View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3424_low_13 (Length: 317)
Name: NF3424_low_13
Description: NF3424
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3424_low_13 |
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Alignment Details
Target: chr7 (Bit Score: 191; Significance: 1e-104; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 84 - 306
Target Start/End: Original strand, 8574577 - 8574799
Alignment:
| Q |
84 |
aacggatgatctattttggtgggtcttctctttctcttggttacgatatttgttgttctggattttatatgtgtaagttgatttgttaattgatattaat |
183 |
Q |
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| T |
8574577 |
aacggttgatctattttggcgggtcttctctttctcttggttacgatatttgttgttctggattttatgtgtgtaagttgatttgttaattgatattaac |
8574676 |
T |
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| Q |
184 |
atacaagagctaaagtttaactcctatcatcattcattacattttggacaactatagctattacactttaaattccactttagattttggataagataca |
283 |
Q |
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| T |
8574677 |
agacaagagctaaagtttaactcctatcatcatacattacattttggacaactatagctactacactttaaattccactttacattttggataagataca |
8574776 |
T |
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| Q |
284 |
tttccatctcacctatctccttt |
306 |
Q |
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| T |
8574777 |
tttccatctcacctatctccttt |
8574799 |
T |
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