View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3425_low_45 (Length: 283)

Name: NF3425_low_45
Description: NF3425
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3425_low_45
NF3425_low_45
[»] chr3 (38 HSPs)
chr3 (3-110)||(36190447-36190554)
chr3 (92-202)||(49507897-49508007)
chr3 (94-227)||(29522253-29522386)
chr3 (93-220)||(24570804-24570931)
chr3 (93-227)||(14740476-14740610)
chr3 (121-227)||(28971047-28971153)
chr3 (183-245)||(41933778-41933840)
chr3 (94-216)||(51884763-51884885)
chr3 (178-245)||(36638597-36638664)
chr3 (136-227)||(51744668-51744759)
chr3 (94-227)||(48912743-48912877)
chr3 (93-227)||(49318826-49318960)
chr3 (93-226)||(35603282-35603415)
chr3 (146-218)||(36190570-36190642)
chr3 (136-227)||(55424243-55424335)
chr3 (184-227)||(1843074-1843117)
chr3 (94-227)||(44310789-44310915)
chr3 (93-227)||(3995562-3995696)
chr3 (181-227)||(39094790-39094836)
chr3 (94-227)||(1459732-1459865)
chr3 (184-229)||(10804068-10804113)
chr3 (184-225)||(27182245-27182286)
chr3 (178-227)||(32774000-32774049)
chr3 (167-227)||(43088497-43088558)
chr3 (136-227)||(12769149-12769241)
chr3 (183-243)||(26898723-26898783)
chr3 (136-254)||(41878953-41879070)
chr3 (136-227)||(54312854-54312946)
chr3 (184-227)||(7400231-7400274)
chr3 (184-227)||(7909696-7909739)
chr3 (184-227)||(33912191-33912234)
chr3 (136-227)||(41208868-41208959)
chr3 (184-227)||(50155081-50155124)
chr3 (93-227)||(3974181-3974315)
chr3 (178-220)||(53469290-53469332)
chr3 (182-227)||(10268355-10268400)
chr3 (143-211)||(1556607-1556675)
chr3 (151-227)||(39621006-39621082)
[»] chr8 (25 HSPs)
chr8 (94-245)||(32018832-32018983)
chr8 (178-245)||(29939682-29939749)
chr8 (96-227)||(30873634-30873765)
chr8 (184-254)||(37819704-37819774)
chr8 (184-245)||(26098774-26098835)
chr8 (184-245)||(41377615-41377676)
chr8 (121-229)||(40027034-40027142)
chr8 (136-241)||(38231238-38231344)
chr8 (94-219)||(38895208-38895333)
chr8 (136-227)||(22486819-22486911)
chr8 (184-227)||(40028273-40028316)
chr8 (178-220)||(958017-958059)
chr8 (178-227)||(356981-357030)
chr8 (136-227)||(7433947-7434039)
chr8 (184-220)||(31894494-31894530)
chr8 (184-227)||(5549363-5549406)
chr8 (184-227)||(6266807-6266850)
chr8 (184-227)||(14615212-14615255)
chr8 (184-227)||(18654934-18654977)
chr8 (184-227)||(24101285-24101328)
chr8 (136-226)||(25003685-25003776)
chr8 (184-227)||(41827091-41827134)
chr8 (121-225)||(5913808-5913913)
chr8 (179-223)||(20822946-20822990)
chr8 (166-202)||(29856241-29856277)
[»] chr7 (29 HSPs)
chr7 (94-227)||(13598609-13598742)
chr7 (136-245)||(8782280-8782389)
chr7 (94-227)||(18833681-18833814)
chr7 (136-227)||(33626419-33626510)
chr7 (179-229)||(555300-555350)
chr7 (192-254)||(35527913-35527975)
chr7 (122-243)||(36863730-36863851)
chr7 (184-245)||(47761244-47761305)
chr7 (92-208)||(40921239-40921355)
chr7 (184-227)||(5216230-5216273)
chr7 (184-227)||(40683050-40683093)
chr7 (136-254)||(48949075-48949194)
chr7 (178-220)||(33889729-33889771)
chr7 (178-227)||(24764728-24764777)
chr7 (178-227)||(30072555-30072604)
chr7 (136-209)||(34350177-34350249)
chr7 (151-227)||(40073807-40073884)
chr7 (136-220)||(17196071-17196155)
chr7 (183-227)||(22791334-22791378)
chr7 (185-245)||(31325870-31325930)
chr7 (121-220)||(5042621-5042720)
chr7 (184-227)||(8614289-8614332)
chr7 (184-227)||(9696563-9696606)
chr7 (184-227)||(32796250-32796293)
chr7 (184-227)||(34185824-34185867)
chr7 (184-227)||(34202202-34202245)
chr7 (184-227)||(37471056-37471099)
chr7 (178-211)||(32841246-32841279)
chr7 (183-220)||(36643850-36643887)
[»] chr4 (33 HSPs)
chr4 (93-226)||(41882604-41882737)
chr4 (93-227)||(16624009-16624143)
chr4 (136-254)||(41141129-41141247)
chr4 (94-227)||(19823063-19823196)
chr4 (94-227)||(41855917-41856050)
chr4 (178-243)||(24534236-24534301)
chr4 (136-245)||(48499835-48499944)
chr4 (121-245)||(41831471-41831595)
chr4 (136-227)||(18861132-18861223)
chr4 (129-227)||(33492589-33492687)
chr4 (178-227)||(52278339-52278388)
chr4 (136-227)||(6366857-6366949)
chr4 (184-227)||(400896-400939)
chr4 (183-254)||(40226465-40226536)
chr4 (94-220)||(32556221-32556347)
chr4 (178-220)||(49481242-49481284)
chr4 (178-227)||(26489669-26489718)
chr4 (184-229)||(35667140-35667185)
chr4 (121-218)||(42248493-42248589)
chr4 (121-254)||(44946833-44946965)
chr4 (136-220)||(54552949-54553032)
chr4 (184-227)||(1138535-1138578)
chr4 (184-227)||(13562940-13562983)
chr4 (184-227)||(15195015-15195058)
chr4 (184-227)||(21808294-21808337)
chr4 (184-227)||(35393283-35393326)
chr4 (184-227)||(40730749-40730792)
chr4 (184-227)||(48153242-48153285)
chr4 (184-227)||(54093528-54093571)
chr4 (184-227)||(56263945-56263988)
chr4 (136-218)||(19474149-19474231)
chr4 (186-227)||(34436429-34436470)
chr4 (180-220)||(42586928-42586968)
[»] chr1 (29 HSPs)
chr1 (94-227)||(33814377-33814509)
chr1 (94-227)||(33873847-33873979)
chr1 (94-227)||(44922733-44922866)
chr1 (94-227)||(50511431-50511565)
chr1 (94-211)||(40411981-40412098)
chr1 (94-229)||(21720350-21720486)
chr1 (136-254)||(25422782-25422900)
chr1 (121-219)||(27415530-27415628)
chr1 (137-227)||(45793558-45793649)
chr1 (94-220)||(700479-700604)
chr1 (136-210)||(6714051-6714125)
chr1 (94-227)||(12254644-12254777)
chr1 (177-226)||(47039934-47039983)
chr1 (136-229)||(50863339-50863432)
chr1 (136-220)||(1068342-1068426)
chr1 (184-227)||(44372423-44372466)
chr1 (178-227)||(48605285-48605334)
chr1 (178-227)||(52928974-52929023)
chr1 (184-227)||(342678-342721)
chr1 (184-227)||(5115440-5115483)
chr1 (184-227)||(19422499-19422542)
chr1 (137-227)||(20724016-20724107)
chr1 (180-227)||(23973719-23973766)
chr1 (184-227)||(41310068-41310111)
chr1 (184-227)||(48812081-48812124)
chr1 (184-229)||(28199745-28199790)
chr1 (136-220)||(39994951-39995036)
chr1 (183-219)||(30723810-30723846)
chr1 (183-227)||(35985009-35985053)
[»] chr5 (23 HSPs)
chr5 (94-245)||(21151193-21151344)
chr5 (94-245)||(7344200-7344351)
chr5 (94-227)||(14505342-14505476)
chr5 (94-227)||(17016982-17017115)
chr5 (121-227)||(24317070-24317176)
chr5 (183-254)||(8322198-8322269)
chr5 (94-245)||(21158334-21158485)
chr5 (136-241)||(18922669-18922775)
chr5 (94-220)||(19646397-19646523)
chr5 (178-227)||(4725721-4725770)
chr5 (94-202)||(16749484-16749592)
chr5 (94-245)||(5360632-5360783)
chr5 (184-227)||(1840112-1840155)
chr5 (184-227)||(2465846-2465889)
chr5 (184-227)||(6286639-6286682)
chr5 (184-227)||(8506188-8506231)
chr5 (184-227)||(20123240-20123283)
chr5 (184-227)||(27344795-27344838)
chr5 (166-220)||(28758905-28758960)
chr5 (184-227)||(39049463-39049506)
chr5 (184-227)||(39089462-39089505)
chr5 (183-227)||(7073534-7073578)
chr5 (136-215)||(17320938-17321018)
[»] chr2 (27 HSPs)
chr2 (94-216)||(30556159-30556282)
chr2 (132-227)||(41644826-41644921)
chr2 (94-227)||(10710333-10710465)
chr2 (184-254)||(42800846-42800916)
chr2 (184-245)||(35439085-35439146)
chr2 (136-227)||(13312061-13312153)
chr2 (184-245)||(1345824-1345885)
chr2 (94-227)||(2558152-2558285)
chr2 (121-226)||(26983936-26984041)
chr2 (136-225)||(34314274-34314363)
chr2 (179-227)||(12847389-12847437)
chr2 (137-227)||(10821741-10821832)
chr2 (124-227)||(18257487-18257590)
chr2 (178-245)||(23334550-23334617)
chr2 (184-227)||(31743414-31743457)
chr2 (178-227)||(25868455-25868504)
chr2 (178-227)||(36240290-36240339)
chr2 (136-227)||(31617555-31617647)
chr2 (184-227)||(10261788-10261831)
chr2 (184-227)||(13248242-13248285)
chr2 (184-227)||(27496417-27496460)
chr2 (184-227)||(30015763-30015806)
chr2 (178-227)||(1002029-1002078)
chr2 (124-201)||(12016972-12017049)
chr2 (94-227)||(28223447-28223580)
chr2 (183-227)||(9438809-9438853)
chr2 (183-227)||(27553950-27553994)
[»] chr6 (15 HSPs)
chr6 (97-206)||(2292612-2292721)
chr6 (178-245)||(15156221-15156288)
chr6 (178-254)||(26484132-26484208)
chr6 (184-227)||(31510768-31510811)
chr6 (184-254)||(9034647-9034717)
chr6 (97-227)||(15183215-15183344)
chr6 (183-227)||(29034007-29034051)
chr6 (184-227)||(2702528-2702571)
chr6 (184-227)||(4165593-4165636)
chr6 (184-227)||(29640598-29640641)
chr6 (184-226)||(22987716-22987758)
chr6 (184-226)||(23800636-23800678)
chr6 (178-210)||(12800626-12800658)
chr6 (180-220)||(21036597-21036637)
chr6 (136-227)||(26554707-26554799)
[»] scaffold0583 (1 HSPs)
scaffold0583 (136-229)||(2744-2837)
[»] scaffold0003 (2 HSPs)
scaffold0003 (130-201)||(157092-157163)
scaffold0003 (133-211)||(156537-156615)
[»] scaffold0173 (1 HSPs)
scaffold0173 (136-245)||(26164-26274)
[»] scaffold0019 (1 HSPs)
scaffold0019 (178-227)||(74415-74464)
[»] scaffold0041 (1 HSPs)
scaffold0041 (92-208)||(51740-51856)
[»] scaffold0121 (1 HSPs)
scaffold0121 (178-220)||(11690-11732)
[»] scaffold0486 (1 HSPs)
scaffold0486 (184-227)||(99-142)
[»] scaffold0295 (2 HSPs)
scaffold0295 (130-201)||(11865-11936)
