View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3422_high_5 (Length: 331)
Name: NF3422_high_5
Description: NF3422
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3422_high_5 |
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Alignment Details
Target: chr7 (Bit Score: 302; Significance: 1e-170; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 302; E-Value: 1e-170
Query Start/End: Original strand, 1 - 314
Target Start/End: Complemental strand, 36960159 - 36959846
Alignment:
| Q |
1 |
ttctcgaatgtattatttctttgttagtttgatcttcaaatttctcttatgttggtcaatttaaacaacaaaattattagaaaatggcatagtcaaggat |
100 |
Q |
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| T |
36960159 |
ttctcgaatgtattatttctttgttagtttgatcttcaaatttctcttatgttggtcaatttaaacaacgaaatcattagaaaatggcatagtcaaggat |
36960060 |
T |
|
| Q |
101 |
gttattataattttgatatattttagaactatagtgacacacacagcctcgcatatttttggaccaaaatgataattcactctaataataacttgtttgt |
200 |
Q |
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| T |
36960059 |
gttattataattttgatatattttagaactatagtgacacacacagcctcgcatatttttggaccaaaatgataattcactctaataataacttgtttgt |
36959960 |
T |
|
| Q |
201 |
attttctcgcttgaaagatagttatgggcattcactatgttcactcgtgcaggctaagcacatgaactgatttccttttgagaacataaattattgcgat |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36959959 |
attttctcgcttgaaagatagttatgggcattcactatcttcactcgtgcaggctaagcacatgaactgatttccttttgagaacataaattattgcgat |
36959860 |
T |
|
| Q |
301 |
tcttggcttacatg |
314 |
Q |
| |
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|||||||||||||| |
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| T |
36959859 |
tcttggcttacatg |
36959846 |
T |
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