View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3422_low_4 (Length: 338)

Name: NF3422_low_4
Description: NF3422
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3422_low_4
NF3422_low_4
[»] chr3 (29 HSPs)
chr3 (22-323)||(43929056-43929366)
chr3 (69-323)||(55291725-55291988)
chr3 (69-323)||(10554972-10555235)
chr3 (69-323)||(46722710-46722973)
chr3 (69-279)||(10833429-10833641)
chr3 (108-323)||(6805091-6805308)
chr3 (69-264)||(43549779-43549983)
chr3 (27-154)||(50243656-50243784)
chr3 (35-156)||(6820011-6820133)
chr3 (27-154)||(16643926-16644054)
chr3 (35-154)||(24152473-24152593)
chr3 (69-156)||(42369-42456)
chr3 (71-156)||(16324666-16324751)
chr3 (69-156)||(3803655-3803742)
chr3 (69-156)||(12305904-12305991)
chr3 (69-156)||(29544157-29544244)
chr3 (90-156)||(18890265-18890331)
chr3 (69-156)||(5224164-5224251)
chr3 (69-156)||(13437080-13437167)
chr3 (69-156)||(54521604-54521691)
chr3 (69-156)||(15465936-15466023)
chr3 (89-156)||(18893524-18893591)
chr3 (69-156)||(26054558-26054645)
chr3 (104-185)||(3160786-3160867)
chr3 (124-156)||(14641729-14641761)
chr3 (98-156)||(13522502-13522560)
chr3 (98-156)||(22652613-22652671)
chr3 (98-156)||(48631172-48631230)
chr3 (98-155)||(16979753-16979810)
[»] scaffold0364 (1 HSPs)
scaffold0364 (27-323)||(7838-8135)
[»] scaffold0016 (1 HSPs)
scaffold0016 (18-323)||(174180-174495)
[»] chr7 (36 HSPs)
chr7 (18-323)||(16462741-16463049)
chr7 (18-323)||(39431259-39431575)
chr7 (18-323)||(4325761-4326076)
chr7 (18-322)||(44190288-44190595)
chr7 (108-323)||(708685-708902)
chr7 (69-323)||(14415568-14415831)
chr7 (69-323)||(13647947-13648210)
chr7 (69-323)||(14105551-14105814)
chr7 (104-322)||(25942143-25942364)
chr7 (116-323)||(19194856-19195072)
chr7 (69-323)||(17505088-17505351)
chr7 (69-323)||(17547863-17548126)
chr7 (113-323)||(37539113-37539331)
chr7 (108-323)||(12754829-12755053)
chr7 (36-156)||(13864452-13864573)
chr7 (27-154)||(18455669-18455797)
chr7 (18-126)||(23556215-23556324)
chr7 (18-126)||(23557404-23557513)
chr7 (108-268)||(47975055-47975225)
chr7 (69-156)||(14188417-14188504)
chr7 (150-323)||(24270159-24270329)
chr7 (69-156)||(11661947-11662034)
chr7 (69-156)||(23664246-23664333)
chr7 (69-155)||(11304030-11304116)
chr7 (69-156)||(1856524-1856611)
chr7 (69-156)||(13256534-13256621)
chr7 (69-156)||(13917696-13917783)
chr7 (69-156)||(16107982-16108069)
chr7 (69-156)||(25926423-25926510)
chr7 (104-156)||(14274063-14274115)
chr7 (69-156)||(29797392-29797479)
chr7 (69-156)||(29801211-29801298)
chr7 (98-167)||(29052336-29052405)
chr7 (124-156)||(17070470-17070502)
chr7 (108-156)||(13315245-13315293)
chr7 (98-154)||(32160354-32160410)
[»] scaffold0070 (1 HSPs)
scaffold0070 (64-323)||(8762-9024)
[»] scaffold0334 (1 HSPs)
scaffold0334 (69-323)||(1790-2053)
[»] chr1 (15 HSPs)
chr1 (69-323)||(45574143-45574399)
chr1 (108-323)||(7052177-7052402)
chr1 (69-323)||(22130149-22130412)
chr1 (104-323)||(23194671-23194898)
chr1 (27-154)||(13880617-13880745)
chr1 (108-232)||(24723624-24723757)
chr1 (122-248)||(8306344-8306478)
chr1 (69-156)||(297197-297284)
chr1 (18-98)||(20058382-20058463)
chr1 (69-154)||(28313192-28313277)
chr1 (124-156)||(38056853-38056885)
chr1 (124-155)||(8276170-8276201)
chr1 (98-156)||(46197899-46197957)
chr1 (108-156)||(6834006-6834054)
chr1 (108-156)||(17901966-17902014)
[»] chr8 (19 HSPs)
chr8 (69-323)||(25483565-25483821)
chr8 (98-323)||(22483451-22483678)
chr8 (116-323)||(36732656-36732871)
chr8 (18-150)||(20463042-20463175)
chr8 (25-154)||(17460286-17460416)
chr8 (27-154)||(23661140-23661268)
chr8 (52-153)||(20455831-20455933)
chr8 (69-156)||(8413872-8413959)
chr8 (69-156)||(19882789-19882876)
chr8 (74-153)||(20460809-20460888)
chr8 (74-153)||(20455095-20455174)
chr8 (69-155)||(14397034-14397120)
chr8 (22-84)||(22920048-22920113)
chr8 (69-156)||(11775564-11775642)
chr8 (98-156)||(25657668-25657726)
chr8 (98-167)||(19880652-19880721)
chr8 (98-156)||(16198676-16198734)
chr8 (117-167)||(26454535-26454585)
chr8 (108-156)||(12037328-12037376)
[»] chr2 (19 HSPs)
chr2 (113-322)||(1383821-1384032)
chr2 (69-323)||(20590406-20590669)
chr2 (122-323)||(149684-149894)
chr2 (108-323)||(36734616-36734832)
chr2 (69-322)||(41301053-41301319)
chr2 (113-323)||(28345205-28345423)
chr2 (27-156)||(22173058-22173188)
chr2 (33-156)||(7187267-7187391)
chr2 (35-157)||(43707136-43707259)
chr2 (69-156)||(13100858-13100945)
chr2 (69-156)||(21072812-21072899)
chr2 (69-156)||(23338523-23338610)
chr2 (18-87)||(31521078-31521148)
chr2 (69-156)||(10684056-10684143)
chr2 (69-156)||(20262001-20262088)
chr2 (69-155)||(31345962-31346048)
chr2 (113-156)||(31521018-31521061)
chr2 (98-156)||(18358121-18358179)
chr2 (98-156)||(19647074-19647132)
[»] chr4 (22 HSPs)
chr4 (69-323)||(16277411-16277674)
chr4 (108-322)||(19434823-19435046)
chr4 (69-323)||(53387021-53387284)
chr4 (108-323)||(35660551-35660776)
chr4 (18-156)||(15344776-15344915)
chr4 (18-154)||(15447449-15447586)
chr4 (27-154)||(23802485-23802613)
chr4 (33-156)||(12611752-12611876)
chr4 (33-156)||(51463115-51463239)
chr4 (18-156)||(13043841-13043980)
chr4 (108-268)||(14549368-14549538)
chr4 (108-256)||(16296602-16296759)
chr4 (69-156)||(28386085-28386172)
chr4 (69-156)||(18230582-18230669)
chr4 (69-156)||(33849584-33849671)
chr4 (69-156)||(49547067-49547154)
chr4 (69-156)||(36038652-36038739)
chr4 (69-156)||(15534963-15535050)
chr4 (237-323)||(630164-630250)
chr4 (124-156)||(9638849-9638881)
chr4 (98-156)||(10694399-10694457)
chr4 (98-154)||(10908165-10908221)
[»] chr5 (22 HSPs)
chr5 (69-323)||(18419117-18419380)
chr5 (108-323)||(36508907-36509131)
chr5 (104-323)||(24668316-24668544)
chr5 (104-323)||(24738085-24738313)
chr5 (104-323)||(24750854-24751082)
chr5 (27-154)||(22412930-22413058)
chr5 (150-323)||(16604776-16604951)
chr5 (104-234)||(24594222-24594361)
chr5 (69-156)||(27868698-27868785)
chr5 (69-156)||(33472687-33472774)
chr5 (69-156)||(41875716-41875803)
chr5 (69-156)||(9776947-9777034)
chr5 (69-156)||(37804196-37804283)
chr5 (227-323)||(24617174-24617270)
chr5 (227-323)||(24713405-24713501)
chr5 (227-323)||(24746433-24746529)
chr5 (105-156)||(30138244-30138295)
chr5 (105-156)||(21503979-21504030)
chr5 (98-156)||(265878-265936)
chr5 (98-156)||(17011568-17011626)
chr5 (104-152)||(16063527-16063575)
chr5 (98-154)||(29448682-29448738)
[»] scaffold0555 (1 HSPs)
scaffold0555 (98-323)||(8951-9178)
[»] scaffold0151 (1 HSPs)
scaffold0151 (69-323)||(9760-10023)
[»] scaffold0026 (1 HSPs)
scaffold0026 (98-323)||(21786-22020)
[»] scaffold0040 (1 HSPs)
scaffold0040 (108-323)||(106325-106550)
[»] scaffold0290 (1 HSPs)
scaffold0290 (25-154)||(916-1046)
[»] scaffold0956 (1 HSPs)
scaffold0956 (23-155)||(2172-2305)
[»] scaffold0106 (1 HSPs)
scaffold0106 (18-156)||(21825-21964)
[»] chr6 (20 HSPs)
chr6 (18-156)||(611641-611780)
chr6 (27-156)||(20556113-20556243)
chr6 (27-143)||(14978622-14978739)
chr6 (150-323)||(19234790-19234964)
chr6 (27-154)||(25618979-25619106)
chr6 (113-323)||(35057209-35057427)
chr6 (69-156)||(13765188-13765275)
chr6 (69-156)||(23956704-23956791)
chr6 (69-154)||(23225981-23226066)
chr6 (69-156)||(31021845-31021932)
chr6 (113-323)||(13285413-13285631)
chr6 (69-156)||(28288630-28288717)
chr6 (69-156)||(12942971-12943058)
chr6 (69-156)||(23415746-23415833)
chr6 (69-156)||(27557504-27557591)
chr6 (104-156)||(29045104-29045156)
chr6 (124-155)||(19825667-19825698)
chr6 (108-154)||(5833817-5833863)
chr6 (98-156)||(15891723-15891781)
chr6 (98-156)||(15900808-15900866)
[»] scaffold0877 (1 HSPs)
scaffold0877 (25-154)||(2106-2236)
[»] scaffold0125 (1 HSPs)
scaffold0125 (25-154)||(1129-1259)
[»] scaffold0023 (1 HSPs)
scaffold0023 (18-156)||(163175-163314)
[»] scaffold0394 (1 HSPs)
scaffold0394 (27-156)||(12891-13021)
[»] scaffold0112 (1 HSPs)
scaffold0112 (25-154)||(23202-23332)
[»] scaffold0057 (1 HSPs)
scaffold0057 (35-156)||(72278-72400)
[»] scaffold1439 (1 HSPs)
scaffold1439 (27-156)||(917-1047)
[»] scaffold0083 (1 HSPs)
scaffold0083 (27-141)||(42153-42268)
[»] scaffold0058 (1 HSPs)
scaffold0058 (69-200)||(39936-40075)
[»] scaffold0086 (1 HSPs)
scaffold0086 (113-309)||(35655-35851)
[»] scaffold0037 (1 HSPs)
scaffold0037 (27-156)||(82839-82969)
[»] scaffold1276 (1 HSPs)
scaffold1276 (69-156)||(981-1068)
[»] scaffold0001 (2 HSPs)
scaffold0001 (69-156)||(169281-169368)
scaffold0001 (69-156)||(176634-176721)
[»] scaffold0149 (1 HSPs)
scaffold0149 (108-248)||(21279-21428)
[»] scaffold0453 (1 HSPs)
scaffold0453 (69-156)||(7134-7221)
[»] scaffold0422 (1 HSPs)
scaffold0422 (69-156)||(3805-3892)
[»] scaffold0200 (1 HSPs)
scaffold0200 (69-156)||(18435-18522)
[»] scaffold0293 (1 HSPs)
scaffold0293 (69-156)||(19423-19510)
[»] scaffold0051 (1 HSPs)
scaffold0051 (69-156)||(31985-32071)
[»] scaffold0439 (1 HSPs)
scaffold0439 (98-156)||(12081-12139)
[»] scaffold0117 (1 HSPs)
scaffold0117 (69-155)||(42514-42600)
[»] scaffold0234 (1 HSPs)
scaffold0234 (25-99)||(26062-26136)
[»] scaffold0061 (2 HSPs)
scaffold0061 (98-156)||(14740-14798)
scaffold0061 (98-156)||(23798-23856)
[»] scaffold0046 (1 HSPs)
scaffold0046 (98-156)||(21931-21989)
[»] scaffold0220 (1 HSPs)
scaffold0220 (124-156)||(13788-13820)
[»] scaffold0213 (1 HSPs)
scaffold0213 (113-153)||(18958-18998)
[»] scaffold0035 (1 HSPs)
scaffold0035 (104-156)||(43947-43999)
[»] scaffold0676 (1 HSPs)
scaffold0676 (122-156)||(2654-2688)
[»] scaffold0138 (1 HSPs)
scaffold0138 (98-156)||(20937-20995)
[»] scaffold0034 (1 HSPs)
scaffold0034 (98-156)||(29370-29428)
[»] scaffold0462 (2 HSPs)
scaffold0462 (113-153)||(1113-1153)
scaffold0462 (113-153)||(6619-6659)
[»] scaffold0436 (1 HSPs)
scaffold0436 (98-154)||(8802-8858)
[»] scaffold0328 (1 HSPs)
scaffold0328 (126-154)||(18824-18852)


Alignment Details
Target: chr3 (Bit Score: 225; Significance: 1e-124; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 22 - 323
Target Start/End: Complemental strand, 43929366 - 43929056
Alignment:
Q  22 ttgattttgggaattgggaattaggtttttcattgttgagtcgattagaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggttgtat 121  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  43929366 ttgattttgggaattgggaattaggttttccattgttgagtcgattagaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggttgtag 43929267  T
Q  122 aataatcataggttaagtttcctatcaaatttggg-------tagataaaatttagtttttt-gggtgaaaaatgtgcagaaatcgtaacagcaggg-aa 212  Q
    ||||||| |||||||||||||||||||||||||||       |||||  ||||| ||||||| |||||||||||||||||||||||||||||||||| ||    
T  43929266 aataatcgtaggttaagtttcctatcaaatttgggatttgggtagatggaatttggtttttttgggtgaaaaatgtgcagaaatcgtaacagcaggggaa 43929167  T
Q  213 aaactcgctaggagttcgctgttggcgaaacactctataacaattttgctattagctaacttttcgccattagcgaaattgctcagtgacatcatactct 312  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||| ||||||||||||| |||||||||||||||||||||||||||||| ||||||||    
T  43929166 aaactcgctaggagttcgctattggcgaaacactctgtaacaatttcgctattagctaacatttcgccattagcgaaattgctcagtgacagcatactct 43929067  T
Q  313 gttttatgttc 323  Q
    |||||||||||    
T  43929066 gttttatgttc 43929056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 69 - 323
Target Start/End: Original strand, 55291725 - 55291988
Alignment:
Q  69 gaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggttgtataataatcataggttaagtttcctatcaaatttggg-------tagat 161  Q
    |||||||||||||||||||  ||||||||||||| |||||||| |||||||| |||||||||||||||||||||||||||||||||||       | |||    
T  55291725 gaaaagtgtagaaaccatggcaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttggggtttgggttgat 55291824  T
Q  162 aaaatttagtttttt-gggtgaaaaatgtgcagaaatcgtaacagca-gggaaaaactcgctaggagttcgctgttggcgaaacactctataacaatttt 259  Q
     |||||| ||||||| ||||||||| ||||||||||||||||||||| |||||||||||||||||||||| || || ||||||| | ||||||| ||||     
T  55291825 gaaatttggtttttttgggtgaaaattgtgcagaaatcgtaacagcaagggaaaaactcgctaggagttcactattagcgaaactccctataactatttc 55291924  T
Q  260 gctattagctaacttttcgccattagcgaaattgctcagtgacatcatactctgttttatgttc 323  Q
    |||||||||| |||||||||||||||||||||||| |||||||| ||||| |||||||||||||    
T  55291925 gctattagctcacttttcgccattagcgaaattgcccagtgacaacataccctgttttatgttc 55291988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 69 - 323
Target Start/End: Complemental strand, 10555235 - 10554972
Alignment:
Q  69 gaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggttgtataataatcataggttaagtttcctatcaaatttggg-------tagat 161  Q
    |||||||||||||||||||  ||||||||||||| |||||||| |||| ||| |||||||||||||||||||||||||||||||||||       |||||    
T  10555235 gaaaagtgtagaaaccatggcaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttcggtagat 10555136  T
Q  162 aaaatttagttttt-tgggtgaaaaatgtgcagaaatcgtaacagca-gggaaaaactcgctaggagttcgctgttggcgaaacactctataacaatttt 259  Q
     |||||| |||||| |||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| || ||||||| | || |||| ||||     
T  10555135 gaaatttggtttttctgggtgaaaattgtgcagaaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactatttc 10555036  T
Q  260 gctattagctaacttttcgccattagcgaaattgctcagtgacatcatactctgttttatgttc 323  Q
    |||||||||| | |||||||||||||||||||||| |||||||| ||| |  ||||||||||||    
T  10555035 gctattagctcagttttcgccattagcgaaattgcccagtgacagcattccttgttttatgttc 10554972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 69 - 323
Target Start/End: Original strand, 46722710 - 46722973
Alignment:
Q  69 gaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggttgtataataatcataggttaagtttcctatcaaatttggg-------tagat 161  Q
    ||||||||| ||||| |||  ||||||||||||| |||||||| |||||||| |||||||||||||||||||||||||||||||||||       | | |    
T  46722710 gaaaagtgtggaaactatggcaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttggggtttcggttgct 46722809  T
Q  162 aaaatttagtttttt-gggtgaaaaatgtgcagaaatcgtaacagca-gggaaaaactcgctaggagttcgctgttggcgaaacactctataacaatttt 259  Q
     ||||||  |||||| ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| || ||||||| | || |||| ||||     
T  46722810 gaaatttgttttttttgggtgaaaattgtgcagaaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactatttc 46722909  T
Q  260 gctattagctaacttttcgccattagcgaaattgctcagtgacatcatactctgttttatgttc 323  Q
    |||||||||| ||||||||||||||||||| |||| |||||||| ||||| |||||||||||||    
T  46722910 gctattagctcacttttcgccattagcgaacttgcccagtgacagcataccctgttttatgttc 46722973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 69 - 279
Target Start/End: Original strand, 10833429 - 10833641
Alignment:
Q  69 gaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggttgtataataatcataggttaagtttcctatcaaatttgggtagataaaattt 168  Q
    ||||||||||||||||||   ||||||||||||| |||||||  || ||| | |||||||||||||||||||||||||||||||||||||||| ||||||    
T  10833429 gaaaagtgtagaaaccatcgaaattgtgttaagaattgatgtccagattgcagaataatcataggttaagtttcctatcaaatttgggtagatgaaattt 10833528  T
Q  169 ag-ttttttgggtgaaaaatgtgcagaaatcgtaacagc-agggaaaaactcgctaggagttcgctgttggcgaaacactctataacaattttgctatta 266  Q
     | |||||||||||||||||||||||||||||||||||| | ||||||||||||||||| |||||| || ||||||| | || |||| |||| |||||||    
T  10833529 ggtttttttgggtgaaaaatgtgcagaaatcgtaacagcaatggaaaaactcgctaggatttcgctattagcgaaactccctgtaactatttcgctatta 10833628  T
Q  267 gctaacttttcgc 279  Q
    ||| |||||||||    
T  10833629 gctcacttttcgc 10833641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 108 - 323
Target Start/End: Original strand, 6805091 - 6805308
Alignment:
Q  108 tgtttaggttgtataataatcataggttaagtttcctatcaaatttgggtagataaaatttag-ttttttgggtgaaaaatgtgcagaaatcgtaacagc 206  Q
    |||| |||||||| |||||||||| ||||||||| |||||||||||||||||||||||||| | ||||||| |||||||||||||||||||||||||||     
T  6805091 tgttcaggttgtagaataatcatatgttaagttttctatcaaatttgggtagataaaatttggattttttgagtgaaaaatgtgcagaaatcgtaacagt 6805190  T
Q  207 aggg-aaaaactcgctaggagttcgctgttggcgaaacactctataacaattttgctattagctaacttttcgccattagcgaaattgctcagtgacatc 305  Q
    |||| ||||||||| ||| | |||||| |||||||||| |||| ||||||||| ||||||||||||||||| || |||| |||||||||  ||||||| |    
T  6805191 aggggaaaaactcgttagaaattcgctattggcgaaaccctctgtaacaatttcgctattagctaactttttgctattaccgaaattgcatagtgacagc 6805290  T
Q  306 atactctgttttatgttc 323  Q
    ||||   |||||||||||    
T  6805291 atacctagttttatgttc 6805308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 69 - 264
Target Start/End: Original strand, 43549779 - 43549983
Alignment:
Q  69 gaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggttgtataataatcataggttaagtttcctatcaa-------atttgggtagat 161  Q
    ||||||||||||||||||   ||||||||||||| |||||||| |||||||| ||||||||||||||||||||||||||||       ||||||||||||    
T  43549779 gaaaagtgtagaaaccatcgaaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttgggatttgggtagat 43549878  T
Q  162 aaaatttag-ttttttgggtgaaaaatgtgcagaaatcgtaacagc-agggaaaaactcgctaggagttcgctgttggcgaaacactctataacaatttt 259  Q
     |||||| | |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||| || ||||||| | || |||| ||||     
T  43549879 gaaatttggtttttttgggtgaaaaatgtgcagaaatcgtaacagcaagggaaaaactcgctaggatttcgctattagcgaaactccctgtaactatttc 43549978  T
Q  260 gctat 264  Q
    |||||    
T  43549979 gctat 43549983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 27 - 154
Target Start/End: Complemental strand, 50243784 - 50243656
Alignment:
Q  27 tttgggaattgggaattaggtttttcattgttgagtc-gattagaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggttgtataata 125  Q
    |||| ||||||||||||||||||| |||||||||||  |||||||||||||||||||||||| |||||||||||||| |||||||| | |||||| ||||    
T  50243784 tttgagaattgggaattaggttttccattgttgagtttgattagaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcatgttgtagaata 50243685  T
Q  126 atcataggttaagtttcctatcaaatttg 154  Q
    |||||||||||||||||||| ||||||||    
T  50243684 atcataggttaagtttcctaacaaatttg 50243656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 35 - 156
Target Start/End: Complemental strand, 6820133 - 6820011
Alignment:
Q  35 ttgggaattaggtttttcattgttgagt-cgattagaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggttgtataataatcatagg 133  Q
    |||||||||||||||| ||||||||||| ||||||||||||||||||||| |||  ||||||||||||| |||||||| |||||||| ||||||||||||    
T  6820133 ttgggaattaggttttccattgttgagttcgattagaaaagtgtagaaactatgtcaattgtgttaagaattgatgttcaggttgtagaataatcatagg 6820034  T
Q  134 ttaagtttcctatcaaatttggg 156  Q
    |||||||||||| ||||||||||    
T  6820033 ttaagtttcctaacaaatttggg 6820011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 27 - 154
Target Start/End: Complemental strand, 16644054 - 16643926
Alignment:
Q  27 tttgggaattgggaattaggtttttcattgttgagtc-gattagaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggttgtataata 125  Q
    |||| ||||||||||||||||||| ||||||| |||  |||||||||||||||||||||||| |||||||||||||| |||||||| |||||||| ||||    
T  16644054 tttgagaattgggaattaggttttccattgttcagtttgattagaaaagtgtagaaaccatgataattgtgttaagaattgatgttcaggttgtagaata 16643955  T
Q  126 atcataggttaagtttcctatcaaatttg 154  Q
    ||||||||||||| |||||| ||||||||    