scaffold0295 (130-158)||(11285-11313)
[»] scaffold0007 (2 HSPs)
scaffold0007 (178-220)||(231222-231264)
scaffold0007 (179-227)||(56767-56815)


Alignment Details
Target: chr3 (Bit Score: 84; Significance: 6e-40; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 3 - 110
Target Start/End: Original strand, 36190447 - 36190554
Alignment:
Q  3 ataagaatggaattgtatctttactcttttatatatgtacggattttagagtaaaatgtaaatttgtatgtgtgtcaatgaaggttgactctagagctgt 102  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | |||||||||||||||||||| |||||||    
T  36190447 ataaggatggaattgtatctttactcttttatatatgtacggattttagggtaaaatgtaaatttgtatatatgtcaatgaaggttgactctggagctgt 36190546  T
Q  103 caaaatgg 110  Q
     |||||||    
T  36190547 taaaatgg 36190554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 92 - 202
Target Start/End: Complemental strand, 49508007 - 49507897
Alignment:
Q  92 tctagagctgtcaaaatgggcggcggggaccgtttaggggcggtcctaacggacttcaggctttatcagaccgagccaaaaaattaggttgaaaaacggg 191  Q
    |||||||||||||||| |||||||  || |||| ||||| ||| |||||||| |||| ||||||||| | ||| ||||||||    ||||||||||||||    
T  49508007 tctagagctgtcaaaacgggcggcccggcccgtctagggccggccctaacgggcttcgggctttatcgggccgggccaaaaagcccggttgaaaaacggg 49507908  T
Q  192 cttgaaatata 202  Q
    |||||||||||    
T  49507907 cttgaaatata 49507897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 94 - 227
Target Start/End: Original strand, 29522253 - 29522386
Alignment:
Q  94 tagagctgtcaaaatgggcggcggggaccgtttaggggcggtcctaacggacttcaggctttatcagaccgagccaaaaaattaggttgaaaaacgggct 193  Q
    ||||||||||||||||||||||  |  |||||||||| ||| ||||| || |||  ||||||||| | ||| ||||||||    ||||||||||||| ||    
T  29522253 tagagctgtcaaaatgggcggcccgacccgtttagggccggccctaaagggctttgggctttatcgggccgggccaaaaagcccggttgaaaaacggact 29522352  T
Q  194 tgaaatatattacccgagtccggccctccacggg 227  Q
    ||||||||| |||||||  |||||||| ||||||    
T  29522353 tgaaatatactacccgaacccggccctacacggg 29522386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 93 - 220
Target Start/End: Complemental strand, 24570931 - 24570804
Alignment:
Q  93 ctagagctgtcaaaatgggcggcggggaccgtttaggggcggtcctaacggacttcaggctttatcagaccgagccaaaaaattaggttgaaaaacgggc 192  Q
    ||||||||||||||| |||||||   | || ||||||| ||| |||||||| |||  ||||||||  |  || ||||||||  | |||||||||||||||    
T  24570931 ctagagctgtcaaaacgggcggccccgcccatttagggtcggccctaacgggctttgggctttattgggtcgggccaaaaagctcggttgaaaaacgggc 24570832  T
Q  193 ttgaaatatattacccgagtccggccct 220  Q
    || ||||||| |||||||||||||||||    
T  24570831 ttaaaatatactacccgagtccggccct 24570804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 93 - 227
Target Start/End: Original strand, 14740476 - 14740610
Alignment:
Q  93 ctagagctgtcaaaatgggcggcggggaccgtttaggggcggtcctaacggacttcaggctttatcagaccgagccaaaaaattaggttgaaaaacgggc 192  Q
    ||||||||||||||| |||||||  |  || ||||||| |||  ||||||| |||  ||||||| | | ||| |||||||||   |||||||||||||||    
T  14740476 ctagagctgtcaaaacgggcggcacgacccatttagggccgggtctaacgggctttgggctttagcgggccgggccaaaaaacccggttgaaaaacgggc 14740575  T
Q  193 ttgaaatatattacccgagtccggccctccacggg 227  Q
    ||||| |||| |||||||| |||||||| ||||||    
T  14740576 ttgaagtatactacccgagcccggccctacacggg 14740610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 121 - 227
Target Start/End: Complemental strand, 28971153 - 28971047
Alignment:
Q  121 ccgtttaggggcggtcctaacggacttcaggctttatcagaccgagccaaaaaattaggttgaaaaacgggcttgaaatatattacccgagtccggccct 220  Q
    |||||||||| ||| |||||||| |||| |||||| |||| | | ||||||||  | ||||||||||||| ||||||||||| ||||| || ||||||||    
T  28971153 ccgtttagggtcgggcctaacgggcttcgggctttgtcaggctgggccaaaaagctcggttgaaaaacggacttgaaatatactacccaagcccggccct 28971054  T
Q  221 ccacggg 227  Q
     ||||||    
T  28971053 acacggg 28971047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 183 - 245
Target Start/End: Complemental strand, 41933840 - 41933778
Alignment:
Q  183 aaaaacgggcttgaaatatattacccgagtccggccctccacgggtcagcccgtattaaaaat 245  Q
    |||||||||||||||||||| |||||||| |||||||| |||||| | |||||||||||||||    
T  41933840 aaaaacgggcttgaaatatactacccgagcccggccctacacgggccggcccgtattaaaaat 41933778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 94 - 216
Target Start/End: Original strand, 51884763 - 51884885
Alignment:
Q  94 tagagctgtcaaaatgggcggcggggaccgtttaggggcggtcctaacggacttcaggctttatcagaccgagccaaaaaattaggttgaaaaacgggct 193  Q
    |||||||||||||| |||||||  |  |||||||||| ||| ||||| || |||| ||||||||| | ||| ||||||||    ||||||||||||||||    
T  51884763 tagagctgtcaaaacgggcggcccgatccgtttagggccggccctaatgggcttcgggctttatctggccgggccaaaaagcccggttgaaaaacgggct 51884862  T
Q  194 tgaaatatattacccgagtccgg 216  Q
    ||||||||| |||| ||| ||||    
T  51884863 tgaaatatactacctgagcccgg 51884885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 178 - 245
Target Start/End: Complemental strand, 36638664 - 36638597
Alignment:
Q  178 ggttgaaaaacgggcttgaaatatattacccgagtccggccctccacgggtcagcccgtattaaaaat 245  Q
    ||||||||||||||||||||||||| |||||||| |||||||| |||||| |  | ||||||||||||    
T  36638664 ggttgaaaaacgggcttgaaatatactacccgagcccggccctacacgggccgactcgtattaaaaat 36638597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 136 - 227
Target Start/End: Complemental strand, 51744759 - 51744668
Alignment:
Q  136 cctaacggacttcaggctttatcagaccgagccaaaaaattaggttgaaaaacgggcttgaaatatattacccgagtccggccctccacggg 227  Q
    |||||||| |||| |||||| ||||  || |||||||| |  ||||||||||||||||||||||||| |||| |||||||| ||| ||||||    
T  51744759 cctaacgggcttcgggctttttcaggtcgggccaaaaagtccggttgaaaaacgggcttgaaatatactacctgagtccggtcctacacggg 51744668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 94 - 227
Target Start/End: Original strand, 48912743 - 48912877
Alignment:
Q  94 tagagctgtcaaaatgggcggcggggaccgtttaggggcggtcctaacggacttcaggctttatcagaccgagccaaaaaatta-ggttgaaaaacgggc 192  Q
    ||||||| |||||| |||||||  || |||||||||| ||| |||||||| |||| | ||||||| || || || ||||||    |||| |||||||| |    
T  48912743 tagagctatcaaaacgggcggcccggcccgtttagggccggccctaacgggcttcggactttatcggatcgggctaaaaaaacccggtttaaaaacggac 48912842  T
Q  193 ttgaaatatattacccgagtccggccctccacggg 227  Q
    |||||||||| |||||||| |||||||| ||||||    
T  48912843 ttgaaatatactacccgagcccggccctacacggg 48912877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 93 - 227
Target Start/End: Complemental strand, 49318960 - 49318826
Alignment:
Q  93 ctagagctgtcaaaatgggcggcggggaccgtttaggggcggtcctaacggacttcaggctttatcagaccgagccaaaaaattaggttgaaaaacgggc 192  Q
    ||||||||||||||| |||| ||   | || ||||||  |||||||||||| |||||||||||||| | |   | |||||| |  |||||||||||||||    
T  49318960 ctagagctgtcaaaacgggcagcccagcccatttaggcccggtcctaacgggcttcaggctttatcgggcttggtcaaaaagtccggttgaaaaacgggc 49318861  T
Q  193 ttgaaatatattacccgagtccggccctccacggg 227  Q
    |||||||||  |||||||| ||||| || ||||||    
T  49318860 ttgaaatatgctacccgagcccggctctacacggg 49318826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 93 - 226
Target Start/End: Original strand, 35603282 - 35603415
Alignment:
Q  93 ctagagctgtcaaaatgggcggcggggaccgtttaggggcggtcctaacggacttcaggctttatcagaccgagccaaaaaattaggttgaaaaacgggc 192  Q
    ||||||||||||||| |||||||   | |||||||||  |||| ||||||| |||| || |||||| |  |  |||||||| |  |||| |||||||||     
T  35603282 ctagagctgtcaaaacgggcggcccagcccgtttaggaccggttctaacgggcttcgggttttatcggttcaggccaaaaactctggtttaaaaacgggt 35603381  T
Q  193 ttgaaatatattacccgagtccggccctccacgg 226  Q
    |||||||||| |||||||| |||||||| |||||    
T  35603382 ttgaaatatactacccgagcccggccctacacgg 35603415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 146 - 218
Target Start/End: Original strand, 36190570 - 36190642
Alignment:
Q  146 ttcaggctttatcagaccgagccaaaaaattaggttgaaaaacgggcttgaaatatattacccgagtccggcc 218  Q
    ||||||||||||| || ||||||||||||  || ||||||||||||||| |||||||||| | ||||| ||||    
T  36190570 ttcaggctttatcggatcgagccaaaaaaccagattgaaaaacgggcttaaaatatattatctgagtctggcc 36190642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 136 - 227
Target Start/End: Complemental strand, 55424335 - 55424243
Alignment:
Q  136 cctaacggacttcaggctttatcagaccgagccaaaaaattaggttga-aaaacgggcttgaaatatattacccgagtccggccctccacggg 227  Q
    |||| |||||||| ||||||| | | ||| |||||||| |  |||||| ||||||||||||||||||| |||||||| |||||||| ||||||    
T  55424335 cctagcggacttcgggctttagcgggccgggccaaaaagtccggttgacaaaacgggcttgaaatatactacccgagcccggccctacacggg 55424243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 184 - 227
Target Start/End: Complemental strand, 1843117 - 1843074
Alignment:
Q  184 aaaacgggcttgaaatatattacccgagtccggccctccacggg 227  Q
    ||||||||||||||||||| ||||||||||||||||| ||||||    
T  1843117 aaaacgggcttgaaatatactacccgagtccggccctacacggg 1843074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 94 - 227
Target Start/End: Complemental strand, 44310915 - 44310789
Alignment:
Q  94 tagagctgtcaaaatgggcggcggggaccgtttaggggcggtcctaacggacttcaggctttatcagaccgagccaaaaaattaggttgaaaaacgggct 193  Q
    ||||||||||||||||| ||||| |   ||||||||| ||| ||||||||       |||||||||| ||| ||||||||    | ||||||||||||||    
T  44310915 tagagctgtcaaaatggacggcgcgacacgtttagggccggccctaacgg-------gctttatcagcccgggccaaaaagcccgattgaaaaacgggct 44310823  T
Q  194 tgaaatatattacccgagtccggccctccacggg 227  Q
    | ||||||| |||||||| |||||||| ||||||    
T  44310822 taaaatatactacccgagcccggccctacacggg 44310789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 93 - 227
Target Start/End: Complemental strand, 3995696 - 3995562
Alignment:
Q  93 ctagagctgtcaaaatgggcggcggggaccgtttaggggcggtcctaacggacttcaggctttatcagaccgagccaaaaaattaggttgaaaaacgggc 192  Q
    |||||||| |||||| || ||||  || || ||||||  ||| |||||||| |||| |||| |||| | ||| |||||||| |  ||| |||||||||||    
T  3995696 ctagagctatcaaaacggacggcccggcccatttaggaccggccctaacgggcttcgggctgtatctggccgggccaaaaagtccggtcgaaaaacgggc 3995597  T
Q  193 ttgaaatatattacccgagtccggccctccacggg 227  Q
    |||||||||| || | ||| |||||||| ||||||    
T  3995596 ttgaaatatactaactgagcccggccctacacggg 3995562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 227
Target Start/End: Original strand, 39094790 - 39094836
Alignment:
Q  181 tgaaaaacgggcttgaaatatattacccgagtccggccctccacggg 227  Q
    |||||||||||||||||||||| |||||||| |||||||| ||||||    
T  39094790 tgaaaaacgggcttgaaatatactacccgagaccggccctacacggg 39094836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 94 - 227
Target Start/End: Original strand, 1459732 - 1459865
Alignment:
Q  94 tagagctgtcaaaatgggcggcggggaccgtttaggggcggtcctaacggacttcaggctttatcagaccgagccaaaaaattaggttgaaaaacgggct 193  Q
    ||||||||| |||| |||||||  |  |||||||||| ||| | |||||  |||| ||||||||| | ||  ||||||||  |  |||||||||||||||    
T  1459732 tagagctgttaaaacgggcggcccgacccgtttagggccggccttaacgagcttcgggctttatcgggccaggccaaaaagctcagttgaaaaacgggct 1459831  T
Q  194 tgaaatatattacccgagtccggccctccacggg 227  Q
    ||||||||  |||| ||| |||||||| ||||||    
T  1459832 tgaaatatgctacctgagcccggccctacacggg 1459865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 184 - 229
Target Start/End: Original strand, 10804068 - 10804113
Alignment:
Q  184 aaaacgggcttgaaatatattacccgagtccggccctccacgggtc 229  Q
    ||||||||||||||||||| |||||||| |||||||| ||||||||    
T  10804068 aaaacgggcttgaaatatactacccgagcccggccctacacgggtc 10804113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 184 - 225
Target Start/End: Original strand, 27182245 - 27182286
Alignment:
Q  184 aaaacgggcttgaaatatattacccgagtccggccctccacg 225  Q
    |||||||||||||||||||||||||||| |||||||| ||||    
T  27182245 aaaacgggcttgaaatatattacccgagcccggccctacacg 27182286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 178 - 227
Target Start/End: Original strand, 32774000 - 32774049
Alignment:
Q  178 ggttgaaaaacgggcttgaaatatattacccgagtccggccctccacggg 227  Q
    ||||||||||||||||||||||||| |||||||| || ||||| ||||||    
T  32774000 ggttgaaaaacgggcttgaaatatactacccgagcccagccctacacggg 32774049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 167 - 227
Target Start/End: Complemental strand, 43088558 - 43088497
Alignment:
Q  167 ccaaaaaattaggttgaaaaa-cgggcttgaaatatattacccgagtccggccctccacggg 227  Q
    ||||||| || |||||||||| ||||||||||||||| |||||||| |||||||| ||||||    
T  43088558 ccaaaaagttcggttgaaaaagcgggcttgaaatatactacccgagcccggccctacacggg 43088497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 227
Target Start/End: Complemental strand, 12769241 - 12769149
Alignment:
Q  136 cctaacggacttcaggctttatcagaccgagccaaaaaattaggttgaaaaa-cgggcttgaaatatattacccgagtccggccctccacggg 227  Q
    |||||||| |||| ||||||||| | ||| |||||||| |  |||||||||| ||||||||||||||| ||||||   |||||||| ||||||    
T  12769241 cctaacgggcttcgggctttatcgggccgggccaaaaagtccggttgaaaaaacgggcttgaaatatactacccggacccggccctacacggg 12769149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 243
Target Start/End: Complemental strand, 26898783 - 26898723
Alignment:
Q  183 aaaaacgggcttgaaatatattacccgagtccggccctccacgggtcagcccgtattaaaa 243  Q
    |||||||||||||||||||| |||||||| |||||||| |||||  | |||| ||||||||    
T  26898783 aaaaacgggcttgaaatatactacccgagcccggccctacacggaccggcccatattaaaa 26898723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 254
Target Start/End: Original strand, 41878953 - 41879070
Alignment:
Q  136 cctaacggacttcaggctttatcagaccgagccaaaaaattaggttgaaaa-acgggcttgaaatatattacccgagtccggccctccacgggtcagccc 234  Q
    |||||||| |||| ||||||||| | |||  | |||||||  ||||||||| |||||||||||||||| |||||||| |||| |    ||||| | ||||    
T  41878953 cctaacgggcttcgggctttatcgggccggccaaaaaaatccggttgaaaaaacgggcttgaaatatactacccgagcccgggc--taacgggccggccc 41879050  T
Q  235 gtattaaaaatgacattttt 254  Q
    ||||||||||| ||||||||    
T  41879051 gtattaaaaatcacattttt 41879070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 227
Target Start/End: Original strand, 54312854 - 54312946
Alignment:
Q  136 cctaacggacttcaggctttatcagaccgagccaaaaaattaggttga-aaaacgggcttgaaatatattacccgagtccggccctccacggg 227  Q
    |||||||| |||| ||||||||| | ||| ||||||||    |||||  ||||||||||||||||||| |||||||| |||||||| ||||||    
T  54312854 cctaacgggcttcgggctttatcgggccgggccaaaaagcccggttgggaaaacgggcttgaaatatactacccgagcccggccctacacggg 54312946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 184 - 227
Target Start/End: Complemental strand, 7400274 - 7400231
Alignment:
Q  184 aaaacgggcttgaaatatattacccgagtccggccctccacggg 227  Q
    ||||||||||||||||||| |||||||| |||||||| ||||||    
T  7400274 aaaacgggcttgaaatatactacccgagcccggccctacacggg 7400231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 184 - 227
Target Start/End: Original strand, 7909696 - 7909739
Alignment:
Q  184 aaaacgggcttgaaatatattacccgagtccggccctccacggg 227  Q
    ||||||||||||||||||| |||||||| |||||||| ||||||    
T  7909696 aaaacgggcttgaaatatactacccgagcccggccctacacggg 7909739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 184 - 227
Target Start/End: Complemental strand, 33912234 - 33912191
Alignment:
Q  184 aaaacgggcttgaaatatattacccgagtccggccctccacggg 227  Q
    ||||||||||||||||||| |||||||| |||||||| ||||||    
T  33912234 aaaacgggcttgaaatatactacccgagcccggccctacacggg 33912191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 136 - 227
Target Start/End: Original strand, 41208868 - 41208959
Alignment:
Q  136 cctaacggacttcaggctttatcagaccgagccaaaaaattaggttgaaaaacgggcttgaaatatattacccgagtccggccctccacggg 227  Q
    ||||||||  |||| |||||||| |  |||||||||||    |||| ||||| |||||||||||||| |||||||| |||||||| ||||||    
T  41208868 cctaacgggtttcaagctttatcgggtcgagccaaaaagcccggttaaaaaatgggcttgaaatatactacccgagcccggccctacacggg 41208959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 184 - 227
Target Start/End: Original strand, 50155081 - 50155124
Alignment:
Q  184 aaaacgggcttgaaatatattacccgagtccggccctccacggg 227  Q
    ||||||||||||||||||| |||||||| |||||||| ||||||    
T  50155081 aaaacgggcttgaaatatactacccgagcccggccctacacggg 50155124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 227
Target Start/End: Original strand, 3974181 - 3974315
Alignment:
Q  93 ctagagctgtcaaaatgggcggcggggaccgtttaggggcggtcctaacggacttcaggctttatcagaccgagccaaaaaattaggttgaaaaacgggc 192  Q
    |||||||| |||||| |||||||  || || ||||||  ||| |||||||| |||| |||| |||| | |||  |||||||    ||| |||||||||||    
T  3974181 ctagagctatcaaaacgggcggcccggcccatttaggaccggccctaacgggcttcgggctgtatctggccggaccaaaaagcccggtcgaaaaacgggc 3974280  T
Q  193 ttgaaatatattacccgagtccggccctccacggg 227  Q
    |||||||||| || | ||| |||||||| ||||||    
T  3974281 ttgaaatatactaactgagcccggccctacacggg 3974315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 220
Target Start/End: Complemental strand, 53469332 - 53469290
Alignment:
Q  178 ggttgaaaaacgggcttgaaatatattacccgagtccggccct 220  Q
    ||||||||||||||||||||||||| ||||||||  |||||||    
T  53469332 ggttgaaaaacgggcttgaaatatactacccgagctcggccct 53469290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 227
Target Start/End: Complemental strand, 10268400 - 10268355
Alignment:
Q  182 gaaaaacgggcttgaaatatattacccgagtccggccctccacggg 227  Q
    ||||||||||||||||||||| |||| ||| |||||||| ||||||    
T  10268400 gaaaaacgggcttgaaatatactacctgagcccggccctacacggg 10268355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 143 - 211
Target Start/End: Original strand, 1556607 - 1556675
Alignment:
Q  143 gacttcaggctttatcagaccgagccaaaaaattaggttgaaaaacgggcttgaaatatattacccgag 211  Q
    |||||| ||||||||| |  || ||||||||  | |||| |||||||||||||||||||| ||||||||    
T  1556607 gacttcgggctttatcgggtcgggccaaaaagctcggttaaaaaacgggcttgaaatatactacccgag 1556675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 227
Target Start/End: Complemental strand, 39621082 - 39621006
Alignment:
Q  151 gctttatcagaccgagccaaaaaattaggttgaaaaacgggcttgaaatatattacccgagtccggccctccacggg 227  Q
