View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3419_low_7 (Length: 250)
Name: NF3419_low_7
Description: NF3419
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3419_low_7 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 16 - 250
Target Start/End: Original strand, 34472882 - 34473116
Alignment:
| Q |
16 |
atcaaatgagtggctgagattctaccgaatctccaatcattgtaggggatctactcccggacagaactagaccactagctcactctcaaccaaaacaact |
115 |
Q |
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| T |
34472882 |
atcaaatgagtggctgagattctaccgaatctccaatcattgtaggggatctactcccggacagaactagaccactagctcactctcaaccaaaacaact |
34472981 |
T |
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| Q |
116 |
aggttactccttcaatgccaattgattgtgaaattctaaaaactaatcatcattctcatttaacaataaattaaagttactaactcgagatatatcaata |
215 |
Q |
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| T |
34472982 |
aggttactccttcaatgccaattgattgtgaaattctaaaaactaatcatcattctcatttaacaataaattaaagttactaactcgagatatatcaata |
34473081 |
T |
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| Q |
216 |
gttaaatttatgataaagtaaaacccctgcatttt |
250 |
Q |
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| T |
34473082 |
gttaaatttatgataaagtaaaacccctgcatttt |
34473116 |
T |
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