||||||||||| |||||||| ||||||||||||| |||||||||    
T  27413556 agtcccacatcgcataggtgatggcctgacaatatgtttataagtggaggcaatcct 27413612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 175 - 230
Target Start/End: Original strand, 17402555 - 17402610
Alignment:
Q  175 gagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatc 230  Q
    ||||||||||||| |||||||||||||||||||| |||||| ||||| ||||||||    
T  17402555 gagtcccacatcggataggtgatggtctgacaatttgtttaaaagtgcgggcaatc 17402610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 173 - 232
Target Start/End: Complemental strand, 39348232 - 39348173
Alignment:
Q  173 aagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    ||||||||||||||| ||||| ||| | |||||||||||||||||||||| |||||||||    
T  39348232 aagagtcccacatcggataggagatagcctgacaatgtgtttataagtggaggcaatcct 39348173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 172 - 231
Target Start/End: Complemental strand, 51459819 - 51459760
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcc 231  Q
    ||||||||||| |||| ||||||||| | || ||||||||||||||||||||||||||||    
T  51459819 taagagtcccatatcggataggtgatagcctaacaatgtgtttataagtgggggcaatcc 51459760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 172 - 230
Target Start/End: Original strand, 3169736 - 3169794
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatc 230  Q
    ||||||||||||||||  |||| | |||||||||||| |||||||||||||||||||||    
T  3169736 taagagtcccacatcggttaggagttggtctgacaatttgtttataagtgggggcaatc 3169794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 174 - 232
Target Start/End: Original strand, 40079124 - 40079182
Alignment:
Q  174 agagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    ||||||| |||||| ||||| ||||  ||||||||||||||||||||||||||||||||    
T  40079124 agagtcctacatcggataggagatgacctgacaatgtgtttataagtgggggcaatcct 40079182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 167 - 232
Target Start/End: Complemental strand, 4113125 - 4113060
Alignment:
Q  167 tctggtaagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||| ||| |||||||||||| || ||  |||| ||||||||||||||||||||||||||||||||    
T  4113125 tctgttaaaagtcccacatcggatgggacatggcctgacaatgtgtttataagtgggggcaatcct 4113060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 172 - 225
Target Start/End: Original strand, 11924891 - 11924944
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtggggg 225  Q
    |||||||  ||||||| |||||||||||||||||||| ||||||||||||||||    
T  11924891 taagagttacacatcggataggtgatggtctgacaatatgtttataagtggggg 11924944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 172 - 221
Target Start/End: Complemental strand, 51460196 - 51460147
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtg 221  Q
    |||||||||||||||| ||||||||||| || ||||||||||||||||||    
T  51460196 taagagtcccacatcggataggtgatggcctaacaatgtgtttataagtg 51460147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 369605 - 369665
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    ||||||||||||||||   ||| ||| |||||| |||||||||||||||||||||||||||    
T  369605 taagagtcccacatcgggcaggagatagtctgaaaatgtgtttataagtgggggcaatcct 369665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 173 - 233
Target Start/End: Complemental strand, 3477289 - 3477229
Alignment:
Q  173 aagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcctt 233  Q
    |||| |||||||||||||||| ||||  |||| ||||||||||||||||||||| ||||||    
T  3477289 aagaatcccacatcgaataggagatgtcctgataatgtgtttataagtgggggcgatcctt 3477229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 12245076 - 12245016
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    ||||||||| ||||||| |||| | ||||||| |||| |||||||||||||||||||||||    
T  12245076 taagagtcctacatcgattaggagttggtctggcaatttgtttataagtgggggcaatcct 12245016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 25145834 - 25145774
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||| ||||||| ||||||||||  |||||||||| ||||| |||||||||||||||    
T  25145834 taagagtctcacatcggataggtgatgacctgacaatgtatttattagtgggggcaatcct 25145774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 182 - 230
Target Start/End: Complemental strand, 40524755 - 40524707
Alignment:
Q  182 acatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatc 230  Q
    |||||||||| | |||||||||||| |||||||||||||||||||||||    
T  40524755 acatcgaatatgagatggtctgacagtgtgtttataagtgggggcaatc 40524707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 51588962 - 51589022
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    ||||||||||||||||  |||| | |||||||||||| |||||||||||| ||||||||||    
T  51588962 taagagtcccacatcggttaggagttggtctgacaatttgtttataagtgagggcaatcct 51589022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 51589196 - 51589256
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    ||||||||||||||||  |||| | |||||||||||| |||||||||||| ||||||||||    
T  51589196 taagagtcccacatcggttaggagttggtctgacaatttgtttataagtgagggcaatcct 51589256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 231
Target Start/End: Original strand, 17412306 - 17412365
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcc 231  Q
    |||||||| ||||||| ||||| ||| |||||| ||||||||||||||||||| ||||||    
T  17412306 taagagtctcacatcggataggagattgtctgataatgtgtttataagtggggacaatcc 17412365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 219
Target Start/End: Original strand, 33156939 - 33156986
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataag 219  Q
    ||||||| |||||||| ||||| |||||||||||||||||||||||||    
T  33156939 taagagttccacatcggataggagatggtctgacaatgtgtttataag 33156986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 172 - 230
Target Start/End: Complemental strand, 17452942 - 17452884
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatc 230  Q
    |||||||||||||||| ||| |  |||| |||||||||| |||||||||||||||||||    
T  17452942 taagagtcccacatcggataagacatggcctgacaatgtatttataagtgggggcaatc 17452884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 172 - 218
Target Start/End: Original strand, 26603398 - 26603444
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataa 218  Q
    |||||||| ||||||||||||| |||||||||||||| |||||||||    
T  26603398 taagagtctcacatcgaataggagatggtctgacaatatgtttataa 26603444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 172 - 225
Target Start/End: Complemental strand, 4112885 - 4112832
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtggggg 225  Q
    |||||||||||||||| || ||  |||| |||||||||||||||||||||||||    
T  4112885 taagagtcccacatcggatgggacatggcctgacaatgtgtttataagtggggg 4112832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 172 - 233
Target Start/End: Complemental strand, 28408156 - 28408095
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcctt 233  Q
    ||||||||||||||||  |||  | |||||||||||| ||||||||||||||| ||||||||    
T  28408156 taagagtcccacatcggttagaagttggtctgacaatttgtttataagtggggacaatcctt 28408095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 172 - 229
Target Start/End: Original strand, 35892261 - 35892318
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaat 229  Q
    |||||||||||||||  |||   |||||||||||||||| ||||||||||||||||||    
T  35892261 taagagtcccacatcagatataagatggtctgacaatgtatttataagtgggggcaat 35892318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 167 - 224
Target Start/End: Original strand, 38080570 - 38080627
Alignment:
Q  167 tctggtaagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggg 224  Q
    |||| |||||||||||||||| || || ||||| |||||||||||||||||| |||||    
T  38080570 tctgttaagagtcccacatcggatgggagatggcctgacaatgtgtttataattgggg 38080627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 4098516 - 4098456
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||| ||||||| |||   |||||| ||| |||||||||||||||||||||||||||    
T  4098516 taagagtcgcacatcggataatagatggtttgataatgtgtttataagtgggggcaatcct 4098456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 224
Target Start/End: Original strand, 16162903 - 16162955
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggg 224  Q
    |||||||| ||||||| ||| ||||||| |||||||||||||| |||||||||    
T  16162903 taagagtctcacatcggatatgtgatggcctgacaatgtgtttttaagtgggg 16162955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 26176878 - 26176938
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||||||| | |||  |||| ||||||||||| ||||||||| ||||||||||    
T  26176878 taagagtcccacatcggacaggacatggcctgacaatgtgcttataagtgagggcaatcct 26176938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 26177113 - 26177173
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||||||| | |||  |||  ||||||| ||||||||||||||||||||||||    
T  26177113 taagagtcccacatcggacaggacatgacctgacaacgtgtttataagtgggggcaatcct 26177173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 30369805 - 30369865
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    ||||||| |||||||| ||| | ||||||| |||||| ||||||||||| |||||||||||    
T  30369805 taagagttccacatcggatatgagatggtccgacaatatgtttataagtaggggcaatcct 30369865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 232
Target Start/End: Complemental strand, 21626452 - 21626393
Alignment:
Q  173 aagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    ||||||||||||||  ||| | ||||| |||||||| ||||||||||||||||| |||||    
T  21626452 aagagtcccacatcagataagagatggcctgacaatatgtttataagtgggggccatcct 21626393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 233
Target Start/End: Original strand, 3169970 - 3170032
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtg-tttataagtgggggcaatcctt 233  Q
    ||||||||||||||||  |||| | |||||||||||| || |||||||||| |||||||||||    
T  3169970 taagagtcccacatcggttaggagttggtctgacaatttgttttataagtgagggcaatcctt 3170032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 230
Target Start/End: Complemental strand, 4112654 - 4112596
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatc 230  Q
    |||||||||||||||| | |||  ||||  ||||||||||||||||||| |||||||||    
T  4112654 taagagtcccacatcggacaggacatggcatgacaatgtgtttataagtaggggcaatc 4112596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 230
Target Start/End: Complemental strand, 26173310 - 26173280
Alignment:
Q  200 tctgacaatgtgtttataagtgggggcaatc 230  Q
    |||||||||||||||||||||||||||||||    
T  26173310 tctgacaatgtgtttataagtgggggcaatc 26173280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 230
Target Start/End: Complemental strand, 51460321 - 51460263
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatc 230  Q
    ||||||||| |||||  ||||||||||  || ||||||||||||||||| |||||||||    
T  51460321 taagagtccaacatcagataggtgatgacctaacaatgtgtttataagtaggggcaatc 51460263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 177 - 230
Target Start/End: Original strand, 9499221 - 9499274
Alignment:
Q  177 gtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatc 230  Q
    ||||||| ||| ||||| ||| |||||||||| ||||||||||| |||||||||    
T  9499221 gtcccacgtcggataggagatagtctgacaatatgtttataagtaggggcaatc 9499274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 172 - 233
Target Start/End: Original strand, 32952041 - 32952102
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcctt 233  Q
    ||||| |||||||| | ||||| | |||| ||||||||||||||||||||| | ||||||||    
T  32952041 taagaatcccacattggataggagttggtttgacaatgtgtttataagtggagccaatcctt 32952102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 855951 - 856011
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    ||||||| ||||| || |||||  |||| ||||||||||||||||| |||||| |||||||    
T  855951 taagagttccacaccggataggacatggcctgacaatgtgtttatacgtggggacaatcct 856011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 196 - 232
Target Start/End: Original strand, 17402708 - 17402744
Alignment:
Q  196 atggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||| |||||||| |||||||||||||||||||||||    
T  17402708 atggcctgacaatttgtttataagtgggggcaatcct 17402744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 232
Target Start/End: Complemental strand, 17452789 - 17452733
Alignment:
Q  176 agtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||  ||| |  |||| |||||||||| |||||||||||||||||||||    
T  17452789 agtcccacatcagataagacatggcctgacaatgtatttataagtgggggcaatcct 17452733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 25137417 - 25137357
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    ||||||||||||||||  |||| | ||| |||||||| |||||||||||  ||||||||||    
T  25137417 taagagtcccacatcggttaggagttggcctgacaatttgtttataagtatgggcaatcct 25137357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 230
Target Start/End: Original strand, 38668125 - 38668153
Alignment:
Q  202 tgacaatgtgtttataagtgggggcaatc 230  Q
    |||||||||||||||||||||||||||||    
T  38668125 tgacaatgtgtttataagtgggggcaatc 38668153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 41035941 - 41035881
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||| ||| ||| |||||  |||| ||| |||| |||||||||||||||||||||||    
T  41035941 taagagtctcacgtcggataggacatggcctgccaatatgtttataagtgggggcaatcct 41035881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 224
Target Start/End: Complemental strand, 42586552 - 42586500
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggg 224  Q
    |||||||| ||||||| ||| | ||||| |||||||||||| |||||||||||    
T  42586552 taagagtctcacatcggataagagatggcctgacaatgtgtatataagtgggg 42586500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 224
Target Start/End: Original strand, 43409777 - 43409829
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggg 224  Q
    |||||||| ||||||| ||||   ||||||||||||||| |||||||||||||    
T  43409777 taagagtctcacatcggatagaacatggtctgacaatgtatttataagtgggg 43409829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 54; Significance: 4e-22; HSPs: 56)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 175 - 232
Target Start/End: Original strand, 15480295 - 15480352
Alignment:
Q  175 gagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  15480295 gagtcccacatcggataggtgatggtctgacaatgtgtttataagtgggggcaatcct 15480352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 2063847 - 2063787
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||||||| ||||   |||||||||||||||||||||||||||||||||||||    
T  2063847 taagagtcccacatcggatagaacatggtctgacaatgtgtttataagtgggggcaatcct 2063787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 18333579 - 18333519
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    ||||| |||||||||| ||||| ||||||||||||||||||||||||||||||| ||||||    
T  18333579 taagaatcccacatcggataggagatggtctgacaatgtgtttataagtgggggtaatcct 18333519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 20510756 - 20510696
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||| ||||||||| ||||||||||| |||||||| |||||||||||||||||||||||    
T  20510756 taagagccccacatcggataggtgatggcctgacaatatgtttataagtgggggcaatcct 20510696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 173 - 232
Target Start/End: Complemental strand, 1564680 - 1564621
Alignment:
Q  173 aagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    ||||||||||||||| ||| | ||||||||||||||||| ||||||||||||||||||||    