T  16643954 atcataggttaagcttcctaacaaatttg 16643926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 35 - 154
Target Start/End: Original strand, 24152473 - 24152593
Alignment:
Q  35 ttgggaattaggtttttcattgttgagtc-gattagaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggttgtataataatcatagg 133  Q
    |||||||||||||||| |||||||||||  ||||| |||||||||||||||||| |||||||||||||| |||||||| |||||||| ||||||||||||    
T  24152473 ttgggaattaggttttccattgttgagtttgattataaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcatagg 24152572  T
Q  134 ttaagtttcctatcaaatttg 154  Q
    ||||||||| || ||||||||    
T  24152573 ttaagtttcataacaaatttg 24152593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 69 - 156
Target Start/End: Complemental strand, 42456 - 42369
Alignment:
Q  69 gaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggttgtataataatcataggttaagtttcctatcaaatttggg 156  Q
    ||||||||||||||||||   ||||||||||||| |||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  42456 gaaaagtgtagaaaccatcgaaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttggg 42369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 71 - 156
Target Start/End: Original strand, 16324666 - 16324751
Alignment:
Q  71 aaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggttgtataataatcataggttaagtttcctatcaaatttggg 156  Q
    ||||||||||||||||   ||||||||||||| |||||||| |||||||| |||||| |||| |||||||||||||||||||||||    
T  16324666 aaagtgtagaaaccattgaaattgtgttaagaattgatgttcaggttgtagaataattatagcttaagtttcctatcaaatttggg 16324751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 69 - 156
Target Start/End: Complemental strand, 3803742 - 3803655
Alignment:
Q  69 gaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggttgtataataatcataggttaagtttcctatcaaatttggg 156  Q
    |||||||||||||||||||  ||||||||||||| | |||||| || ||||| ||||| |||||||| ||||||||||||||||||||    
T  3803742 gaaaagtgtagaaaccatgacaattgtgttaagaatcgatgttcagattgtagaataaacataggttgagtttcctatcaaatttggg 3803655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 69 - 156
Target Start/End: Complemental strand, 12305991 - 12305904
Alignment:
Q  69 gaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggttgtataataatcataggttaagtttcctatcaaatttggg 156  Q
    |||||||||||||||||||  ||||||||||||| | |||||| || ||||| ||||| |||||||| ||||||||||||||||||||    
T  12305991 gaaaagtgtagaaaccatgacaattgtgttaagaatcgatgttcagattgtagaataaacataggttgagtttcctatcaaatttggg 12305904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 69 - 156
Target Start/End: Original strand, 29544157 - 29544244
Alignment:
Q  69 gaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggttgtataataatcataggttaagtttcctatcaaatttggg 156  Q
    |||||||||||||||||||  ||||||||||||| | |||||| || ||||| ||||| |||||||| ||||||||||||||||||||    
T  29544157 gaaaagtgtagaaaccatgacaattgtgttaagaatcgatgttcagattgtagaataaacataggttgagtttcctatcaaatttggg 29544244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 90 - 156
Target Start/End: Complemental strand, 18890331 - 18890265
Alignment:
Q  90 aattgtgttaagacttgatgtttaggttgtataataatcataggttaagtttcctatcaaatttggg 156  Q
    ||||||||||||| |||||||| |||||||  |||||||||||||||||||||||||||||||||||    
T  18890331 aattgtgttaagaattgatgttcaggttgtggaataatcataggttaagtttcctatcaaatttggg 18890265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 69 - 156
Target Start/End: Complemental strand, 5224251 - 5224164
Alignment:
Q  69 gaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggttgtataataatcataggttaagtttcctatcaaatttggg 156  Q
    ||||||||||||||||||   ||||||||||||| |||| ||| ||| |||| ||||| |||||||| ||||||||||||||||||||    
T  5224251 gaaaagtgtagaaaccattgaaattgtgttaagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttggg 5224164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 69 - 156
Target Start/End: Complemental strand, 13437167 - 13437080
Alignment:
Q  69 gaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggttgtataataatcataggttaagtttcctatcaaatttggg 156  Q
    |||||||||||||||||    ||||||||||||| | |||||| |||||||| ||||| |||||||| ||||||||||||||||||||    
T  13437167 gaaaagtgtagaaaccaacgaaattgtgttaagaatcgatgttcaggttgtagaataaacataggttgagtttcctatcaaatttggg 13437080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 69 - 156
Target Start/End: Complemental strand, 54521691 - 54521604
Alignment:
Q  69 gaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggttgtataataatcataggttaagtttcctatcaaatttggg 156  Q
    |||||||||||||||||||  ||||||||||||| | |||||| || ||||| |||||  ||||||| ||||||||||||||||||||    
T  54521691 gaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagattgtagaataaatataggttgagtttcctatcaaatttggg 54521604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 69 - 156
Target Start/End: Complemental strand, 15466023 - 15465936
Alignment:
Q  69 gaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggttgtataataatcataggttaagtttcctatcaaatttggg 156  Q
    ||||||||||||||||||   ||||||||||||| |||| ||| ||| |||| ||||| |||||||| ||||||||||||||| ||||    
T  15466023 gaaaagtgtagaaaccatcgaaattgtgttaagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatatggg 15465936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 89 - 156
Target Start/End: Complemental strand, 18893591 - 18893524
Alignment:
Q  89 taattgtgttaagacttgatgtttaggttgtataataatcataggttaagtttcctatcaaatttggg 156  Q
    |||||||||||||| |||||||| | |||||  |||||||||||||||||||| ||||||||||||||    
T  18893591 taattgtgttaagaattgatgttcacgttgtggaataatcataggttaagttttctatcaaatttggg 18893524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 69 - 156
Target Start/End: Original strand, 26054558 - 26054645
Alignment:
Q  69 gaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggttgtataataatcataggttaagtttcctatcaaatttggg 156  Q
    ||||| ||||||||||||   ||||||||||||| |||| ||| ||| |||| ||||| |||||||| ||||||||||||||||||||    
T  26054558 gaaaattgtagaaaccatcgaaattgtgttaagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttggg 26054645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 104 - 185
Target Start/End: Original strand, 3160786 - 3160867
Alignment:
Q  104 ttgatgtttaggttgtataataatcataggttaagtttcctatcaaatttgggtagataaaatttagttttttgggtgaaaa 185  Q
    ||||||||||||||||| |||||  ||||   | |||||||| |||||||||| || ||||||| || ||||||||||||||    
T  3160786 ttgatgtttaggttgtagaataacaatagacaatgtttcctaccaaatttgggaagttaaaattgagatttttgggtgaaaa 3160867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 124 - 156
Target Start/End: Original strand, 14641729 - 14641761
Alignment:
Q  124 taatcataggttaagtttcctatcaaatttggg 156  Q
    |||||||||||||||||||||||||||||||||    
T  14641729 taatcataggttaagtttcctatcaaatttggg 14641761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 156
Target Start/End: Original strand, 13522502 - 13522560
Alignment:
Q  98 taagacttgatgtttaggttgtataataatcataggttaagtttcctatcaaatttggg 156  Q
    ||||| |||||||| |||||||| |||||  |||||| | |||||||||||||||||||    
T  13522502 taagaattgatgttcaggttgtagaataacaataggtgatgtttcctatcaaatttggg 13522560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 156
Target Start/End: Complemental strand, 22652671 - 22652613
Alignment:
Q  98 taagacttgatgtttaggttgtataataatcataggttaagtttcctatcaaatttggg 156  Q
    ||||| |||| ||| ||| |||| ||||| |||||||| ||||||||||||||||||||    
T  22652671 taagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttggg 22652613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 156
Target Start/End: Complemental strand, 48631230 - 48631172
Alignment:
Q  98 taagacttgatgtttaggttgtataataatcataggttaagtttcctatcaaatttggg 156  Q
    ||||| |||||||| |||||||| |||||  |||||| | |||||||||||||||||||    
T  48631230 taagaattgatgttcaggttgtagaataacaataggtaatgtttcctatcaaatttggg 48631172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 98 - 155
Target Start/End: Complemental strand, 16979810 - 16979753
Alignment:
Q  98 taagacttgatgtttaggttgtataataatcataggttaagtttcctatcaaatttgg 155  Q
    ||||| |||| ||| ||| |||| ||||| |||||||| |||||||||||||||||||    
T  16979810 taagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgg 16979753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0364 (Bit Score: 196; Significance: 1e-106; HSPs: 1)
Name: scaffold0364
Description:

Target: scaffold0364; HSP #1
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 27 - 323
Target Start/End: Complemental strand, 8135 - 7838
Alignment:
Q  27 tttgggaattgggaattaggtttttcattgttgagt-cgattagaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggttgtataata 125  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||| ||||  |||||| |||||| |||||||| |||||||| ||||    
T  8135 tttgggaattgggaattaggttttccattgttgagttcgattagaaaagtgtagaaatcatggcaattgttttaagaattgatgttcaggttgtagaata 8036  T
Q  126 atcataggttaagtttcctatcaaatttgggtagataaaatttagtttttt-gggtgaaaaatgtgcagaaatcgtaacagc-agggaaaaactcgctag 223  Q
    |||||||||||||||||||||||||||||||||||| |||||| ||||||| ||||||||| |||||||||||||||||||| |||||||||||||||||    
T  8035 atcataggttaagtttcctatcaaatttgggtagatgaaatttggtttttttgggtgaaaa-tgtgcagaaatcgtaacagcaagggaaaaactcgctag 7937  T
Q  224 gagttcgctgttggcgaaacactctataacaattttgctattagctaacttttcgccattagcgaaattgctcagtgacatcatactctgttttatgttc 323  Q
    ||| ||||| ||||||||||||||| |||||||||||||||| |||||||||||||||||||| |||||||||||||||| ||||| |||||||||||||    
T  7936 gagatcgctattggcgaaacactct-taacaattttgctattcgctaacttttcgccattagcaaaattgctcagtgacagcataccctgttttatgttc 7838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 170; Significance: 3e-91; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 18 - 323
Target Start/End: Original strand, 174180 - 174495
Alignment:
Q  18 gttcttgattttgggaattgggaattaggtttttcattgttgagt-cgattagaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggt 116  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| | |||||||||||||||||||||||  ||||||||||||| |||||| | ||||    
T  174180 gttcttgattttgggaattgggaattaggttttccattgttgagttcaattagaaaagtgtagaaaccatgacaattgtgttaagaattgatggtcaggt 174279  T
Q  117 tgtataataatcataggttaagtttcctatcaaatttg-------ggtagataaaatttagttttttg-ggtgaaaaatgtgcagaaatcgtaacagcag 208  Q
    |||| |||||||||| ||||||||||||||||||||||       ||||||| |||||| |||||||  ||||||||||||| ||||||||||||| ||     
T  174280 tgtagaataatcatatgttaagtttcctatcaaatttgagatttgggtagatgaaatttggtttttttaggtgaaaaatgtgtagaaatcgtaacaacaa 174379  T
Q  209 -ggaaaaactcgctaggagttcgctgttggcgaaacactctataacaattttgctattagctaacttttcgccattagcgaaattgctcagtgacatcat 307  Q
     |||||||||||||||||||||||| |||||||||| |  | ||||||||| ||||||||||||||||||||| |||||||||||||||||||||| |||    
T  174380 cggaaaaactcgctaggagttcgctattggcgaaaccccttgtaacaatttcgctattagctaacttttcgcctttagcgaaattgctcagtgacagcat 174479  T
Q  308 actctgttttatgttc 323  Q
    || |||||||||||||    
T  174480 accctgttttatgttc 174495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 169; Significance: 1e-90; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 18 - 323
Target Start/End: Complemental strand, 16463049 - 16462741
Alignment:
Q  18 gttcttgattttgggaattgggaattaggtttttcattgttgagt-cgattagaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggt 116  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| |||||||||| |||||||||| |||  ||||||||||||| |||||||| ||||    
T  16463049 gttcttgattttgggaattgggaattaggttttccattgttgagttcgattagaaatgtgtagaaacgatggcaattgtgttaagaattgatgttcaggt 16462950  T
Q  117 tgtataataatcataggttaagtttcctatcaaatttgggtagataaaatttag-ttttttgggtgaaaaatgtgcagaaatcgtaacagcag-ggaaaa 214  Q
    |||| ||||||||||| |||||||||||||||||||||||||||| |||||| | |||||||||||||||||||||||||||||||| || || ||||||    
T  16462949 tgtagaataatcatagattaagtttcctatcaaatttgggtagatgaaatttggtttttttgggtgaaaaatgtgcagaaatcgtaaaagtagtggaaaa 16462850  T
Q  215 actcgctaggagttcgctgttggcgaaacactctataacaattttgctattagctaacttttcgccattagcgaaattgctcagtgacatcatactctgt 314  Q
    ||| | ||| |||||||| |||||||| | || | ||||||||| |||||||||||||||||||| ||||||||| |||| |||||||| ||| | || |    
T  16462849 acttgatagaagttcgctattggcgaatccctttgtaacaatttcgctattagctaacttttcgctattagcgaagttgcacagtgacagcatgccctat 16462750  T
Q  315 tttatgttc 323  Q
    |||||||||    
T  16462749 tttatgttc 16462741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 18 - 323
Target Start/End: Original strand, 39431259 - 39431575
Alignment:
Q  18 gttcttgattttgggaattgggaattaggtttttcattgttgagt-cgattagaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggt 116  Q
    ||||||||||||||||||||||||||||||||| |||| |||| | |||||||||||||||||||||||||  ||||||||||||| |||||||| ||||    
T  39431259 gttcttgattttgggaattgggaattaggttttccattcttgacttcgattagaaaagtgtagaaaccatgtcaattgtgttaagaattgatgttcaggt 39431358  T
Q  117 tgtataataatcataggttaagtttcctatcaaat-------ttgggtagataaaatttag-ttttttgggtgaaaaatgtgcagaaatcgtaacagca- 207  Q
    |||| |||||||||| |||| ||||||||||||||       ||||||| || |||||| | |||||||| ||||||||||||||||||||||||| ||     
T  39431359 tgtagaataatcatatgttatgtttcctatcaaatatgggatttgggtaaatgaaatttggattttttggatgaaaaatgtgcagaaatcgtaacaacaa 39431458  T
Q  208 gggaaaaactcgctaggagttcgctgttggcgaaacactctataacaattttgctattagctaacttttcgccattagcgaaattgctcagtgacatcat 307  Q
    |||||||||||||||| |||||||| |||||||||| |||| ||||||||| ||||||||||||||||| ||| ||||||||||||| |||||||| |||    
T  39431459 gggaaaaactcgctagaagttcgctattggcgaaaccctctctaacaatttcgctattagctaactttttgccgttagcgaaattgcacagtgacaacat 39431558  T
Q  308 a-ctctgttttatgttc 323  Q
    | | |||||||||||||    
T  39431559 acccctgttttatgttc 39431575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 18 - 323
Target Start/End: Complemental strand, 4326076 - 4325761
Alignment:
Q  18 gttcttgattttgggaattgggaattaggtttttcattgttgagtc-gattagaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggt 116  Q
    |||||||||||||||||| || |||||||||||  |||||| | |  |||||||  |||||||||||||||  ||||||||||||| |||||||| ||||    
T  4326076 gttcttgattttgggaatgggaaattaggttttctattgttaattttgattagatgagtgtagaaaccatgacaattgtgttaagaattgatgttcaggt 4325977  T
Q  117 tgtataataatcataggttaagtttcctatcaaatttggg-------tagataaaatttag-ttttttgggtgaaaaatgtgcagaaatcgtaacagca- 207  Q
    |||| |||||||||||||||||||||||||||||||||||       | ||| |||||| | |||||| ||||||||||||||||||||||||||||||     
T  4325976 tgtagaataatcataggttaagtttcctatcaaatttgggatttgggtggatgaaatttgggttttttaggtgaaaaatgtgcagaaatcgtaacagcaa 4325877  T
Q  208 gggaaaaactcgctaggagttcgctgttggcgaaacactctataacaattttgctattagctaacttttcgccattagcgaaattgctcagtgacatcat 307  Q
    |||||||||||||||||| |||||| ||||||||||||||| |||||||||  |||||||||||| |||||||||||||||||||||||||||||| |||    
T  4325876 gggaaaaactcgctaggaattcgctattggcgaaacactctgtaacaatttcactattagctaacctttcgccattagcgaaattgctcagtgacagcat 4325777  T
Q  308 actctgttttatgttc 323  Q
    |  |||||||||||||    
T  4325776 atcctgttttatgttc 4325761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 18 - 322
Target Start/End: Original strand, 44190288 - 44190595
Alignment:
Q  18 gttcttgattttgggaattgggaattaggtttttcattgttgagt-cgattagaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggt 116  Q
    ||||||||||||||||||||||||||| ||||| ||||||||||| |||||||||||||| ||||| ||||  ||||| ||||||| |||||||| ||||    
T  44190288 gttcttgattttgggaattgggaattaagttttccattgttgagttcgattagaaaagtgaagaaaacatgacaattgagttaagaattgatgttcaggt 44190387  T
Q  117 tgtataataatcataggttaagtttcctatcaaat-------ttgggtagataaaatttagttttttgggtgaaaaatgtgcagaaatcgtaacagca-g 208  Q
    |||| ||||||||||||||||||||||||||||||       |||||||||| ||||| |||||||| ||      ||||||||||||| |||||||| |    
T  44190388 tgtagaataatcataggttaagtttcctatcaaatgtgggatttgggtagatgaaattcagtttttttgg------atgtgcagaaatcataacagcaag 44190481  T
Q  209 ggaaaaactcgctaggagttcgctgttggcgaaacactctataacaattttgctattagctaacttttcgccattagcgaaattgctcagtgacatcata 308  Q
    |||||||||||||||||||||||| ||||||||||   || ||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||    
T  44190482 ggaaaaactcgctaggagttcgctattggcgaaacctcctgtaacaattttgctattagctaacttttcgccattagcgaaattgctcagtggcagcata 44190581  T
Q  309 ctctgttttatgtt 322  Q
    | || |||||||||    
T  44190582 ccctattttatgtt 44190595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 108 - 323
Target Start/End: Original strand, 708685 - 708902
Alignment:
Q  108 tgtttaggttgtataataatcataggttaagtttcctatcaaatttgggtagataaaatttag-ttttttgggtgaaaaatgtgcagaaatcgtaacagc 206  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||| | |||||| |||||||||||||||||||||||||||||    
T  708685 tgtttaggttgtagaataatcataggttaagtttcctatcaaatttgggtagatgaaatttgggtttttttggtgaaaaatgtgcagaaatcgtaacagc 708784  T
Q  207 aggg-aaaaactcgctaggagttcgctgttggcgaaacactctataacaattttgctattagctaacttttcgccattagcgaaattgctcagtgacatc 305  Q
     ||| ||||||||||||| ||||  || |||| ||||| |||| ||||||||| |||||||||||||||||||| |||||||||||||| |||||||| |    
T  708785 gggggaaaaactcgctagaagttttctattggtgaaaccctctgtaacaatttcgctattagctaacttttcgctattagcgaaattgcacagtgacagc 708884  T
Q  306 atactctgttttatgttc 323  Q
    |||| |||||||||||||    
T  708885 ataccctgttttatgttc 708902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 69 - 323
Target Start/End: Original strand, 14415568 - 14415831
Alignment:
Q  69 gaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggttgtataataatcataggttaagtttcctatcaaatttggg-------tagat 161  Q
    ||||||||| |||||||||  ||||||||||||| |||||||| |||||||| |||||||||||||||||||||||||||||||||||       | |||    
T  14415568 gaaaagtgtggaaaccatggcaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttggggtttgggttgat 14415667  T
Q  162 aaaatttagtttttt-gggtgaaaaatgtgcagaaatcgtaacagca-gggaaaaactcgctaggagttcgctgttggcgaaacactctataacaatttt 259  Q
     |||||| ||||||| ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| || ||||||| | || |||| ||||     
T  14415668 gaaatttggtttttttgggtgaaaattgtgcagaaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactatttc 14415767  T
Q  260 gctattagctaacttttcgccattagcgaaattgctcagtgacatcatactctgttttatgttc 323  Q
    |||||||||| ||||||||||||||||||| ||||  ||||||| ||||| |||||||||||||    
T  14415768 gctattagctcacttttcgccattagcgaacttgcctagtgacagcataccctgttttatgttc 14415831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 69 - 323
Target Start/End: Complemental strand, 13648210 - 13647947
Alignment:
Q  69 gaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggttgtataataatcataggttaagtttcctatcaaatttggg-------tagat 161  Q
    ||||||||||||||||||   ||||||||||||| ||||||||||||||||| |||||||||||||||| ||||||||||||||||||       |||||    
T  13648210 gaaaagtgtagaaaccatcaaaattgtgttaagaattgatgtttaggttgtagaataatcataggttaaatttcctatcaaatttgggatttaggtagat 13648111  T
Q  162 aaaatttagtttttt-gggtgaaaaatgtgcagaaatcgtaacagca-gggaaaaactcgctaggagttcgctgttggcgaaacactctataacaatttt 259  Q
     |||||| ||||||| ||||||||||||||||||||||||||||||| |||||||||| ||||||| |||||| || ||||||| | || |||| ||||     
T  13648110 gaaatttggtttttttgggtgaaaaatgtgcagaaatcgtaacagcaagggaaaaacttgctaggatttcgctattagcgaaactccctgtaactatttc 13648011  T
