View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3425_low_34 (Length: 319)
Name: NF3425_low_34
Description: NF3425
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3425_low_34 |
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Alignment Details
Target: chr4 (Bit Score: 253; Significance: 1e-141; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 253; E-Value: 1e-141
Query Start/End: Original strand, 19 - 306
Target Start/End: Original strand, 41284004 - 41284294
Alignment:
| Q |
19 |
aagggggaaccaaaatgcgtagttaaaaacaagtgaagtagaaatgctccttgtatgagatgcatgtaataactacctctgtagcaccga---ttatgaa |
115 |
Q |
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| T |
41284004 |
aagggggaaccaaaatgcatagttaaaaacaagtgaagtagaaatgctccttgtatgagatgcatgtaataactacctctgtagcaccgacacttatgaa |
41284103 |
T |
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| Q |
116 |
aaatgattatttcaaatttttaccatgactggtgtcatgttcggctgtgtcagtgcttcataggtaactacaggaaactaaagcaattctcaagtggtcc |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41284104 |
aaatgattatttcaaatttttaccatgactggtgtcatgttcggctgtgtcagtgcttcataggtaactacaggaaactaaagcaattctcaagtggtcc |
41284203 |
T |
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| Q |
216 |
aacttctgctataagtaaccgtgtctaattttgtgagtactcactcagttgtgactatctaatgatttcaaaataattgtttctgttccat |
306 |
Q |
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|| |||||||||||||||||||| |||||||||||||||||||||||||||| || ||||||||||||||||||||||| ||||||||||| |
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| T |
41284204 |
aatttctgctataagtaaccgtgcctaattttgtgagtactcactcagttgtcaccatctaatgatttcaaaataattgcttctgttccat |
41284294 |
T |
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