T  1564680 aagagtcccacatcggataagagatggtctgacaatgtgattataagtgggggcaatcct 1564621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 172 - 230
Target Start/End: Complemental strand, 33337352 - 33337294
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatc 230  Q
    |||||||||||||| | ||||||||||| |||||||| |||||||||||||||||||||    
T  33337352 taagagtcccacattggataggtgatggcctgacaatatgtttataagtgggggcaatc 33337294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 184 - 230
Target Start/End: Complemental strand, 37782152 - 37782106
Alignment:
Q  184 atcgaataggtgatggtctgacaatgtgtttataagtgggggcaatc 230  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||    
T  37782152 atcggataggtgatggtctgacaatgtgtttataagtgggggcaatc 37782106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 172 - 229
Target Start/End: Original strand, 9368800 - 9368857
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaat 229  Q
    |||||||||||||||| ||||| |||||  ||||||||||||||||||||||||||||    
T  9368800 taagagtcccacatcggataggagatggcatgacaatgtgtttataagtgggggcaat 9368857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 95380 - 95320
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||| ||||||| ||||||||||  |||||||||||||||||||||||| |||||||    
T  95380 taagagtcacacatcggataggtgatgacctgacaatgtgtttataagtggggacaatcct 95320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 17150347 - 17150287
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    ||||||| | |||||| ||||| |||||||||| |||||||||||||||||||||||||||    
T  17150347 taagagttcaacatcggataggagatggtctgaaaatgtgtttataagtgggggcaatcct 17150287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 24346615 - 24346555
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||||||| |||||  |||| ||||||||||||||||||||||||| ||||||    
T  24346615 taagagtcccacatcggataggacatggcctgacaatgtgtttataagtgggggtaatcct 24346555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 24647666 - 24647726
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||||||| ||||||||||| | |||||||||||||||| ||| |||||||||    
T  24647666 taagagtcccacatcggataggtgatggccggacaatgtgtttataactggtggcaatcct 24647726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 189 - 233
Target Start/End: Complemental strand, 37657034 - 37656990
Alignment:
Q  189 ataggtgatggtctgacaatgtgtttataagtgggggcaatcctt 233  Q
    ||||||||||||||||||||||||||||||||||||| |||||||    
T  37657034 ataggtgatggtctgacaatgtgtttataagtgggggtaatcctt 37656990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 41666871 - 41666811
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||||||| | |||  |||| ||||||||||||||||||||||||||||||||    
T  41666871 taagagtcccacatcggacaggacatggcctgacaatgtgtttataagtgggggcaatcct 41666811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 41667107 - 41667047
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||||||| | |||  |||| ||||||||||||||||||||||||||||||||    
T  41667107 taagagtcccacatcggacaggacatggcctgacaatgtgtttataagtgggggcaatcct 41667047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 172 - 223
Target Start/End: Original strand, 37656585 - 37656636
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtggg 223  Q
    |||||||||||| ||| |||||| ||||||||||||||||||||||||||||    
T  37656585 taagagtcccacgtcggataggtaatggtctgacaatgtgtttataagtggg 37656636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 172 - 225
Target Start/End: Complemental strand, 8081228 - 8081175
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtggggg 225  Q
    |||||||||||||||| |||||  |||| |||||||||||||||||||||||||    
T  8081228 taagagtcccacatcggataggacatggcctgacaatgtgtttataagtggggg 8081175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 172 - 229
Target Start/End: Complemental strand, 13701182 - 13701125
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaat 229  Q
    |||||||||||||||| |||||  ||| || |||||||||||||||||||||||||||    
T  13701182 taagagtcccacatcggataggaaatgatccgacaatgtgtttataagtgggggcaat 13701125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 4481677 - 4481617
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||||||| ||||  | ||| |||||||||||||||||| |||||||||||||    
T  4481677 taagagtcccacatcggatagaagttggcctgacaatgtgtttataaatgggggcaatcct 4481617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 6919308 - 6919248
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    ||||||||||||||| |||| | ||||  |||||||||||||||| |||||||||||||||    
T  6919308 taagagtcccacatcaaataagagatgacctgacaatgtgtttattagtgggggcaatcct 6919248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 19705873 - 19705933
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    ||||||||||||||||  ||||  || | ||||||||||||||||||||||||||||||||    
T  19705873 taagagtcccacatcgggtaggacatagcctgacaatgtgtttataagtgggggcaatcct 19705933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 172 - 224
Target Start/End: Complemental strand, 24269984 - 24269932
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggg 224  Q
    |||||||||||||||| |||||  |||| ||||||||||||||||||||||||    
T  24269984 taagagtcccacatcggataggacatggcctgacaatgtgtttataagtgggg 24269932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 196 - 232
Target Start/End: Original strand, 24528534 - 24528570
Alignment:
Q  196 atggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||||||||||||||||||||||||||||    
T  24528534 atggtctgacaatgtgtttataagtgggggcaatcct 24528570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 176 - 232
Target Start/End: Complemental strand, 30758409 - 30758353
Alignment:
Q  176 agtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||| |||||  |||| ||||||||||||||||||| ||||||||||||    
T  30758409 agtcccacatcggataggacatggcctgacaatgtgtttataagggggggcaatcct 30758353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 181 - 232
Target Start/End: Original strand, 15438856 - 15438907
Alignment:
Q  181 cacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    ||||||| ||| | |||||||||| |||||||||||||||||||||||||||    
T  15438856 cacatcggatatgagatggtctgataatgtgtttataagtgggggcaatcct 15438907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 173 - 231
Target Start/End: Original strand, 15439194 - 15439252
Alignment:
Q  173 aagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcc 231  Q
    ||||||||||||| | ||| | |||||| ||||||||| ||||||||||||||||||||    
T  15439194 aagagtcccacattgcataagagatggtttgacaatgtatttataagtgggggcaatcc 15439252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 172 - 230
Target Start/End: Complemental strand, 17352548 - 17352491
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatc 230  Q
    ||||||||||||||||| || | ||||  ||||||||||||||||||||||||||||||    
T  17352548 taagagtcccacatcga-taagagatgacctgacaatgtgtttataagtgggggcaatc 17352491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 172 - 230
Target Start/End: Complemental strand, 32908832 - 32908774
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatc 230  Q
    ||||||||| |||| ||||||  |||| ||||||||||||||||||||||| |||||||    
T  32908832 taagagtcctacattgaatagaggatgatctgacaatgtgtttataagtggaggcaatc 32908774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 184 - 222
Target Start/End: Original strand, 37781709 - 37781747
Alignment:
Q  184 atcgaataggtgatggtctgacaatgtgtttataagtgg 222  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  37781709 atcggataggtgatggtctgacaatgtgtttataagtgg 37781747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 15590143 - 15590204
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgg-gggcaatcct 232  Q
    |||||||| ||||||||||| | |||||||||||||||  ||||||||||| ||||||||||    
T  15590143 taagagtctcacatcgaatatgagatggtctgacaatggatttataagtggagggcaatcct 15590204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 172 - 225
Target Start/End: Complemental strand, 24346851 - 24346798
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtggggg 225  Q
    |||||||||||||||||||| |  |||| |||||||||| ||||||||||||||    
T  24346851 taagagtcccacatcgaataagacatggcctgacaatgtatttataagtggggg 24346798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 6637807 - 6637867
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    ||||||||||||||||  |||| ||||  |||||||||||| |||||||||| ||||||||    
T  6637807 taagagtcccacatcggttaggagatgacctgacaatgtgtctataagtgggtgcaatcct 6637867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 9368565 - 9368625
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    ||||||||  |||||| ||||| |||||  ||||||||||||||||||||| |||||||||    
T  9368565 taagagtcatacatcggataggagatggcgtgacaatgtgtttataagtggaggcaatcct 9368625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 228
Target Start/End: Original strand, 13296862 - 13296918
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaa 228  Q
    |||||||||| |||||  |||| | |||||||||||| |||||||||||||||||||    
T  13296862 taagagtcccgcatcggttaggagttggtctgacaatttgtttataagtgggggcaa 13296918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 13358371 - 13358431
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||| ||||||  ||||| ||| | ||||||||||||||||||||||||| ||||||    
T  13358371 taagagtctcacatcagataggagattggctgacaatgtgtttataagtgggggtaatcct 13358431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 224
Target Start/End: Original strand, 16293321 - 16293373
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggg 224  Q
    |||||||| |||||| |||||| |||| ||| |||||||||||||||||||||    
T  16293321 taagagtctcacatcaaataggggatgatctaacaatgtgtttataagtgggg 16293373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 169 - 225
Target Start/End: Complemental strand, 18333817 - 18333761
Alignment:
Q  169 tggtaagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtggggg 225  Q
    ||||||||||||||||||  ||||| ||||| ||  |||||||||||||||||||||    
T  18333817 tggtaagagtcccacatcagataggagatggccttgcaatgtgtttataagtggggg 18333761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 232
Target Start/End: Original strand, 21306861 - 21306917
Alignment:
Q  176 agtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||| | |||  |||||||| |||||| |||||||||||||||||||||    
T  21306861 agtcccacatcggacaggacatggtctgccaatgtatttataagtgggggcaatcct 21306917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 232
Target Start/End: Original strand, 21314699 - 21314755
Alignment:
Q  176 agtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||| | |||  |||||||| |||||| |||||||||||||||||||||    
T  21314699 agtcccacatcggacaggacatggtctgccaatgtatttataagtgggggcaatcct 21314755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 26137223 - 26137163
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    ||||||||||||||||||||||  ||| | ||||||  ||||||||| |||||||||||||    
T  26137223 taagagtcccacatcgaataggaaatgatatgacaacatgtttataaatgggggcaatcct 26137163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 224
Target Start/End: Original strand, 29239884 - 29239935
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggg 224  Q
    |||||||| ||||||  |||||||||| |||||||||||||||||||||||||    
T  29239884 taagagtctcacatctgataggtgatg-tctgacaatgtgtttataagtgggg 29239935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 30770163 - 30770103
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||||||| |||||  |||  |||||||||| |||| ||||||||||||||||    
T  30770163 taagagtcccacatcggataggacatgacctgacaatgtttttaaaagtgggggcaatcct 30770103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 230
Target Start/End: Complemental strand, 2062049 - 2061994
Alignment:
Q  175 gagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatc 230  Q
    |||||||||| || ||||   |||| ||||||||||||||||||||||||||||||    
T  2062049 gagtcccacaccggatagaacatggcctgacaatgtgtttataagtgggggcaatc 2061994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 201 - 232
Target Start/End: Complemental strand, 6413511 - 6413480
Alignment:
Q  201 ctgacaatgtgtttataagtgggggcaatcct 232  Q
    ||||||||||||||||||||||||||||||||    
T  6413511 ctgacaatgtgtttataagtgggggcaatcct 6413480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 201 - 232
Target Start/End: Original strand, 24531598 - 24531629
Alignment:
Q  201 ctgacaatgtgtttataagtgggggcaatcct 232  Q
    ||||||||||||||||||||||||||||||||    
T  24531598 ctgacaatgtgtttataagtgggggcaatcct 24531629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 230
Target Start/End: Complemental strand, 17352782 - 17352724
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatc 230  Q
    |||||||||||||||||||  | ||||  || |||||||||||||||||||||| ||||    
T  17352782 taagagtcccacatcgaatgagagatgacctaacaatgtgtttataagtgggggtaatc 17352724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 222
Target Start/End: Original strand, 18885432 - 18885481
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgg 222  Q
    ||||||||||||||||| ||   ||||||||||||||||||||||||||||    
T  18885432 taagagtcccacatcga-taaaagatggtctgacaatgtgtttataagtgg 18885481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 232
Target Start/End: Complemental strand, 30770349 - 30770319
Alignment:
Q  202 tgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||||||||||||||||||||||    
T  30770349 tgacaatgtgtttataagtgggggcaatcct 30770319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 230
Target Start/End: Complemental strand, 31181125 - 31181067
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatc 230  Q
    ||||| |||||||||| ||||||||||   ||||||| |||||||| ||||||||||||    
T  31181125 taagattcccacatcggataggtgatgacttgacaatatgtttatatgtgggggcaatc 31181067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 232
Target Start/End: Original strand, 38976913 - 38976963
Alignment:
Q  182 acatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    ||||||||||||  || |||||||||||||||||||||| ||| |||||||    
T  38976913 acatcgaataggacattgtctgacaatgtgtttataagttgggacaatcct 38976963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 172 - 229
Target Start/End: Complemental strand, 21210035 - 21209978
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaat 229  Q
    ||||||||||||||||  |||| | ||| |||||||| ||||||||||||||| ||||    
T  21210035 taagagtcccacatcggttaggagttggcctgacaatttgtttataagtggggacaat 21209978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 6413770 - 6413711
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||||||| ||| | |||| | ||||||||||||||||||| ||| |||||||    
T  6413770 taagagtcccacatcggatatgagatgat-tgacaatgtgtttataagtagggacaatcct 6413711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 196 - 232
Target Start/End: Original strand, 6637596 - 6637632
Alignment:
Q  196 atggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||| ||||||||||||||||||||||||| ||||||    
T  6637596 atggcctgacaatgtgtttataagtgggggtaatcct 6637632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 224
Target Start/End: Original strand, 8098288 - 8098340
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggg 224  Q
    ||||||||||||||||  |||| | ||| |||||||| |||||||||||||||    
T  8098288 taagagtcccacatcggttaggagttggcctgacaatttgtttataagtgggg 8098340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 24487759 - 24487699