Q  260 gctattagctaacttttcgccattagcgaaattgctcagtgacatcatactctgttttatgttc 323  Q
    |||||||||| ||||||||| | ||||||||||||  ||||||| ||||| |||||||||||||    
T  13648010 gctattagctcacttttcgctactagcgaaattgcctagtgacagcataccctgttttatgttc 13647947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 69 - 323
Target Start/End: Original strand, 14105551 - 14105814
Alignment:
Q  69 gaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggttgtataataatcataggttaagtttcctatcaaatttggg-------tagat 161  Q
    ||||||||| |||||||||  ||||||||||||| |||||||| |||||||| |||||||||||||||||||||||||||||||||||       | |||    
T  14105551 gaaaagtgtggaaaccatggcaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttggggtttgggttgat 14105650  T
Q  162 aaaatttagtttttt-gggtgaaaaatgtgcagaaatcgtaacagca-gggaaaaactcgctaggagttcgctgttggcgaaacactctataacaatttt 259  Q
     |||||| ||||||| ||||||||| ||||||||||||||||||||| |||||||||||| |||||||||||| || ||||||| | || |||| ||||     
T  14105651 gaaatttggtttttttgggtgaaaattgtgcagaaatcgtaacagcaagggaaaaactcgttaggagttcgctattagcgaaactccctgtaactatttc 14105750  T
Q  260 gctattagctaacttttcgccattagcgaaattgctcagtgacatcatactctgttttatgttc 323  Q
    |||||||||| |||||||||||||||||||||||| |||||||| ||| | || ||||||||||    
T  14105751 gctattagctcacttttcgccattagcgaaattgcccagtgacagcattccctattttatgttc 14105814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 104 - 322
Target Start/End: Complemental strand, 25942364 - 25942143
Alignment:
Q  104 ttgatgtttaggttgtataataatcataggttaagtttcctatcaaatttgggtagataaaatttag--ttttttgggtgaaaaatgtgcagaaatcgta 201  Q
    |||||||| |||||||| ||||||| |||||||||||||||||||||||||||||||| |||||| |  |||||||||||||||||||| ||||||||||    
T  25942364 ttgatgttcaggttgtagaataatcttaggttaagtttcctatcaaatttgggtagatgaaatttgggtttttttgggtgaaaaatgtgtagaaatcgta 25942265  T
Q  202 acagcagg-gaaaaactcgctaggagttcgctgttggcgaaacactctataacaattttgctattagctaacttttcgccattagcgaaattgctcagtg 300  Q
    |||||||| |||||||||||||| |||||||| |||| ||||  |||| ||||||||| | |||||||||  |||||| ||||||||||||||| |||||    
T  25942264 acagcaggagaaaaactcgctagaagttcgctattggtgaaatcctctgtaacaatttcgatattagctagattttcgacattagcgaaattgcacagtg 25942165  T
Q  301 acatcatactctgttttatgtt 322  Q
    ||| |||||||||||| |||||    
T  25942164 acagcatactctgtttcatgtt 25942143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 116 - 323
Target Start/End: Complemental strand, 19195072 - 19194856
Alignment:
Q  116 ttgtataataatcataggttaagtttcctatcaaatttggg-------tagataaaatttag-ttttttgggtgaaaaatgtgcagaaatcgtaacagca 207  Q
    ||||| |||||||||||||||||||||||||||||||||||       ||||| |||||| | |||||||||||||||||||||||||||||||||||||    
T  19195072 ttgtagaataatcataggttaagtttcctatcaaatttgggatttgggtagatgaaatttgggttttttgggtgaaaaatgtgcagaaatcgtaacagca 19194973  T
Q  208 ggg-aaaaactcgctaggagttcgctgttggcgaaacactctataacaattttgctattagctaacttttcgccattagcgaaattgctcagtgacatca 306  Q
    ||| ||||||||||||| |||||||| |||||||||  |||| ||||||||| |||| |||||||||||||||||||||||||||||| |||||| | ||    
T  19194972 ggggaaaaactcgctagaagttcgctattggcgaaatcctctgtaacaatttcgctactagctaacttttcgccattagcgaaattgcacagtgatagca 19194873  T
Q  307 tactctgttttatgttc 323  Q
    ||| |||||||||||||    
T  19194872 taccctgttttatgttc 19194856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 69 - 323
Target Start/End: Original strand, 17505088 - 17505351
Alignment:
Q  69 gaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggttgtataataatcataggttaagtttcctatcaaatttgg-------gtagat 161  Q
    |||||||||||||||||||  ||||||||||||| |||||||| |||| ||| ||||||||||||||||||||||||||||||||||       ||||||    
T  17505088 gaaaagtgtagaaaccatggcaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggagtttgggtagat 17505187  T
Q  162 aaaatttagttttt-tgggtgaaaaatgtgcagaaatcgtaacagca-gggaaaaactcgctaggagttcgctgttggcgaaacactctataacaatttt 259  Q
     ||| || |||||| | |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| || || |||| | || |||| ||||     
T  17505188 gaaaattggtttttctaggtgaaaattgtgcagaaatcgtaacagcatgggaaaaactcgctaggagttcgctattagcaaaactccctgtaactatttc 17505287  T
Q  260 gctattagctaacttttcgccattagcgaaattgctcagtgacatcatactctgttttatgttc 323  Q
    ||| |||||| | |||||||||||||||||||||| |||||||| ||| | |||||||||||||    
T  17505288 gctcttagctcagttttcgccattagcgaaattgcccagtgacagcattccctgttttatgttc 17505351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 69 - 323
Target Start/End: Complemental strand, 17548126 - 17547863
Alignment:
Q  69 gaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggttgtataataatcataggttaagtttcctatcaaatttgg-------gtagat 161  Q
    |||||||||||||||||||  ||||||||||||| |||||||| |||| ||| ||||||||||||||||||||||||||||||||||       ||||||    
T  17548126 gaaaagtgtagaaaccatggcaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggagtttgggtagat 17548027  T
Q  162 aaaatttagttttt-tgggtgaaaaatgtgcagaaatcgtaacagca-gggaaaaactcgctaggagttcgctgttggcgaaacactctataacaatttt 259  Q
     ||| || |||||| | |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| || || |||| | || |||| ||||     
T  17548026 gaaaattggtttttctaggtgaaaattgtgcagaaatcgtaacagcatgggaaaaactcgctaggagttcgctattagcaaaactccctgtaactatttc 17547927  T
Q  260 gctattagctaacttttcgccattagcgaaattgctcagtgacatcatactctgttttatgttc 323  Q
    ||| |||||| | |||||||||||||||||||||| |||||||| ||| | |||||||||||||    
T  17547926 gctcttagctcagttttcgccattagcgaaattgcccagtgacagcattccctgttttatgttc 17547863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 113 - 323
Target Start/End: Complemental strand, 37539331 - 37539113
Alignment:
Q  113 aggttgtataataatcataggttaagtttcctatcaaatttgg-------gtagataaaatttagttttttgggtgaaaaa-tgtgcagaaatcgtaaca 204  Q
    |||||||| ||||||| ||||||||||||||||||||||||||       |||||| |||||| | ||||||||||||||| |||| |||||||||||||    
T  37539331 aggttgtagaataatcttaggttaagtttcctatcaaatttggaatttgggtagatgaaatttggatttttgggtgaaaaagtgtgtagaaatcgtaaca 37539232  T
Q  205 gcagggaaaaactcgctaggagttcgctgttggcgaaacactctataacaattttgctattagctaacttttcgccattagcgaaattgctcagtgacat 304  Q
    ||| || |||||||||||| |||||||| |||||||||  |||||||||||||| |||| ||||||  |||||||||||||||||||||| ||||||||     
T  37539231 gcatgggaaaactcgctagaagttcgctattggcgaaatcctctataacaatttcgctaatagctagattttcgccattagcgaaattgcacagtgacag 37539132  T
Q  305 catactctgttttatgttc 323  Q
    |||||||||||| ||||||    
T  37539131 catactctgtttcatgttc 37539113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 108 - 323
Target Start/End: Original strand, 12754829 - 12755053
Alignment:
Q  108 tgtttaggttgtataataatcataggttaagtttcctatcaaatttggg-------tagataaaatttag-ttttttgggtgaaaaatgtgcagaaatcg 199  Q
    |||| |||||||| |||||||||||||||||||||||||||||||||||       ||||| |||||| | ||||||| || ||||||||||||||||||    
T  12754829 tgttcaggttgtagaataatcataggttaagtttcctatcaaatttgggatttgggtagatgaaatttgggttttttgagtaaaaaatgtgcagaaatcg 12754928  T
Q  200 taacagcaggg-aaaaactcgctaggagttcgctgttggcgaaacactctataacaattttgctattagctaacttttcgccattagcgaaattgctcag 298  Q
    |||||| |||| ||||||||||||| |||| ||| || || |||| |||| ||||||||  ||||||||||||| |||||| |||||||||||||| |||    
T  12754929 taacagtaggggaaaaactcgctagaagtttgctattagctaaaccctctgtaacaattgcgctattagctaacgtttcgctattagcgaaattgcacag 12755028  T
Q  299 tgacatcatactctgttttatgttc 323  Q
    ||||| ||||| || ||| ||||||    
T  12755029 tgacagcataccctatttcatgttc 12755053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 36 - 156
Target Start/End: Original strand, 13864452 - 13864573
Alignment:
Q  36 tgggaattaggtttttcattgttgagt-cgattagaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggttgtataataatcataggt 134  Q
    ||||||||||||||| ||||||||||| |||||||||||||||||||| ||||  ||||||||||||| |||||||| || |||||||||||||||||||    
T  13864452 tgggaattaggttttccattgttgagttcgattagaaaagtgtagaaatcatgacaattgtgttaagaattgatgttcagattgtataataatcataggt 13864551  T
Q  135 taagtttcctatcaaatttggg 156  Q
    ||||||||||| ||||||||||    
T  13864552 taagtttcctaacaaatttggg 13864573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 27 - 154
Target Start/End: Original strand, 18455669 - 18455797
Alignment:
Q  27 tttgggaattgggaattaggtttttcattgttgagtc-gattagaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggttgtataata 125  Q
    |||| ||||||||||||||||||| |||| ||||||  |||||||||||||||||||||||| |||||||||||||| |||||||| |||||||| ||||    
T  18455669 tttgagaattgggaattaggttttccattattgagtttgattagaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaata 18455768  T
Q  126 atcataggttaagtttcctatcaaatttg 154  Q
    || |||| |||||||||||| ||||||||    
T  18455769 attatagcttaagtttcctaacaaatttg 18455797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 18 - 126
Target Start/End: Complemental strand, 23556324 - 23556215
Alignment:
Q  18 gttcttgattttgggaattgggaattaggtttttcattgttgag-tcgattagaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggt 116  Q
    ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||  ||| |||||| || |||||||| ||||    
T  23556324 gttcttgattttgggaattgggaattaggttttccattgttgagttcgattagaaaagtgtagaaaccatgacaatcgtgttatgaattgatgttaaggt 23556225  T
Q  117 tgtataataa 126  Q
    |||| |||||    
T  23556224 tgtagaataa 23556215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 18 - 126
Target Start/End: Complemental strand, 23557513 - 23557404
Alignment:
Q  18 gttcttgattttgggaattgggaattaggtttttcattgttgagt-cgattagaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggt 116  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||| |||||||||||||||||||||||||  |||||||||| || |||||||| ||||    
T  23557513 gttcttgattttgggaattggaaattaggttttccattgttgagttcgattagaaaagtgtagaaaccatgacaattgtgttatgaattgatgttcaggt 23557414  T
Q  117 tgtataataa 126  Q
    |||| |||||    
T  23557413 tgtagaataa 23557404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 108 - 268
Target Start/End: Original strand, 47975055 - 47975225
Alignment:
Q  108 tgtttaggttgtataataatcataggttaagtttcctatcaaatttgg-------gtagataaaatttag--ttttttgggtgaaaaatgtgcagaaatc 198  Q
    |||| |||||||| ||||||||||| |||||||| |||||||||||||       |||||| |||||| |  |||||| ||||||||||||||| |||||    
T  47975055 tgttcaggttgtagaataatcatagattaagttttctatcaaatttggaatttgggtagatgaaatttgggtttttttcggtgaaaaatgtgcaaaaatc 47975154  T
Q  199 gtaacagcaggg-aaaaactcgctaggagttcgctgttggcgaaacactctataacaattttgctattagc 268  Q
    ||||||| |||| ||||||||||||| |||||||| |||||||||| |||| ||||||||| |||||||||    
T  47975155 gtaacagtaggggaaaaactcgctagaagttcgctattggcgaaaccctctgtaacaatttcgctattagc 47975225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 69 - 156
Target Start/End: Original strand, 14188417 - 14188504
Alignment:
Q  69 gaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggttgtataataatcataggttaagtttcctatcaaatttggg 156  Q
    |||| |||||||||||||   ||||||||||||| |||||||| | |||||| |||||||||||||||||||||||||||||||||||    
T  14188417 gaaatgtgtagaaaccatcgaaattgtgttaagaattgatgttcaagttgtagaataatcataggttaagtttcctatcaaatttggg 14188504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 150 - 323
Target Start/End: Original strand, 24270159 - 24270329
Alignment:
Q  150 atttgggtagataaaattt-agttttttgggtgaaaaatgtgcagaaatcgtaacagcagggaaaaactcgctaggagttcgctgttggcgaaacactct 248  Q
    ||||| |||||| |||||| |||||||| ||||||||||||| |||||||||||     |||||||||||||||| |||||||| |||||||||  ||||    
T  24270159 atttgagtagatgaaatttgagtttttttggtgaaaaatgtgtagaaatcgtaag----gggaaaaactcgctagaagttcgctattggcgaaatcctct 24270254  T
Q  249 ataacaattttgctattagctaacttttcgccattagcgaaattgctcagtgacatcatactctgttttatgttc 323  Q
     ||||||||| | || |||| |  |||| ||| ||||| ||||||| |||||||| |||||  ||||| ||||||    
T  24270255 gtaacaatttcggtaatagccagatttttgccgttagcaaaattgcacagtgacaacataccttgtttcatgttc 24270329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 69 - 156
Target Start/End: Complemental strand, 11662034 - 11661947
Alignment:
Q  69 gaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggttgtataataatcataggttaagtttcctatcaaatttggg 156  Q
    |||||||||| |||||||   ||||||||||||| |||||||| |||||||| | |||| ||||||||||||||||||||||||||||    
T  11662034 gaaaagtgtaaaaaccatcgaaattgtgttaagaattgatgttcaggttgtagactaattataggttaagtttcctatcaaatttggg 11661947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 69 - 156
Target Start/End: Original strand, 23664246 - 23664333
Alignment:
Q  69 gaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggttgtataataatcataggttaagtttcctatcaaatttggg 156  Q
    |||||||||||||||||||  ||||||||||||| | |||||| || ||||| ||||| |||||||| ||||||||||||||||||||    
T  23664246 gaaaagtgtagaaaccatgacaattgtgttaagaatcgatgttcagattgtagaataaacataggttgagtttcctatcaaatttggg 23664333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 69 - 155
Target Start/End: Complemental strand, 11304116 - 11304030
Alignment:
Q  69 gaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggttgtataataatcataggttaagtttcctatcaaatttgg 155  Q
    |||||||||||||||||||  ||||||||||||| | |||||| || ||||| ||||| |||||||| |||||||||||||||||||    
T  11304116 gaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagattgtagaataaacataggttgagtttcctatcaaatttgg 11304030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 69 - 156
Target Start/End: Original strand, 1856524 - 1856611
Alignment:
Q  69 gaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggttgtataataatcataggttaagtttcctatcaaatttggg 156  Q
    ||||||||||||||||||   ||||||||||||| |||| ||| ||| |||| ||||| |||||||| ||||||||||||||||||||    
T  1856524 gaaaagtgtagaaaccatcgaaattgtgttaagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttggg 1856611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 69 - 156
Target Start/End: Complemental strand, 13256621 - 13256534
Alignment:
Q  69 gaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggttgtataataatcataggttaagtttcctatcaaatttggg 156  Q
    |||||||||||||| |||   ||||||||||||| |||||||| | ||||||  ||||||||||| ||||||||||||||||||||||    
T  13256621 gaaaagtgtagaaatcatcgaaattgtgttaagaattgatgttcaagttgtaggataatcataggataagtttcctatcaaatttggg 13256534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 69 - 156
Target Start/End: Original strand, 13917696 - 13917783
Alignment:
Q  69 gaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggttgtataataatcataggttaagtttcctatcaaatttggg 156  Q
    ||||||||||||||||||   ||||||||||||| |||| ||| ||| |||| ||||| |||||||| ||||||||||||||||||||    
T  13917696 gaaaagtgtagaaaccatcgaaattgtgttaagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttggg 13917783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 69 - 156
Target Start/End: Original strand, 16107982 - 16108069
Alignment:
Q  69 gaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggttgtataataatcataggttaagtttcctatcaaatttggg 156  Q
    ||||||||||||||||||   ||||||||||||| | |||||| || ||||| ||||| |||||||| ||||||||||||||||||||    
T  16107982 gaaaagtgtagaaaccatcgaaattgtgttaagaatcgatgttcagattgtagaataaacataggttgagtttcctatcaaatttggg 16108069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 69 - 156
Target Start/End: Original strand, 25926423 - 25926510
Alignment:
Q  69 gaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggttgtataataatcataggttaagtttcctatcaaatttggg 156  Q
    ||||||||||||||||||   ||||||||||||| |||| ||| ||| |||| ||||| |||||||| |||||||||| |||||||||    
T  25926423 gaaaagtgtagaaaccatcgaaattgtgttaagaattgaagttcaggctgtagaataaacataggttcagtttcctataaaatttggg 25926510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 14274115 - 14274063
Alignment:
Q  104 ttgatgtttaggttgtataataatcataggttaagtttcctatcaaatttggg 156  Q
    |||||||| |||||||| |||||||||||||||||||||||| ||||||||||    
T  14274115 ttgatgttcaggttgtagaataatcataggttaagtttcctaacaaatttggg 14274063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 69 - 156
Target Start/End: Complemental strand, 29797479 - 29797392
Alignment:
Q  69 gaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggttgtataataatcataggttaagtttcctatcaaatttggg 156  Q
    |||||||||||||| ||||  |||||||||| || | |||||| || ||||| ||||| |||| ||| ||||||||||||||||||||    
T  29797479 gaaaagtgtagaaatcatgacaattgtgttaggaatcgatgttcagattgtagaataaacatatgttgagtttcctatcaaatttggg 29797392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 69 - 156
Target Start/End: Complemental strand, 29801298 - 29801211
Alignment:
Q  69 gaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggttgtataataatcataggttaagtttcctatcaaatttggg 156  Q
    |||||||||||||| ||||  |||||||||| || | |||||| || ||||| ||||| |||| ||| ||||||||||||||||||||    
T  29801298 gaaaagtgtagaaatcatgacaattgtgttaggaatcgatgttcagattgtagaataaacatatgttgagtttcctatcaaatttggg 29801211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 98 - 167
Target Start/End: Original strand, 29052336 - 29052405
Alignment:
Q  98 taagacttgatgtttaggttgtataataatcataggttaagtttcctatcaaatttgggtagataaaatt 167  Q
    ||||| |||| ||| ||| |||| ||||| |||||||| ||||||||||||||||||||| ||| |||||    
T  29052336 taagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgggttgatgaaatt 29052405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 124 - 156
Target Start/End: Original strand, 17070470 - 17070502
Alignment:
Q  124 taatcataggttaagtttcctatcaaatttggg 156  Q
    |||||||||||||||||||||||||||||||||    
T  17070470 taatcataggttaagtttcctatcaaatttggg 17070502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 108 - 156
Target Start/End: Original strand, 13315245 - 13315293
Alignment:
Q  108 tgtttaggttgtataataatcataggttaagtttcctatcaaatttggg 156  Q
    |||| |||||||| |||||||||||||  ||||| ||||||||||||||    
T  13315245 tgttcaggttgtagaataatcataggtagagttttctatcaaatttggg 13315293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 154
Target Start/End: Original strand, 32160354 - 32160410
Alignment:
Q  98 taagacttgatgtttaggttgtataataatcataggttaagtttcctatcaaatttg 154  Q
    ||||| |||| ||| ||| |||| ||||| |||||||| ||||||||||||||||||    
T  32160354 taagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttg 32160410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 156; Significance: 8e-83; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 156; E-Value: 8e-83
Query Start/End: Original strand, 64 - 323
Target Start/End: Complemental strand, 9024 - 8762
Alignment:
Q  64 gattagaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggttgtataataatcataggttaagtttcctatcaaatttgggtagataa 163  Q
    ||||||||||||||||||||||||  ||||||||||||| |||||||| |||||||| |||||||||| ||||||||||||||||||||||||||||| |    
T  9024 gattagaaaagtgtagaaaccatggcaattgtgttaagaattgatgttcaggttgtagaataatcatatgttaagtttcctatcaaatttgggtagatga 8925  T
Q  164 aatttag--ttttttgggtgaaaaatgtgcagaaatcgtaacagc-agggaaaaactcgctaggagttcgctgttggcgaaacactctataacaattttg 260  Q
    ||||| |  |||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||| || ||||||| |||| ||||||||| |    
T  8924 aatttggttttttttggatgaaaaatgtgcagaaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaaccctctgtaacaatttcg 8825  T
Q  261 ctattagctaacttttcgccattagcgaaattgctcagtgacatcatactctgttttatgttc 323  Q
    ||||||||||| |||||||||||||||||||| |   |||||| ||||| |||||| ||||||    
T  8824 ctattagctaagttttcgccattagcgaaattacatggtgacaacataccctgtttcatgttc 8762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 146; Significance: 7e-77; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 69 - 323
Target Start/End: Complemental strand, 2053 - 1790
Alignment:
Q  69 gaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggttgtataataatcataggttaagtttcctatcaaatttggg-------tagat 161  Q
    ||||||||||||||| |||||||||||||||||| ||||||||||||||||| ||||||| |||||||||||||||||||||||||||       || ||    
T  2053 gaaaagtgtagaaactatgctaattgtgttaagaattgatgtttaggttgtagaataatcgtaggttaagtttcctatcaaatttgggatttgggtatat 1954  T
Q  162 aaaatttag-ttttttgggtgaaaaatgtgcagaaatcgtaacagcaggg-aaaaactcgctaggagttcgctgttggcgaaacactctataacaatttt 259  Q
     |||||| | |||||||| |||||||||||||||||||||||||| |||| ||||||||||||| |||||||| |||||||| | |||| |||||||||     
T  1953 gaaatttgggttttttggatgaaaaatgtgcagaaatcgtaacagtaggggaaaaactcgctagaagttcgctattggcgaatccctctgtaacaatttc 1854  T
Q  260 gctattagctaacttttcgccattagcgaaattgctcagtgacatcatactctgttttatgttc 323  Q
    |||||| ||||||||||||| ||||||||||||||||||||||| ||||| |||||||||||||    
T  1853 gctattcgctaacttttcgctattagcgaaattgctcagtgacagcataccctgttttatgttc 1790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 145; Significance: 3e-76; HSPs: 15)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 69 - 323
Target Start/End: Original strand, 45574143 - 45574399
Alignment:
Q  69 gaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggttgtataataatcataggttaagtttcctatcaaatttgggtagataaaattt 168  Q
    |||||||| |||||||||   ||||||||||||| |||||||| |||||||| |||||||||||||||||||||||||||||||||||||||| ||||||    
T  45574143 gaaaagtgcagaaaccatcgaaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttgggtagatgaaattt 45574242  T
Q  169 ag-ttttttgggtgaaaaatgtgcagaaatcgtaacagc-agggaaaaactcgctaggagttcgctgttggcgaaacactctataacaattttgctatta 266  Q
     | |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||| || ||||||| | || |||| |||| |||||||    
T  45574243 ggtttttttgggtgaaaaatgtgcagaaatcgtaacagcaagggaaaaactcgctaggatttcgctattagcgaaactccctgtaactatttcgctatta 45574342  T
Q  267 gctaacttttcgccattagcgaaattgctcagtgacatcatactctgttttatgttc 323  Q
    ||| ||||||||| || ||||||||||| | |||||| ||||| |||||||||||||    
T  45574343 gctcacttttcgctatcagcgaaattgcccggtgacagcataccctgttttatgttc 45574399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 108 - 323
Target Start/End: Original strand, 7052177 - 7052402
Alignment:
Q  108 tgtttaggttgtataataatcataggttaagtttcctatcaaatttggg-------tagataaaatttag--ttttttgggtgaaaaatgtgcagaaatc 198  Q
    |||| |||||||| ||||||||||||||||||||||||||| |||||||       ||||| |||||| |  ||||||||||||||||||||||||||||    
T  7052177 tgttcaggttgtaaaataatcataggttaagtttcctatcatatttgggatttgggtagatgaaatttgggtttttttgggtgaaaaatgtgcagaaatc 7052276  T
Q  199 gtaacagcaggg-aaaaactcgctaggagttcgctgttggcgaaacactctataacaattttgctattagctaacttttcgccattagcgaaattgctca 297  Q
    ||||||| |||| ||||||||||||| |||||||| |||||||| |||||| ||||||||| ||||||||||||||||||||||||||||||||||| ||    
T  7052277 gtaacagtaggggaaaaactcgctagaagttcgctattggcgaatcactctgtaacaatttcgctattagctaacttttcgccattagcgaaattgcaca 7052376  T
Q  298 gtgacatcatactctgttttatgttc 323  Q
    |||||| ||||| |||||||||||||    
T  7052377 gtgacagcatacactgttttatgttc 7052402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 69 - 323
Target Start/End: Original strand, 22130149 - 22130412
Alignment:
Q  69 gaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggttgtataataatcataggttaagtttcctatcaaatttggg-------tagat 161  Q
    ||||||||||||||||||   ||||||||||||| |||||||| |||||||| |||||||||||||||||||||||||||||||||||       |||||    
T  22130149 gaaaagtgtagaaaccatcaaaattgtgttaagaattgatgttaaggttgtagaataatcataggttaagtttcctatcaaatttgggatttgggtagat 22130248  T
Q  162 aaaatttagtttttt-gggtgaaaaatgtgcagaaatcgtaacagca-gggaaaaactcgctaggagttcgctgttggcgaaacactctataacaatttt 259  Q
     |||||| ||||||| ||||||||||| ||||||||||||||||||| |||||||||||||||||| |||||| || ||||||| | || |||| ||||     
T  22130249 gaaatttggtttttttgggtgaaaaatatgcagaaatcgtaacagcaagggaaaaactcgctaggatttcgctattagcgaaactccctgtaactatttc 22130348  T
Q  260 gctattagctaacttttcgccattagcgaaattgctcagtgacatcatactctgttttatgttc 323  Q
    |||||||||| | ||||||| || ||||||| ||| |||||||| ||||| |||||||||||||    
T  22130349 gctattagctcaattttcgctatcagcgaaactgcccagtgacagcataccctgttttatgttc 22130412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 104 - 323
Target Start/End: Original strand, 23194671 - 23194898
Alignment:
Q  104 ttgatgtttaggttgtataataatcataggttaagtttcctatcaaatttgg-------gtagataaaatttagtttttt-gggtgaaaaatgtgcagaa 195  Q
    |||||||| |||||||| ||||||||||||||||||||||||||||||||||       |||||| |||||| ||||||| |||| |||| | |||||||    
T  23194671 ttgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttggagtttgggtagatgaaatttggtttttttgggtaaaaattctgcagaa 23194770  T
Q  196 atcgtaacagca-gggaaaaactcgctaggagttcgctgttggcgaaacactctataacaattttgctattagctaacttttcgccattagcgaaattgc 294  Q
    |||||||||||| |||||||||||||||| |||||||| || ||||||| | || |||| |||| |||||||||| ||||||||||||||||||||||||    
T  23194771 atcgtaacagcaagggaaaaactcgctagtagttcgctattagcgaaactc-ctgtaactatttcgctattagctcacttttcgccattagcgaaattgc 23194869  T
Q  295 tcagtgacatcatactctgttttatgttc 323  Q
     |||||||| ||||| |||||||||||||    
T  23194870 ccagtgacagcataccctgttttatgttc 23194898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 27 - 154
Target Start/End: Original strand, 13880617 - 13880745
Alignment:
Q  27 tttgggaattgggaattaggtttttcattgttgagtc-gattagaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggttgtataata 125  Q
    |||| ||||||||||||||||||| |||||||||||  |||||||||||||||||||||||| |||||||||||||| |||||||| |||||||| ||||    
T  13880617 tttgagaattgggaattaggttttccattgttgagtttgattagaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaata 13880716  T
Q  126 atcataggttaagtttcctatcaaatttg 154  Q
    |||||||||||||||||||| ||||||||    
T  13880717 atcataggttaagtttcctaacaaatttg 13880745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 108 - 232
Target Start/End: Original strand, 24723624 - 24723757
Alignment:
Q  108 tgtttaggttgtataataatcataggttaagtttcctatcaaatttggg-------tagataaaatttag-ttttttgggtgaaaaatgtgcagaaatcg 199  Q
    |||| |||||||| |||||||||||||||||||||||||||||||||||       || || |||||| | |||||||||||||||||||||||||||||    
T  24723624 tgttcaggttgtagaataatcataggttaagtttcctatcaaatttgggatttgggtaaatgaaatttgggttttttgggtgaaaaatgtgcagaaatcg 24723723  T
Q  200 taacagca-gggaaaaactcgctaggagttcgct 232  Q
    |||||||| |||||||||||||||| ||||||||    
T  24723724 taacagcaggggaaaaactcgctagaagttcgct 24723757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 122 - 248
Target Start/End: Complemental strand, 8306478 - 8306344
Alignment:
Q  122 aataatcataggttaagtttcctatcaaatttggg-------tagataaaatttag-ttttttgggtgaaaaatgtgcagaaatcgtaacagcaggg-aa 212  Q
    |||||||||||||||||||||||||||||||||||       ||||| |||||| | ||||||||||||||| ||||||||||||||||||| |||| ||    
T  8306478 aataatcataggttaagtttcctatcaaatttgggatttgggtagatgaaattttggttttttgggtgaaaa-tgtgcagaaatcgtaacagtaggggaa 8306380  T
Q  213 aaactcgctaggagttcgctgttggcgaaacactct 248  Q
    ||||| |||||||||||||| |||||||||||||||    
T  8306379 aaacttgctaggagttcgctattggcgaaacactct 8306344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 69 - 156
Target Start/End: Complemental strand, 297284 - 297197
Alignment:
Q  69 gaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggttgtataataatcataggttaagtttcctatcaaatttggg 156  Q
    |||||||||||||||||||  ||||||||||||| | |||||| |||||||| ||||| |||||||| ||||||||||||||||||||    
T  297284 gaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcaggttgtagaataaacataggttgagtttcctatcaaatttggg 297197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 18 - 98
Target Start/End: Complemental strand, 20058463 - 20058382
Alignment:
Q  18 gttcttgattttgggaattgggaattaggtttttcattgttga-gtcgattagaaaagtgtagaaaccatgctaattgtgtt 98  Q
    |||||||||||| |||||||||||||||||||| |||||||||  ||||||||||||||||||||||||||  |||||||||    
T  20058463 gttcttgattttaggaattgggaattaggttttccattgttgatttcgattagaaaagtgtagaaaccatggcaattgtgtt 20058382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 69 - 154
Target Start/End: Complemental strand, 28313277 - 28313192
Alignment:
Q  69 gaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggttgtataataatcataggttaagtttcctatcaaatttg 154  Q
    |||||||||| |||||||   ||||||||||||| |||||||| |||||||  |||||||||||||||||||||||||||||||||    
T  28313277 gaaaagtgtaaaaaccatcgaaattgtgttaagaattgatgttcaggttgtggaataatcataggttaagtttcctatcaaatttg 28313192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 124 - 156
Target Start/End: Original strand, 38056853 - 38056885
Alignment:
Q  124 taatcataggttaagtttcctatcaaatttggg 156  Q
    |||||||||||||||||||||||||||||||||    
T  38056853 taatcataggttaagtttcctatcaaatttggg 38056885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 124 - 155
Target Start/End: Original strand, 8276170 - 8276201
Alignment:
Q  124 taatcataggttaagtttcctatcaaatttgg 155  Q
    ||||||||||||||||||||||||||||||||    
T  8276170 taatcataggttaagtttcctatcaaatttgg 8276201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 156
Target Start/End: Original strand, 46197899 - 46197957
Alignment:
Q  98 taagacttgatgtttaggttgtataataatcataggttaagtttcctatcaaatttggg 156  Q
    ||||| |||| ||| ||| |||| ||||| |||||||| ||||||||||||||||||||    
T  46197899 taagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttggg 46197957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 108 - 156
Target Start/End: Complemental strand, 6834054 - 6834006
Alignment:
Q  108 tgtttaggttgtataataatcataggttaagtttcctatcaaatttggg 156  Q
    |||| |||||||| |||||||||||||  ||||| ||||||||||||||    
T  6834054 tgttcaggttgtagaataatcataggtagagttttctatcaaatttggg 6834006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 108 - 156
Target Start/End: Original strand, 17901966 - 17902014
Alignment:
Q  108 tgtttaggttgtataataatcataggttaagtttcctatcaaatttggg 156  Q
    |||| |||||||| |||||||||||||  ||||| ||||||||||||||    
T  17901966 tgttcaggttgtagaataatcataggtagagttttctatcaaatttggg 17902014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 141; Significance: 7e-74; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 69 - 323
Target Start/End: Original strand, 25483565 - 25483821
Alignment:
Q  69 gaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggttgtataataatcataggttaagtttcctatcaaatttgggtagataaaattt 168  Q
    ||||||||||||||||||   ||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| ||||||    
T  25483565 gaaaagtgtagaaaccatcgaaattgtgttaagaattgatgtttaggttgtagaataatcataggttaagtttcctatcaaatttgggaagatgaaattt 25483664  T
Q  169 -agttttttgggtgaaaaatgtgcagaaatcgtaacagc-agggaaaaactcgctaggagttcgctgttggcgaaacactctataacaattttgctatta 266  Q
       ||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| |||||| || ||||||| | || |||| ||||||||||||    
T  25483665 gttttttttgggtgaaaaatgtgcagaaatggtaacagcaagggaaaaactcgctaggatttcgctattagcgaaactccctttaactattttgctatta 25483764  T
Q  267 gctaacttttcgccattagcgaaattgctcagtgacatcatactctgttttatgttc 323  Q
    ||| ||||||||| || |||||||||||  ||||||| ||||| || ||||||||||    
T  25483765 gctcacttttcgctatcagcgaaattgcctagtgacagcataccctattttatgttc 25483821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 98 - 323
Target Start/End: Complemental strand, 22483678 - 22483451
Alignment:
Q  98 taagacttgatgtttaggttgtataataatcataggttaagtttcctatcaaatttgggtagataaaatttag--ttttttgggtgaaaaatgtgcagaa 195  Q
    ||||| |||||||| |||||||| ||||| |||||||| ||||||||||  ||||||||||||| |||||| |  |||||||||||| ||||||||||||    
T  22483678 taagaattgatgttcaggttgtagaataaacataggttgagtttcctattgaatttgggtagatgaaatttgggtttttttgggtgataaatgtgcagaa 22483579  T
Q  196 atcgtaacagcagggaaaaactcgctaggagttcgctgttggcgaaacactctataacaattttgctattagctaacttttcgccattagcgaaattgct 295  Q
    |||||||||||| || |||||||||||| |||||||| ||||| |||  || | ||||||||| |||||||||||  ||||||||||||| ||||||||     
T  22483578 atcgtaacagcaagggaaaactcgctagaagttcgctattggcaaaatcctatgtaacaatttcgctattagctagattttcgccattagtgaaattgca 22483479  T
Q  296 cagtgacatcatactctgttttatgttc 323  Q
    |||||||| ||||| |||||| ||||||    
T  22483478 cagtgacaacataccctgtttcatgttc 22483451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 116 - 323
Target Start/End: Original strand, 36732656 - 36732871
Alignment:
Q  116 ttgtataataatcataggttaagtttcctatcaaatttggg-------tagataaaatttag-ttttttgggtgaaaaatgtgcagaaatcgtaacagca 207  Q
    ||||| ||||||||||||| |||||||||||||||||||||       ||||  |||||| | |||||||||||||||||||||||||||||||||||||    
T  36732656 ttgtagaataatcataggtcaagtttcctatcaaatttgggatttgggtagacgaaatttgggttttttgggtgaaaaatgtgcagaaatcgtaacagca 36732755  T
Q  208 gggaaaaactcgctaggagttcgctgttggcgaaacactctataacaattttgctattagctaacttttcgccattagcgaaattgctcagtgacatcat 307  Q
     ||||||||||||||| |||||||| |||||||    |||| ||||||||| |||||||||||| |||||||||||||||||||||| |||||||| |||    
T  36732756 tggaaaaactcgctagaagttcgctattggcgatttcctctgtaacaatttcgctattagctaaattttcgccattagcgaaattgcacagtgacagcat 36732855  T
Q  308 actctgttttatgttc 323  Q
    ||  ||||||||||||    
T  36732856 accttgttttatgttc 36732871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 18 - 150
Target Start/End: Complemental strand, 20463175 - 20463042
Alignment:
Q  18 gttcttgattttgggaattgggaattaggtttttcattgttgagtc-gattagaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggt 116  Q
    ||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||||||||||||| |||||||||||||| |||||||| ||||    
T  20463175 gttcttgattttgggaattgggaattaggttttccattgttgagtttgattagaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggt 20463076  T
Q  117 tgtataataatcataggttaagtttcctatcaaa 150  Q
    |||| |||||||||||||||||||||||| ||||    
T  20463075 tgtagaataatcataggttaagtttcctaacaaa 20463042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 25 - 154
Target Start/End: Original strand, 17460286 - 17460416
Alignment:
Q  25 attttgggaattgggaattaggtttttcattgttgagtc-gattagaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggttgtataa 123  Q
    |||||||||||||||||||||||||| |||||||||||  |||||||||||||||||||||||| |||||||||||||| |||||||| |||||||| ||    
T  17460286 attttgggaattgggaattaggttttccattgttgagtttgattagaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaa 17460385  T
Q  124 taatcataggttaagtttcctatcaaatttg 154  Q
    |||||||||||||||||||| | ||||||||    
T  17460386 taatcataggttaagtttccaaacaaatttg 17460416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 27 - 154
Target Start/End: Complemental strand, 23661268 - 23661140
Alignment:
Q  27 tttgggaattgggaattaggtttttcattgttgagtc-gattagaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggttgtataata 125  Q
    |||| ||||||||||||||||||| |||||||||||  |||||||||||||||||||||||| |||||||||||||| |||||||| |||||||| ||||    
T  23661268 tttgagaattgggaattaggttttccattgttgagtttgattagaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaata 23661169  T
Q  126 atcataggttaagtttcctatcaaatttg 154  Q
    |||||||||||||||||||| ||||||||    
T  23661168 atcataggttaagtttcctaacaaatttg 23661140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 52 - 153
Target Start/End: Complemental strand, 20455933 - 20455831
Alignment:
Q  52 cattgttgagtc-gattagaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggttgtataataatcataggttaagtttcctatcaaa 150  Q
    |||||||||||  |||||||||||||||||||||||| |||||||||||||| |||||||| |||||||| |||||||||||||||||||||||| ||||    
T  20455933 cattgttgagtttgattagaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcctaacaaa 20455834  T
Q  151 ttt 153  Q
    |||    
T  20455833 ttt 20455831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 69 - 156
Target Start/End: Original strand, 8413872 - 8413959
Alignment:
Q  69 gaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggttgtataataatcataggttaagtttcctatcaaatttggg 156  Q
    ||||||||||||||||||   ||||||||||||| |||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  8413872 gaaaagtgtagaaaccatcgaaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttggg 8413959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 69 - 156
Target Start/End: Complemental strand, 19882876 - 19882789
Alignment:
Q  69 gaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggttgtataataatcataggttaagtttcctatcaaatttggg 156  Q
    ||||||||||||||||||   ||||||||||| | |||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  19882876 gaaaagtgtagaaaccatcgaaattgtgttaaaaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttggg 19882789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 74 - 153
Target Start/End: Complemental strand, 20460888 - 20460809
Alignment:
Q  74 gtgtagaaaccatgctaattgtgttaagacttgatgtttaggttgtataataatcataggttaagtttcctatcaaattt 153  Q
    |||||||||||||| |||||||||||||| |||||||| |||||||| |||||||||||||||||||||||| |||||||    
T  20460888 gtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcctaacaaattt 20460809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 74 - 153
Target Start/End: Complemental strand, 20455174 - 20455095
Alignment:
Q  74 gtgtagaaaccatgctaattgtgttaagacttgatgtttaggttgtataataatcataggttaagtttcctatcaaattt 153  Q
    |||||||||||||| |||||||||||||| |||||||| |||||||| |||||||||||||||||| ||||| |||||||    
T  20455174 gtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtgtcctaacaaattt 20455095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 69 - 155
Target Start/End: Original strand, 14397034 - 14397120
Alignment:
Q  69 gaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggttgtataataatcataggttaagtttcctatcaaatttgg 155  Q
    ||||||||||||||||||   ||||||||||||| |||| ||| ||| |||| ||||| |||||||| |||||||||||||||||||    
T  14397034 gaaaagtgtagaaaccatcgaaattgtgttaagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgg 14397120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 22 - 84
Target Start/End: Original strand, 22920048 - 22920113
Alignment:
Q  22 ttgattttgggaattgggaattaggtttttc-attgttga--gtcgattagaaaagtgtagaaacc 84  Q
    ||||||||||||||||||||||||||||||| ||||||||   | |||||||||||||||||||||    
T  22920048 ttgattttgggaattgggaattaggtttttcaattgttgaattttgattagaaaagtgtagaaacc 22920113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 69 - 156
Target Start/End: Complemental strand, 11775642 - 11775564
Alignment:
Q  69 gaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggttgtataataatcataggttaagtttcctatcaaatttggg 156  Q
    ||||||||||||||||||   ||||||||||||| |||||||| |         ||||||||||||||||||||||||||||||||||    
T  11775642 gaaaagtgtagaaaccatcgaaattgtgttaagaattgatgttca---------ataatcataggttaagtttcctatcaaatttggg 11775564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 98 - 156