    |||||||||| ||| ||||||||    ||||  ||||||||||||||||||| ||||| ||||||||| | ||||||    
T  39621082 gctttatcaggccgggccaaaaagcctggttagaaaacgggcttgaaatatactacccaagtccggccatacacggg 39621006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 80; Significance: 1e-37; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 94 - 245
Target Start/End: Complemental strand, 32018983 - 32018832
Alignment:
Q  94 tagagctgtcaaaatgggcggcggggaccgtttaggggcggtcctaacggacttcaggctttatcagaccgagccaaaaaattaggttgaaaaacgggct 193  Q
    |||||||||||||| |||||||  || |||||||||| ||| |||||||| |||||||||||||| ||||| ||||||||    ||||||||||||||||    
T  32018983 tagagctgtcaaaacgggcggcccggcccgtttagggccggccctaacgggcttcaggctttatcggaccgggccaaaaagcccggttgaaaaacgggct 32018884  T
Q  194 tgaaatatattacccgagtccggccctccacgggtcagcccgtattaaaaat 245  Q
    ||||||||| ||||||||||||||||| |||||| | | |||||||||||||    
T  32018883 tgaaatatactacccgagtccggccctacacgggccggtccgtattaaaaat 32018832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 178 - 245
Target Start/End: Original strand, 29939682 - 29939749
Alignment:
Q  178 ggttgaaaaacgggcttgaaatatattacccgagtccggccctccacgggtcagcccgtattaaaaat 245  Q
    ||||||||||||||||||||||||| |||||||| |||||||| |||||| | |||||||||||||||    
T  29939682 ggttgaaaaacgggcttgaaatatactacccgagcccggccctacacgggccggcccgtattaaaaat 29939749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 96 - 227
Target Start/End: Original strand, 30873634 - 30873765
Alignment:
Q  96 gagctgtcaaaatgggcggcggggaccgtttaggggcggtcctaacggacttcaggctttatcagaccgagccaaaaaattaggttgaaaaacgggcttg 195  Q
    |||| ||||||| |||| ||  || |||||||| | ||| |||||||| |||| | ||||||||  ||| |||||||| |  ||||||||||||||||||    
T  30873634 gagcggtcaaaacgggcagctcggcccgtttagagccggccctaacgggcttcggtctttatcaagccgggccaaaaagtccggttgaaaaacgggcttg 30873733  T
Q  196 aaatatattacccgagtccggccctccacggg 227  Q
    ||||||| ||||||||| ||||||| ||||||    
T  30873734 aaatatactacccgagttcggccctacacggg 30873765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 184 - 254
Target Start/End: Complemental strand, 37819774 - 37819704
Alignment:
Q  184 aaaacgggcttgaaatatattacccgagtccggccctccacgggtcagcccgtattaaaaatgacattttt 254  Q
    ||||||||||||||||||| |||||||| |||||||| |||||| | ||||||||||||||| | ||||||    
T  37819774 aaaacgggcttgaaatatactacccgagcccggccctacacgggccggcccgtattaaaaattatattttt 37819704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 184 - 245
Target Start/End: Complemental strand, 26098835 - 26098774
Alignment:
Q  184 aaaacgggcttgaaatatattacccgagtccggccctccacgggtcagcccgtattaaaaat 245  Q
    ||||||||||||||||||| |||||||| |||||||| |||||| | |||||||||||||||    
T  26098835 aaaacgggcttgaaatatactacccgagcccggccctacacgggccggcccgtattaaaaat 26098774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 184 - 245
Target Start/End: Complemental strand, 41377676 - 41377615
Alignment:
Q  184 aaaacgggcttgaaatatattacccgagtccggccctccacgggtcagcccgtattaaaaat 245  Q
    ||||||||||||||||||| |||||||| |||||||| |||||| | |||||||||||||||    
T  41377676 aaaacgggcttgaaatatactacccgagcccggccctacacgggccggcccgtattaaaaat 41377615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 121 - 229
Target Start/End: Original strand, 40027034 - 40027142
Alignment:
Q  121 ccgtttaggggcggtcctaacggacttcaggctttatcagaccgagccaaaaaattaggttgaaaaacgggcttgaaatatattacccgagtccggccct 220  Q
    |||||||||| ||| |||||||| |||| ||||||||| | | | ||||||||    |||||||||| ||||||||||||||  ||||||||| ||||||    
T  40027034 ccgtttagggccggccctaacgggcttcgggctttatcgggcagggccaaaaagcccggttgaaaaatgggcttgaaatataccacccgagtctggccct 40027133  T
Q  221 ccacgggtc 229  Q
     ||||||||    
T  40027134 acacgggtc 40027142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 136 - 241
Target Start/End: Original strand, 38231238 - 38231344
Alignment:
Q  136 cctaacggacttcaggctttatcagaccgagccaaaaaattaggttga-aaaacgggcttgaaatatattacccgagtccggccctccacgggtcagccc 234  Q
    |||| ||| |||| ||||||| ||| ||| ||||||||    |||||| ||||||||||||||||||| |||||||| |||||||| |||||| | ||||    
T  38231238 cctagcgggcttcgggctttagcaggccgggccaaaaagcccggttgacaaaacgggcttgaaatatactacccgagcccggccctacacgggccggccc 38231337  T
Q  235 gtattaa 241  Q
    |||||||    
T  38231338 gtattaa 38231344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 94 - 219
Target Start/End: Complemental strand, 38895333 - 38895208
Alignment:
Q  94 tagagctgtcaaaatgggcggcggggaccgtttaggggcggtcctaacggacttcaggctttatcagaccgagccaaaaaattaggttgaaaaacgggct 193  Q
    |||||||||||||| |||||||  || |||||||||| ||| ||||||||  ||| ||||||||| | ||| || |||||    | | ||||||||||||    
T  38895333 tagagctgtcaaaacgggcggcccggcccgtttagggccggccctaacgggtttcgggctttatcgggccgggcgaaaaagcccgatcgaaaaacgggct 38895234  T
Q  194 tgaaatatattacccgagtccggccc 219  Q
    ||||||||  |||||||| |||||||    
T  38895233 tgaaatatgctacccgagcccggccc 38895208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 136 - 227
Target Start/End: Original strand, 22486819 - 22486911
Alignment:
Q  136 cctaacggacttcaggctttatcagaccgagccaaaaaattaggttg-aaaaacgggcttgaaatatattacccgagtccggccctccacggg 227  Q
    |||||||| |||| ||||||||| | ||| ||||||||    ||||| |||||||||||||||||||| |||||||| |||||||| ||||||    
T  22486819 cctaacgggcttcgggctttatcgggccgggccaaaaagcccggttggaaaaacgggcttgaaatatactacccgagcccggccctacacggg 22486911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 184 - 227
Target Start/End: Complemental strand, 40028316 - 40028273
Alignment:
Q  184 aaaacgggcttgaaatatattacccgagtccggccctccacggg 227  Q
    ||||||||||||||||||| ||||||||||||||||| ||||||    
T  40028316 aaaacgggcttgaaatatactacccgagtccggccctacacggg 40028273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 220
Target Start/End: Complemental strand, 958059 - 958017
Alignment:
Q  178 ggttgaaaaacgggcttgaaatatattacccgagtccggccct 220  Q
    ||||||||||||||||||||||||| ||| |||||||||||||    
T  958059 ggttgaaaaacgggcttgaaatatactactcgagtccggccct 958017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 178 - 227
Target Start/End: Complemental strand, 357030 - 356981
Alignment:
Q  178 ggttgaaaaacgggcttgaaatatattacccgagtccggccctccacggg 227  Q
    ||||||||||||||||||||||||  |||||||| |||||||| ||||||    
T  357030 ggttgaaaaacgggcttgaaatatgctacccgagcccggccctacacggg 356981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 227
Target Start/End: Complemental strand, 7434039 - 7433947
Alignment:
Q  136 cctaacggacttcaggctttatcagaccgagccaaaaaattaggttga-aaaacgggcttgaaatatattacccgagtccggccctccacggg 227  Q
    |||| |||||||| ||||||| | | ||| || ||||| |  |||||| ||||||||||||||||||| |||||||| |||||||| ||||||    
T  7434039 cctagcggacttcgggctttaacgggccgggctaaaaagtccggttgacaaaacgggcttgaaatatactacccgagcccggccctacacggg 7433947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 31894494 - 31894530
Alignment:
Q  184 aaaacgggcttgaaatatattacccgagtccggccct 220  Q
    ||||||||||||||||||| |||||||||||||||||    
T  31894494 aaaacgggcttgaaatatactacccgagtccggccct 31894530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 184 - 227
Target Start/End: Complemental strand, 5549406 - 5549363
Alignment:
Q  184 aaaacgggcttgaaatatattacccgagtccggccctccacggg 227  Q
    ||||||||||||||||||| |||||||| |||||||| ||||||    
T  5549406 aaaacgggcttgaaatatactacccgagcccggccctacacggg 5549363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 184 - 227
Target Start/End: Complemental strand, 6266850 - 6266807
Alignment:
Q  184 aaaacgggcttgaaatatattacccgagtccggccctccacggg 227  Q
    ||||||||||||||||||| |||||||| |||||||| ||||||    
T  6266850 aaaacgggcttgaaatatactacccgagcccggccctacacggg 6266807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 184 - 227
Target Start/End: Original strand, 14615212 - 14615255
Alignment:
Q  184 aaaacgggcttgaaatatattacccgagtccggccctccacggg 227  Q
    ||||||||||||||||||| |||||||| |||||||| ||||||    
T  14615212 aaaacgggcttgaaatatactacccgagcccggccctacacggg 14615255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 184 - 227
Target Start/End: Complemental strand, 18654977 - 18654934
Alignment:
Q  184 aaaacgggcttgaaatatattacccgagtccggccctccacggg 227  Q
    ||||||||||||||||||| |||||||| |||||||| ||||||    
T  18654977 aaaacgggcttgaaatatactacccgagcccggccctacacggg 18654934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 184 - 227
Target Start/End: Original strand, 24101285 - 24101328
Alignment:
Q  184 aaaacgggcttgaaatatattacccgagtccggccctccacggg 227  Q
    ||||||||||||||||||| |||||||| |||||||| ||||||    
T  24101285 aaaacgggcttgaaatatactacccgagcccggccctacacggg 24101328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 136 - 226
Target Start/End: Complemental strand, 25003776 - 25003685
Alignment:
Q  136 cctaacggacttcaggctttatcagaccgagccaaaaaattaggttga-aaaacgggcttgaaatatattacccgagtccggccctccacgg 226  Q