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||| |||||||  |||| | |||||||| ||| |||||||||||||||| ||||||    
T  24487759 taagagtctcacatcggttaggagttggtctgaaaatatgtttataagtgggggtaatcct 24487699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 27133107 - 27133047
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||| |||||||  |||| | ||| |||||||| |||||||||||| ||||||||||    
T  27133107 taagagtctcacatcggttaggagttggcctgacaatttgtttataagtgagggcaatcct 27133047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 53; Significance: 2e-21; HSPs: 58)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 39053043 - 39052983
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  39053043 taagagtcccacatcggataggtgatggcctgacaatgtgtttataagtgggggcaatcct 39052983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 39052651 - 39052591
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||||||  ||||||||||| ||||||||||||||||||||||||||||||||    
T  39052651 taagagtcccacatcagataggtgatggcctgacaatgtgtttataagtgggggcaatcct 39052591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 174 - 232
Target Start/End: Complemental strand, 5590480 - 5590422
Alignment:
Q  174 agagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||||| ||||| ||||||||||||||||||||| ||||||||||||||||    
T  5590480 agagtcccacatcggataggagatggtctgacaatgtgtttacaagtgggggcaatcct 5590422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 172 - 230
Target Start/End: Complemental strand, 24532535 - 24532477
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatc 230  Q
    |||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||    
T  24532535 taagagtcccacatcggataggagatggcctgacaatgtgtttataagtgggggcaatc 24532477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 11232543 - 11232483
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||||||| | |||  |||||||||||||||||||||||||||||||||||||    
T  11232543 taagagtcccacatcggacaggacatggtctgacaatgtgtttataagtgggggcaatcct 11232483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 12317016 - 12317076
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||||||| | |||  |||||||||||||||||||||||||||||||||||||    
T  12317016 taagagtcccacatcggacaggacatggtctgacaatgtgtttataagtgggggcaatcct 12317076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 172 - 233
Target Start/End: Complemental strand, 20094674 - 20094613
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcctt 233  Q
    |||||||||||||||||||||  ||||| ||||||||||||||||| |||||| ||||||||    
T  20094674 taagagtcccacatcgaatagaagatggcctgacaatgtgtttatatgtggggacaatcctt 20094613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 176 - 232
Target Start/End: Complemental strand, 422327 - 422271
Alignment:
Q  176 agtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||| ||||| ||||||||||||||||||||| |||||| |||||||||    
T  422327 agtcccacatcggataggagatggtctgacaatgtgtttaaaagtggaggcaatcct 422271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 11232308 - 11232248
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||||||| | |||  |||| ||||||||||||||||||||||||||||||||    
T  11232308 taagagtcccacatcggacaggacatggcctgacaatgtgtttataagtgggggcaatcct 11232248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 39984784 - 39984844
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||| |||||||| |||| | |||||||||||| |||||||||||||||||||||||    
T  39984784 taagagtctcacatcgattaggagttggtctgacaatttgtttataagtgggggcaatcct 39984844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 180 - 232
Target Start/End: Original strand, 41790637 - 41790689
Alignment:
Q  180 ccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||||||||||  |||||||||||||||||||||||| |||||||    
T  41790637 ccacatcgaataggtgatgacctgacaatgtgtttataagtggggacaatcct 41790689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 173 - 232
Target Start/End: Complemental strand, 29907839 - 29907780
Alignment:
Q  173 aagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    ||||||||||||||| ||| | ||| |||||||||||||||||||||||||| |||||||    
T  29907839 aagagtcccacatcggataagagatagtctgacaatgtgtttataagtggggtcaatcct 29907780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 173 - 232
Target Start/End: Complemental strand, 34236761 - 34236702
Alignment:
Q  173 aagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||| |||||||| ||| | ||||||||||||||||||||||||||||| ||||||||    
T  34236761 aagagtgccacatcggataagagatggtctgacaatgtgtttataagtgggagcaatcct 34236702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 172 - 230
Target Start/End: Complemental strand, 15042784 - 15042726
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatc 230  Q
    |||||||||||||||| ||| |  |||| ||||||||||||||||||||||||||||||    
T  15042784 taagagtcccacatcggatacgacatggcctgacaatgtgtttataagtgggggcaatc 15042726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 172 - 230
Target Start/End: Complemental strand, 29099854 - 29099796
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatc 230  Q
    |||||||| || |||||||||  |||||||||||||||||||||||||||| |||||||    
T  29099854 taagagtctcatatcgaatagaagatggtctgacaatgtgtttataagtggaggcaatc 29099796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 172 - 225
Target Start/End: Complemental strand, 3157674 - 3157621
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtggggg 225  Q
    |||||||||||||||| ||||||||||| ||| |||||| ||||||||||||||    
T  3157674 taagagtcccacatcggataggtgatggcctggcaatgtatttataagtggggg 3157621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 172 - 233
Target Start/End: Original strand, 12688277 - 12688338
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcctt 233  Q
    |||||||||||||| | ||||  ||||  |||||||||||||||||||||||||||||||||    
T  12688277 taagagtcccacattggatagaagatgacctgacaatgtgtttataagtgggggcaatcctt 12688338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 5932063 - 5932003
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||||||  ||||   |||| ||||||||||||||||||||||||||||||||    
T  5932063 taagagtcccacatcagatagtacatggcctgacaatgtgtttataagtgggggcaatcct 5932003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 176 - 228
Target Start/End: Complemental strand, 5932294 - 5932242
Alignment:
Q  176 agtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaa 228  Q
    |||||||||||| |||||  ||||||| |||||||||||||||||||||||||    
T  5932294 agtcccacatcggataggacatggtctaacaatgtgtttataagtgggggcaa 5932242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 196 - 232
Target Start/End: Original strand, 7669635 - 7669671
Alignment:
Q  196 atggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||||||||||||||||||||||||||||    
T  7669635 atggtctgacaatgtgtttataagtgggggcaatcct 7669671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 10449970 - 10450030
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||| ||||||| |||||  |||| ||||||||||||||||||||| ||||||||||    
T  10449970 taagagtctcacatcggataggacatggcctgacaatgtgtttataagtgtgggcaatcct 10450030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 17469788 - 17469848
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    ||||||||||||||||  |||| | ||| |||||||| |||||||||||||||||||||||    
T  17469788 taagagtcccacatcggttaggagttggcctgacaatttgtttataagtgggggcaatcct 17469848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 17477035 - 17477095
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    ||||||||||||||||  |||| | ||| |||||||| |||||||||||||||||||||||    
T  17477035 taagagtcccacatcggttaggagttggcctgacaatttgtttataagtgggggcaatcct 17477095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 19256700 - 19256640
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    ||||||||||||||||  |||| | ||| |||||||| |||||||||||||||||||||||    
T  19256700 taagagtcccacatcggttaggagttggcctgacaatttgtttataagtgggggcaatcct 19256640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 19256934 - 19256874
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    ||||||||||||||||  |||| | ||| |||||||| |||||||||||||||||||||||    
T  19256934 taagagtcccacatcggttaggagttggcctgacaatttgtttataagtgggggcaatcct 19256874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 25325616 - 25325676
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||||||| |||||  |||| || |||||||||||||||||||| ||||||||    
T  25325616 taagagtcccacatcggataggacatggcctaacaatgtgtttataagtgggtgcaatcct 25325676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 28069471 - 28069411
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||||||| ||| |  |||| |||||||||| |||||||||||||||||||||    
T  28069471 taagagtcccacatcggatatgacatggcctgacaatgtatttataagtgggggcaatcct 28069411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 172 - 220
Target Start/End: Original strand, 31197585 - 31197633
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagt 220  Q
    ||||||||| |||||  ||||||||||||||||||||||||||||||||    
T  31197585 taagagtcctacatcagataggtgatggtctgacaatgtgtttataagt 31197633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 31197817 - 31197877
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||||||  ||||||||||| |||||||||||||| ||||||| | |||||||    
T  31197817 taagagtcccacatcagataggtgatggcctgacaatgtgtttgtaagtggagacaatcct 31197877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 35682895 - 35682835
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    ||||||| |||||||| | |||  |||| ||||||||||||||||||||||||||||||||    
T  35682895 taagagttccacatcggacaggacatggcctgacaatgtgtttataagtgggggcaatcct 35682835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 173 - 220
Target Start/End: Complemental strand, 5675847 - 5675800
Alignment:
Q  173 aagagtcccacatcgaataggtgatggtctgacaatgtgtttataagt 220  Q
    |||||||| |||||| |||| |||||||||||||||||||||||||||    
T  5675847 aagagtcctacatcggatagatgatggtctgacaatgtgtttataagt 5675800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 173 - 232
Target Start/End: Original strand, 7729912 - 7729971
Alignment:
Q  173 aagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    ||||||||||||||  ||| | ||||| ||||| ||||||||||||||||||||||||||    
T  7729912 aagagtcccacatcagatatgagatggcctgaccatgtgtttataagtgggggcaatcct 7729971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 173 - 232
Target Start/End: Complemental strand, 38447540 - 38447481
Alignment:
Q  173 aagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||| ||||||| || ||| | ||||| ||||||||||||||||||||||||||||||||    
T  38447540 aagaatcccacaacggataagagatggcctgacaatgtgtttataagtgggggcaatcct 38447481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 172 - 233
Target Start/End: Complemental strand, 5676170 - 5676109
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcctt 233  Q
    ||||||||||||||| |||| ||||||  |||||||||| ||||||| ||| ||||||||||    
T  5676170 taagagtcccacatcaaatatgtgatgacctgacaatgtatttataaatggaggcaatcctt 5676109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 172 - 225
Target Start/End: Original strand, 39960161 - 39960214
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtggggg 225  Q
    |||||||||||||||| ||||| ||||| |||| ||| ||||||||||||||||    
T  39960161 taagagtcccacatcggataggagatggcctgaaaatttgtttataagtggggg 39960214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 232
Target Start/End: Original strand, 8084101 - 8084157
Alignment:
Q  176 agtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||| | |||  || |||||||||||| |||||||||||||||||||||    
T  8084101 agtcccacatcggacaggacatagtctgacaatgtatttataagtgggggcaatcct 8084157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 18004210 - 18004150
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||||||  | |||  |||| |||||||| |||||||||||||||||||||||    
T  18004210 taagagtcccacatcagacaggacatggcctgacaatatgtttataagtgggggcaatcct 18004150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 20301231 - 20301291
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    ||||||| |||||| | ||| | |||||  |||||||||||||||||||||||||||||||    
T  20301231 taagagtaccacattggatatgagatggcttgacaatgtgtttataagtgggggcaatcct 20301291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 21087863 - 21087923
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    ||||||| |||||| | ||| | |||||  |||||||||||||||||||||||||||||||    
T  21087863 taagagtaccacattggatatgagatggcttgacaatgtgtttataagtgggggcaatcct 21087923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 24075420 - 24075360
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    ||||||||||||||||  |||| | ||| |||||| | |||||||||||||||||||||||    
T  24075420 taagagtcccacatcggttaggagttggcctgacactttgtttataagtgggggcaatcct 24075360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 34842648 - 34842708
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||||||   |||| | ||| |||||||| |||||||||||||||||||||||    
T  34842648 taagagtcccacatcagttaggagttggcctgacaatttgtttataagtgggggcaatcct 34842708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 34843087 - 34843147
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    ||||||||||||||||  |||| | |||||| ||||| |||||||||||||| ||||||||    
T  34843087 taagagtcccacatcggttaggagttggtctaacaatttgtttataagtgggagcaatcct 34843147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 36917553 - 36917493
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||| ||||||  |||||| |||| |||||||||| |||||||||||||| ||||||    
T  36917553 taagagtctcacatcagataggtaatggcctgacaatgtatttataagtgggggtaatcct 36917493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 39743499 - 39743559
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    ||||||||||||||||  |||| | ||| |||||||| ||||||||||| |||||||||||    
T  39743499 taagagtcccacatcggttaggagttggcctgacaatttgtttataagttggggcaatcct 39743559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 232
Target Start/End: Original strand, 4828264 - 4828323
Alignment:
Q  173 aagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||||||  |||| | |||  ||||||| |||||||||||||||||||||||    
T  4828264 aagagtcccacatcggttaggagttggcatgacaatttgtttataagtgggggcaatcct 4828323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 232
Target Start/End: Original strand, 5940029 - 5940088
Alignment:
Q  173 aagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    ||||||||||||||| ||  | |||||| ||||||||||||||||| ||||| |||||||    
T  5940029 aagagtcccacatcggatgagagatggtttgacaatgtgtttataaatggggacaatcct 5940088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 231
Target Start/End: Original strand, 8928991 - 8929046
Alignment:
Q  176 agtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcc 231  Q
    ||||| |||||| ||| | ||||| |||||||||||||||||| ||||||||||||    
T  8928991 agtccgacatcggatatgagatggcctgacaatgtgtttataactgggggcaatcc 8929046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 193 - 232
Target Start/End: Complemental strand, 36917350 - 36917311
Alignment:
Q  193 gtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    ||||| |||||||||||||||||||||||| |||||||||    
T  36917350 gtgatagtctgacaatgtgtttataagtggaggcaatcct 36917311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 230