Target Start/End: Original strand, 25657668 - 25657726
Alignment:
Q  98 taagacttgatgtttaggttgtataataatcataggttaagtttcctatcaaatttggg 156  Q
    ||||| |||||||| ||| |||| ||||| |||||||| ||||||||||||||||||||    
T  25657668 taagaattgatgttcaggctgtagaataaacataggttgagtttcctatcaaatttggg 25657726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 98 - 167
Target Start/End: Complemental strand, 19880721 - 19880652
Alignment:
Q  98 taagacttgatgtttaggttgtataataatcataggttaagtttcctatcaaatttgggtagataaaatt 167  Q
    ||||| |||| ||| ||| |||| ||||| |||||||| ||||||||||||||||||||| ||| |||||    
T  19880721 taagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgggttgatgaaatt 19880652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 156
Target Start/End: Complemental strand, 16198734 - 16198676
Alignment:
Q  98 taagacttgatgtttaggttgtataataatcataggttaagtttcctatcaaatttggg 156  Q
    ||||| |||| ||| ||| |||| ||||| |||||||| ||||||||||||||||||||    
T  16198734 taagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttggg 16198676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 117 - 167
Target Start/End: Complemental strand, 26454585 - 26454535
Alignment:
Q  117 tgtataataatcataggttaagtttcctatcaaatttgggtagataaaatt 167  Q
    |||| ||||| |||||||| ||||||||||||||||||||| ||| |||||    
T  26454585 tgtagaataaacataggttgagtttcctatcaaatttgggttgatgaaatt 26454535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 108 - 156
Target Start/End: Original strand, 12037328 - 12037376
Alignment:
Q  108 tgtttaggttgtataataatcataggttaagtttcctatcaaatttggg 156  Q
    ||||||||||||| |||||||||||||  ||  ||||||||||||||||    
T  12037328 tgtttaggttgtagaataatcataggtagagactcctatcaaatttggg 12037376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 128; Significance: 4e-66; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 113 - 322
Target Start/End: Original strand, 1383821 - 1384032
Alignment:
Q  113 aggttgtataataatcataggttaagtttcctatcaaatttgggtagataaaattta-gttttttgggtgaaaaatgtgcagaaatcgtaacagcagg-g 210  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||| ||||||  |||||||||||||||||||||||||||||||||||||||| |    
T  1383821 aggttgtagaataatcataggttaagtttcctatcaaatttgggtagatgaaatttgtgttttttgggtgaaaaatgtgcagaaatcgtaacagcaggag 1383920  T
Q  211 aaaaactcgctaggagttcgctgttggcgaaacactctataacaattttgctattagctaacttttcgccattagcgaaattgctcagtgacatcatact 310  Q
    | ||||||||||| |||||||| |||||||||  |||| |||| |||| || ||||||||||||||||||||||||||||||||  ||||||| |||||     
T  1383921 agaaactcgctagaagttcgctattggcgaaatcctctgtaacgatttcgcgattagctaacttttcgccattagcgaaattgcaaagtgacagcatacc 1384020  T
Q  311 ctgttttatgtt 322  Q
    |||||| |||||    
T  1384021 ctgtttcatgtt 1384032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 69 - 323
Target Start/End: Original strand, 20590406 - 20590669
Alignment:
Q  69 gaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggttgtataataatcataggttaagtttcctatcaaatttggg-------tagat 161  Q
    |||||||||||||||||||  ||||||||||||| |||||||| |||| ||| |||||||||||||||||||| ||||||||||||||       |||||    
T  20590406 gaaaagtgtagaaaccatggcaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagttttctatcaaatttggggtttgggtagat 20590505  T
Q  162 aaaatttagttttt-tgggtgaaaaatgtgcagaaatcgtaacagca-gggaaaaactcgctaggagttcgctgttggcgaaacactctataacaatttt 259  Q
     |||||| |||||| |||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| || ||||||| | || |||| ||||     
T  20590506 gaaatttggtttttctgggtgaaaattgtgcagaaatcgtaacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactatttc 20590605  T
Q  260 gctattagctaacttttcgccattagcgaaattgctcagtgacatcatactctgttttatgttc 323  Q
    |||||||||| | |||||||||||||||||||||  |||||||| ||| | |||||||||||||    
T  20590606 gctattagctcagttttcgccattagcgaaattgaccagtgacagcattccctgttttatgttc 20590669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 122 - 323
Target Start/End: Original strand, 149684 - 149894
Alignment:
Q  122 aataatcataggttaagtttcctatcaaatttggg-------tagataaaatttag-ttttttgggtgaaaaatgtgcagaaatcgtaacagcagggaa- 212  Q
    |||||||||||||||||||||||||||||||||||       ||||| |||||| | ||||||||||||||||||||| |||||||||||||||||| |     
T  149684 aataatcataggttaagtttcctatcaaatttgggatttgggtagatgaaatttgggttttttgggtgaaaaatgtgcggaaatcgtaacagcaggggag 149783  T
Q  213 aaactcgctaggagttcgctgttggcgaaacactctataacaattttgctattagctaacttttcgccattagcgaaattgctcagtgacatcatactct 312  Q
    ||||||||||| |||||||| || ||||||| |||| || |||||| ||||||||||||||||||||||||||||||||||| |||||||| ||||| ||    
T  149784 aaactcgctagaagttcgctattagcgaaaccctctgtagcaatttcgctattagctaacttttcgccattagcgaaattgcacagtgacagcataccct 149883  T
Q  313 gttttatgttc 323  Q
    |||||||||||    
T  149884 gttttatgttc 149894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 108 - 323
Target Start/End: Original strand, 36734616 - 36734832
Alignment:
Q  108 tgtttaggttgtataataatcataggttaagtttcctatcaaatttgggtagataaaatttagttttttgggtgaaaaa-tgtgcagaaatcgtaacagc 206  Q
    |||| |||||||| ||||||| |||||||||||||||||||||||||||||||| |||||| | ||||| ||||||||| |||| |||||| ||||||||    
T  36734616 tgttcaggttgtagaataatcttaggttaagtttcctatcaaatttgggtagatgaaatttgggtttttaggtgaaaaagtgtgtagaaattgtaacagc 36734715  T
Q  207 agggaaaaactcgctaggagttcgctgttggcgaaacactctataacaattttgctattagctaacttttcgccattagcgaaattgctcagtgacatca 306  Q
    |||| |||||||||||| |||||||| |||||||||  |||| |||||||||  | | ||||||  |||||||||||||||||||||| | |||||| ||    
T  36734716 aggggaaaactcgctagaagttcgctattggcgaaatcctctgtaacaatttcaccaatagctagattttcgccattagcgaaattgcactgtgacaaca 36734815  T
Q  307 tactctgttttatgttc 323  Q
    |||||||||||||||||    
T  36734816 tactctgttttatgttc 36734832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 69 - 322
Target Start/End: Original strand, 41301053 - 41301319
Alignment:
Q  69 gaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggttgtataataatcataggttaagtttcctatcaaa-------tttgggtagat 161  Q
    ||||||||||||||||||   ||||||||||||| |||||||| |||||||| |||||||||||||||||||||||||||||       |||||||||||    
T  41301053 gaaaagtgtagaaaccatcgaaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaaattgggatttgggtagat 41301152  T
Q  162 aaaatttag-ttttttgggtgaaaaatgtgcagaaatcgtaacagca-gggaaaaactcgctaggagttcgctgttggcgaaacactctataacaatttt 259  Q
     |||||| | ||||||||||||||||||||||||| |||||  |||| |||||||||||||||||| |||||| || ||||||| | || |||| ||||     
T  41301153 gaaatttggattttttgggtgaaaaatgtgcagaagtcgtagtagcaagggaaaaactcgctaggatttcgctattagcgaaactccctgtaactatttc 41301252  T
Q  260 gctattagctaacttttcgccattagcga----aattgctcagtgacatcatactctgttttatgtt 322  Q
    |||||||||| ||||||||| || |||||    ||||||||||||||| |||||  |||||||||||    
T  41301253 gctattagctcacttttcgctatcagcgaaattaattgctcagtgacagcataccttgttttatgtt 41301319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 113 - 323
Target Start/End: Original strand, 28345205 - 28345423
Alignment:
Q  113 aggttgtataataatcataggttaagtttcctatcaaatttggg-------tagataaaatttagttttttgggtgaaaaa-tgtgcagaaatcgtaaca 204  Q
    |||||||| |||||||||||||||||||||||||||||||||||       |||||||||||| | ||||||||||||||| |||| |||||||||||||    
T  28345205 aggttgtagaataatcataggttaagtttcctatcaaatttgggatttaggtagataaaatttgggtttttgggtgaaaaagtgtgtagaaatcgtaaca 28345304  T
Q  205 gcagggaaaaactcgctaggagttcgctgttggcgaaacactctataacaattttgctattagctaacttttcgccattagcgaaattgctcagtgacat 304  Q
    ||| || |||||||||||| |||||||| |||||||||  |||| ||||||||| |||| |||| |   ||||||||||||||||||||| ||||||||     
T  28345305 gcatgggaaaactcgctagaagttcgctattggcgaaatcctctgtaacaatttcgctaatagccagagtttcgccattagcgaaattgcacagtgacag 28345404  T
Q  305 catactctgttttatgttc 323  Q
    ||||| ||| || ||||||    
T  28345405 cataccctgattcatgttc 28345423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 27 - 156
Target Start/End: Original strand, 22173058 - 22173188
Alignment:
Q  27 tttgggaattgggaattaggtttttcattgttgagtc-gattagaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggttgtataata 125  Q
    |||| ||||||||||||||||||| |||||||||||  |||||||||||||||||||||||| |||||||||||||| |||||||| |||||||| ||||    
T  22173058 tttgagaattgggaattaggttttccattgttgagtttgattagaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaata 22173157  T
Q  126 atcataggttaagtttcctatcaaatttggg 156  Q
    ||||||||||| |||| ||| ||||||||||    
T  22173158 atcataggttatgttttctaacaaatttggg 22173188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 33 - 156
Target Start/End: Complemental strand, 7187391 - 7187267
Alignment:
Q  33 aattgggaattaggtttttcattgttgagtc-gattagaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggttgtataataatcata 131  Q
    |||||||||||||||||| |||||||||||  |||||||||||||||||||||||| |||||||||||||| ||||||||  ||||||| ||||||||||    
T  7187391 aattgggaattaggttttccattgttgagtttgattagaaaagtgtagaaaccatgataattgtgttaagaattgatgttctggttgtagaataatcata 7187292  T
Q  132 ggttaagtttcctatcaaatttggg 156  Q
    | |||||||||||| ||||||||||    
T  7187291 gattaagtttcctaacaaatttggg 7187267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 35 - 157
Target Start/End: Original strand, 43707136 - 43707259
Alignment:
Q  35 ttgggaattaggtttttcattgttgagtc-gattagaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggttgtataataatcatagg 133  Q
    |||||||||||||||| ||||||||| |  ||||||||||||||||||||||||  ||||||||||||| |||||||| | |||||| ||||||||||||    
T  43707136 ttgggaattaggttttccattgttgaatttgattagaaaagtgtagaaaccatggcaattgtgttaagaattgatgttcaagttgtagaataatcatagg 43707235  T
Q  134 ttaagtttcctatcaaatttgggt 157  Q
    ||||||||||||||||||||||||    
T  43707236 ttaagtttcctatcaaatttgggt 43707259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 69 - 156
Target Start/End: Original strand, 13100858 - 13100945
Alignment:
Q  69 gaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggttgtataataatcataggttaagtttcctatcaaatttggg 156  Q
    |||||||||||||||||||  ||||||||||||| | |||||| ||  |||| |||||||||||||||||||||||||||||||||||    
T  13100858 gaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagactgtagaataatcataggttaagtttcctatcaaatttggg 13100945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 69 - 156
Target Start/End: Original strand, 21072812 - 21072899
Alignment:
Q  69 gaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggttgtataataatcataggttaagtttcctatcaaatttggg 156  Q
    |||||||||| |||||||   ||||||||||||| |||||||| |||||||  |||||||||||||||||||||||||||||||||||    
T  21072812 gaaaagtgtaaaaaccatcgaaattgtgttaagaattgatgttcaggttgtggaataatcataggttaagtttcctatcaaatttggg 21072899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 69 - 156
Target Start/End: Original strand, 23338523 - 23338610
Alignment:
Q  69 gaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggttgtataataatcataggttaagtttcctatcaaatttggg 156  Q
    |||||||||||||||||||  ||||||||||||| | |||||| |||||||| ||||| |||||||| ||||||||||||||||||||    
T  23338523 gaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcaggttgtagaataaacataggttgagtttcctatcaaatttggg 23338610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 87
Target Start/End: Complemental strand, 31521148 - 31521078
Alignment:
Q  18 gttcttgattttgggaattgggaattaggtttttcattgttgag-tcgattagaaaagtgtagaaaccatg 87  Q
    |||||||||||||||||||||||||||||||||  ||||||||| ||||||||||||||||||||||||||    
T  31521148 gttcttgattttgggaattgggaattaggttttcaattgttgagttcgattagaaaagtgtagaaaccatg 31521078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 69 - 156
Target Start/End: Original strand, 10684056 - 10684143
Alignment:
Q  69 gaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggttgtataataatcataggttaagtttcctatcaaatttggg 156  Q
    |||||||||||||| ||||  ||||||||||||| | |||||| || ||||| ||||| |||| ||| ||||||||||||||||||||    
T  10684056 gaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaataaacatatgttgagtttcctatcaaatttggg 10684143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 69 - 156
Target Start/End: Complemental strand, 20262088 - 20262001
Alignment:
Q  69 gaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggttgtataataatcataggttaagtttcctatcaaatttggg 156  Q
    |||||||||||||| ||||  ||||||||||||| | |||||| || ||||| ||||| |||| ||| ||||||||||||||||||||    
T  20262088 gaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaataaacatatgttgagtttcctatcaaatttggg 20262001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 69 - 155
Target Start/End: Complemental strand, 31346048 - 31345962
Alignment:
Q  69 gaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggttgtataataatcataggttaagtttcctatcaaatttgg 155  Q
    ||||||||||||||||||   ||||||||||||| |||| ||| ||| | || ||||| |||||||| |||||||||||||||||||    
T  31346048 gaaaagtgtagaaaccatcgaaattgtgttaagaattgaagttcaggctatagaataaacataggttgagtttcctatcaaatttgg 31345962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 113 - 156
Target Start/End: Complemental strand, 31521061 - 31521018
Alignment:
Q  113 aggttgtataataatcataggttaagtttcctatcaaatttggg 156  Q
    |||||||| |||||||||||||||||||||||| | ||||||||    
T  31521061 aggttgtagaataatcataggttaagtttcctaactaatttggg 31521018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 156
Target Start/End: Original strand, 18358121 - 18358179
Alignment:
Q  98 taagacttgatgtttaggttgtataataatcataggttaagtttcctatcaaatttggg 156  Q
    ||||| |||| ||| ||| |||| ||||| |||||||| ||||||||||||||||||||    
T  18358121 taagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttggg 18358179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 156
Target Start/End: Complemental strand, 19647132 - 19647074
Alignment:
Q  98 taagacttgatgtttaggttgtataataatcataggttaagtttcctatcaaatttggg 156  Q
    ||||| |||||||| |||||||| |||||  |||||| | |||||||||||||||||||    
T  19647132 taagaattgatgttcaggttgtagaataacaataggtaatgtttcctatcaaatttggg 19647074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 126; Significance: 6e-65; HSPs: 22)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 69 - 323
Target Start/End: Original strand, 16277411 - 16277674
Alignment:
Q  69 gaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggttgtataataatcataggttaagtttcctatcaaatttggg-------tagat 161  Q
    |||||||||||||||||||  ||||||||||||| |||||||| |||| ||| |||||||||||||||||||||||||||||||||||       |||||    
T  16277411 gaaaagtgtagaaaccatggcaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagat 16277510  T
Q  162 aaaatttagttttt-tgggtgaaaaatgtgcagaaatcgtaacagca-gggaaaaactcgctaggagttcgctgttggcgaaacactctataacaatttt 259  Q
     ||| || |||||| |||||||||| ||||||||||||| ||||||| ||||||||||||||||||||||||| || ||||||| | || |||| ||||     
T  16277511 gaaaattggtttttctgggtgaaaattgtgcagaaatcgcaacagcaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactatttc 16277610  T
Q  260 gctattagctaacttttcgccattagcgaaattgctcagtgacatcatactctgttttatgttc 323  Q
    |||||||||| | |||||||||||||||||||||| |||||||| ||| | |||||||||||||    
T  16277611 gctattagcttagttttcgccattagcgaaattgcccagtgacagcattccctgttttatgttc 16277674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 108 - 322
Target Start/End: Original strand, 19434823 - 19435046
Alignment:
Q  108 tgtttaggttgtataataatcataggttaagtttcctatcaaatttggg-------tagataaaattt-agttttttgggtgaaaaatgtgcagaaatcg 199  Q
    |||| |||||||| |||||||||||||||||||||||||||||||||||       ||||| |||||| |||||||||||||||||||||||||||||||    
T  19434823 tgttcaggttgtagaataatcataggttaagtttcctatcaaatttgggattttggtagatgaaatttgagttttttgggtgaaaaatgtgcagaaatcg 19434922  T
Q  200 taacagcaggg-aaaaactcgctaggagttcgctgttggcgaaacactctataacaattttgctattagctaacttttcgccattagcgaaattgctcag 298  Q
    |||||| |||| ||||||||||||| |||| ||| |||||||| | |||| ||||||||| ||||||||||| || ||||| |||||||||||||| |||    
T  19434923 taacagtaggggaaaaactcgctagaagtttgctattggcgaatccctctgtaacaatttcgctattagctacctgttcgctattagcgaaattgcacag 19435022  T
Q  299 tgacatcatactctgttttatgtt 322  Q
    ||||| ||||||||||||||||||    
T  19435023 tgacaacatactctgttttatgtt 19435046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 69 - 323
Target Start/End: Original strand, 53387021 - 53387284
Alignment:
Q  69 gaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggttgtataataatcataggttaagtttcctatcaaatttggg-------tagat 161  Q
    |||||||||||||||||||  ||||||||||||| |||||||| |||| ||| |||||||||||||||||||||||||||||||||||       |||||    
T  53387021 gaaaagtgtagaaaccatggcaattgtgttaagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagat 53387120  T
Q  162 aaaatttagttttt-tgggtgaaaaatgtgcagaaatcgtaacagca-gggaaaaactcgctaggagttcgctgttggcgaaacactctataacaatttt 259  Q
     ||| || |||||| |||||||||| ||||||||||||||||||| | ||||||||||||||||||||||||| || ||||||| | || |||| ||||     
T  53387121 gaaaattggtttttctgggtgaaaattgtgcagaaatcgtaacagtaagggaaaaactcgctaggagttcgctattagcgaaactccctgtaactatttc 53387220  T
Q  260 gctattagctaacttttcgccattagcgaaattgctcagtgacatcatactctgttttatgttc 323  Q
    |||||| ||| | |||||||||||||||||||||  |||||||| ||| | |||||||||||||    
T  53387221 gctattcgctcagttttcgccattagcgaaattgtccagtgacaacattccctgttttatgttc 53387284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 108 - 323
Target Start/End: Complemental strand, 35660776 - 35660551
Alignment:
Q  108 tgtttaggttgtataataatcataggttaagtttcctatcaaatttggg-------tagataaaatttag--ttttttgggtgaaaaatgtgcagaaatc 198  Q
    |||| |||||||| |||||||||| ||||||||||||||||||||||||       ||||| |||||| |  |||||| |||||||||||||||||||||    
T  35660776 tgttcaggttgtagaataatcatatgttaagtttcctatcaaatttgggatttgggtagatgaaatttgggttttttttggtgaaaaatgtgcagaaatc 35660677  T
Q  199 gtaacagcaggg-aaaaactcgctaggagttcgctgttggcgaaacactctataacaattttgctattagctaacttttcgccattagcgaaattgctca 297  Q
    |||||||||||| ||||||||||||| |||||||| |||||||||  |||| ||||||||| |||||| |||||||||| ||||||||||||||||| ||    
T  35660676 gtaacagcaggggaaaaactcgctagaagttcgctattggcgaaatcctctgtaacaatttcgctattcgctaactttttgccattagcgaaattgcaca 35660577  T
Q  298 gtgacatcatactctgttttatgttc 323  Q
    |||||| |||||  ||||||||||||    
T  35660576 gtgacagcataccatgttttatgttc 35660551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 18 - 156
Target Start/End: Complemental strand, 15344915 - 15344776
Alignment:
Q  18 gttcttgattttgggaattgggaattaggtttttcattgttgagt-cgattagaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggt 116  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||| ||||  ||||||||||||| |||||||| ||||    
T  15344915 gttcttgattttgggaattgggaattaggttttccattgttgagttcgattagaaaagtgtagaaatcatgacaattgtgttaagaattgatgttcaggt 15344816  T
Q  117 tgtataataatcataggttaagtttcctatcaaatttggg 156  Q
    |||| |||||||||||||||||||||||| ||||||||||    
T  15344815 tgtagaataatcataggttaagtttcctaacaaatttggg 15344776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 18 - 154
Target Start/End: Original strand, 15447449 - 15447586
Alignment:
Q  18 gttcttgattttgggaattgggaattaggtttttcattgttgagt-cgattagaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggt 116  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| ||||||||||  ||||||||||||| |||||||| ||||    
T  15447449 gttcttgattttgggaattgggaattaggttttccattgttgagttcgattagaaaagtgcagaaaccatgacaattgtgttaagaattgatgttcaggt 15447548  T
Q  117 tgtataataatcataggttaagtttcctatcaaatttg 154  Q
    |||| |||||||||||||||||||| ||| ||||||||    
T  15447549 tgtagaataatcataggttaagtttgctaacaaatttg 15447586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 27 - 154
Target Start/End: Original strand, 23802485 - 23802613
Alignment:
Q  27 tttgggaattgggaattaggtttttcattgttgagtc-gattagaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggttgtataata 125  Q
    |||| ||||||||||||||||||| |||||||||||  |||||||||||||||||||||||| |||||||||||||| |||||||| |||||||| ||||    
T  23802485 tttgagaattgggaattaggttttccattgttgagtttgattagaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaata 23802584  T
Q  126 atcataggttaagtttcctatcaaatttg 154  Q
    |||||||||||||||||||| ||||||||    
T  23802585 atcataggttaagtttcctaacaaatttg 23802613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 33 - 156
Target Start/End: Complemental strand, 12611876 - 12611752
Alignment:
Q  33 aattgggaattaggtttttcattgttgagtc-gattagaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggttgtataataatcata 131  Q
    |||||||||||||||||| |||||||||||  |||||||||||||||||||||||| |||||||||||||| |||||||| |||||||| ||||||||||    
T  12611876 aattgggaattaggttttccattgttgagtttgattagaaaagtgtagaaaccatgataattgtgttaagaattgatgttcaggttgtagaataatcata 12611777  T
Q  132 ggttaagtttcctatcaaatttggg 156  Q
    |||||||||| ||| ||||||||||    
T  12611776 ggttaagttttctaacaaatttggg 12611752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 33 - 156
Target Start/End: Original strand, 51463115 - 51463239
Alignment:
Q  33 aattgggaattaggtttttcattgttgagtc-gattagaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggttgtataataatcata 131  Q
    |||||||||||||||||| |||||||||||  |||||||||||||||||||||||| |||||||||||||| |||||||| |||||||| ||||||||||    
T  51463115 aattgggaattaggttttccattgttgagtttgattagaaaagtgtagaaaccatgataattgtgttaagaattgatgttcaggttgtagaataatcata 51463214  T
Q  132 ggttaagtttcctatcaaatttggg 156  Q
    ||| |||||| ||| ||||||||||    
T  51463215 ggtaaagttttctaacaaatttggg 51463239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 18 - 156
Target Start/End: Original strand, 13043841 - 13043980
Alignment:
Q  18 gttcttgattttgggaattgggaattaggtttttcattgttgagtc-gattagaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggt 116  Q
    ||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||||||||||||  |||||||||||||| |||||||| ||||    
T  13043841 gttcttgattttgggaattgggaattaggttttccattgttgagtttgattagaaaagtgtagaaaccatagtaattgtgttaagaattgatgttcaggt 13043940  T
Q  117 tgtataataatcataggttaagtttcctatcaaatttggg 156  Q
    |||| |||||  |||||| | ||| | |||||||||||||    
T  13043941 tgtagaataacaataggtgatgttccttatcaaatttggg 13043980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 108 - 268
Target Start/End: Complemental strand, 14549538 - 14549368
Alignment:
Q  108 tgtttaggttgtataataatcataggttaagtttcctatcaaatttggg-------tagataaaatttag--ttttttgggtgaaaaatgtgcagaaatc 198  Q
    |||| |||||||| |||||||||| ||||||||||||||||||||||||       ||||| |||||| |  ||||||||||||||||||||||||||||    
T  14549538 tgttcaggttgtagaataatcatatgttaagtttcctatcaaatttgggatttgggtagatgaaatttgggtttttttgggtgaaaaatgtgcagaaatc 14549439  T
Q  199 gtaacagca-gggaaaaactcgctaggagttcgctgttggcgaaacactctataacaattttgctattagc 268  Q
    ||||||| | |||||||||||||||| ||||| || |||||||| | |||| ||||||||| |||||||||    
T  14549438 gtaacagtaggggaaaaactcgctagaagttctctattggcgaatccctctgtaacaatttcgctattagc 14549368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 108 - 256
Target Start/End: Complemental strand, 16296759 - 16296602
Alignment:
Q  108 tgtttaggttgtataataatcataggttaagtttcctatcaaatttggg-------tagataaaatttag-ttttttgggtgaaaaatgtgcagaaatcg 199  Q
    |||| |||||||  |||||||||||||||||||||||||||||||||||       ||||| |||||| | ||||||||||||||||||||||||||| |    
T  16296759 tgttcaggttgttgaataatcataggttaagtttcctatcaaatttgggatttgggtagattaaattttggttttttgggtgaaaaatgtgcagaaattg 16296660  T
Q  200 taacag-cagggaaaaactcgctaggagttcgctgttggcgaaacactctataacaat 256  Q
    ||||||  ||||||||||||||||| |||||||| |||||||| | |||| |||||||    
T  16296659 taacagtaagggaaaaactcgctagaagttcgctattggcgaatccctctgtaacaat 16296602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 69 - 156
Target Start/End: Complemental strand, 28386172 - 28386085
Alignment:
Q  69 gaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggttgtataataatcataggttaagtttcctatcaaatttggg 156  Q
    ||||||||||||||||||   ||||||||||||| |||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  28386172 gaaaagtgtagaaaccatcgaaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttggg 28386085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 69 - 156
Target Start/End: Complemental strand, 18230669 - 18230582
Alignment:
Q  69 gaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggttgtataataatcataggttaagtttcctatcaaatttggg 156  Q
    |||||||||||||| |||   ||||||||||||| |||||||| ||||||||  ||||||||||| ||||||||||||||||||||||    
T  18230669 gaaaagtgtagaaatcatcgaaattgtgttaagaattgatgttcaggttgtaggataatcataggataagtttcctatcaaatttggg 18230582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 69 - 156
Target Start/End: Complemental strand, 33849671 - 33849584
Alignment:
Q  69 gaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggttgtataataatcataggttaagtttcctatcaaatttggg 156  Q
    |||||||||||||||||||  ||||||||||||| | |||||| | |||||| ||||| |||||||| ||||||||||||||||||||    
T  33849671 gaaaagtgtagaaaccatgacaattgtgttaagaatcgatgttcatgttgtagaataaacataggttgagtttcctatcaaatttggg 33849584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 69 - 156
Target Start/End: Original strand, 49547067 - 49547154
Alignment:
Q  69 gaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggttgtataataatcataggttaagtttcctatcaaatttggg 156  Q
    |||||||||||||||||||  ||||||||||||| | |||||| || ||||| ||||| |||||||| ||||||||||||||||||||    
T  49547067 gaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagattgtagaataaacataggttgagtttcctatcaaatttggg 49547154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 69 - 156
Target Start/End: Complemental strand, 36038739 - 36038652
Alignment:
Q  69 gaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggttgtataataatcataggttaagtttcctatcaaatttggg 156  Q
    ||||||||||||||| |||  ||||||||||||| | |||||| || ||||| ||||| |||||||| ||||||||||||||||||||    
T  36038739 gaaaagtgtagaaacgatggcaattgtgttaagaatcgatgttcagattgtagaataaacataggttgagtttcctatcaaatttggg 36038652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 69 - 156
Target Start/End: Complemental strand, 15535050 - 15534963
Alignment:
Q  69 gaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggttgtataataatcataggttaagtttcctatcaaatttggg 156  Q
    |||||||||||||| ||||  ||||||||||||| | |||||| || ||||| ||||| |||| ||| ||||||||||||||||||||    
T  15535050 gaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaataaacatatgttgagtttcctatcaaatttggg 15534963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 237 - 323
Target Start/End: Original strand, 630164 - 630250
Alignment:
Q  237 gcgaaacactctataacaattttgctattagctaacttttcgccattagcgaaattgctcagtgacatcatactctgttttatgttc 323  Q
    ||||||| | || |||| |||| |||||||||| | ||||||| || ||||||||||| |||||||| ||||| |||||||||||||    
T  630164 gcgaaactccctgtaactatttcgctattagctcatttttcgctatcagcgaaattgcccagtgacagcataccctgttttatgttc 630250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 124 - 156
Target Start/End: Complemental strand, 9638881 - 9638849
Alignment:
Q  124 taatcataggttaagtttcctatcaaatttggg 156  Q
    |||||||||||||||||||||||||||||||||    
T  9638881 taatcataggttaagtttcctatcaaatttggg 9638849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 156
Target Start/End: Original strand, 10694399 - 10694457
Alignment:
Q  98 taagacttgatgtttaggttgtataataatcataggttaagtttcctatcaaatttggg 156  Q
    ||||| |||| ||| ||| |||| ||||| |||||||| ||||||||||||||||||||    
T  10694399 taagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttggg 10694457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 154
Target Start/End: Original strand, 10908165 - 10908221
Alignment:
Q  98 taagacttgatgtttaggttgtataataatcataggttaagtttcctatcaaatttg 154  Q
    ||||| |||| ||| ||| |||| ||||| |||||||| ||||||||||||||||||    
T  10908165 taagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttg 10908221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 122; Significance: 1e-62; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 69 - 323
Target Start/End: Complemental strand, 18419380 - 18419117
Alignment:
Q  69 gaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggttgtataataatcataggttaagtttcctatcaaatttg-------ggtagat 161  Q
    ||||||||||||||||||   ||||||||||||| |||||||| |||||||| ||||||||||| |||||||||||||||||||||       |||||||    
T  18419380 gaaaagtgtagaaaccatcgaaattgtgttaagaattgatgttcaggttgtagaataatcatagattaagtttcctatcaaatttgagatttgggtagat 18419281  T
Q  162 aaaatttagtttttt-gggtgaaaaatgtgcagaaatcgtaacagca-gggaaaaactcgctaggagttcgctgttggcgaaacactctataacaatttt 259  Q
     |||||| ||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| |||||| || ||||||| | || |||| ||||     
T  18419280 gaaatttggtttttttgggtgaaaaatgtgcagaaatcgtaacagcaagggaaaaactcgctaggatttcgctattagcgaaactccctgtaactatttc 18419181  T
Q  260 gctattagctaacttttcgccattagcgaaattgctcagtgacatcatactctgttttatgttc 323  Q
    |||||||||  ||||||||| || | ||||||||| |||||||| ||||| |||||||||||||    
T  18419180 gctattagcccacttttcgctatcaacgaaattgcccagtgacagcataccctgttttatgttc 18419117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 108 - 323
Target Start/End: Original strand, 36508907 - 36509131
Alignment:
Q  108 tgtttaggttgtataataatcataggttaagtttcctatcaaatttggg-------tagataaaatttag-ttttttgggtgaaaaatgtgcagaaatcg 199  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||       ||||| |||||| | |||||||||||||||||||| ||||||||    
T  36508907 tgtttaggttgtagaataatcataggttaagtttcctatcaaatttgggatttaggtagatcaaatttgggttttttgggtgaaaaatgtgtagaaatcg 36509006  T
Q  200 taacagcagggaaa-aactcgctaggagttcgctgttggcgaaacactctataacaattttgctattagctaacttttcgccattagcgaaattgctcag 298  Q
    |||||| |||| || |||||||||| |||||||| |||||||| | |||| ||||||||| |||||||||||||||||||| |||||| |||||||  ||    
T  36509007 taacagtaggggaagaactcgctagaagttcgctattggcgaatccctctgtaacaatttcgctattagctaacttttcgctattagcaaaattgcctag 36509106  T
Q  299 tgacatcatactctgttttatgttc 323  Q
    ||||| ||||| |||||| ||||||    
T  36509107 tgacaacataccctgtttcatgttc 36509131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 104 - 323
Target Start/End: Original strand, 24668316 - 24668544
Alignment:
Q  104 ttgatgtttaggttgtataataatcataggttaagtttcctatcaaatttggg-------tagataaaatttagtttttt-gggtgaaaaatgtgcagaa 195  Q
    |||||||| |||| ||| |||||||||||||||||||||||||||||||||||       ||||| | |||| ||||||| ||||||||| |||||| ||    
T  24668316 ttgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgacatttggtttttttgggtgaaaattgtgcataa 24668415  T
Q  196 atcgtaacagca-gggaaaaactcgctaggagttcgctgttggcgaaacactctataacaattttgctattagctaacttttcgccattagcgaaattgc 294  Q
    |||||||||||| ||| ||||||||||||||||||||| || ||||||| | || |||| |||| |||||||||| | ||||||||||||||||| ||||    
T  24668416 atcgtaacagcaaggggaaaactcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagctcaattttcgccattagcgaatttgc 24668515  T
Q  295 tcagtgacatcatactctgttttatgttc 323  Q
     |||||||| ||| | |||||||||||||    
T  24668516 ccagtgacagcattccctgttttatgttc 24668544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 104 - 323
Target Start/End: Original strand, 24738085 - 24738313
Alignment:
Q  104 ttgatgtttaggttgtataataatcataggttaagtttcctatcaaatttggg-------tagataaaatttagtttttt-gggtgaaaaatgtgcagaa 195  Q
    |||||||| |||| ||| |||||||||||||||||||||||||||||||||||       ||||| | |||| ||||||| ||||||||| |||||| ||    
T  24738085 ttgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgacatttggtttttttgggtgaaaattgtgcataa 24738184  T
Q  196 atcgtaacagca-gggaaaaactcgctaggagttcgctgttggcgaaacactctataacaattttgctattagctaacttttcgccattagcgaaattgc 294  Q
    |||||||||||| ||| ||||||||||||||||||||| || ||||||| | || |||| |||| |||||||||| | ||||||||||||||||| ||||    
T  24738185 atcgtaacagcaaggggaaaactcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagctcaattttcgccattagcgaatttgc 24738284  T
Q  295 tcagtgacatcatactctgttttatgttc 323  Q
     |||||||| ||| | |||||||||||||    
T  24738285 ccagtgacagcattccctgttttatgttc 24738313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 104 - 323
Target Start/End: Original strand, 24750854 - 24751082
Alignment:
Q  104 ttgatgtttaggttgtataataatcataggttaagtttcctatcaaatttggg-------tagataaaatttagtttttt-gggtgaaaaatgtgcagaa 195  Q
    |||||||| |||| ||| |||||||||||||||||||||||||||||||||||       ||||| | |||| ||||||| ||||||||| |||||| ||    
T  24750854 ttgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgacatttggtttttttgggtgaaaattgtgcataa 24750953  T
Q  196 atcgtaacagca-gggaaaaactcgctaggagttcgctgttggcgaaacactctataacaattttgctattagctaacttttcgccattagcgaaattgc 294  Q
    |||||||||||| ||| ||||||||||||||||||||| || ||||||| | || |||| |||| |||||||||| | ||||||||||||||||| ||||    
T  24750954 atcgtaacagcaaggggaaaactcgctaggagttcgctattagcgaaactccctgtaactatttcgctattagctcaattttcgccattagcgaatttgc 24751053  T
Q  295 tcagtgacatcatactctgttttatgttc 323  Q
     |||||||| ||| | |||||||||||||    
T  24751054 ccagtgacagcattccctgttttatgttc 24751082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 27 - 154
Target Start/End: Complemental strand, 22413058 - 22412930
Alignment:
Q  27 tttgggaattgggaattaggtttttcattgttgagtc-gattagaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggttgtataata 125  Q
    |||| ||||||||||||||||||| |||||||||||  |||||||||||||||||||||||| |||||||||||||| |||||||||| |||||| ||||    
T  22413058 tttgagaattgggaattaggttttccattgttgagtttgattagaaaagtgtagaaaccatggtaattgtgttaagaattgatgtttatgttgtagaata 22412959  T
Q  126 atcataggttaagtttcctatcaaatttg 154  Q
    |||||||||||||||| ||| ||||||||    
T  22412958 atcataggttaagttttctaacaaatttg 22412930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 150 - 323
Target Start/End: Original strand, 16604776 - 16604951
Alignment:
Q  150 atttgggtagataaaatttag-ttttttgggtgaaaaatgtgcagaaatcgtaacagcaggg-aaaaactcgctaggagttcgctgttggcgaaacactc 247  Q
    ||||| |||||| |||||| | |||||||||||||||||||| ||||||||||| ||||||| ||||||||| ||| |||||||| |||||||||  |||    
T  16604776 atttgagtagatgaaatttggattttttgggtgaaaaatgtgaagaaatcgtaatagcaggggaaaaactcgatagaagttcgctattggcgaaatcctc 16604875  T
Q  248 tataacaattttgctattagctaacttttcgccattagcgaaattgctcagtgacatcatactctgttttatgttc 323  Q
    | ||||||| | ||||||||| |  |||||||||||||||||||||| ||||| || ||||| |||||| ||||||    
T  16604876 tgtaacaatctcgctattagcaagattttcgccattagcgaaattgcacagtggcagcataccctgtttcatgttc 16604951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 104 - 234
Target Start/End: Original strand, 24594222 - 24594361
Alignment:
Q  104 ttgatgtttaggttgtataataatcataggttaagtttcctatcaaatttggg-------tagataaaatttagtttt-ttgggtgaaaaatgtgcagaa 195  Q
    |||||||| |||| ||| |||||||||||||||||||||||||||||||||||       ||||| |||||| ||||| ||||||||||| |||||||||    
T  24594222 ttgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggtttgggtagatgaaatttggtttttttgggtgaaaattgtgcagaa 24594321  T
Q  196 atcgtaacagc-agggaaaaactcgctaggagttcgctgt 234  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  24594322 atcgtaacagcaagggaaaaactcgctaggagttcgctgt 24594361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 69 - 156
Target Start/End: Original strand, 27868698 - 27868785
Alignment:
Q  69 gaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggttgtataataatcataggttaagtttcctatcaaatttggg 156  Q
    ||||||||||||||||||   ||||||||||||| |||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  27868698 gaaaagtgtagaaaccatcgaaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttggg 27868785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 69 - 156
Target Start/End: Original strand, 33472687 - 33472774
Alignment:
Q  69 gaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggttgtataataatcataggttaagtttcctatcaaatttggg 156  Q
    ||||||||||||||||||   ||||||||||||| |||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  33472687 gaaaagtgtagaaaccatcgaaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttggg 33472774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 69 - 156
Target Start/End: Original strand, 41875716 - 41875803
Alignment:
Q  69 gaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggttgtataataatcataggttaagtttcctatcaaatttggg 156  Q
    |||||||||||||||||||  ||||||||||||| | |||||| ||  |||| |||||||||||||||||||||||||||||||||||    
T  41875716 gaaaagtgtagaaaccatggcaattgtgttaagaatcgatgttcagactgtagaataatcataggttaagtttcctatcaaatttggg 41875803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 69 - 156
Target Start/End: Complemental strand, 9777034 - 9776947
Alignment:
Q  69 gaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggttgtataataatcataggttaagtttcctatcaaatttggg 156  Q
    |||||||||||||| ||||  |||| |||||||| | |||||| || ||||| ||||| |||||||||||||||||||||||||||||    
T  9777034 gaaaagtgtagaaatcatgacaattatgttaagaatcgatgttcagattgtagaataaacataggttaagtttcctatcaaatttggg 9776947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 69 - 156
Target Start/End: Original strand, 37804196 - 37804283
Alignment:
Q  69 gaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggttgtataataatcataggttaagtttcctatcaaatttggg 156  Q
    |||||||||||||| ||||  ||||||||||||| | |||||| || ||||| ||||| |||| ||| ||||||||||||||||||||    
T  37804196 gaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaataaacatatgttgagtttcctatcaaatttggg 37804283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 227 - 323
Target Start/End: Original strand, 24617174 - 24617270
Alignment:
Q  227 ttcgctgttggcgaaacactctataacaattttgctattagctaacttttcgccattagcgaaattgctcagtgacatcatactctgttttatgttc 323  Q
    |||||| || ||||||| | || |||| |||| |||||||||| | |||| ||||||||||||||||| |||||||| ||| |  ||||||||||||    
T  24617174 ttcgctattagcgaaactccctctaactatttcgctattagctcaatttttgccattagcgaaattgcccagtgacagcattccttgttttatgttc 24617270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 227 - 323
Target Start/End: Original strand, 24713405 - 24713501
Alignment:
Q  227 ttcgctgttggcgaaacactctataacaattttgctattagctaacttttcgccattagcgaaattgctcagtgacatcatactctgttttatgttc 323  Q
    |||||| || ||||||| | || |||| |||| |||||||||| | |||| ||||||||||||||||| |||||||| ||| |  ||||||||||||    
T  24713405 ttcgcttttagcgaaactccctgtaactatttcgctattagctcaatttttgccattagcgaaattgcccagtgacaacattccttgttttatgttc 24713501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 227 - 323