    |||| ||| |||| ||||||| | | ||| ||||||||  | |||||| |||| |||||||||||||| ||||||||||||||||| |||||    
T  25003776 cctagcgggcttcgggctttagcgggccgggccaaaaagctcggttgacaaaatgggcttgaaatatactacccgagtccggccctacacgg 25003685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 184 - 227
Target Start/End: Original strand, 41827091 - 41827134
Alignment:
Q  184 aaaacgggcttgaaatatattacccgagtccggccctccacggg 227  Q
    ||||||||||||||||||| |||||||| |||||||| ||||||    
T  41827091 aaaacgggcttgaaatatactacccgagcccggccctacacggg 41827134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 225
Target Start/End: Complemental strand, 5913913 - 5913808
Alignment:
Q  121 ccgtttaggggcggtcctaacggacttcaggctttatcagaccgagccaaaaaatta-ggttgaaaaacgggcttgaaatatattacccgagtccggccc 219  Q
    |||||||||| ||| |||||||| |||| | ||||||| | ||| |||||||||    |||||||||||  |||||||||||| |||| ||| |||||||    
T  5913913 ccgtttagggtcggccctaacgggcttcggactttatcggtccgggccaaaaaaacccggttgaaaaacaagcttgaaatatactacctgagcccggccc 5913814  T
Q  220 tccacg 225  Q
    | ||||    
T  5913813 tacacg 5913808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 179 - 223
Target Start/End: Original strand, 20822946 - 20822990
Alignment:
Q  179 gttgaaaaacgggcttgaaatatattacccgagtccggccctcca 223  Q
    ||||||||| ||| ||||||||||||||||||| | |||||||||    
T  20822946 gttgaaaaatgggtttgaaatatattacccgaggctggccctcca 20822990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 166 - 202
Target Start/End: Original strand, 29856241 - 29856277
Alignment:
Q  166 gccaaaaaattaggttgaaaaacgggcttgaaatata 202  Q
    ||||||||| | |||||||||||||||||||||||||    
T  29856241 gccaaaaaactcggttgaaaaacgggcttgaaatata 29856277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 58; Significance: 2e-24; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 94 - 227
Target Start/End: Complemental strand, 13598742 - 13598609
Alignment:
Q  94 tagagctgtcaaaatgggcggcggggaccgtttaggggcggtcctaacggacttcaggctttatcagaccgagccaaaaaattaggttgaaaaacgggct 193  Q
    ||||| |||||||| |||||||  ||  ||||||||| ||| |||||||| |||| ||||||||| | ||| ||||||||    ||||||||||||||||    
T  13598742 tagagttgtcaaaacgggcggcccggctcgtttagggtcggccctaacgggcttcgggctttatcgggccgggccaaaaagcccggttgaaaaacgggct 13598643  T
Q  194 tgaaatatattacccgagtccggccctccacggg 227  Q
    ||||||||| ||||||||||||||||| ||||||    
T  13598642 tgaaatatactacccgagtccggccctacacggg 13598609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 136 - 245
Target Start/End: Complemental strand, 8782389 - 8782280
Alignment:
Q  136 cctaacggacttcaggctttatcagaccgagccaaaaaattaggttgaaaaacgggcttgaaatatattacccgagtccggccctccacgggtcagcccg 235  Q
    |||||||| |||| ||||||||| | ||| ||||||||  | ||||||||||||||||||||||||| |||||||| |||||||| |||||| | | |||    
T  8782389 cctaacgggcttcgggctttatcgggccgggccaaaaagctcggttgaaaaacgggcttgaaatatactacccgagcccggccctacacgggccgggccg 8782290  T
Q  236 tattaaaaat 245  Q
    ||||||||||    
T  8782289 tattaaaaat 8782280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 94 - 227
Target Start/End: Original strand, 18833681 - 18833814
Alignment:
Q  94 tagagctgtcaaaatgggcggcggggaccgtttaggggcggtcctaacggacttcaggctttatcagaccgagccaaaaaattaggttgaaaaacgggct 193  Q
    |||||||||||||| |||||||  || |||| ||||| ||| |||||||| |||| |||||||||   ||| ||||||||    |||| |||||||||||    
T  18833681 tagagctgtcaaaacgggcggcctggcccgtgtagggccggccctaacgggcttcgggctttatcgtgccgggccaaaaagcccggtttaaaaacgggct 18833780  T
Q  194 tgaaatatattacccgagtccggccctccacggg 227  Q
    ||||||||| |||||||| |||||||| ||||||    
T  18833781 tgaaatatactacccgagcccggccctacacggg 18833814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 136 - 227
Target Start/End: Original strand, 33626419 - 33626510
Alignment:
Q  136 cctaacggacttcaggctttatcagaccgagccaaaaaattaggttgaaaaacgggcttgaaatatattacccgagtccggccctccacggg 227  Q
    |||||||| |||| ||||||||| | ||| |||||||| |  ||||||||||||||||||||||| | |||||||| | |||||| ||||||    
T  33626419 cctaacgggcttcgggctttatcgggccgggccaaaaagtccggttgaaaaacgggcttgaaataaactacccgagcctggccctacacggg 33626510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 179 - 229
Target Start/End: Original strand, 555300 - 555350
Alignment:
Q  179 gttgaaaaacgggcttgaaatatattacccgagtccggccctccacgggtc 229  Q
    |||||||||||||||||||||||| |||||||| |||||||| ||||||||    
T  555300 gttgaaaaacgggcttgaaatatactacccgagcccggccctacacgggtc 555350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 192 - 254
Target Start/End: Original strand, 35527913 - 35527975
Alignment:
Q  192 cttgaaatatattacccgagtccggccctccacgggtcagcccgtattaaaaatgacattttt 254  Q
    ||||||||||| ||||||||||||||||  |||||| | ||||||||||||||| ||||||||    
T  35527913 cttgaaatatactacccgagtccggcccaacacgggccggcccgtattaaaaattacattttt 35527975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 122 - 243
Target Start/End: Complemental strand, 36863851 - 36863730
Alignment:
Q  122 cgtttaggggcggtcctaacggacttcaggctttatcagaccgagccaaaaaattaggttgaaaaacgggcttgaaatatattacccgagtccggccctc 221  Q
    ||||||||| | | |||||||| ||||| |||||||| | ||| |  ||||| |  |||||||||| |||||||||||||| |||||||| |  |||||     
T  36863851 cgtttagggccagccctaacgggcttcatgctttatcgggccgggataaaaagtccggttgaaaaatgggcttgaaatatactacccgagcctagcccta 36863752  T
Q  222 cacgggtcagcccgtattaaaa 243  Q
    |||||| | |||||||||||||    
T  36863751 cacgggccggcccgtattaaaa 36863730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 184 - 245
Target Start/End: Original strand, 47761244 - 47761305
Alignment:
Q  184 aaaacgggcttgaaatatattacccgagtccggccctccacgggtcagcccgtattaaaaat 245  Q
    ||||| ||||||||||||| |||||||| |||||||| |||||| | |||||||||||||||    
T  47761244 aaaacaggcttgaaatatactacccgagcccggccctacacgggccggcccgtattaaaaat 47761305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 92 - 208
Target Start/End: Original strand, 40921239 - 40921355
Alignment:
Q  92 tctagagctgtcaaaatgggcggcggggaccgtttaggggcggtcctaacggacttcaggctttatcagaccgagccaaaaaattaggttgaaaaacggg 191  Q
    |||||||||||||||| |||||||  |  |||||||||| ||| |||||||| |||| ||||||||| | | | |||||||| |  |||||||||| | |    
T  40921239 tctagagctgtcaaaacgggcggcccgacccgtttagggccggccctaacgggcttcgggctttatcgggcagggccaaaaagtccggttgaaaaatgag 40921338  T
Q  192 cttgaaatatattaccc 208  Q
    ||| ||||||| |||||    
T  40921339 cttaaaatatactaccc 40921355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 184 - 227
Target Start/End: Complemental strand, 5216273 - 5216230
Alignment:
Q  184 aaaacgggcttgaaatatattacccgagtccggccctccacggg 227  Q
    |||||||||||||||||||||||||||| |||||||| ||||||    
T  5216273 aaaacgggcttgaaatatattacccgagcccggccctacacggg 5216230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 184 - 227
Target Start/End: Original strand, 40683050 - 40683093
Alignment:
Q  184 aaaacgggcttgaaatatattacccgagtccggccctccacggg 227  Q
    ||||||||||||||||||| ||||||||||||||||| ||||||    
T  40683050 aaaacgggcttgaaatatactacccgagtccggccctacacggg 40683093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 136 - 254
Target Start/End: Original strand, 48949075 - 48949194
Alignment:
Q  136 cctaacggacttcaggctttatcagaccgagccaaaaaattaggttga-aaaacgggcttgaaatatattacccgagtccggccctccacgggtcagccc 234  Q
    |||| ||| |||| ||||||| | | ||| |||||||| |  |||||| ||||||||||||||||||| |||||||  |||||||| |||||| |  |||    
T  48949075 cctagcgggcttcgggctttagcgggccgggccaaaaagtccggttgataaaacgggcttgaaatatactacccgaacccggccctacacgggccgaccc 48949174  T
Q  235 gtattaaaaatgacattttt 254  Q
    ||||||||||| | ||||||    
T  48949175 gtattaaaaattatattttt 48949194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 220
Target Start/End: Complemental strand, 33889771 - 33889729
Alignment:
Q  178 ggttgaaaaacgggcttgaaatatattacccgagtccggccct 220  Q
    ||||||||||||||||||||||||| |||||||| ||||||||    
T  33889771 ggttgaaaaacgggcttgaaatatactacccgagcccggccct 33889729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 178 - 227
Target Start/End: Complemental strand, 24764777 - 24764728
Alignment:
Q  178 ggttgaaaaacgggcttgaaatatattacccgagtccggccctccacggg 227  Q
    |||||||||| |||||||||||||| |||||||| |||||||| ||||||    
T  24764777 ggttgaaaaatgggcttgaaatatactacccgagcccggccctacacggg 24764728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 178 - 227
Target Start/End: Complemental strand, 30072604 - 30072555
Alignment:
Q  178 ggttgaaaaacgggcttgaaatatattacccgagtccggccctccacggg 227  Q
    ||||||||||||| ||||||||||| ||||||||| ||||||| ||||||    
T  30072604 ggttgaaaaacggacttgaaatatactacccgagttcggccctacacggg 30072555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 136 - 209
Target Start/End: Complemental strand, 34350249 - 34350177
Alignment:
Q  136 cctaacggacttcaggctttatcagaccgagccaaaaaattaggttgaaaaacgggcttgaaatatattacccg 209  Q
    |||||||| |||| ||||||||||||||| ||||||||    | ||||||||||||||||||||||| ||||||    