Target Start/End: Original strand, 7669389 - 7669447
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatc 230  Q
    |||||| || |||||| ||||  |||||| |||||| ||||||||||||||||||||||    
T  7669389 taagagccctacatcggatagaagatggtttgacaacgtgtttataagtgggggcaatc 7669447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 233
Target Start/End: Complemental strand, 15042969 - 15042939
Alignment:
Q  203 gacaatgtgtttataagtgggggcaatcctt 233  Q
    |||||||||||||||||||||||||||||||    
T  15042969 gacaatgtgtttataagtgggggcaatcctt 15042939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 232
Target Start/End: Original strand, 20301501 - 20301531
Alignment:
Q  202 tgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||||||||||||||||||||||    
T  20301501 tgacaatgtgtttataagtgggggcaatcct 20301531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 232
Target Start/End: Original strand, 21088133 - 21088163
Alignment:
Q  202 tgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||||||||||||||||||||||    
T  21088133 tgacaatgtgtttataagtgggggcaatcct 21088163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 210
Target Start/End: Complemental strand, 39052808 - 39052770
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgt 210  Q
    |||||||||||||||| ||||||||||| ||||||||||    
T  39052808 taagagtcccacatcggataggtgatggcctgacaatgt 39052770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 172 - 225
Target Start/End: Complemental strand, 3157123 - 3157070
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtggggg 225  Q
    |||||||| ||||||| |||| |||||| |  ||||||||||||||||||||||    
T  3157123 taagagtctcacatcggatagatgatggcccaacaatgtgtttataagtggggg 3157070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 195 - 232
Target Start/End: Original strand, 20515137 - 20515174
Alignment:
Q  195 gatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    ||||| |||||||||||||||||||| |||||||||||    
T  20515137 gatggcctgacaatgtgtttataagtcggggcaatcct 20515174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 224
Target Start/End: Original strand, 12547069 - 12547121
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggg 224  Q
    ||||||||||||||||  |||| | |||||||||||| | |||||||||||||    
T  12547069 taagagtcccacatcggttaggagttggtctgacaatttatttataagtgggg 12547121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 229
Target Start/End: Complemental strand, 36907541 - 36907485
Alignment:
Q  173 aagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaat 229  Q
    ||||||||||| ||  ||| | ||||||||||||||||||| | |||||||||||||    
T  36907541 aagagtcccacgtcagataagagatggtctgacaatgtgttcaaaagtgggggcaat 36907485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 201 - 229
Target Start/End: Original strand, 42584673 - 42584701
Alignment:
Q  201 ctgacaatgtgtttataagtgggggcaat 229  Q
    |||||||||||||||||||||||||||||    
T  42584673 ctgacaatgtgtttataagtgggggcaat 42584701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 53; Significance: 2e-21; HSPs: 57)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 172 - 228
Target Start/End: Original strand, 34992520 - 34992576
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaa 228  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  34992520 taagagtcccacatcggataggtgatggtctgacaatgtgtttataagtgggggcaa 34992576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 35038542 - 35038482
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  35038542 taagagtcccacatcggataggtgatggcctgacaatgtgtttataagtgggggcaatcct 35038482  T

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Target: chr3; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 35038308 - 35038248
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||||||| ||||||||||| ||||||||||||||||||||||||| ||||||    
T  35038308 taagagtcccacatcggataggtgatggcctgacaatgtgtttataagtgggggaaatcct 35038248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 174 - 232
Target Start/End: Original strand, 22729072 - 22729130
Alignment:
Q  174 agagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||||| ||||| ||||||||||||||||||||| ||||||||||||||||    
T  22729072 agagtcccacatcggataggagatggtctgacaatgtgtttacaagtgggggcaatcct 22729130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 38791564 - 38791504
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||||||| ||||| |||||||||||||||| |||||||||| || |||||||    
T  38791564 taagagtcccacatcggataggagatggtctgacaatgtatttataagtgaggacaatcct 38791504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 177 - 232
Target Start/End: Complemental strand, 45138911 - 45138856
Alignment:
Q  177 gtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    ||||||||||| ||| | ||||||||| ||||||||||||||||||||||||||||    
T  45138911 gtcccacatcggataagagatggtctggcaatgtgtttataagtgggggcaatcct 45138856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 167 - 232
Target Start/End: Original strand, 30138029 - 30138094
Alignment:
Q  167 tctggtaagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||| ||||| || || |||| ||||||||||| |||| |||||||||||||||||||||||||||    
T  30138029 tctgctaagaatctcatatcggataggtgatggcctgataatgtgtttataagtgggggcaatcct 30138094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 167 - 232
Target Start/End: Original strand, 30147580 - 30147645
Alignment:
Q  167 tctggtaagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||| ||||| || || |||| ||||||||||| |||| |||||||||||||||||||||||||||    
T  30147580 tctgctaagaatctcatatcggataggtgatggcctgataatgtgtttataagtgggggcaatcct 30147645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 172 - 220
Target Start/End: Original strand, 34992811 - 34992860
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgac-aatgtgtttataagt 220  Q
    |||||||||||||||| ||||||||||||||||| |||||||||||||||    
T  34992811 taagagtcccacatcggataggtgatggtctgacaaatgtgtttataagt 34992860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 172 - 225
Target Start/End: Original strand, 39620296 - 39620349
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtggggg 225  Q
    |||||||| ||||||| ||||||||||  |||||||||||||||||||||||||    
T  39620296 taagagtctcacatcggataggtgatgacctgacaatgtgtttataagtggggg 39620349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 4155529 - 4155589
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||||||| |||||  | || |||||||||||||||||||||||| |||||||    
T  4155529 taagagtcccacatcgcataggacaaggcctgacaatgtgtttataagtggggacaatcct 4155589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 9273165 - 9273225
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    ||||||||||||||||  ||||   |||||||||||| |||||||||||||||||||||||    
T  9273165 taagagtcccacatcggttaggaattggtctgacaatttgtttataagtgggggcaatcct 9273225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 172 - 228
Target Start/End: Original strand, 16239561 - 16239617
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaa 228  Q
    |||||||| ||||||| |||||  |||| ||||||||||||||||||||||||||||    
T  16239561 taagagtctcacatcggataggacatggcctgacaatgtgtttataagtgggggcaa 16239617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 16927063 - 16927003
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||||||| ||||   |||| ||||||||||||||||||||||||| ||||||    
T  16927063 taagagtcccacatcggatagaacatggcctgacaatgtgtttataagtgggggtaatcct 16927003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 20327728 - 20327668
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    ||||| |||||||||| |||||  |||| |||||||||| |||||||||||||||||||||    
T  20327728 taagaatcccacatcggataggacatggcctgacaatgtatttataagtgggggcaatcct 20327668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 20327963 - 20327903
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    ||||||||||||||||  |||| | ||| |||||||| |||||||||||||||||||||||    
T  20327963 taagagtcccacatcggttaggagttggcctgacaatttgtttataagtgggggcaatcct 20327903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 196 - 232
Target Start/End: Original strand, 39269325 - 39269361
Alignment:
Q  196 atggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||||||||||||||||||||||||||||    
T  39269325 atggtctgacaatgtgtttataagtgggggcaatcct 39269361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 54368486 - 54368546
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||||||  ||||  ||||| |||| |||||||||||||||||||||||||||    
T  54368486 taagagtcccacatccgatagaagatggcctgaaaatgtgtttataagtgggggcaatcct 54368546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 231
Target Start/End: Complemental strand, 21809261 - 21809202
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcc 231  Q
    ||||||| |||||||| |||| ||||||||||||||| |  |||||||||||||||||||    
T  21809261 taagagtgccacatcggatagctgatggtctgacaatataattataagtgggggcaatcc 21809202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 172 - 230
Target Start/End: Complemental strand, 17001535 - 17001477
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatc 230  Q
    |||||||| || |||| ||||| | | ||||||||||||||||||||||||||||||||    
T  17001535 taagagtcacatatcggataggagttcgtctgacaatgtgtttataagtgggggcaatc 17001477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 172 - 226
Target Start/End: Complemental strand, 19954332 - 19954278
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggc 226  Q
    |||||||||||||||  ||||| |||||||||||||| ||||||||||| |||||    
T  19954332 taagagtcccacatcttataggagatggtctgacaatatgtttataagtaggggc 19954278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 175 - 224
Target Start/End: Complemental strand, 13741213 - 13741164
Alignment:
Q  175 gagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggg 224  Q
    ||||||||| || |||||| |||||| |||||||||||||||||||||||    
T  13741213 gagtcccacttcaaataggagatggtttgacaatgtgtttataagtgggg 13741164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 39683382 - 39683321
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttat-aagtgggggcaatcct 232  Q
    |||||||||||||||| |||| |||||  |||||||||||||||| |||||| |||||||||    
T  39683382 taagagtcccacatcggatagatgatgacctgacaatgtgtttataaagtggaggcaatcct 39683321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 11589755 - 11589815
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||| |||||||  |||| | ||| |||||||| |||||||||||||||||||||||    
T  11589755 taagagtctcacatcggttaggagttggcctgacaatttgtttataagtgggggcaatcct 11589815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 20303178 - 20303118
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    ||||| |||||||||| ||| |  |||| |||||||||| |||||||||||||||||||||    
T  20303178 taagaatcccacatcggatatgacatggcctgacaatgtatttataagtgggggcaatcct 20303118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 23691306 - 23691246
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    ||||||||||||||||  |||| | | | |||||||| |||||||||||||||||||||||    
T  23691306 taagagtcccacatcggttaggagttagcctgacaatttgtttataagtgggggcaatcct 23691246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 23708106 - 23708046
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    ||||||||||||||||  |||| | | | |||||||| |||||||||||||||||||||||    
T  23708106 taagagtcccacatcggttaggagttagcctgacaatttgtttataagtgggggcaatcct 23708046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 23708338 - 23708278
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||||||   |||| | | |||||||||| |||||||||||||||||||||||    
T  23708338 taagagtcccacatcagttaggagttagtctgacaatttgtttataagtgggggcaatcct 23708278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 23726562 - 23726502
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    ||||||||||||||||  |||| | | | |||||||| |||||||||||||||||||||||    
T  23726562 taagagtcccacatcggttaggagttagcctgacaatttgtttataagtgggggcaatcct 23726502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 23726794 - 23726734
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||||||   |||| | | |||||||||| |||||||||||||||||||||||    
T  23726794 taagagtcccacatcagttaggagttagtctgacaatttgtttataagtgggggcaatcct 23726734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 23745018 - 23744958
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    ||||||||||||||||  |||| | | | |||||||| |||||||||||||||||||||||    
T  23745018 taagagtcccacatcggttaggagttagcctgacaatttgtttataagtgggggcaatcct 23744958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 23745250 - 23745190
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||||||   |||| | | |||||||||| |||||||||||||||||||||||    
T  23745250 taagagtcccacatcagttaggagttagtctgacaatttgtttataagtgggggcaatcct 23745190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 24063543 - 24063483
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    ||||||||||||||||  |||| | | | |||||||| |||||||||||||||||||||||    
T  24063543 taagagtcccacatcggttaggagttagcctgacaatttgtttataagtgggggcaatcct 24063483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 216
Target Start/End: Original strand, 27086557 - 27086601
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttat 216  Q
    |||||||||||||||  ||||||||||| ||||||||||||||||    
T  27086557 taagagtcccacatcagataggtgatggcctgacaatgtgtttat 27086601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 54368692 - 54368752
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    ||||||||| |||||| ||||  ||||| |||||||||| ||||||||||| |||||||||    
T  54368692 taagagtccaacatcggatagaagatggcctgacaatgtatttataagtggtggcaatcct 54368752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 54567862 - 54567922
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    ||||||||| | |||| |||||  |||| ||||||||||||||||||||||||| ||||||    
T  54567862 taagagtcctatatcggataggacatggcctgacaatgtgtttataagtgggggaaatcct 54567922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 202 - 233
Target Start/End: Complemental strand, 472144 - 472113
Alignment:
Q  202 tgacaatgtgtttataagtgggggcaatcctt 233  Q
    ||||||||||||||||||||||||||||||||    
T  472144 tgacaatgtgtttataagtgggggcaatcctt 472113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 232
Target Start/End: Complemental strand, 30179821 - 30179762
Alignment:
Q  173 aagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    ||||||||||||||  ||| | ||||  ||||||||||||||||||||||||| ||||||    
T  30179821 aagagtcccacatcagataagagatgacctgacaatgtgtttataagtgggggtaatcct 30179762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 232
Target Start/End: Complemental strand, 50083186 - 50083135
Alignment:
Q  181 cacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    ||||||| ||| ||||||| | ||||||||||||||||||||||| ||||||    
T  50083186 cacatcggataagtgatggcccgacaatgtgtttataagtgggggaaatcct 50083135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 46794028 - 46794074
Alignment:
Q  176 agtcccacatcgaataggtgatggtctgacaatgtgtttataagtgg 222  Q
    ||||| |||||| ||| | ||||||||||||||||||||||||||||    
T  46794028 agtcctacatcggataagagatggtctgacaatgtgtttataagtgg 46794074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 195 - 232
Target Start/End: Original strand, 1800208 - 1800245
Alignment:
Q  195 gatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||| ||| |||||||||||||||||||||    
T  1800208 gatggtctgacagtgtatttataagtgggggcaatcct 1800245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 172 - 225
Target Start/End: Original strand, 4008655 - 4008708
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtggggg 225  Q
    |||||||| | ||||| ||||||||||| |||||||| ||||||||| ||||||    
T  4008655 taagagtctcgcatcggataggtgatggcctgacaatatgtttataaatggggg 4008708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 173 - 218
Target Start/End: Complemental strand, 11659795 - 11659750
Alignment:
Q  173 aagagtcccacatcgaataggtgatggtctgacaatgtgtttataa 218  Q
    ||||||| ||||||||||| | |||| |||||||||||||||||||    
T  11659795 aagagtctcacatcgaataagagatgatctgacaatgtgtttataa 11659750  T

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Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 199 - 232
Target Start/End: Complemental strand, 23691511 - 23691478
Alignment:
Q  199 gtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||| |||||||||||||||||||||||    
T  23691511 gtctgacaatttgtttataagtgggggcaatcct 23691478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 199 - 232
Target Start/End: Complemental strand, 24063748 - 24063715
Alignment:
Q  199 gtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||| |||||||||||||||||||||||    
T  24063748 gtctgacaatttgtttataagtgggggcaatcct 24063715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 201 - 230
Target Start/End: Original strand, 27783062 - 27783091
Alignment:
Q  201 ctgacaatgtgtttataagtgggggcaatc 230  Q
    ||||||||||||||||||||||||||||||    
T  27783062 ctgacaatgtgtttataagtgggggcaatc 27783091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 172 - 233
Target Start/End: Original strand, 52994748 - 52994809
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcctt 233  Q
    |||| ||| |||||||||||||  ||| ||||||||||||||||||||| | | ||||||||    
T  52994748 taagtgtctcacatcgaataggacatgatctgacaatgtgtttataagttgagacaatcctt 52994809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 1723189 - 1723130
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    ||||||||||||||||  |||  | ||| |||||||| |||||||||||||||||||||||    
T  1723189 taagagtcccacatcggttaga-gttggcctgacaatttgtttataagtgggggcaatcct 1723130  T

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Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 204 - 232
Target Start/End: Original strand, 1800039 - 1800067
Alignment:
Q  204 acaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||||||||||||||||||||    
T  1800039 acaatgtgtttataagtgggggcaatcct 1800067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 2123777 - 2123837
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||| ||| ||| |||||  ||| ||||| |||||||||||||||| ||||||||||    
T  2123777 taagagtctcacgtcggataggacatgatctgataatgtgtttataagtgagggcaatcct 2123837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 224
Target Start/End: Complemental strand, 3975472 - 3975420
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggg 224  Q
    |||||||| | ||||| |||||||||   ||||||||||||||||||||||||    
T  3975472 taagagtcacgcatcggataggtgataacctgacaatgtgtttataagtgggg 3975420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 4155294 - 4155354
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||||||| ||| |  |||| | ||||  ||||||||||||||||||||||||    
T  4155294 taagagtcccacatcggatatgacatggccagacagcgtgtttataagtgggggcaatcct 4155354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 6487447 - 6487387
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    ||||||||||||||||  |||| | ||| |||||||| ||||||||||||| || ||||||    
T  6487447 taagagtcccacatcggttaggagttggcctgacaatttgtttataagtggaggtaatcct 6487387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 14839851 - 14839791
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||  ||||||  |||| ||||||||||| ||||| ||||||||| |||||||||||    
T  14839851 taagagtttcacatcagatagttgatggtctgataatgtatttataagttggggcaatcct 14839791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 232
Target Start/End: Original strand, 18757816 - 18757872
Alignment:
Q  176 agtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||| ||||| | ||  ||||| |||||||||||||||||||| |||||    
T  18757816 agtcccacatcggataggagttgacctgactatgtgtttataagtgggggcgatcct 18757872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 198 - 230
Target Start/End: Original strand, 33640277 - 33640309
Alignment:
Q  198 ggtctgacaatgtgtttataagtgggggcaatc 230  Q
    ||||||||||||||||||||||||||| |||||    
T  33640277 ggtctgacaatgtgtttataagtggggacaatc 33640309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 232
Target Start/End: Complemental strand, 45139081 - 45139025
Alignment:
Q  176 agtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||  ||| | ||||| ||||||| ||||| ||||||||||||||||||    
T  45139081 agtcccacatctgataagagatggcctgacaacgtgttaataagtgggggcaatcct 45139025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 53; Significance: 2e-21; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 17719370 - 17719430
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  17719370 taagagtcccacatcggataggtgatggcctgacaatgtgtttataagtgggggcaatcct 17719430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 167 - 232
Target Start/End: Complemental strand, 40379563 - 40379498
Alignment:
Q  167 tctggtaagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||| |||||||||||||||| ||||||||||| |||||| |||||||||||||||||||||||||    
T  40379563 tctgttaagagtcccacatcggataggtgatggcctgacagtgtgtttataagtgggggcaatcct 40379498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 94134 - 94074
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||||||| ||||||||||| |||||| |||||||||||||||||||||||||    
T  94134 taagagtcccacatcggataggtgatggcctgacagtgtgtttataagtgggggcaatcct 94074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 16419472 - 16419532
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||||||| |||||  |||||||||||||||||||||||||||||||||||||    
T  16419472 taagagtcccacatcggataggacatggtctgacaatgtgtttataagtgggggcaatcct 16419532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 40379323 - 40379263
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||||||| ||||||||||| |||||| |||||||||||||||||||||||||    
T  40379323 taagagtcccacatcggataggtgatggcctgacagtgtgtttataagtgggggcaatcct 40379263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 12343864 - 12343804
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||||||| ||||| ||||||| ||||||||| ||||||||||||||||||||    
T  12343864 taagagtcccacatcggataggagatggtcagacaatgtgcttataagtgggggcaatcct 12343804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 16533517 - 16533577
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    ||||||||| ||| || ||||||||||| ||||||||||||||||||||||||||||||||    
T  16533517 taagagtcctacaccggataggtgatggcctgacaatgtgtttataagtgggggcaatcct 16533577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 93236 - 93177
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||||||| ||||||||||  ||||||||||||||||||||||||||| ||||    
T  93236 taagagtcccacatcggataggtgatgc-ctgacaatgtgtttataagtgggggcactcct 93177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 2324210 - 2324270
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    ||||||||||||||||  |||| | |||||||||||| |||||||||||||||||||||||    
T  2324210 taagagtcccacatcggttaggagttggtctgacaatttgtttataagtgggggcaatcct 2324270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 5711553 - 5711493
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||||||| | |||  |||| ||||||||||||||||||||||||||||||||    
T  5711553 taagagtcccacatcggaaaggaaatggcctgacaatgtgtttataagtgggggcaatcct 5711493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 17525452 - 17525392
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||||||| | | |  |||||||||||||||||||||||||||||||||||||    
T  17525452 taagagtcccacatcggacatgacatggtctgacaatgtgtttataagtgggggcaatcct 17525392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 33606168 - 33606108
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||||||| ||||| ||||| |||| ||||||||||||||| |||||||||||    
T  33606168 taagagtcccacatcggataggagatggcctgaaaatgtgtttataagtaggggcaatcct 33606108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 37812382 - 37812322
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||||||| |||||  |||| |||||||||||||||||||||||| |||||||    
T  37812382 taagagtcccacatcggataggacatggcctgacaatgtgtttataagtggggacaatcct 37812322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 172 - 231
Target Start/End: Complemental strand, 15124662 - 15124603
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcc 231  Q
    |||||||||||||||| ||||   ||||||||||||| ||||||||||||||||||||||    
T  15124662 taagagtcccacatcggatagaacatggtctgacaatatgtttataagtgggggcaatcc 15124603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 172 - 230
Target Start/End: Complemental strand, 5711789 - 5711731
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatc 230  Q
    |||||||||||||||| | |||  |||| ||||||||||||||||||||||||||||||    
T  5711789 taagagtcccacatcggacaggacatggcctgacaatgtgtttataagtgggggcaatc 5711731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 172 - 225
Target Start/End: Original strand, 21591751 - 21591804
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtggggg 225  Q
    ||||||||||||||||| |||| | |||||||||||| ||||||||||||||||    
T  21591751 taagagtcccacatcgattaggagttggtctgacaatttgtttataagtggggg 21591804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 172 - 229
Target Start/End: Complemental strand, 31700862 - 31700805
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaat 229  Q
    |||||||  ||||||| ||||||||||| ||||||||||||||||||||| |||||||    
T  31700862 taagagttacacatcggataggtgatggcctgacaatgtgtttataagtgagggcaat 31700805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 173 - 230
Target Start/End: Complemental strand, 44404271 - 44404214
Alignment:
Q  173 aagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatc 230  Q
    |||| ||| |||||| |||||||||||||||||||| ||||| |||||||||||||||    
T  44404271 aagaatcctacatcggataggtgatggtctgacaatatgtttgtaagtgggggcaatc 44404214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 2029739 - 2029799
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||||||| |||||  |||  |||||||||||||||||||||| |||||||||    
T  2029739 taagagtcccacatcggataggacatgacctgacaatgtgtttataagtggaggcaatcct 2029799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 4662201 - 4662261
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||||||| |||||  |||  |||||||| |||||||||||||||||||||||    
T  4662201 taagagtcccacatcggataggacatgacctgacaatatgtttataagtgggggcaatcct 4662261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 14466524 - 14466464
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||||||| | |||  |||| ||||||||||||||||||||||| ||||||||    
T  14466524 taagagtcccacatcggacaggacatggcctgacaatgtgtttataagtgggagcaatcct 14466464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 15518730 - 15518790
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||||| | ||||||||  | ||||||||||||||||||||| ||||||||||    
T  15518730 taagagtcccacattggataggtgacagcctgacaatgtgtttataagtgagggcaatcct 15518790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 32884077 - 32884137
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    ||||||||||||||||  |||| | ||| |||||||| |||||||||||||||||||||||    
T  32884077 taagagtcccacatcggttaggagttggcctgacaatttgtttataagtgggggcaatcct 32884137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 37812612 - 37812552
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||||||| ||| |  |||  ||||||||||||||||||||||||||||||||    
T  37812612 taagagtcccacatcggataagacatgacctgacaatgtgtttataagtgggggcaatcct 37812552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 173 - 232
Target Start/End: Original strand, 14927073 - 14927132
Alignment:
Q  173 aagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    ||||||| ||||||| ||| | ||||  ||||||||||||||||||||||||||||||||    
T  14927073 aagagtcacacatcggataagagatgacctgacaatgtgtttataagtgggggcaatcct 14927132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 231
Target Start/End: Complemental strand, 27036526 - 27036467
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcc 231  Q
    ||||||||||||||||  |||| | ||| |||||||| ||||||||||||||||||||||    
T  27036526 taagagtcccacatcggttaggagttggcctgacaatttgtttataagtgggggcaatcc 27036467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 172 - 230
Target Start/End: Complemental strand, 37770057 - 37769999
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatc 230  Q
    ||||||||||||||||  |||| | |||| ||||||| |||||||||||||||||||||    
T  37770057 taagagtcccacatcggttaggagttggtttgacaatttgtttataagtgggggcaatc 37769999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 172 - 230
Target Start/End: Original strand, 37840307 - 37840365
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatc 230  Q
    |||||||||||||| | ||||| ||||  |||||||||||||||||||||| |||||||    
T  37840307 taagagtcccacattggataggagatgacctgacaatgtgtttataagtggaggcaatc 37840365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 172 - 230
Target Start/End: Complemental strand, 42639728 - 42639670
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatc 230  Q
    |||||||||||||| ||||| |  ||||||||||||||||||||||| ||||| |||||    
T  42639728 taagagtcccacattgaatatgacatggtctgacaatgtgtttataaatggggacaatc 42639670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 195 - 232
Target Start/End: Original strand, 9927904 - 9927941
Alignment:
Q  195 gatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  9927904 gatggtctgacaatgtgtttataagtgggggtaatcct 9927941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 191 - 232
Target Start/End: Original strand, 11020547 - 11020588
Alignment:
Q  191 aggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||||| ||||||||||||||||| |||||||||    
T  11020547 aggtgatggtctgaaaatgtgtttataagtggaggcaatcct 11020588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 2324444 - 2324504
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    ||||||||||||||||  |||  | ||| |||||||| |||||||||||||||||||||||    
T  2324444 taagagtcccacatcggttagaagttggcctgacaatttgtttataagtgggggcaatcct 2324504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 5509049 - 5509109
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||| |||||||  |||| | |||||||||||| |||||||||||||||| ||||||    
T  5509049 taagagtcacacatcggttaggagttggtctgacaatttgtttataagtgggggtaatcct 5509109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 15464739 - 15464799
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||  |||||| |||| | |||||||||||||||||| | |||||||||||||||||    
T  15464739 taagagtttcacatcaaatatgagatggtctgacaatgtgtatttaagtgggggcaatcct 15464799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 230
Target Start/End: Complemental strand, 18607121 - 18607065
Alignment:
Q  174 agagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatc 230  Q
