View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3425_high_86 (Length: 209)
Name: NF3425_high_86
Description: NF3425
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3425_high_86 |
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Alignment Details
Target: chr1 (Bit Score: 170; Significance: 2e-91; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 11 - 192
Target Start/End: Complemental strand, 3830594 - 3830413
Alignment:
| Q |
11 |
ccaagaatatatatgactaacttacatcttcaatggaaaatggagaagccgcaatgcatatatgtgtgtgtacaattccaatgtaacatgtaaacctaat |
110 |
Q |
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| T |
3830594 |
ccaaaaatatatatgactaacttacatcttcaatggaaaatggagaagccgcaatgcatatatgtgtgtgtacaaatccaatgtaacatgtaaacctaat |
3830495 |
T |
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| Q |
111 |
tatggcgggaggctacaaatatggcacactgatgaaaatatgggtgaaacaacaatgcttgtcacacataaaactaatcccc |
192 |
Q |
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| T |
3830494 |
tatggcgggaggctacaaatatggcacactgatgaaaatatgggtgaaacaacaatgcttgttacacataaaactaatcccc |
3830413 |
T |
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