T  34350249 cctaacgggcttc-ggctttatcagaccgggccaaaaagcccgattgaaaaacgggcttgaaatatactacccg 34350177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 151 - 227
Target Start/End: Original strand, 40073807 - 40073884
Alignment:
Q  151 gctttatcagaccgagccaaaaaattaggttgaaaa-acgggcttgaaatatattacccgagtccggccctccacggg 227  Q
    |||||||| | ||| |||||||| |  ||||||||| |||||||||||||||| |||||||| |||||||| ||||||    
T  40073807 gctttatcgggccgggccaaaaagtccggttgaaaaaacgggcttgaaatatactacccgagcccggccctacacggg 40073884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 220
Target Start/End: Complemental strand, 17196155 - 17196071
Alignment:
Q  136 cctaacggacttcaggctttatcagaccgagccaaaaaattaggttgaaaaacgggcttgaaatatattacccgagtccggccct 220  Q
    |||||||| |||| ||||||||| ||||| ||||||||   || ||||||||| ||||||||||||| ||||  || ||||||||    
T  17196155 cctaacgggcttcgggctttatcggaccgggccaaaaagccagtttgaaaaacaggcttgaaatatactaccttagcccggccct 17196071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 227
Target Start/End: Original strand, 22791334 - 22791378
Alignment:
Q  183 aaaaacgggcttgaaatatattacccgagtccggccctccacggg 227  Q
    |||||||||||||||||||| |||||||||||||| || ||||||    
T  22791334 aaaaacgggcttgaaatatactacccgagtccggctctacacggg 22791378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 245
Target Start/End: Complemental strand, 31325930 - 31325870
Alignment:
Q  185 aaacgggcttgaaatatattacccgagtccggccctccacgggtcagcccgtattaaaaat 245  Q
    |||||| ||||||||||| |||||||| |||| ||| |||||| | |||||||||||||||    
T  31325930 aaacggccttgaaatatactacccgagcccggtcctacacgggccggcccgtattaaaaat 31325870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 121 - 220
Target Start/End: Original strand, 5042621 - 5042720
Alignment:
Q  121 ccgtttaggggcggtcctaacggacttcaggctttatcagaccgagccaaaaaattaggttgaaaaacgggcttgaaatatattacccgagtccggccct 220  Q
    |||||||||| ||  |||||||| | |||||||||||| ||||  ||||||||  | ||||| || ||| |||||||| ||| || ||||||||||||||    
T  5042621 ccgtttagggccgaccctaacgggcatcaggctttatcggaccaggccaaaaagcttggttggaatacgagcttgaaaaatactatccgagtccggccct 5042720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 184 - 227
Target Start/End: Complemental strand, 8614332 - 8614289
Alignment:
Q  184 aaaacgggcttgaaatatattacccgagtccggccctccacggg 227  Q
    |||||||| |||||||||| ||||||||||||||||| ||||||    
T  8614332 aaaacgggtttgaaatatactacccgagtccggccctacacggg 8614289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 184 - 227
Target Start/End: Original strand, 9696563 - 9696606
Alignment:
Q  184 aaaacgggcttgaaatatattacccgagtccggccctccacggg 227  Q
    ||||||||||||||||||| |||||||| |||||||| ||||||    
T  9696563 aaaacgggcttgaaatatactacccgagcccggccctacacggg 9696606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 184 - 227
Target Start/End: Complemental strand, 32796293 - 32796250
Alignment:
Q  184 aaaacgggcttgaaatatattacccgagtccggccctccacggg 227  Q
    ||||||||||||||||||| |||||||| |||||||| ||||||    
T  32796293 aaaacgggcttgaaatatactacccgagcccggccctacacggg 32796250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 184 - 227
Target Start/End: Original strand, 34185824 - 34185867
Alignment:
Q  184 aaaacgggcttgaaatatattacccgagtccggccctccacggg 227  Q
    ||||||||||||||||||| |||||||| |||||||| ||||||    
T  34185824 aaaacgggcttgaaatatactacccgagcccggccctacacggg 34185867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 184 - 227
Target Start/End: Original strand, 34202202 - 34202245
Alignment:
Q  184 aaaacgggcttgaaatatattacccgagtccggccctccacggg 227  Q
    ||||||||||||||||||| |||||||| |||||||| ||||||    
T  34202202 aaaacgggcttgaaatatactacccgagcccggccctacacggg 34202245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 184 - 227
Target Start/End: Original strand, 37471056 - 37471099
Alignment:
Q  184 aaaacgggcttgaaatatattacccgagtccggccctccacggg 227  Q
    ||||||||||||||||||| |||||||| |||||||| ||||||    
T  37471056 aaaacgggcttgaaatatactacccgagcccggccctacacggg 37471099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 211
Target Start/End: Complemental strand, 32841279 - 32841246
Alignment:
Q  178 ggttgaaaaacgggcttgaaatatattacccgag 211  Q
    ||||||||||||||||||||||||| ||||||||    
T  32841279 ggttgaaaaacgggcttgaaatatactacccgag 32841246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 220
Target Start/End: Complemental strand, 36643887 - 36643850
Alignment:
Q  183 aaaaacgggcttgaaatatattacccgagtccggccct 220  Q
    |||||||||||||||||||| |||||||| ||||||||    
T  36643887 aaaaacgggcttgaaatatactacccgagcccggccct 36643850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 58; Significance: 2e-24; HSPs: 33)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 93 - 226
Target Start/End: Original strand, 41882604 - 41882737
Alignment:
Q  93 ctagagctgtcaaaatgggcggcggggaccgtttaggggcggtcctaacggacttcaggctttatcagaccgagccaaaaaattaggttgaaaaacgggc 192  Q
    ||||||||||||||| |||||||  || |||||||||| ||| |||||||| |||| ||||||||| | ||| ||||||||  | |||||||||| | ||    
T  41882604 ctagagctgtcaaaacgggcggcccggcccgtttagggccggccctaacgggcttcgggctttatcgggccgggccaaaaagctcggttgaaaaatgagc 41882703  T
Q  193 ttgaaatatattacccgagtccggccctccacgg 226  Q
    |||||||||| |||||||| |||||||| |||||    
T  41882704 ttgaaatatactacccgagcccggccctacacgg 41882737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 93 - 227
Target Start/End: Complemental strand, 16624143 - 16624009
Alignment:
Q  93 ctagagctgtcaaaatgggcggcggggaccgtttaggggcggtcctaacggacttcaggctttatcagaccgagccaaaaaattaggttgaaaaacgggc 192  Q
    ||||||||||||||| |||||||  || |||||| ||| ||| |||||||| |||| ||||||||| |  || ||||||||    |||||||||||||||    
T  16624143 ctagagctgtcaaaacgggcggcccggcccgtttggggccggccctaacgggcttcgggctttatcgggtcgggccaaaaagcccggttgaaaaacgggc 16624044  T
Q  193 ttgaaatatattacccgagtccggccctccacggg 227  Q
    |||||||||| |||||||| |||||||| ||||||    
T  16624043 ttgaaatatactacccgagcccggccctacacggg 16624009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 136 - 254
Target Start/End: Complemental strand, 41141247 - 41141129
Alignment:
Q  136 cctaacggacttcaggctttatcagaccgagccaaaaaattaggttgaaaaacgggcttgaaatatattacccgagtccggccctccacgggtcagcccg 235  Q
    |||||||| |||| | ||||||| |  || |||||||| |  ||||||||||||||||||||||||| |||||||| |||||||| |||||| | |||||    
T  41141247 cctaacgggcttcggactttatcgggtcgggccaaaaagtccggttgaaaaacgggcttgaaatatactacccgagcccggccctacacgggccggcccg 41141148  T
Q  236 tattaaaaatgacattttt 254  Q
    |||||||||| ||||||||    
T  41141147 tattaaaaattacattttt 41141129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 94 - 227
Target Start/End: Original strand, 19823063 - 19823196
Alignment:
Q  94 tagagctgtcaaaatgggcggcggggaccgtttaggggcggtcctaacggacttcaggctttatcagaccgagccaaaaaattaggttgaaaaacgggct 193  Q
    |||||||||||||| ||||||   |  |||||||||| ||| |||||||| || |  |||||| ||| ||| ||||||||    ||||||||||||||||    
T  19823063 tagagctgtcaaaacgggcggtccgacccgtttagggccgggcctaacgggctccgagctttagcaggccgggccaaaaagcctggttgaaaaacgggct 19823162  T
Q  194 tgaaatatattacccgagtccggccctccacggg 227  Q
    ||||||||| |||||||| |||||||| ||||||    
T  19823163 tgaaatatactacccgagcccggccctacacggg 19823196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 94 - 227
Target Start/End: Complemental strand, 41856050 - 41855917
Alignment:
Q  94 tagagctgtcaaaatgggcggcggggaccgtttaggggcggtcctaacggacttcaggctttatcagaccgagccaaaaaattaggttgaaaaacgggct 193  Q
    ||||||||| |||| ||||||   || |||||||||||||| ||||||||  ||| || |||||| | ||| |||||||| |  | ||||||||||||||    
T  41856050 tagagctgttaaaacgggcggtccggcccgtttaggggcggccctaacgggtttcgggttttatcgggccgggccaaaaagtccgattgaaaaacgggct 41855951  T
Q  194 tgaaatatattacccgagtccggccctccacggg 227  Q
    ||||||||| |||| ||||| |||||| ||||||    
T  41855950 tgaaatatactacctgagtctggccctacacggg 41855917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 178 - 243
Target Start/End: Original strand, 24534236 - 24534301
Alignment:
Q  178 ggttgaaaaacgggcttgaaatatattacccgagtccggccctccacgggtcagcccgtattaaaa 243  Q
    ||||||||||||||||||||||||| ||| |||| |||||||| |||||||| | |||||||||||    
T  24534236 ggttgaaaaacgggcttgaaatatactacacgagcccggccctacacgggtcgggccgtattaaaa 24534301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 136 - 245
Target Start/End: Original strand, 48499835 - 48499944
Alignment:
Q  136 cctaacggacttcaggctttatcagaccgagccaaaaaattaggttgaaaaacgggcttgaaatatattacccgagtccggccctccacgggtcagcccg 235  Q
    |||||||| |||| ||||||||||| | | | ||||||    ||||||||||||||||||||||||| ||||| ||  ||||||| |||||| ||||||     
T  48499835 cctaacgggcttcgggctttatcaggctgggtcaaaaagcccggttgaaaaacgggcttgaaatatactacccaagctcggccctacacgggccagccct 48499934  T
Q  236 tattaaaaat 245  Q
    ||||||||||    
T  48499935 tattaaaaat 48499944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 121 - 245