Target Start/End: Original strand, 24746433 - 24746529
Alignment:
Q  227 ttcgctgttggcgaaacactctataacaattttgctattagctaacttttcgccattagcgaaattgctcagtgacatcatactctgttttatgttc 323  Q
    |||||| || ||||||| | || |||| |||| |||||||||| | |||| ||||||||||||||||| |||||||| ||| |  ||||||||||||    
T  24746433 ttcgctattagcgaaactccctctaactatttcgctattagctcaatttttgccattagcgaaattgcccagtgacagcattccttgttttatgttc 24746529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 105 - 156
Target Start/End: Original strand, 30138244 - 30138295
Alignment:
Q  105 tgatgtttaggttgtataataatcataggttaagtttcctatcaaatttggg 156  Q
    ||||||| |||||||| |||||||||||||||||||||| | ||||||||||    
T  30138244 tgatgttcaggttgtagaataatcataggttaagtttccaaacaaatttggg 30138295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 105 - 156
Target Start/End: Complemental strand, 21504030 - 21503979
Alignment:
Q  105 tgatgtttaggttgtataataatcataggttaagtttcctatcaaatttggg 156  Q
    ||||||| |||||||| |||||||||||||| ||||||||||  ||||||||    
T  21504030 tgatgttcaggttgtagaataatcataggttgagtttcctattgaatttggg 21503979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 156
Target Start/End: Complemental strand, 265936 - 265878
Alignment:
Q  98 taagacttgatgtttaggttgtataataatcataggttaagtttcctatcaaatttggg 156  Q
    ||||| |||| ||| ||| |||| ||||| |||||||| ||||||||||||||||||||    
T  265936 taagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttggg 265878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 156
Target Start/End: Complemental strand, 17011626 - 17011568
Alignment:
Q  98 taagacttgatgtttaggttgtataataatcataggttaagtttcctatcaaatttggg 156  Q
    ||||| |||| ||| ||| |||| ||||| |||||||| ||||||||||||||||||||    
T  17011626 taagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttggg 17011568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 104 - 152
Target Start/End: Complemental strand, 16063575 - 16063527
Alignment:
Q  104 ttgatgtttaggttgtataataatcataggttaagtttcctatcaaatt 152  Q
    ||||||||||||||||| ||||| | ||||| | |||||||||||||||    
T  16063575 ttgatgtttaggttgtagaataaacctaggtaatgtttcctatcaaatt 16063527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 154
Target Start/End: Complemental strand, 29448738 - 29448682
Alignment:
Q  98 taagacttgatgtttaggttgtataataatcataggttaagtttcctatcaaatttg 154  Q
    ||||| |||| ||| ||| |||| ||||| |||||||| ||||||||||||||||||    
T  29448738 taagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttg 29448682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 120; Significance: 2e-61; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 98 - 323
Target Start/End: Original strand, 8951 - 9178
Alignment:
Q  98 taagacttgatgtttaggttgtataataatcataggttaagtttcctatcaaatttgggtagataaaatttag-ttttttgggtgaaaaatgtgcagaaa 196  Q
    ||||| |||||||| |||||||| ||||| | |||||| ||||||||||  ||||||||||||| |||||| | ||||||||||||||||| |||| |||    
T  8951 taagaattgatgttcaggttgtagaataaacttaggttgagtttcctattgaatttgggtagatgaaatttgggttttttgggtgaaaaatatgcataaa 9050  T
Q  197 tcgtaacagcaggg-aaaaactcgctaggagttcgctgttggcgaaacactctataacaattttgctattagctaacttttcgccattagcgaaattgct 295  Q
    ||||||| |||||| ||||||||||||| |||||||| |||||||||  |||| ||||||||| |||||||||||||||||| ||||||||||||||||     
T  9051 tcgtaactgcaggggaaaaactcgctagaagttcgctattggcgaaatcctctgtaacaatttcgctattagctaacttttcaccattagcgaaattgca 9150  T
Q  296 cagtgacatcatactctgttttatgttc 323  Q
    |||||||| ||||| |||||||||||||    
T  9151 cagtgacagcataccctgttttatgttc 9178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 114; Significance: 9e-58; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 69 - 323
Target Start/End: Complemental strand, 10023 - 9760
Alignment:
Q  69 gaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggttgtataataatcataggttaagtttcctatcaaa-------tttgggtagat 161  Q
    ||||||||||||||||||   ||||||||||||| |||||||| |||||||| |||||||||||||||||||||||||||||       |||||||||||    
T  10023 gaaaagtgtagaaaccatcgaaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaaattgggatttgggtagat 9924  T
Q  162 aaaatttag-ttttttgggtgaaaaatgtgcagaaatcgtaacagca-gggaaaaactcgctaggagttcgctgttggcgaaacactctataacaatttt 259  Q
     |||||| | ||||||||||||||||||||||||| |||||  |||| |||||||||||||||||| |||||| || ||||||| | || |||| ||||     
T  9923 gaaatttgggttttttgggtgaaaaatgtgcagaagtcgtagtagcaagggaaaaactcgctaggatttcgctattagcgaaactccctgtaactatttc 9824  T
Q  260 gctattagctaacttttcgccattagcgaaattgctcagtgacatcatactctgttttatgttc 323  Q
    |||||||||| | ||||||| || ||||||||| |||||||||| ||||  |||||||||||||    
T  9823 gctattagctcaattttcgctatcagcgaaatttctcagtgacagcataacctgttttatgttc 9760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 105; Significance: 2e-52; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 98 - 323
Target Start/End: Complemental strand, 22020 - 21786
Alignment:
Q  98 taagacttgatgtttaggttgtataataatcataggttaagtttcctatcaaatttggg-------tagataaaatttag-ttttttgggtgaaaaatgt 189  Q
    ||||| ||| |||| |||||||| |||||||||||||||||||||||||||||||||||       ||||| |||||| | |||||||||||||||||||    
T  22020 taagaattggtgttcaggttgtagaataatcataggttaagtttcctatcaaatttgggatttgggtagatgaaatttgggttttttgggtgaaaaatgt 21921  T
Q  190 gcagaaatcgtaacagcaggg-aaaaactcgctaggagttcgctgttggcgaaacactctataacaattttgctattagctaacttttcgccattagcga 288  Q
    ||||||||||||||||  ||| ||||||||||||| |||||||| |||||||||| || | ||||||||| ||||||||||||  |||||| ||||||||    
T  21920 gcagaaatcgtaacagtgggggaaaaactcgctagaagttcgctattggcgaaaccctttgtaacaatttcgctattagctaaagtttcgctattagcga 21821  T
Q  289 aattgctcagtgacatcatactctgttttatgttc 323  Q
    |||||  |||||||| ||||| || ||||||||||    
T  21820 aattgtacagtgacagcataccctattttatgttc 21786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 97; Significance: 1e-47; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 108 - 323
Target Start/End: Original strand, 106325 - 106550
Alignment:
Q  108 tgtttaggttgtataataatcataggttaagtttcctatcaaatttggg-------tagataaaatttag--ttttttgggtgaaaaatgtgcagaaatc 198  Q
    |||| |||||||| ||||||| |||||||||||||||||||||||||||       ||||| |||||| |  |||||| |||||||||||| ||||||||    
T  106325 tgttcaggttgtaaaataatcgtaggttaagtttcctatcaaatttgggagttcggtagatgaaatttgggtttttttaggtgaaaaatgttcagaaatc 106424  T
Q  199 gtaacagcaggg-aaaaactcgctaggagttcgctgttggcgaaacactctataacaattttgctattagctaacttttcgccattagcgaaattgctca 297  Q
    ||||||| |||| ||||||||||||  |||||||| |||||||| | |||| ||||||||| |||||| ||||||||||||| |||||||||||||| ||    
T  106425 gtaacagtaggggaaaaactcgctattagttcgctattggcgaatccctctgtaacaatttcgctattggctaacttttcgctattagcgaaattgcaca 106524  T
Q  298 gtgacatcatactctgttttatgttc 323  Q
    |||||| ||||  |||||||||||||    
T  106525 gtgacaacataacctgttttatgttc 106550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 91; Significance: 5e-44; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 25 - 154
Target Start/End: Complemental strand, 1046 - 916
Alignment:
Q  25 attttgggaattgggaattaggtttttcattgttgagtc-gattagaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggttgtataa 123  Q
    ||||||| |||||||||||||||||| |||||||||||  |||||||||||||||||||||||| |||||||||||||| |||||||| |||||||| ||    
T  1046 attttggaaattgggaattaggttttccattgttgagtttgattagaaaagtgtagaaaccatggtaattgtgttaagagttgatgttcaggttgtagaa 947  T
Q  124 taatcataggttaagtttcctatcaaatttg 154  Q
    |||||||||||||||||||||| ||||||||    
T  946 taatcataggttaagtttcctaacaaatttg 916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0956 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: scaffold0956
Description:

Target: scaffold0956; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 23 - 155
Target Start/End: Original strand, 2172 - 2305
Alignment:
Q  23 tgattttgggaattgggaattaggtttttcattgttgagtc-gattagaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggttgtat 121  Q
    |||||||||||||||||||||||||||| |||||||| ||  ||||||||||||||||||||||||  ||||||||||||| |||||||| ||||||||     
T  2172 tgattttgggaattgggaattaggttttccattgttgcgtttgattagaaaagtgtagaaaccatgacaattgtgttaagaattgatgttcaggttgtag 2271  T
Q  122 aataatcataggttaagtttcctatcaaatttgg 155  Q
    |||||||| |||||||||||||||||||||||||    
T  2272 aataatcacaggttaagtttcctatcaaatttgg 2305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 88; Significance: 3e-42; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 18 - 156
Target Start/End: Complemental strand, 21964 - 21825
Alignment:
Q  18 gttcttgattttgggaattgggaattaggtttttcattgttgagtc-gattagaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggt 116  Q
    ||||||||||||||||||||||||||||||||| |||||||||||  ||||| ||||||||||||||||||  ||||||||||| | |||||||| ||||    
T  21964 gttcttgattttgggaattgggaattaggttttccattgttgagtttgattacaaaagtgtagaaaccatggcaattgtgttaacaattgatgttcaggt 21865  T
Q  117 tgtataataatcataggttaagtttcctatcaaatttggg 156  Q
    |||| ||||||||||| ||||| |||||||||||||||||    
T  21864 tgtagaataatcatagattaagcttcctatcaaatttggg 21825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 88; Significance: 3e-42; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 18 - 156
Target Start/End: Complemental strand, 611780 - 611641
Alignment:
Q  18 gttcttgattttgggaattgggaattaggtttttcattgttgagt-cgattagaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggt 116  Q
    |||||||||||||||||||| |||||||||||| ||||||||||| |||||||||||||||||||||||||  |||||||||| || || ||||| ||||    
T  611780 gttcttgattttgggaattgagaattaggttttccattgttgagttcgattagaaaagtgtagaaaccatgacaattgtgttaggaattaatgttcaggt 611681  T
Q  117 tgtataataatcataggttaagtttcctatcaaatttggg 156  Q
     ||| |||||||||||||||||||||||| ||||||||||    
T  611680 ggtagaataatcataggttaagtttcctaacaaatttggg 611641  T

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Target: chr6; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 27 - 156
Target Start/End: Original strand, 20556113 - 20556243
Alignment:
Q  27 tttgggaattgggaattaggtttttcattgttgagtc-gattagaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggttgtataata 125  Q
    |||| ||||||||||||||||||| |||||||||||  |||||||||||||||||||||||| |||||||||||||| |||||||| |||||||| ||||    
T  20556113 tttgagaattgggaattaggttttccattgttgagtttgattagaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaata 20556212  T
Q  126 atcataggttaagtttcctatcaaatttggg 156  Q
    |||||||||||||||| ||| ||||||||||    
T  20556213 atcataggttaagttttctaacaaatttggg 20556243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 27 - 143
Target Start/End: Original strand, 14978622 - 14978739
Alignment:
Q  27 tttgggaattgggaattaggtttttcattgttgagtc-gattagaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggttgtataata 125  Q
    |||| ||||||||||||||||||| |||||||||||  |||||||||||||||||||||||| |||||||||||||| |||||||| |||||||| ||||    
T  14978622 tttgagaattgggaattaggttttccattgttgagtttgattagaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaata 14978721  T
Q  126 atcataggttaagtttcc 143  Q
    ||||||||||||||||||    
T  14978722 atcataggttaagtttcc 14978739  T

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Target: chr6; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 150 - 323
Target Start/End: Complemental strand, 19234964 - 19234790
Alignment:
Q  150 atttgggtagataaaattt-agttttttgggtgaaaaatgtgcagaaatcgtaacagca-gggaaaaactcgctaggagttcgctgttggcgaaacactc 247  Q
    ||||| |||||| |||||| |||||||||||||||||||||||||||||||||||| || |||||||||||||||| |||||||| |||||||||  |||    
T  19234964 atttgagtagatgaaatttgagttttttgggtgaaaaatgtgcagaaatcgtaacaacaggggaaaaactcgctagaagttcgctattggcgaaatcctc 19234865  T
Q  248 tataacaattttgctattagctaacttttcgccattagcgaaattgctcagtgacatcatactctgttttatgttc 323  Q
    | ||||||||| || | ||||  |  ||||||||||||||||||||| |||||||| ||||| |||||| ||||||    
T  19234864 tgtaacaatttcgcaaatagc-catatttcgccattagcgaaattgcacagtgacaacataccctgtttcatgttc 19234790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 27 - 154
Target Start/End: Original strand, 25618979 - 25619106
Alignment:
Q  27 tttgggaattgggaattaggtttttcattgttgagtc-gattagaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggttgtataata 125  Q
    |||| ||||||||||||||||||  |||||||||||  |||||| ||||||||||||||||| |||||||||||||| |||||||| |||||||| ||||    
T  25618979 tttgagaattgggaattaggtttc-cattgttgagtttgattaggaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggttgtagaata 25619077  T
Q  126 atcataggttaagtttcctatcaaatttg 154  Q
    |||||||||||||||||||| ||||||||    
T  25619078 atcataggttaagtttcctaacaaatttg 25619106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 113 - 323
Target Start/End: Complemental strand, 35057427 - 35057209
Alignment:
Q  113 aggttgtataataatcataggttaagtttcctatcaaatttggg-------tagataaaatttagttttttgggtgaaaaa-tgtgcagaaatcgtaaca 204  Q
    |||||||| ||||||| || ||||||||| ||||||||||||||       ||||| |||||| | ||||||||||||||| |||  |||||| ||||||    
T  35057427 aggttgtagaataatcttaagttaagttttctatcaaatttgggatttgggtagatgaaatttggatttttgggtgaaaaagtgtttagaaattgtaaca 35057328  T
Q  205 gcagggaaaaactcgctaggagttcgctgttggcgaaacactctataacaattttgctattagctaacttttcgccattagcgaaattgctcagtgacat 304  Q
    |||||| |||||||||||| |||||||| |||||||||  |||| |||||||||  ||| |||| |  |||||||||||||| ||||||| ||||||||     
T  35057327 gcaggggaaaactcgctagaagttcgctattggcgaaatcctctgtaacaatttcactaatagccagattttcgccattagcaaaattgcacagtgacag 35057228  T
Q  305 catactctgttttatgttc 323  Q
    ||||| |||||| ||||||    
T  35057227 cataccctgtttcatgttc 35057209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 69 - 156
Target Start/End: Complemental strand, 13765275 - 13765188
Alignment:
Q  69 gaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggttgtataataatcataggttaagtttcctatcaaatttggg 156  Q
    ||||||||||||||||||   ||||||||||||| |||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  13765275 gaaaagtgtagaaaccatcgaaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttggg 13765188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 69 - 156
Target Start/End: Complemental strand, 23956791 - 23956704
Alignment:
Q  69 gaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggttgtataataatcataggttaagtttcctatcaaatttggg 156  Q
    ||||||||||||||||||   ||||||||||||| |||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  23956791 gaaaagtgtagaaaccatcgaaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttggg 23956704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 69 - 154
Target Start/End: Original strand, 23225981 - 23226066
Alignment:
Q  69 gaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggttgtataataatcataggttaagtttcctatcaaatttg 154  Q
    ||||||||||||||||||   ||||||||||||| |||||||| |||||||| |||||||||||||||||||||||||||||||||    
T  23225981 gaaaagtgtagaaaccatcgaaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttg 23226066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 69 - 156
Target Start/End: Original strand, 31021845 - 31021932
Alignment:
Q  69 gaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggttgtataataatcataggttaagtttcctatcaaatttggg 156  Q
    ||||||||||||||| ||   ||||||||||||| |||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  31021845 gaaaagtgtagaaactatcgaaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttggg 31021932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 113 - 323
Target Start/End: Complemental strand, 13285631 - 13285413
Alignment:
Q  113 aggttgtataataatcataggttaagtttcctatcaaatttgggta-------gataaaatttagttttttgggtgaaaaa-tgtgcagaaatcgtaaca 204  Q
    |||||||| ||||||| || |||||||||||||||||||| |||         ||| |||||| | |||||||| |||||| |||| |||||||||||||    
T  13285631 aggttgtagaataatcttaagttaagtttcctatcaaattagggatttggaatgatgaaatttgggtttttgggcgaaaaagtgtgtagaaatcgtaaca 13285532  T
Q  205 gcagggaaaaactcgctaggagttcgctgttggcgaaacactctataacaattttgctattagctaacttttcgccattagcgaaattgctcagtgacat 304  Q
    | || | |||||||||||| |||| ||| |||||||||  |||| ||||||||| || | |||  |  |||||||||||||||||||||| || ||||||    
T  13285531 gtagcggaaaactcgctagaagtttgctattggcgaaatcctctgtaacaatttcgcgaatagacagattttcgccattagcgaaattgcacaatgacat 13285432  T
Q  305 catactctgttttatgttc 323  Q
    |||||  ||||| ||||||    
T  13285431 cataccatgtttcatgttc 13285413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 69 - 156
Target Start/End: Original strand, 28288630 - 28288717
Alignment:
Q  69 gaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggttgtataataatcataggttaagtttcctatcaaatttggg 156  Q
    |||||||||||||| ||||  ||||||||||||| | |||||| || ||||| ||||| |||||||| ||||||||||||||||||||    
T  28288630 gaaaagtgtagaaatcatgacaattgtgttaagaatcgatgttcagattgtagaataaacataggttgagtttcctatcaaatttggg 28288717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 69 - 156
Target Start/End: Complemental strand, 12943058 - 12942971
Alignment:
Q  69 gaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggttgtataataatcataggttaagtttcctatcaaatttggg 156  Q
    ||||||||||||||| |||  ||||||||||||| | |||||| || ||||| |||||  ||||||| ||||||||||||||||||||    
T  12943058 gaaaagtgtagaaacgatggcaattgtgttaagaatcgatgttcagattgtagaataaatataggttgagtttcctatcaaatttggg 12942971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 69 - 156
Target Start/End: Complemental strand, 23415833 - 23415746
Alignment:
Q  69 gaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggttgtataataatcataggttaagtttcctatcaaatttggg 156  Q
    |||||| |||||||||||   ||||||||||||| |||| ||| ||| |||| ||||| |||||||| ||||||||||||||||||||    
T  23415833 gaaaagcgtagaaaccatcgaaattgtgttaagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttggg 23415746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 69 - 156
Target Start/End: Complemental strand, 27557591 - 27557504
Alignment:
Q  69 gaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggttgtataataatcataggttaagtttcctatcaaatttggg 156  Q
    |||||||||||||||||    ||||||||||| | |||| ||| |||||||| ||||| |||||||| ||||| ||||||||||||||    
T  27557591 gaaaagtgtagaaaccaacgaaattgtgttaataattgaagttcaggttgtagaataaacataggttgagttttctatcaaatttggg 27557504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 29045156 - 29045104
Alignment:
Q  104 ttgatgtttaggttgtataataatcataggttaagtttcctatcaaatttggg 156  Q
    |||||||| |||||||| |||||||||||||  ||||| ||||||||||||||    
T  29045156 ttgatgttcaggttgtagaataatcataggtagagttttctatcaaatttggg 29045104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 124 - 155
Target Start/End: Original strand, 19825667 - 19825698
Alignment:
Q  124 taatcataggttaagtttcctatcaaatttgg 155  Q
    ||||||||||||||||||||||||||||||||    
T  19825667 taatcataggttaagtttcctatcaaatttgg 19825698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 108 - 154
Target Start/End: Original strand, 5833817 - 5833863
Alignment:
Q  108 tgtttaggttgtataataatcataggttaagtttcctatcaaatttg 154  Q
    |||| |||||||| |||||||||| ||||||| ||||||||||||||    