    |||||| ||||||  ||||||||||| |||||||||||||||| ||||||| |||||    
T  18607121 agagtctcacatcagataggtgatggcctgacaatgtgtttattagtggggacaatc 18607065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 44404040 - 44403980
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    ||||||||  |||||||||||||||| | |||||||||||||| |||||| | ||||||||    
T  44404040 taagagtcatacatcgaataggtgatagcctgacaatgtgtttgtaagtgagtgcaatcct 44403980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 220
Target Start/End: Original strand, 10523224 - 10523271
Alignment:
Q  173 aagagtcccacatcgaataggtgatggtctgacaatgtgtttataagt 220  Q
    ||||||||||||||| ||| | |||||||||||||||||||| |||||    
T  10523224 aagagtcccacatcggataagagatggtctgacaatgtgtttttaagt 10523271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 195 - 230
Target Start/End: Complemental strand, 25082628 - 25082593
Alignment:
Q  195 gatggtctgacaatgtgtttataagtgggggcaatc 230  Q
    |||||||||||||||||||||||||| |||||||||    
T  25082628 gatggtctgacaatgtgtttataagtaggggcaatc 25082593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 230
Target Start/End: Complemental strand, 17854806 - 17854748
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatc 230  Q
    ||||||||||||||||  |||| | | | |||||||| |||||||||||||||||||||    
T  17854806 taagagtcccacatcggttaggagttagcctgacaatctgtttataagtgggggcaatc 17854748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 232
Target Start/End: Original strand, 32356386 - 32356416
Alignment:
Q  202 tgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||||||||||||||||||||||    
T  32356386 tgacaatgtgtttataagtgggggcaatcct 32356416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 175 - 224
Target Start/End: Original strand, 24395837 - 24395886
Alignment:
Q  175 gagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggg 224  Q
    ||||||||||||  ||||||||||| || ||||||||||||| |||||||    
T  24395837 gagtcccacatcagataggtgatggcctaacaatgtgtttatgagtgggg 24395886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 2029974 - 2030034
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||||||| | | |  |||  |||||||||||||||||||||| |||||||||    
T  2029974 taagagtcccacatcggacatgacatgacctgacaatgtgtttataagtggaggcaatcct 2030034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 3738903 - 3738963
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    ||||||||| |||||| ||||  ||||   ||| |||||||||||||||||||||||||||    
T  3738903 taagagtccaacatcggatagaagatgacatgataatgtgtttataagtgggggcaatcct 3738963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 5509283 - 5509343
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||||||   |||| | ||| | |||||| |||||||||||||||||||||||    
T  5509283 taagagtcccacatcagttaggagttggcccgacaatttgtttataagtgggggcaatcct 5509343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 224
Target Start/End: Complemental strand, 27897719 - 27897667
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggg 224  Q
    ||||||||||||||||  |||| | ||| |||||||| |||||||||||||||    
T  27897719 taagagtcccacatcggttaggagttggcctgacaatttgtttataagtgggg 27897667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 28407907 - 28407847
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    ||||||||||||||||  ||||   ||| || ||||| |||||||||||||||||||||||    
T  28407907 taagagtcccacatcggttaggaattggcctaacaatttgtttataagtgggggcaatcct 28407847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 29718298 - 29718358
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    ||||||||||||||||  |||| | |||  ||||||| |||||||||||| ||||||||||    
T  29718298 taagagtcccacatcggttaggagttggcttgacaatttgtttataagtgagggcaatcct 29718358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 36316165 - 36316105
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||||||   |||  | ||| |||||||| |||||||||||||||||||||||    
T  36316165 taagagtcccacatcagttagaagttggcctgacaatttgtttataagtgggggcaatcct 36316105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 51; Significance: 3e-20; HSPs: 54)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 172 - 230
Target Start/End: Original strand, 3680216 - 3680274
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatc 230  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||    
T  3680216 taagagtcccacatcggatatgtgatggtctgacaatgtgtttataagtgggggcaatc 3680274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 172 - 233
Target Start/End: Original strand, 31961148 - 31961209
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcctt 233  Q
    |||||||||||||||  ||| ||||||| |||||||||||||||||||||||||||||||||    
T  31961148 taagagtcccacatcagatatgtgatggcctgacaatgtgtttataagtgggggcaatcctt 31961209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 223
Target Start/End: Complemental strand, 8567072 - 8567021
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtggg 223  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||||||||    
T  8567072 taagagtcccacctcggataggtgatggtctgacaatgtgtttataagtggg 8567021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 172 - 230
Target Start/End: Complemental strand, 6543057 - 6542999
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatc 230  Q
    ||||||| |||||||| ||| | ||||||||||||||||||||||||||||||||||||    
T  6543057 taagagttccacatcggataagagatggtctgacaatgtgtttataagtgggggcaatc 6542999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 172 - 230
Target Start/End: Original strand, 24554087 - 24554145
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatc 230  Q
    |||||||||||||||| ||||| |||||||||||||| | |||||||||||||||||||    
T  24554087 taagagtcccacatcggataggagatggtctgacaatatatttataagtgggggcaatc 24554145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 167 - 232
Target Start/End: Original strand, 6369429 - 6369494
Alignment:
Q  167 tctggtaagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||| |||||||||||||| | | |||||||| ||| |||||||||||||||||||||||||||||    
T  6369429 tctgttaagagtcccacattggacaggtgatgatctaacaatgtgtttataagtgggggcaatcct 6369494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 2753228 - 2753288
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||||||| | || ||||| |||||||||||||||||||||||||| ||||||    
T  2753228 taagagtcccacatcggaaagatgatgatctgacaatgtgtttataagtgggggtaatcct 2753288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 4868691 - 4868631
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||||||| | |||  |||| ||||||||||||||||||||||||||||||||    
T  4868691 taagagtcccacatcggacaggacatggcctgacaatgtgtttataagtgggggcaatcct 4868631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 172 - 224
Target Start/End: Complemental strand, 12330404 - 12330352
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggg 224  Q
    |||||||||||||||| |||||  |||||||||||||||||||||||||||||    
T  12330404 taagagtcccacatcggataggacatggtctgacaatgtgtttataagtgggg 12330352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 13353171 - 13353231
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||||||| | |||  |||| ||||||||||||||||||||||||||||||||    
T  13353171 taagagtcccacatcggacaggacatggcctgacaatgtgtttataagtgggggcaatcct 13353231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 25065208 - 25065148
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||||||| |||||  ||||||||||||| ||||||||||| |||||||||||    
T  25065208 taagagtcccacatcggataggacatggtctgacaatatgtttataagtaggggcaatcct 25065148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 33796296 - 33796356
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||||||| | |||  |||| ||||||||||||||||||||||||||||||||    
T  33796296 taagagtcccacatcggacaggacatggcctgacaatgtgtttataagtgggggcaatcct 33796356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 171 - 230
Target Start/End: Complemental strand, 12199920 - 12199861
Alignment:
Q  171 gtaagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatc 230  Q
    ||||||||||||||||| ||| |  ||||||||||||| |||||||||||||||||||||    
T  12199920 gtaagagtcccacatcggataagatatggtctgacaatatgtttataagtgggggcaatc 12199861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 172 - 230
Target Start/End: Original strand, 21214955 - 21215013
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatc 230  Q
    |||||||| ||| |||||||||||||||||| |||||||||||||||||  ||||||||    
T  21214955 taagagtcacacgtcgaataggtgatggtctcacaatgtgtttataagtttgggcaatc 21215013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 3679982 - 3680042
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||| ||| ||| ||| ||||| |||||||||||||||||||| |||||||||||||    
T  3679982 taagagtctcacgtcggataagtgatagtctgacaatgtgtttataactgggggcaatcct 3680042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 4868927 - 4868867
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||||||| | |||  |||| ||| ||||||||||||||||||||||||||||    
T  4868927 taagagtcccacatcggacaggacatggcctggcaatgtgtttataagtgggggcaatcct 4868867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 6054373 - 6054433
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    ||||||||| |||||| ||| | ||||||||||||| || |||||||||||||||||||||    
T  6054373 taagagtccaacatcggataagagatggtctgacaaggtatttataagtgggggcaatcct 6054433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 9705224 - 9705284
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||||||| |||||  ||||  | |||||||||||||||||||||||||||||    
T  9705224 taagagtcccacatcggataggacatggcttaacaatgtgtttataagtgggggcaatcct 9705284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 176 - 228
Target Start/End: Complemental strand, 12330289 - 12330237
Alignment:
Q  176 agtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaa 228  Q
    ||||||| |||| |||||  |||||||||||||||||||||||||||||||||    
T  12330289 agtcccagatcggataggacatggtctgacaatgtgtttataagtgggggcaa 12330237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 15600906 - 15600966
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    ||||||||||||||||  |||| | |||||||| ||| |||||||||||||||||||||||    
T  15600906 taagagtcccacatcggttaggagttggtctgataatttgtttataagtgggggcaatcct 15600966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 17147774 - 17147714
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||||||| |||||  |||  |||||||||| |||||||||||||||||||||    
T  17147774 taagagtcccacatcggataggacatgacctgacaatgtatttataagtgggggcaatcct 17147714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 27772916 - 27772976
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    ||||||||||||||||  |||| | ||| |||||||| |||||||||||||||||||||||    
T  27772916 taagagtcccacatcggttaggagttggcctgacaatttgtttataagtgggggcaatcct 27772976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 172 - 224
Target Start/End: Original strand, 30256783 - 30256835
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggg 224  Q
    |||||||||||||||| ||||||||||  |||||||| |||||||||||||||    
T  30256783 taagagtcccacatcggataggtgatgacctgacaatatgtttataagtgggg 30256835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 33494509 - 33494569
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||||||| ||||| |||||  ||| ||| |||||||||||||||||||||||    
T  33494509 taagagtcccacatcggataggagatggcttgaaaatatgtttataagtgggggcaatcct 33494569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 172 - 224
Target Start/End: Original strand, 33494744 - 33494796
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggg 224  Q
    |||||||||||||||| ||||| |||||||||||||| | |||||||||||||    
T  33494744 taagagtcccacatcggataggagatggtctgacaatatatttataagtgggg 33494796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 174 - 232
Target Start/End: Complemental strand, 2736279 - 2736221
Alignment:
Q  174 agagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    ||||||||||||||  |||| ||||  |||||||||||||||||||||||| |||||||    
T  2736279 agagtcccacatcgggtaggagatgacctgacaatgtgtttataagtggggacaatcct 2736221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 172 - 230
Target Start/End: Original strand, 9704990 - 9705048
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatc 230  Q
    |||||||| ||||||| |||||  || | ||||||||||||||||||||||||||||||    
T  9704990 taagagtctcacatcggataggacatagcctgacaatgtgtttataagtgggggcaatc 9705048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 172 - 233
Target Start/End: Complemental strand, 15082022 - 15081961
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcctt 233  Q
    ||||||||||||| ||  |||| ||||| |||||||| |||||| |||||||||||||||||    
T  15082022 taagagtcccacaacggttaggagatggactgacaatatgtttacaagtgggggcaatcctt 15081961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 176 - 229
Target Start/End: Complemental strand, 15103041 - 15102988
Alignment:
Q  176 agtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaat 229  Q
    |||| ||||||| ||||||||||  ||||||||||||||||||| |||||||||    
T  15103041 agtctcacatcggataggtgatgacctgacaatgtgtttataagcgggggcaat 15102988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 4906776 - 4906836
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    ||||||| |||||||| ||| | ||| ||| ||||||||||||||||||| ||||||||||    
T  4906776 taagagttccacatcggataagagattgtcggacaatgtgtttataagtgagggcaatcct 4906836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 6237816 - 6237756
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||||| | ||| |||| || |||||||||| |||||||||| ||||||||||    
T  6237816 taagagtcccacattggataagtgaaggcctgacaatgtatttataagtgagggcaatcct 6237756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 224
Target Start/End: Complemental strand, 6542822 - 6542770
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggg 224  Q
    |||||||| ||||||| ||||| |||||||||||||| ||||||||| |||||    
T  6542822 taagagtctcacatcggataggagatggtctgacaatctgtttataaatgggg 6542770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 12330058 - 12329998
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||||||| ||| |  ||| | | |||||||||||||||||||||||||||||    
T  12330058 taagagtcccacatcggataagatatgatataacaatgtgtttataagtgggggcaatcct 12329998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 13740886 - 13740946
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    ||||||| |||||||| ||| ||| ||| |||||||| |||||||||||||| ||||||||    
T  13740886 taagagttccacatcggatatgtgttggcctgacaatttgtttataagtgggagcaatcct 13740946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 13746386 - 13746446
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    ||||||| |||||||| ||| ||| ||| |||||||| |||||||||||||| ||||||||    
T  13746386 taagagttccacatcggatatgtgttggcctgacaatttgtttataagtgggagcaatcct 13746446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 21690692 - 21690752
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    ||||||||||||||||  ||||   ||| |||||||| |||||||||||||||||||||||    
T  21690692 taagagtcccacatcggttaggatttggcctgacaatttgtttataagtgggggcaatcct 21690752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 27653187 - 27653247
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    ||||||||||||||||  |||| | ||| |||||||| |||||||||||||||| ||||||    