Target Start/End: Complemental strand, 41831595 - 41831471
Alignment:
Q  121 ccgtttaggggcggtcctaacggacttcaggctttatcagaccgagccaaaaaattaggttgaaaaacgggcttgaaatatattacccgagtccggccct 220  Q
    |||||||||| ||| | ||| || |||| ||||||||| | |||| |||||||    |||||||||||| ||||||||||||  ||| ||| ||||||||    
T  41831595 ccgtttagggccggccttaatgggcttcgggctttatcgggccgaaccaaaaagcccggttgaaaaacgagcttgaaatataccacctgagcccggccct 41831496  T
Q  221 ccacgggtcagcccgtattaaaaat 245  Q
     |||||| | |||||||||||||||    
T  41831495 acacgggccggcccgtattaaaaat 41831471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 136 - 227
Target Start/End: Original strand, 18861132 - 18861223
Alignment:
Q  136 cctaacggacttcaggctttatcagaccgagccaaaaaattaggttgaaaaacgggcttgaaatatattacccgagtccggccctccacggg 227  Q
    |||||||| |||| |||||||   ||||| ||||||||  | ||||||||| ||||||||||||||| |||| |||||||||||| ||||||    
T  18861132 cctaacgggcttcgggctttagtggaccgggccaaaaagctcggttgaaaagcgggcttgaaatatactacctgagtccggccctacacggg 18861223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 129 - 227
Target Start/End: Original strand, 33492589 - 33492687
Alignment:
Q  129 gggcggtcctaacggacttcaggctttatcagaccgagccaaaaaattaggttgaaaaacgggcttgaaatatattacccgagtccggccctccacggg 227  Q
    |||||| |||||||| ||||  |||||||| |   | ||||||||||  ||||||||||||||| ||||||||| |||||||| |||||||| ||||||    
T  33492589 gggcggccctaacgggcttcgagctttatcggtgtgggccaaaaaatccggttgaaaaacgggcctgaaatatactacccgagcccggccctacacggg 33492687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 178 - 227
Target Start/End: Original strand, 52278339 - 52278388
Alignment:
Q  178 ggttgaaaaacgggcttgaaatatattacccgagtccggccctccacggg 227  Q
    ||||||||||||||||||||||||| |||||||| |||||||| ||||||    
T  52278339 ggttgaaaaacgggcttgaaatatactacccgagcccggccctacacggg 52278388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 136 - 227
Target Start/End: Complemental strand, 6366949 - 6366857
Alignment:
Q  136 cctaacggacttcaggctttatcagaccgagccaaaaaatta-ggttgaaaaacgggcttgaaatatattacccgagtccggccctccacggg 227  Q
    |||||||| |||| ||||||||||| |||  ||||||||    |||||||||||||||||||||| || |||||||| |||||||| ||||||    
T  6366949 cctaacgggcttcgggctttatcaggccggcccaaaaaagcctggttgaaaaacgggcttgaaatgtactacccgagcccggccctacacggg 6366857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 184 - 227
Target Start/End: Original strand, 400896 - 400939
Alignment:
Q  184 aaaacgggcttgaaatatattacccgagtccggccctccacggg 227  Q
    ||||||||||||||||||| ||||||||||||||||| ||||||    
T  400896 aaaacgggcttgaaatatactacccgagtccggccctacacggg 400939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 183 - 254
Target Start/End: Original strand, 40226465 - 40226536
Alignment:
Q  183 aaaaacgggcttgaaatatattacccgagtccggccctccacgggtcagcccgtattaaaaatgacattttt 254  Q
    ||||| || ||||||||||||||||||||||||| ||| ||||||   ||||||||||||||| | ||||||    
T  40226465 aaaaatggtcttgaaatatattacccgagtccggtcctacacgggctggcccgtattaaaaattatattttt 40226536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 94 - 220
Target Start/End: Complemental strand, 32556347 - 32556221
Alignment:
Q  94 tagagctgtcaaaatgggcggcggggaccgtttaggggcggtcctaacggacttcaggctttatcagaccgagccaaaaaattaggttgaaaaacgggct 193  Q
    |||||||||||||| || |||   || ||||||||||  ||||||||||| |||| || |||||| |  || | |||||||   |||||  |||||||||    
T  32556347 tagagctgtcaaaacggacggtccggcccgtttagggctggtcctaacgggcttcgggttttatcgggtcgggtcaaaaaacccggttgggaaacgggct 32556248  T
Q  194 tgaaatatattacccgagtccggccct 220  Q
    ||||||||| |||||||| ||||||||    
T  32556247 tgaaatatactacccgagcccggccct 32556221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 220
Target Start/End: Complemental strand, 49481284 - 49481242
Alignment:
Q  178 ggttgaaaaacgggcttgaaatatattacccgagtccggccct 220  Q
    ||||||||||||||||||||||||| |||| ||||||||||||    
T  49481284 ggttgaaaaacgggcttgaaatatactacctgagtccggccct 49481242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 178 - 227
Target Start/End: Complemental strand, 26489718 - 26489669
Alignment:
Q  178 ggttgaaaaacgggcttgaaatatattacccgagtccggccctccacggg 227  Q
    ||||||||||||||||||||||||| || |||||||||| ||| ||||||    
T  26489718 ggttgaaaaacgggcttgaaatatactaaccgagtccggtcctacacggg 26489669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 184 - 229
Target Start/End: Complemental strand, 35667185 - 35667140
Alignment:
Q  184 aaaacgggcttgaaatatattacccgagtccggccctccacgggtc 229  Q
    ||||||||||||||||||| |||||||| |||||||| ||||||||    
T  35667185 aaaacgggcttgaaatatactacccgagcccggccctacacgggtc 35667140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 121 - 218
Target Start/End: Complemental strand, 42248589 - 42248493
Alignment:
Q  121 ccgtttaggggcggtcctaacggacttcaggctttatcagaccgagccaaaaaattaggttgaaaaacgggcttgaaatatattacccgagtccggcc 218  Q
    |||||||||| |||||||||| | |||  ||||||||| |  || ||||||||    ||||||||| ||||||||||||||| |||||||||||||||    
T  42248589 ccgtttagggtcggtcctaacaggctttgggctttatcgggtcgggccaaaaagcccggttgaaaa-cgggcttgaaatatactacccgagtccggcc 42248493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 121 - 254
Target Start/End: Complemental strand, 44946965 - 44946833
Alignment:
Q  121 ccgtttaggggcggtcctaacggacttcaggctttatcagaccgagccaaaaaattaggttgaaaaacgggcttgaaatatattacccgagtccggccct 220  Q
    |||||||||| ||| |||||||| |||| || |||||| |  || |||||||||| || | ||||||||||||| ||||||| |||| ||| || ||| |    
T  44946965 ccgtttagggtcggccctaacgggcttcgggatttatcgggtcgggccaaaaaatcagct-gaaaaacgggcttaaaatatactacctgagcccagcctt 44946867  T
Q  221 ccacgggtcagcccgtattaaaaatgacattttt 254  Q
     ||| ||   ||||||||||||||| ||||||||    
T  44946866 acacaggctggcccgtattaaaaattacattttt 44946833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 220
Target Start/End: Original strand, 54552949 - 54553032
Alignment:
Q  136 cctaacggacttcaggctttatcagaccgagccaaaaaattaggttgaaaaacgggcttgaaatatattacccgagtccggccct 220  Q
    |||||||| |||| ||||||||| | ||| ||||||||    ||||||||||| ||||||||||||| |||||||| ||||||||    
T  54552949 cctaacgg-cttcgggctttatcgggccgggccaaaaagcccggttgaaaaacaggcttgaaatatactacccgagcccggccct 54553032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 184 - 227
Target Start/End: Original strand, 1138535 - 1138578
Alignment:
Q  184 aaaacgggcttgaaatatattacccgagtccggccctccacggg 227  Q
    ||||||||||||||||||| |||||||| |||||||| ||||||    
T  1138535 aaaacgggcttgaaatatactacccgagcccggccctacacggg 1138578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 184 - 227
Target Start/End: Original strand, 13562940 - 13562983
Alignment:
Q  184 aaaacgggcttgaaatatattacccgagtccggccctccacggg 227  Q
    ||||||||||||||||||| |||||||| |||||||| ||||||    
T  13562940 aaaacgggcttgaaatatactacccgagcccggccctacacggg 13562983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 184 - 227
Target Start/End: Complemental strand, 15195058 - 15195015
Alignment:
Q  184 aaaacgggcttgaaatatattacccgagtccggccctccacggg 227  Q
    ||||||||||||||||||| |||||||| |||||||| ||||||    
T  15195058 aaaacgggcttgaaatatactacccgagcccggccctacacggg 15195015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 184 - 227
Target Start/End: Complemental strand, 21808337 - 21808294
Alignment:
Q  184 aaaacgggcttgaaatatattacccgagtccggccctccacggg 227  Q
    ||||||||||||||||||| |||||||| |||||||| ||||||    
T  21808337 aaaacgggcttgaaatatactacccgagcccggccctacacggg 21808294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 184 - 227
Target Start/End: Complemental strand, 35393326 - 35393283
Alignment:
Q  184 aaaacgggcttgaaatatattacccgagtccggccctccacggg 227  Q
    ||||||||||||||||||| |||||||| |||||||| ||||||    
T  35393326 aaaacgggcttgaaatatactacccgagcccggccctacacggg 35393283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 184 - 227
Target Start/End: Original strand, 40730749 - 40730792
Alignment:
Q  184 aaaacgggcttgaaatatattacccgagtccggccctccacggg 227  Q
    ||||||||||||||||||| |||||||| |||||||| ||||||    
T  40730749 aaaacgggcttgaaatatactacccgagcccggccctacacggg 40730792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 184 - 227
Target Start/End: Complemental strand, 48153285 - 48153242
Alignment:
Q  184 aaaacgggcttgaaatatattacccgagtccggccctccacggg 227  Q
    ||||||||||||||||||| |||||||| |||||||| ||||||    
T  48153285 aaaacgggcttgaaatatactacccgagcccggccctacacggg 48153242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 184 - 227
Target Start/End: Original strand, 54093528 - 54093571
Alignment:
Q  184 aaaacgggcttgaaatatattacccgagtccggccctccacggg 227  Q
    ||||||||||||||||||| |||||||| |||||||| ||||||    
T  54093528 aaaacgggcttgaaatatactacccgagcccggccctacacggg 54093571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 184 - 227
Target Start/End: Original strand, 56263945 - 56263988
Alignment:
Q  184 aaaacgggcttgaaatatattacccgagtccggccctccacggg 227  Q