T  5833817 tgttcaggttgtagaataatcatatgttaagtgtcctatcaaatttg 5833863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 156
Target Start/End: Original strand, 15891723 - 15891781
Alignment:
Q  98 taagacttgatgtttaggttgtataataatcataggttaagtttcctatcaaatttggg 156  Q
    ||||| |||| ||| ||| |||| ||||| |||||||| ||||||||||||||||||||    
T  15891723 taagaattgaagttcaggctgtaaaataaacataggttgagtttcctatcaaatttggg 15891781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 156
Target Start/End: Original strand, 15900808 - 15900866
Alignment:
Q  98 taagacttgatgtttaggttgtataataatcataggttaagtttcctatcaaatttggg 156  Q
    ||||| |||| ||| ||| |||| ||||| |||||||| ||||||||||||||||||||    
T  15900808 taagaattgaagttcaggctgtaaaataaacataggttgagtttcctatcaaatttggg 15900866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0877 (Bit Score: 87; Significance: 1e-41; HSPs: 1)
Name: scaffold0877
Description:

Target: scaffold0877; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 25 - 154
Target Start/End: Original strand, 2106 - 2236
Alignment:
Q  25 attttgggaattgggaattaggtttttcattgttgagtc-gattagaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggttgtataa 123  Q
    |||||||||||||||||||||||||| |||| ||||||  |||||||||||||||||||||||| ||||||||||||||  ||||||| |||||||| ||    
T  2106 attttgggaattgggaattaggttttccattattgagtttgattagaaaagtgtagaaaccatggtaattgtgttaagaactgatgttcaggttgtagaa 2205  T
Q  124 taatcataggttaagtttcctatcaaatttg 154  Q
    |||||||||||||||||||||| ||||||||    
T  2206 taatcataggttaagtttcctaacaaatttg 2236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 87; Significance: 1e-41; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 25 - 154
Target Start/End: Original strand, 1129 - 1259
Alignment:
Q  25 attttgggaattgggaattaggtttttcattgttgagtc-gattagaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggttgtataa 123  Q
    |||||||||||||||||||||||||| ||||||||| |  |||||||||||||||||||||||| |||||||||||| | |||||||| |||||||| ||    
T  1129 attttgggaattgggaattaggttttccattgttgaatttgattagaaaagtgtagaaaccatggtaattgtgttaaaaattgatgttcaggttgtagaa 1228  T
Q  124 taatcataggttaagtttcctatcaaatttg 154  Q
    |||||||||||||||||||||| ||||||||    
T  1229 taatcataggttaagtttcctaacaaatttg 1259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 84; Significance: 7e-40; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 18 - 156
Target Start/End: Complemental strand, 163314 - 163175
Alignment:
Q  18 gttcttgattttgggaattgggaattaggtttttcattgttgagtc-gattagaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggt 116  Q
    ||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||||||||||||| |||||||||||||| |||||||| ||||    
T  163314 gttcttgattttgggaattgggaattaggttttccattgttgagtttgattagaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcaggt 163215  T
Q  117 tgtataataatcataggttaagtttcctatcaaatttggg 156  Q
    |||| |||||  |||||| | ||| | |||||||||||||    
T  163214 tgtagaataacaataggtgatgttccttatcaaatttggg 163175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0394 (Bit Score: 83; Significance: 3e-39; HSPs: 1)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 27 - 156
Target Start/End: Complemental strand, 13021 - 12891
Alignment:
Q  27 tttgggaattgggaattaggtttttcattgttgagtc-gattagaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggttgtataata 125  Q
    |||| ||||||||||||||||||| |||||||||||  |||||||||||||||||||||||| |||||||||||||| |||||||| | |||||| ||||    
T  13021 tttgagaattgggaattaggttttccattgttgagtttgattagaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcatgttgtagaata 12922  T
Q  126 atcataggttaagtttcctatcaaatttggg 156  Q
    |||||||||||||||| ||| ||||||||||    
T  12921 atcataggttaagttttctaacaaatttggg 12891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 83; Significance: 3e-39; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 25 - 154
Target Start/End: Original strand, 23202 - 23332
Alignment:
Q  25 attttgggaattgggaattaggtttttcattgttgagtc-gattagaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggttgtataa 123  Q
    |||||||||||||||||||||||||| |||||||||||  |||||||||| ||||||||||||| |||||||||||||| |||||||| | |||||| ||    
T  23202 attttgggaattgggaattaggttttccattgttgagtttgattagaaaaatgtagaaaccatggtaattgtgttaagaattgatgttcatgttgtagaa 23301  T
Q  124 taatcataggttaagtttcctatcaaatttg 154  Q
    |||||||||||||||||||||| | ||||||    
T  23302 taatcataggttaagtttcctaacgaatttg 23332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 83; Significance: 3e-39; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 35 - 156
Target Start/End: Complemental strand, 72400 - 72278
Alignment:
Q  35 ttgggaattaggtttttcattgttgagtc-gattagaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggttgtataataatcatagg 133  Q
    |||||||||||||||| |||||||||||  |||||||||||||||||||||||| |||||||||||||| |||||||| |||||||| ||||||||||||    
T  72400 ttgggaattaggttttccattgttgagtttgattagaaaagtgtagaaaccatgataattgtgttaagaattgatgttcaggttgtagaataatcatagg 72301  T
Q  134 ttaagtttcctatcaaatttggg 156  Q
    |||||||| ||| ||||||||||    
T  72300 ttaagttttctaacaaatttggg 72278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1439 (Bit Score: 79; Significance: 7e-37; HSPs: 1)
Name: scaffold1439
Description:

Target: scaffold1439; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 27 - 156
Target Start/End: Complemental strand, 1047 - 917
Alignment:
Q  27 tttgggaattgggaattaggtttttcattgttgagtc-gattagaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggttgtataata 125  Q
    |||| |||||||||||||||||||  ||||||||||  ||||||||||||||||||| |||| |||||||||||||| |||||||| |||||||| ||||    
T  1047 tttgagaattgggaattaggttttcaattgttgagtttgattagaaaagtgtagaaatcatgataattgtgttaagaattgatgttcaggttgtagaata 948  T
Q  126 atcataggttaagtttcctatcaaatttggg 156  Q
    |||||||||||||||| ||| ||||||||||    
T  947 atcataggttaagttttctaacaaatttggg 917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 76; Significance: 4e-35; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 27 - 141
Target Start/End: Complemental strand, 42268 - 42153
Alignment:
Q  27 tttgggaattgggaattaggtttttcattgttgagtc-gattagaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggttgtataata 125  Q
    |||| ||||||||||||||||||| |||||||||||  |||||||||||||||||||||||| |||||||||||||| |||||||| | |||||| ||||    
T  42268 tttgagaattgggaattaggttttccattgttgagtttgattagaaaagtgtagaaaccatggtaattgtgttaagaattgatgttcatgttgtagaata 42169  T
Q  126 atcataggttaagttt 141  Q
    ||||||||||||||||    
T  42168 atcataggttaagttt 42153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 69 - 200
Target Start/End: Original strand, 39936 - 40075
Alignment:
Q  69 gaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggttgtataataatcataggttaagtttcctatcaa-------atttgggtagat 161  Q
    ||||||||||||||||||   ||||||||||||| |||||||| |||||||| ||||||||||||||||||||||||||||       ||||||||||||    
T  39936 gaaaagtgtagaaaccatcgaaattgtgttaagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaaattgggatttgggtagat 40035  T
Q  162 aaaattt-agttttttgggtgaaaaatgtgcagaaatcgt 200  Q
     ||||||  |||||||||||||||||||||||||| ||||    
T  40036 gaaatttgggttttttgggtgaaaaatgtgcagaagtcgt 40075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 66; Significance: 4e-29; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 113 - 309
Target Start/End: Original strand, 35655 - 35851
Alignment:
Q  113 aggttgtataataatcataggttaagtttcctatcaaatttgg-------gtagataaaatttagttttttgggtgaaaaa-tgtgcagaaatcgtaaca 204  Q
    |||||||| |||||||||||||| |||||||||||||||||||       |||||||||||||        |||||||||| |||| |||||||||||||    
T  35655 aggttgtagaataatcataggtttagtttcctatcaaatttggaatttgggtagataaaattt--------gggtgaaaaaatgtgtagaaatcgtaaca 35746  T
Q  205 gcagggaaaaactcgctaggagttcgctgttggcgaaacactctataacaattttgctattagctaacttttcgccattagcgaaattgctcagtgacat 304  Q
    |||||  |||||||||||| ||||| || |||||||||  |||| ||||||||| ||||||||  |  ||||||||||||||||||||||  |||||||     
T  35747 gcaggagaaaactcgctagaagttctctattggcgaaatcctctgtaacaatttcgctattagtcagattttcgccattagcgaaattgcatagtgacaa 35846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 27 - 156
Target Start/End: Complemental strand, 82969 - 82839
Alignment:
Q  27 tttgggaattgggaattaggtttttcattgttgagtc-gattagaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggttgtataata 125  Q
    |||| ||||| |||||||||||||  ||||||||||  |||||||||  ||||||||||||| |||||||||||||| |||||||| | |||||| ||||    
T  82969 tttgagaattcggaattaggttttcaattgttgagtttgattagaaatatgtagaaaccatgataattgtgttaagaattgatgttcaagttgtagaata 82870  T
Q  126 atcataggttaagtttcctatcaaatttggg 156  Q
    |||||| ||||||||| ||| ||||||||||    
T  82869 atcatacgttaagttttctaacaaatttggg 82839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1276 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold1276
Description:

Target: scaffold1276; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 69 - 156
Target Start/End: Complemental strand, 1068 - 981
Alignment:
Q  69 gaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggttgtataataatcataggttaagtttcctatcaaatttggg 156  Q
    ||||||||||||||||||   ||||||||||||| |||||||| ||||||||  ||||||||||||||||||||||||||||||||||    
T  1068 gaaaagtgtagaaaccatagaaattgtgttaagagttgatgttcaggttgtaggataatcataggttaagtttcctatcaaatttggg 981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 69 - 156
Target Start/End: Complemental strand, 169368 - 169281
Alignment:
Q  69 gaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggttgtataataatcataggttaagtttcctatcaaatttggg 156  Q
    ||||||||||||||||||   ||||||||||||| |||| ||| |||||||| |||||||||||||||||||||||||||||||||||    
T  169368 gaaaagtgtagaaaccatcgaaattgtgttaagaattgaagttcaggttgtagaataatcataggttaagtttcctatcaaatttggg 169281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 69 - 156
Target Start/End: Complemental strand, 176721 - 176634
Alignment:
Q  69 gaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggttgtataataatcataggttaagtttcctatcaaatttggg 156  Q
    ||||||||||||||||||   ||||||||||||| |||| ||| |||||||| |||||||||||||||||||||||||||||||||||    
T  176721 gaaaagtgtagaaaccatcgaaattgtgttaagaattgaagttcaggttgtagaataatcataggttaagtttcctatcaaatttggg 176634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 108 - 248
Target Start/End: Complemental strand, 21428 - 21279
Alignment:
Q  108 tgtttaggttgtataataatcataggttaagtttcctatcaaatttggg-------tagataaaatttagtttttt-gggtgaaaaatgtgcagaaatcg 199  Q
    |||| |||||||| ||||||||||| |||||||| ||||||||||||||       || || |||||| ||||||| |||||||||||||||||||||||    
T  21428 tgttcaggttgtagaataatcatagtttaagttttctatcaaatttgggatttgggtatatgaaatttggtttttttgggtgaaaaatgtgcagaaatcg 21329  T
Q  200 taacagca-gggaaaaactcgctaggagttcgctgttggcgaaacactct 248  Q
    |||||  | |||||||||||||||| |||||||| ||||| |||| ||||    
T  21328 taacaataggggaaaaactcgctagaagttcgctattggcaaaaccctct 21279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0453 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 69 - 156
Target Start/End: Original strand, 7134 - 7221
Alignment:
Q  69 gaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggttgtataataatcataggttaagtttcctatcaaatttggg 156  Q
    ||||||||||||||||||   ||||||||||||| | |||||| ||| |||| ||||| |||||||| ||||||||||||||||||||    
T  7134 gaaaagtgtagaaaccatcgaaattgtgttaagaatcgatgttcaggctgtagaataaacataggttgagtttcctatcaaatttggg 7221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0422 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0422
Description:

Target: scaffold0422; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 69 - 156
Target Start/End: Complemental strand, 3892 - 3805
Alignment:
Q  69 gaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggttgtataataatcataggttaagtttcctatcaaatttggg 156  Q
    ||||||||||||||||||   ||||||||||||| | |||||| |||||||  ||||| |||||||| ||||||||||||||||||||    
T  3892 gaaaagtgtagaaaccatcgaaattgtgttaagaatcgatgttcaggttgttgaataaacataggttgagtttcctatcaaatttggg 3805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 69 - 156
Target Start/End: Complemental strand, 18522 - 18435
Alignment:
Q  69 gaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggttgtataataatcataggttaagtttcctatcaaatttggg 156  Q
    ||||||||||||||||||   ||||||||||||| |||| ||| ||| |||| ||||| |||||||| ||||||||||||||||||||    
T  18522 gaaaagtgtagaaaccatcgaaattgtgttaagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttggg 18435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 69 - 156
Target Start/End: Original strand, 19423 - 19510
Alignment:
Q  69 gaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggttgtataataatcataggttaagtttcctatcaaatttggg 156  Q
    ||||||||||||||||||   ||||||||||||| |||| ||| ||| |||| ||||| |||| ||| ||||||||||||||||||||    
T  19423 gaaaagtgtagaaaccatcgaaattgtgttaagaattgaagttcaggctgtagaataaacataagttgagtttcctatcaaatttggg 19510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 69 - 156
Target Start/End: Complemental strand, 32071 - 31985
Alignment:
Q  69 gaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggttgtataataatcataggttaagtttcctatcaaatttggg 156  Q
    ||||||||||||||||||   ||||||||||||| |||| ||| ||| |||| ||||| |||||||| ||||||||||||||||||||    
T  32071 gaaaagtgtagaaaccatcgaaattgtgttaagagttgaagttcaggctgtagaataa-cataggttgagtttcctatcaaatttggg 31985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 98 - 156
Target Start/End: Complemental strand, 12139 - 12081
Alignment:
Q  98 taagacttgatgtttaggttgtataataatcataggttaagtttcctatcaaatttggg 156  Q
    ||||| |||||||| |||||||| ||||||||||||| | |||||||||||||||||||    
T  12139 taagaattgatgttcaggttgtagaataatcataggtgatgtttcctatcaaatttggg 12081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 69 - 155
Target Start/End: Complemental strand, 42600 - 42514
Alignment:
Q  69 gaaaagtgtagaaaccatgctaattgtgttaagacttgatgtttaggttgtataataatcataggttaagtttcctatcaaatttgg 155  Q
    ||||||||||||||||||   ||| ||||||||| |||| ||| ||| |||| ||||| | |||||| |||||||||||||||||||    
T  42600 gaaaagtgtagaaaccattgaaatagtgttaagaattgaagttcaggctgtagaataaacctaggttgagtttcctatcaaatttgg 42514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 25 - 99
Target Start/End: Original strand, 26062 - 26136
Alignment:
Q  25 attttgggaattgggaattaggtttttcattgttga-gtcgattagaaaagtgtagaaaccatgctaattgtgtta 99  Q
    |||||||||||||||||||||| ||| |||||||||  | |||||||||| |||||||||||||  ||||||||||    
T  26062 attttgggaattgggaattagg-tttacattgttgattttgattagaaaaatgtagaaaccatggcaattgtgtta 26136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 98 - 156
Target Start/End: Original strand, 14740 - 14798
Alignment:
Q  98 taagacttgatgtttaggttgtataataatcataggttaagtttcctatcaaatttggg 156  Q
    ||||| |||| ||| |||||||| ||||| |||||||| ||||||||||||||||||||    
T  14740 taagaattgaagttcaggttgtagaataaacataggttgagtttcctatcaaatttggg 14798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 98 - 156
Target Start/End: Original strand, 23798 - 23856
Alignment:
Q  98 taagacttgatgtttaggttgtataataatcataggttaagtttcctatcaaatttggg 156  Q
    ||||| |||| ||| |||||||| ||||| |||||||| ||||||||||||||||||||    
T  23798 taagaattgaagttcaggttgtagaataaacataggttgagtttcctatcaaatttggg 23856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 98 - 156
Target Start/End: Original strand, 21931 - 21989
Alignment:
Q  98 taagacttgatgtttaggttgtataataatcataggttaagtttcctatcaaatttggg 156  Q
    ||||| |||||||| ||| |||| ||||| |||||||| ||||||||||||||||||||    
T  21931 taagaattgatgttcaggctgtagaataaacataggttgagtttcctatcaaatttggg 21989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 124 - 156
Target Start/End: Complemental strand, 13820 - 13788
Alignment:
Q  124 taatcataggttaagtttcctatcaaatttggg 156  Q
    |||||||||||||||||||||||||||||||||    
T  13820 taatcataggttaagtttcctatcaaatttggg 13788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 113 - 153
Target Start/End: Complemental strand, 18998 - 18958
Alignment:
Q  113 aggttgtataataatcataggttaagtttcctatcaaattt 153  Q
    |||||||| |||||||||| |||||||||||||||||||||    
T  18998 aggttgtagaataatcatatgttaagtttcctatcaaattt 18958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 43947 - 43999
Alignment:
Q  104 ttgatgtttaggttgtataataatcataggttaagtttcctatcaaatttggg 156  Q
    ||||||||||||||||| ||||| |||||||| ||||||||||  ||||||||    
T  43947 ttgatgtttaggttgtagaataaacataggttgagtttcctattgaatttggg 43999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 156
Target Start/End: Complemental strand, 2688 - 2654
Alignment:
Q  122 aataatcataggttaagtttcctatcaaatttggg 156  Q
    |||||||||| ||||||||||||||||||||||||    
T  2688 aataatcatacgttaagtttcctatcaaatttggg 2654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 156
Target Start/End: Complemental strand, 20995 - 20937
Alignment:
Q  98 taagacttgatgtttaggttgtataataatcataggttaagtttcctatcaaatttggg 156  Q
    ||||| |||| ||| ||| |||| ||||| |||||||| ||||||||||||||||||||    
T  20995 taagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttggg 20937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 156
Target Start/End: Original strand, 29370 - 29428
Alignment:
Q  98 taagacttgatgtttaggttgtataataatcataggttaagtttcctatcaaatttggg 156  Q
    ||||| |||| ||| ||| |||| ||||| |||||||| ||||||||||||||||||||    
T  29370 taagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttggg 29428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462 (Bit Score: 29; Significance: 0.0000005; HSPs: 2)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 113 - 153
Target Start/End: Complemental strand, 1153 - 1113
Alignment:
Q  113 aggttgtataataatcataggttaagtttcctatcaaattt 153  Q
    |||||||| ||||||||||  ||||||||||||||||||||    
T  1153 aggttgtagaataatcatatattaagtttcctatcaaattt 1113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 113 - 153
Target Start/End: Complemental strand, 6659 - 6619
Alignment:
Q  113 aggttgtataataatcataggttaagtttcctatcaaattt 153  Q
    |||||||| ||||||||||  ||||||||||||||||||||    
T  6659 aggttgtagaataatcatatattaagtttcctatcaaattt 6619  T

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Target: scaffold0436 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0436
Description:

Target: scaffold0436; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 154
Target Start/End: Complemental strand, 8858 - 8802
Alignment:
Q  98 taagacttgatgtttaggttgtataataatcataggttaagtttcctatcaaatttg 154  Q
    ||||| |||| ||| ||| |||| ||||| |||||||| ||||||||||||||||||    
T  8858 taagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttg 8802  T

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Target: scaffold0328 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 126 - 154
Target Start/End: Original strand, 18824 - 18852
Alignment:
Q  126 atcataggttaagtttcctatcaaatttg 154  Q
    |||||||||||||||||||||||||||||    
T  18824 atcataggttaagtttcctatcaaatttg 18852  T

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