T  27653187 taagagtcccacatcggttaggagttggcctgacaatttgtttataagtgggggaaatcct 27653247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 27656428 - 27656488
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    ||||||||||||||||  |||| | ||| |||||||| |||||||||||||||| ||||||    
T  27656428 taagagtcccacatcggttaggagttggcctgacaatttgtttataagtgggggaaatcct 27656488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 27772684 - 27772744
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    ||||| ||||||||||  |||| | ||| |||||||| |||||||||||||||||||||||    
T  27772684 taagattcccacatcggttaggagttggcctgacaatttgtttataagtgggggcaatcct 27772744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 229
Target Start/End: Complemental strand, 16722918 - 16722864
Alignment:
Q  175 gagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaat 229  Q
    ||||||||||||| ||| ||||||| |||| ||| |||||||||||||| |||||    
T  16722918 gagtcccacatcggatatgtgatggcctgataatctgtttataagtgggagcaat 16722864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 172 - 229
Target Start/End: Complemental strand, 2736516 - 2736459
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaat 229  Q
    ||||||| |||||||| ||| | ||||  |||| ||||||||||||||||||||||||    
T  2736516 taagagttccacatcggatatgagatgacctgataatgtgtttataagtgggggcaat 2736459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 172 - 229
Target Start/End: Complemental strand, 2737284 - 2737227
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaat 229  Q
    ||||||| |||||||| ||| | ||||  |||| ||||||||||||||||||||||||    
T  2737284 taagagttccacatcggatatgagatgacctgataatgtgtttataagtgggggcaat 2737227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 172 - 229
Target Start/End: Original strand, 19712922 - 19712979
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaat 229  Q
    ||||||| ||||||||  |||| | ||| |||||||| ||||||||||||||||||||    
T  19712922 taagagttccacatcggttaggagttggcctgacaatttgtttataagtgggggcaat 19712979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 30505707 - 30505768
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttat-aagtgggggcaatcct 232  Q
    |||||||||||||||| |||   |||||||||||||||||||| | |||||||| |||||||    
T  30505707 taagagtcccacatcggatataagatggtctgacaatgtgtttgtaaagtggggacaatcct 30505768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 183 - 232
Target Start/End: Complemental strand, 33631907 - 33631858
Alignment:
Q  183 catcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    ||||| ||||||||||  |||||||||||||||||||||||  |||||||    
T  33631907 catcggataggtgatgacctgacaatgtgtttataagtgggaacaatcct 33631858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 232
Target Start/End: Original strand, 6065968 - 6066005
Alignment:
Q  193 gtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    ||||||||||||||||||||||||||  ||||||||||||    
T  6065968 gtgatggtctgacaatgtgtttataa--gggggcaatcct 6066005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 196 - 232
Target Start/End: Complemental strand, 6400710 - 6400674
Alignment:
Q  196 atggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||| |||||||||||||||||||||| |||||||||    
T  6400710 atggcctgacaatgtgtttataagtggaggcaatcct 6400674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 6400960 - 6400900
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||||||| | | |  |||| |||||||| ||||||||||||| |||||||||    
T  6400960 taagagtcccacatcggacatgacatggcctgacaatatgtttataagtggaggcaatcct 6400900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 7638704 - 7638644
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||| ||| ||  ||||| ||||  |||| |||||||||||||||||||||||||||    
T  7638704 taagagtctcacgtcagataggagatgacctgataatgtgtttataagtgggggcaatcct 7638644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 8026359 - 8026419
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||| |||  || | | ||| |||||||| |||||||||||||||||||||||    
T  8026359 taagagtcccacgtcggttatgagttggcctgacaatttgtttataagtgggggcaatcct 8026419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 196 - 232
Target Start/End: Original strand, 13740675 - 13740711
Alignment:
Q  196 atggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    ||||||||||||||||||||||||||| | |||||||    
T  13740675 atggtctgacaatgtgtttataagtggagacaatcct 13740711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 196 - 232
Target Start/End: Original strand, 13746175 - 13746211
Alignment:
Q  196 atggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    ||||||||||||||||||||||||||| | |||||||    
T  13746175 atggtctgacaatgtgtttataagtggagacaatcct 13746211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 196 - 232
Target Start/End: Complemental strand, 19639203 - 19639167
Alignment:
Q  196 atggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||| |||||||||||||||||||||||| |||||||    
T  19639203 atggcctgacaatgtgtttataagtggggacaatcct 19639167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 196 - 232
Target Start/End: Original strand, 30256572 - 30256608
Alignment:
Q  196 atggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    ||||| ||||||||||||||||| |||||||||||||    
T  30256572 atggtttgacaatgtgtttataactgggggcaatcct 30256608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 12 - 108
Target Start/End: Complemental strand, 4274 - 4177
Alignment:
Q  12 aagcatagggaatgaagagaagatttcatgtgaaagagaacttggcagaaaggtggacatggcttaagctttggtttt-tgttgagtgataaaaacca 108  Q
    |||||||||||||||| ||||| ||||||| |||||||||| | | ||||||||||||||||||||||||||  |||| |||| | ||||||||||||    
T  4274 aagcatagggaatgaatagaagctttcatgcgaaagagaacattgtagaaaggtggacatggcttaagctttaattttctgtttaatgataaaaacca 4177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 1e-19; HSPs: 56)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 159 - 232
Target Start/End: Complemental strand, 26240043 - 26239970
Alignment:
Q  159 cattgacatctggtaagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    ||||||||| || ||||||||| |||||| |||||  |||||||||||||||||||||||||||||||||||||    
T  26240043 cattgacatgtgttaagagtccgacatcggataggacatggtctgacaatgtgtttataagtgggggcaatcct 26239970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 3519839 - 3519779
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||||||| ||||||||||| ||||||||||||||||||||||||| ||||||    
T  3519839 taagagtcccacatcggataggtgatggcctgacaatgtgtttataagtgggggtaatcct 3519779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 48243551 - 48243491
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||||| ||||| ||||||| ||||||||||||||||||||||||||||||||    
T  48243551 taagagtcccacattgaatatgtgatggcctgacaatgtgtttataagtgggggcaatcct 48243491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 181 - 232
Target Start/End: Complemental strand, 3520145 - 3520094
Alignment:
Q  181 cacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  3520145 cacatcggataggtgatggtctgacaatgtgtttataagtgggggcaatcct 3520094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 172 - 233
Target Start/End: Complemental strand, 43688273 - 43688212
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcctt 233  Q
    |||||||||||||||| |||||  |||| |||||||||||||||||||||||||||||||||    
T  43688273 taagagtcccacatcggataggacatggcctgacaatgtgtttataagtgggggcaatcctt 43688212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 2404288 - 2404228
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    ||||||||||||||||  |||| ||||| ||||||||||||||||||||||||||||||||    
T  2404288 taagagtcccacatcggttaggagatggactgacaatgtgtttataagtgggggcaatcct 2404228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 3038198 - 3038138
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||||||||||| | ||| |||| |||||||||||||||||||||||||||||    
T  3038198 taagagtcccacatcgaataagagattgtctaacaatgtgtttataagtgggggcaatcct 3038138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 9689204 - 9689144
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||||||| |||||||||||| |||||||||| ||||||||||||| ||||||    
T  9689204 taagagtcccacatcggataggtgatggtttgacaatgtgcttataagtgggggaaatcct 9689144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 21055067 - 21055007
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    ||||||||||| |||| ||||||||||| |||||||| |||||||||||||||||||||||    
T  21055067 taagagtcccatatcggataggtgatggcctgacaatatgtttataagtgggggcaatcct 21055007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 47710413 - 47710473
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||| ||||||| ||||||||||| || |||||||||||||||||||||||||||||    
T  47710413 taagagtctcacatcggataggtgatggccttacaatgtgtttataagtgggggcaatcct 47710473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 47722069 - 47722129
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||| ||||||| ||||||||||| || |||||||||||||||||||||||||||||    
T  47722069 taagagtctcacatcggataggtgatggccttacaatgtgtttataagtgggggcaatcct 47722129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 177 - 230
Target Start/End: Complemental strand, 32278994 - 32278941
Alignment:
Q  177 gtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatc 230  Q
    ||||||||||| ||| |||||||||||||||||||||||||||||||| |||||    
T  32278994 gtcccacatcggatatgtgatggtctgacaatgtgtttataagtggggacaatc 32278941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 48243173 - 48243115
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||||||  |||  |||||||||||||||||||||||||||||||||||||||    
T  48243173 taagagtcccacatcagata--tgatggtctgacaatgtgtttataagtgggggcaatcct 48243115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 172 - 224
Target Start/End: Original strand, 3392952 - 3393004
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggg 224  Q
    |||||||| ||||||| ||||||||||| ||||||||||||||||||||||||    
T  3392952 taagagtctcacatcggataggtgatggcctgacaatgtgtttataagtgggg 3393004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 4267824 - 4267884
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    ||||||||||||||||  |||| | |||||||||||| |||||||||||||||||||||||    
T  4267824 taagagtcccacatcggttaggagttggtctgacaatttgtttataagtgggggcaatcct 4267884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 29469575 - 29469635
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||||||| | |||  |||| ||||||||||||||||||||||||||||||||    
T  29469575 taagagtcccacatcggacaggacatggcctgacaatgtgtttataagtgggggcaatcct 29469635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 29469810 - 29469870
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||||||| | |||  |||| ||||||||||||||||||||||||||||||||    
T  29469810 taagagtcccacatcggacaggacatggcctgacaatgtgtttataagtgggggcaatcct 29469870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 31485538 - 31485478
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    ||||||||||||||   ||| ||||||| ||||||||||||||||||||||||||||||||    
T  31485538 taagagtcccacataagatatgtgatggcctgacaatgtgtttataagtgggggcaatcct 31485478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 42985237 - 42985177
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||| ||||||| ||| |||||||| ||||||||||||||||||||| |||||||||    
T  42985237 taagagtctcacatcggatatgtgatggtttgacaatgtgtttataagtggaggcaatcct 42985177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 172 - 230
Target Start/End: Complemental strand, 2544329 - 2544271
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatc 230  Q
    ||||||||||||||||  |||| | |||||||||||| |||||||||||||||||||||    
T  2544329 taagagtcccacatcggttaggagttggtctgacaatttgtttataagtgggggcaatc 2544271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 195 - 232
Target Start/End: Original strand, 4454769 - 4454806
Alignment:
Q  195 gatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    ||||||||||||||||||||||||||||||||||||||    
T  4454769 gatggtctgacaatgtgtttataagtgggggcaatcct 4454806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 1596564 - 1596624
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||||||| | |||  |||| ||||||||||||| ||||||||||||||||||    
T  1596564 taagagtcccacatcggacaggacatggcctgacaatgtgttaataagtgggggcaatcct 1596624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 2404522 - 2404462
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||| ||| ||||| || || |||||||||||||||||||| |||||||||||    
T  2404522 taagagtcccacgtcggataggagacggactgacaatgtgtttataagtaggggcaatcct 2404462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 6001549 - 6001489
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||||||| ||||  ||||  |||||||| |||||||||||||||||||||||    
T  6001549 taagagtcccacatcggatagaagatgacctgacaatatgtttataagtgggggcaatcct 6001489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 21861264 - 21861324
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||||||| | |||  |||| ||||||||||||||||||||| ||||||||||    
T  21861264 taagagtcccacatcggacaggacatggcctgacaatgtgtttataagtgagggcaatcct 21861324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 21861499 - 21861559
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    ||||||| |||||||| | |||  |||| ||||||||||||||||||||||||||||||||    
T  21861499 taagagttccacatcggacaggacatggcctgacaatgtgtttataagtgggggcaatcct 21861559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 172 - 212
Target Start/End: Original strand, 33834396 - 33834436
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgt 212  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  33834396 taagagtcccacatcggataggtgatggtctgacaatgtgt 33834436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 44874460 - 44874400
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||||||| ||||| |||   ||||||||||||||||||||||||| ||||||    
T  44874460 taagagtcccacatcggataggagataacctgacaatgtgtttataagtgggggaaatcct 44874400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 172 - 230
Target Start/End: Original strand, 5522849 - 5522907
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatc 230  Q
    |||||||||||||||| ||| | | |||||||||||||||||| |||||||| ||||||    
T  5522849 taagagtcccacatcgtataagagttggtctgacaatgtgtttttaagtgggagcaatc 5522907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 172 - 229
Target Start/End: Complemental strand, 2315140 - 2315084
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaat 229  Q
    ||||| |||||||| |||||| ||||| |||||||||||||||| |||||||||||||    
T  2315140 taagattcccacattgaatagctgatg-tctgacaatgtgtttagaagtgggggcaat 2315084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 172 - 229
Target Start/End: Complemental strand, 2315384 - 2315327
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaat 229  Q
    ||||| |||||||||||||| ||||||||||||| |||| |||||| |||| ||||||    
T  2315384 taagaatcccacatcgaatatgtgatggtctgactatgtatttatatgtggaggcaat 2315327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 172 - 225
Target Start/End: Complemental strand, 18826602 - 18826549
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtggggg 225  Q
    |||||||||||||| | ||||| ||||  |||||||||||||||||||||||||    
T  18826602 taagagtcccacattggataggagatgacctgacaatgtgtttataagtggggg 18826549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 1596798 - 1596858
