View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3424_low_16 (Length: 279)
Name: NF3424_low_16
Description: NF3424
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3424_low_16 |
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Alignment Details
Target: chr1 (Bit Score: 255; Significance: 1e-142; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 1 - 271
Target Start/End: Original strand, 25576270 - 25576540
Alignment:
| Q |
1 |
taataagaatttaaccaaaccagttattgcagagaaattgtctcccagaagggtaaaatgggaagtgggctttcagcatcctagaacactgatggcggat |
100 |
Q |
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|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25576270 |
taatgagaatttaaccaaaccagttattgcagagaaattgtctcccagaagggtaaaatgggaagtgggctttcagcatcctagaacactgatggcggat |
25576369 |
T |
|
| Q |
101 |
gatattccaactgaagttcagaagccaactctggaaactcatattactccccgttctggctgttcaaccatcatatctatagaggaaatgtgcatggttc |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
25576370 |
gatattccaactgaagttcagaagccaactctggaaactcatattactccccgttctggctgttcaaccatcatatctacagaggaaatgtgcatggttc |
25576469 |
T |
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| Q |
201 |
tgagtaaaagtggccttgaacttccggaaggacatgaaataaaattaacaacagatgacttcttctgtgct |
271 |
Q |
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||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
25576470 |
tgaataaaagtggccttgaacttccggaaggacatgaaataaaattaacaacagatgacttcttcggtgct |
25576540 |
T |
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