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||||||| | |||  |||| || ||||||| |||||||||||||||||||||    
T  1596798 taagagtcccacatcggacaggacatggcctaacaatgtttttataagtgggggcaatcct 1596858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 2544561 - 2544501
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||| |||  |||| | ||| |||||||| |||||||||||||||||||||||    
T  2544561 taagagtcccacgtcggttaggagttggcctgacaatttgtttataagtgggggcaatcct 2544501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 6634825 - 6634885
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||| |||||||  |||| | ||| |||||||| |||||||||||||||||||||||    
T  6634825 taagagtctcacatcggttaggagttggcctgacaatttgtttataagtgggggcaatcct 6634885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 224
Target Start/End: Original strand, 9625383 - 9625435
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggg 224  Q
    ||||||| |||||| | |||||||||||||||||||| | |||||||||||||    
T  9625383 taagagttccacattggataggtgatggtctgacaatatatttataagtgggg 9625435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 33996193 - 33996133
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||||||| ||| |  || ||||||||||||||||||| |||||| |||||||    
T  33996193 taagagtcccacatcggataagacattgtctgacaatgtgtttatacgtggggacaatcct 33996133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 34027363 - 34027423
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    ||||| ||||||||||  |||| | ||| |||||||| |||||||||||||||||||||||    
T  34027363 taagaatcccacatcggttaggagttggcctgacaatttgtttataagtgggggcaatcct 34027423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 196 - 232
Target Start/End: Complemental strand, 36277316 - 36277280
Alignment:
Q  196 atggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||| ||||||||||||||||||||||||||||||||    
T  36277316 atggcctgacaatgtgtttataagtgggggcaatcct 36277280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 221
Target Start/End: Complemental strand, 36993416 - 36993368
Alignment:
Q  173 aagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtg 221  Q
    |||||| ||||||||||||||  ||||||||||||| ||||||||||||    
T  36993416 aagagttccacatcgaataggatatggtctgacaatatgtttataagtg 36993368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 48661669 - 48661609
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||||||  ||||| ||||  |||||||||| |||||| ||||||||||||||    
T  48661669 taagagtcccacatcagataggagatgacctgacaatgtatttataggtgggggcaatcct 48661609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 195 - 230
Target Start/End: Complemental strand, 23796275 - 23796240
Alignment:
Q  195 gatggtctgacaatgtgtttataagtgggggcaatc 230  Q
    |||||||| |||||||||||||||||||||||||||    
T  23796275 gatggtctaacaatgtgtttataagtgggggcaatc 23796240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 201 - 232
Target Start/End: Original strand, 25620135 - 25620166
Alignment:
Q  201 ctgacaatgtgtttataagtgggggcaatcct 232  Q
    ||||||||||||||||||||||||||||||||    
T  25620135 ctgacaatgtgtttataagtgggggcaatcct 25620166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 193 - 232
Target Start/End: Complemental strand, 31485752 - 31485713
Alignment:
Q  193 gtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    ||||||| |||||||||| |||||||||||||||||||||    
T  31485752 gtgatggcctgacaatgtttttataagtgggggcaatcct 31485713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 230
Target Start/End: Original strand, 4268024 - 4268082
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatc 230  Q
    |||||||||||||||   |||| | ||| |||||||| |||||||||||||||||||||    
T  4268024 taagagtcccacatcagttaggagttggcctgacaatttgtttataagtgggggcaatc 4268082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 232
Target Start/End: Complemental strand, 20305775 - 20305717
Alignment:
Q  174 agagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||| | ||||| |||| ||  | |||||||||||||||||||||||||||    
T  20305775 agagtcccacattggataggagatgttccaataatgtgtttataagtgggggcaatcct 20305717  T

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Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 230
Target Start/End: Complemental strand, 26562187 - 26562129
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatc 230  Q
    |||||||| |||||||  |||| | ||| |||||||| |||||||||||||||||||||    
T  26562187 taagagtctcacatcggttaggagttggcctgacaatttgtttataagtgggggcaatc 26562129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 230
Target Start/End: Complemental strand, 31257145 - 31257087
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatc 230  Q
    |||||||| |||||||  |||  | |||||||||||| |||||||||||||||||||||    
T  31257145 taagagtctcacatcggttagaagttggtctgacaatttgtttataagtgggggcaatc 31257087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 230
Target Start/End: Complemental strand, 33996425 - 33996367
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatc 230  Q
    |||||||||||||||| |||||  |||| || | ||||| |||||||||||||||||||    
T  33996425 taagagtcccacatcggataggacatggcctaataatgtatttataagtgggggcaatc 33996367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 172 - 229
Target Start/End: Original strand, 17202149 - 17202206
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaat 229  Q
    ||||||||||||||||  || | | ||| |||||||| ||||||||||||||||||||    
T  17202149 taagagtcccacatcggttaagagttggcctgacaatttgtttataagtgggggcaat 17202206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 172 - 233
Target Start/End: Complemental strand, 31257381 - 31257320
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcctt 233  Q
    |||| ||| |||||||  |||| | |||||||||||| | ||||||||||||||||||||||    
T  31257381 taagcgtctcacatcggttaggagttggtctgacaatttatttataagtgggggcaatcctt 31257320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 191 - 232
Target Start/End: Complemental strand, 32279161 - 32279120
Alignment:
Q  191 aggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||| |||||||||||||||||||||| || |||||||    
T  32279161 aggtgatgatctgacaatgtgtttataagtgtggacaatcct 32279120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 9688984 - 9688924
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    ||||||| |||||||| |||| ||||||||||||| ||| ||||| |||||  ||||||||    
T  9688984 taagagttccacatcggatagatgatggtctgacactgtatttatgagtggatgcaatcct 9688924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 34027597 - 34027657
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||||||   |||  | ||| |||||||| |||||||||||||||||||||||    
T  34027597 taagagtcccacatcagttagaagttggcctgacaatttgtttataagtgggggcaatcct 34027657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 230
Target Start/End: Complemental strand, 35308230 - 35308202
Alignment:
Q  202 tgacaatgtgtttataagtgggggcaatc 230  Q
    |||||||||||||||||||||||||||||    
T  35308230 tgacaatgtgtttataagtgggggcaatc 35308202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 41190984 - 41191044
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||||||  ||| |||||  ||||||||| |||||||||||| | ||||||||    
T  41190984 taagagtcccacatcagatatgtgataatctgacaatatgtttataagtgagagcaatcct 41191044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 172 - 224
Target Start/End: Original strand, 14508 - 14560
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggg 224  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  14508 taagagtcccacatcggataggtgatggtctgacaatgtgtttataagtgggg 14560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 179 - 230
Target Start/End: Original strand, 14280 - 14331
Alignment:
Q  179 cccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatc 230  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| |||||    
T  14280 cccacatcggataggtgatggtctgacaatgtgtttataagtggggacaatc 14331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 172 - 227
Target Start/End: Original strand, 429843 - 429898
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggca 227  Q
    |||||||||||||||| ||||||||||| |||||||||||||||||||||||||||    
T  429843 taagagtcccacatcggataggtgatggcctgacaatgtgtttataagtgggggca 429898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 1886 - 1946
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||||||| | |||  |||||||||||||||||||||||||||||||||||||    
T  1886 taagagtcccacatcggacaggacatggtctgacaatgtgtttataagtgggggcaatcct 1946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 2121 - 2181
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||||||| | |||  |||| ||||||||||||||||||||||||||||||||    
T  2121 taagagtcccacatcggacaggacatggcctgacaatgtgtttataagtgggggcaatcct 2181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0766 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0766
Description:

Target: scaffold0766; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 6244 - 6304
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||||||  ||| | ||| ||||||||||||||||||||||||||||||||||    
T  6244 taagagtcccacatcagataagagatagtctgacaatgtgtttataagtgggggcaatcct 6304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0692 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0692
Description:

Target: scaffold0692; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 5868 - 5808
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||||||| ||| |  || ||||||||||||||||||||||||||||||||||    
T  5868 taagagtcccacatcggataagacatagtctgacaatgtgtttataagtgggggcaatcct 5808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0692; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 197 - 232
Target Start/End: Complemental strand, 5633 - 5598
Alignment:
Q  197 tggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||| |||||||||||||||||||||||||||||||    
T  5633 tggtttgacaatgtgtttataagtgggggcaatcct 5598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 12851 - 12911
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||| |||||||||||||||||||||  ||||||||  |||||||||||||||||||||    
T  12851 taagagccccacatcgaataggtgatggcttgacaatgaatttataagtgggggcaatcct 12911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 12617 - 12677
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||  ||| |||||||||||| ||||||||| |||||| ||||||||||||||    
T  12617 taagagtcccatgtcggataggtgatggtttgacaatgtatttatatgtgggggcaatcct 12677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 172 - 225
Target Start/End: Original strand, 3814 - 3867
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtggggg 225  Q
    |||||||||||||||| |||| |||||| ||||||||||||| |||||||||||    
T  3814 taagagtcccacatcggatagctgatggcctgacaatgtgttaataagtggggg 3867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 172 - 225
Target Start/End: Original strand, 4458 - 4511
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtggggg 225  Q
    |||||||||||||||| |||| |||||| ||||||||||||| |||||||||||    
T  4458 taagagtcccacatcggatagctgatggcctgacaatgtgttaataagtggggg 4511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 20545 - 20605
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||||||| | |||  |||| |||||||||||||||||| |||||||||||||    
T  20545 taagagtcccacatcggacaggatatggcctgacaatgtgtttataattgggggcaatcct 20605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 173 - 232
Target Start/End: Complemental strand, 288770 - 288711
Alignment:
Q  173 aagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    ||||||||||||||| ||||| |||||||||||||||| ||||||  |||| ||||||||    
T  288770 aagagtcccacatcggataggagatggtctgacaatgtatttatatctgggcgcaatcct 288711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0459 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 173 - 230
Target Start/End: Original strand, 13072 - 13129
Alignment:
Q  173 aagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatc 230  Q
    |||| ||| |||||| |||||||||||||| ||||| ||||| |||||||||||||||    
T  13072 aagaatcctacatcggataggtgatggtctaacaatatgtttgtaagtgggggcaatc 13129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0459; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 13303 - 13363
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    ||||||||  |||||||||||||||| | |||||||||||||| |||||| | ||||||||    
T  13303 taagagtcatacatcgaataggtgatagcctgacaatgtgtttgtaagtgagtgcaatcct 13363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366 (Bit Score: 34; Significance: 0.0000000004; HSPs: 4)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 173 - 230
Target Start/End: Original strand, 10713 - 10770
Alignment:
Q  173 aagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatc 230  Q
    |||| ||| |||||| |||||||||||||| ||||| ||||| |||||||||||||||    
T  10713 aagaatcctacatcggataggtgatggtctaacaatatgtttgtaagtgggggcaatc 10770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 173 - 230
Target Start/End: Original strand, 14379 - 14436
Alignment:
Q  173 aagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatc 230  Q
    |||| ||| |||||| |||||||| ||||||||||| ||||| |||||||||||||||    
T  14379 aagaatcctacatcggataggtgacggtctgacaatatgtttgtaagtgggggcaatc 14436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 10944 - 11004
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    ||||||||  |||||||||||||||| | |||||||||||||| |||||| | ||||||||    
T  10944 taagagtcatacatcgaataggtgatagcctgacaatgtgtttgtaagtgagtgcaatcct 11004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 14610 - 14670
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    ||||||||  |||||||||||||||| | |||||||||||||| |||||| | ||||||||    
T  14610 taagagtcatacatcgaataggtgatagcctgacaatgtgtttgtaagtgagtgcaatcct 14670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 5625 - 5685
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||||||  ||||  |||||  |||||||||||||||||||||||| ||||||    
T  5625 taagagtcccacatcagatagaagatggcatgacaatgtgtttataagtgggggtaatcct 5685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 69647 - 69587
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    ||||||||||||| || ||||   |||| |||||||| |||||||||||||||||||||||    
T  69647 taagagtcccacaacggatagaacatggcctgacaatctgtttataagtgggggcaatcct 69587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 121523 - 121583
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    ||||||||| |||||| ||||||||||   ||||||||||||| ||||||||||| |||||    
T  121523 taagagtcctacatcggataggtgatgacatgacaatgtgtttgtaagtgggggccatcct 121583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 232
Target Start/End: Original strand, 51236 - 51266
Alignment:
Q  202 tgacaatgtgtttataagtgggggcaatcct 232  Q
    |||||||||||||||||||||||||||||||    
T  51236 tgacaatgtgtttataagtgggggcaatcct 51266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 232
Target Start/End: Complemental strand, 4543 - 4483
Alignment:
Q  172 taagagtcccacatcgaataggtgatggtctgacaatgtgtttataagtgggggcaatcct 232  Q
    ||||||| |||||||   |||| | ||| |||||||| |||||||||||||||||||||||    
T  4543 taagagtgccacatcagttaggagttggcctgacaatttgtttataagtgggggcaatcct 4483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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