    ||||||||||||||||||| |||||||| |||||||| ||||||    
T  56263945 aaaacgggcttgaaatatactacccgagcccggccctacacggg 56263988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 218
Target Start/End: Original strand, 19474149 - 19474231
Alignment:
Q  136 cctaacggacttcaggctttatcagaccgagccaaaaaattaggttgaaaaacgggcttgaaatatattacccgagtccggcc 218  Q
    |||||||| |||| || ||||||| |||| ||||||||    |||||||||| |||||||||||||| |||| ||| ||||||    
T  19474149 cctaacgggcttcgggttttatcaaaccgggccaaaaagcccggttgaaaaatgggcttgaaatatactaccagagcccggcc 19474231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 227
Target Start/End: Complemental strand, 34436470 - 34436429
Alignment:
Q  186 aacgggcttgaaatatattacccgagtccggccctccacggg 227  Q
    ||||||||||||||||| |||||||| |||||||| ||||||    
T  34436470 aacgggcttgaaatatactacccgagcccggccctacacggg 34436429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 220
Target Start/End: Original strand, 42586928 - 42586968
Alignment:
Q  180 ttgaaaaacgggcttgaaatatattacccgagtccggccct 220  Q
    ||||||||||| ||||||||||| |||||||| ||||||||    
T  42586928 ttgaaaaacggacttgaaatatactacccgagcccggccct 42586968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 54; Significance: 5e-22; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 94 - 227
Target Start/End: Original strand, 33814377 - 33814509
Alignment:
Q  94 tagagctgtcaaaatgggcggcggggaccgtttaggggcggtcctaacggacttcaggctttatcagaccgagccaaaaaattaggttgaaaaacgggct 193  Q
    |||||||||||||| || ||||  || |||||||||| ||| |||||||| |||||||||||||| | ||| ||||||||    |||||||||||||| |    
T  33814377 tagagctgtcaaaacggacggcccggtccgtttagggccgg-cctaacgggcttcaggctttatcgggccgggccaaaaagcccggttgaaaaacgggtt 33814475  T
Q  194 tgaaatatattacccgagtccggccctccacggg 227  Q
    ||||||||| |||| |||||||||||| ||||||    
T  33814476 tgaaatatactacctgagtccggccctacacggg 33814509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 94 - 227
Target Start/End: Original strand, 33873847 - 33873979
Alignment:
Q  94 tagagctgtcaaaatgggcggcggggaccgtttaggggcggtcctaacggacttcaggctttatcagaccgagccaaaaaattaggttgaaaaacgggct 193  Q
    |||||||||||||| || ||||  || |||||||||| ||| |||||||| |||||||||||||| | ||| ||||||||    |||||||||||||| |    
T  33873847 tagagctgtcaaaacggacggcccggtccgtttagggccgg-cctaacgggcttcaggctttatcgggccgggccaaaaagcccggttgaaaaacgggtt 33873945  T
Q  194 tgaaatatattacccgagtccggccctccacggg 227  Q
    ||||||||| |||| |||||||||||| ||||||    
T  33873946 tgaaatatactacctgagtccggccctacacggg 33873979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 94 - 227
Target Start/End: Complemental strand, 44922866 - 44922733
Alignment:
Q  94 tagagctgtcaaaatgggcggcggggaccgtttaggggcggtcctaacggacttcaggctttatcagaccgagccaaaaaattaggttgaaaaacgggct 193  Q
    |||||||||||||| ||||||   || || |||||||  || |||||||| |||| ||||||||| ||||| |||||||||   ||||| ||||||| ||    
T  44922866 tagagctgtcaaaacgggcggtccggcccatttagggctggccctaacgggcttcgggctttatcggaccgggccaaaaaacccggttggaaaacggact 44922767  T
Q  194 tgaaatatattacccgagtccggccctccacggg 227  Q
    ||||||||| ||||| ||||||||||| ||||||    
T  44922766 tgaaatatactacccaagtccggccctacacggg 44922733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 94 - 227
Target Start/End: Original strand, 50511431 - 50511565
Alignment:
Q  94 tagagctgtcaaaatgggcggcggggaccgtttaggggcggtcctaacggacttcaggctttatcagaccgagccaaaaaattaggttga-aaaacgggc 192  Q
    |||||||||||||| ||||||   || |||||||||  ||| ||||| || |||| || |||||| | ||| |||||||| |  |||||| |||||||||    
T  50511431 tagagctgtcaaaacgggcggtccggcccgtttaggatcggccctaatgggcttcgggttttatcgggccgggccaaaaagtccggttgataaaacgggc 50511530  T
Q  193 ttgaaatatattacccgagtccggccctccacggg 227  Q
    |||||||||| ||||||||||||||||| ||||||    
T  50511531 ttgaaatatactacccgagtccggccctacacggg 50511565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 94 - 211
Target Start/End: Original strand, 40411981 - 40412098
Alignment:
Q  94 tagagctgtcaaaatgggcggcggggaccgtttaggggcggtcctaacggacttcaggctttatcagaccgagccaaaaaattaggttgaaaaacgggct 193  Q
    |||||||||||||| ||||||   || ||||||| || ||| |||||||| |||| ||||||||| | ||| ||||||||    ||||||||||||||||    
T  40411981 tagagctgtcaaaacgggcggtccggcccgtttatggccggccctaacgggcttcgggctttatcgggccgggccaaaaagcccggttgaaaaacgggct 40412080  T
Q  194 tgaaatatattacccgag 211  Q
    ||||||||| ||||||||    
T  40412081 tgaaatatactacccgag 40412098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 94 - 229
Target Start/End: Complemental strand, 21720486 - 21720350
Alignment:
Q  94 tagagctgtcaaaatgggcggcggggaccgtttaggggcggtcctaacggacttcaggctttatcagaccgagccaaaaaatta-ggttgaaaaacgggc 192  Q
    |||||||||||||| ||||||   || |||||||||| ||| |||||||| |||| ||||||||| |  || || |||||||   |||||||||||||||    
T  21720486 tagagctgtcaaaacgggcggaccggcccgtttagggccgggcctaacgggcttcgggctttatcgggtcgggcaaaaaaatcccggttgaaaaacgggc 21720387  T
Q  193 ttgaaatatattacccgagtccggccctccacgggtc 229  Q
    |||||||||| |||| ||| |||||||| | ||||||    
T  21720386 ttgaaatatactacctgagaccggccctactcgggtc 21720350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 136 - 254
Target Start/End: Original strand, 25422782 - 25422900
Alignment:
Q  136 cctaacggacttcaggctttatcagaccgagccaaaaaattaggttgaaaaacgggcttgaaatatattacccgagtccggccctccacgggtcagcccg 235  Q
    |||||||| |||| ||||||||| |  || ||||||||    ||||| |||||||||| |||||||| |||||||| |||||||| |||||| | | |||    
T  25422782 cctaacgggcttcgggctttatcgggtcgggccaaaaagcccggttggaaaacgggctggaaatatactacccgagcccggccctacacgggccggtccg 25422881  T
Q  236 tattaaaaatgacattttt 254  Q
    |||||||||| ||||||||    
T  25422882 tattaaaaattacattttt 25422900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 121 - 219
Target Start/End: Complemental strand, 27415628 - 27415530
Alignment:
Q  121 ccgtttaggggcggtcctaacggacttcaggctttatcagaccgagccaaaaaattaggttgaaaaacgggcttgaaatatattacccgagtccggccc 219  Q
    |||||||||  ||| |||||||| |||| || |||| | || || |||||||| |  |||||||||||||||||||||||||||||||||| |||||||    
T  27415628 ccgtttaggaccgggcctaacgggcttcgggttttagcggatcgggccaaaaagtccggttgaaaaacgggcttgaaatatattacccgagcccggccc 27415530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 137 - 227
Target Start/End: Original strand, 45793558 - 45793649
Alignment:
Q  137 ctaacggacttcaggctttatcagaccgagccaaaaaattaggttgaaaa-acgggcttgaaatatattacccgagtccggccctccacggg 227  Q
    |||||||||||| ||||||||  | ||| |||||||| || ||||||||| |||||||| ||||||| |||||||||||| |||| ||||||    
T  45793558 ctaacggacttcgggctttattgggccgggccaaaaagttcggttgaaaaaacgggcttaaaatatactacccgagtccgaccctacacggg 45793649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 94 - 220
Target Start/End: Complemental strand, 700604 - 700479
Alignment:
Q  94 tagagctgtcaaaatgggcggcggggaccgtttaggggcggtcctaacggacttcaggctttatcagaccgagccaaaaaattaggttgaaaaacgggct 193  Q
    |||||||||||||| ||||| |  || |||||||||| ||| |||||| | || | ||||||||| | ||| |||||||| |  ||||||||| ||||||    
T  700604 tagagctgtcaaaacgggcgacccggcccgtttagggccggccctaacaggctccgggctttatcgggccgggccaaaaagtccggttgaaaa-cgggct 700506  T
Q  194 tgaaatatattacccgagtccggccct 220  Q
    ||||||||| |||||||| ||| ||||    
T  700505 tgaaatatactacccgagcccgaccct 700479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 136 - 210
Target Start/End: Original strand, 6714051 - 6714125
Alignment:
Q  136 cctaacggacttcaggctttatcagaccgagccaaaaaattaggttgaaaaacgggcttgaaatatattacccga 210  Q
    ||||||||||||| ||||||||| ||||| | ||||||    ||||||||||||||||||||||||| |||||||    
T  6714051 cctaacggacttcgggctttatcggaccgggtcaaaaagcccggttgaaaaacgggcttgaaatatactacccga 6714125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 94 - 227
Target Start/End: Original strand, 12254644 - 12254777
Alignment:
Q  94 tagagctgtcaaaatgggcggcggggaccgtttaggggcggtcctaacggacttcaggctttatcagaccgagccaaaaaattaggttgaaaaacgggct 193  Q
    |||||||||||||| |||||||     | |||||||| ||| |||||||| ||||   ||||||| | ||| |||||||||   |||||||||||||| |    
T  12254644 tagagctgtcaaaacgggcggcccaacctgtttagggtcggccctaacgggcttcgaactttatcgggccgggccaaaaaacccggttgaaaaacgggtt 12254743  T
Q  194 tgaaatatattacccgagtccggccctccacggg 227  Q
    ||||||||| |||  |||||||||||| ||||||    
T  12254744 tgaaatatactacttgagtccggccctacacggg 12254777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 47039934 - 47039983
Alignment:
Q  177 aggttgaaaaacgggcttgaaatatattacccgagtccggccctccacgg 226  Q
    ||||||||||||||||||||||||||||||| ||| |||||||| |||||    
T  47039934 aggttgaaaaacgggcttgaaatatattacctgagcccggccctacacgg 47039983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 136 - 229
Target Start/End: Original strand, 50863339 - 50863432
Alignment:
Q  136 cctaacggacttcaggctttatcagaccgagccaaaaaattaggttgaaaaacgggcttgaaatatattacccgagtccggccctccacgggtc 229  Q
    |||||||| |||||||||||||| | |   |||||||||   ||||||||||||||||| ||||||| || ||||| |||||||| ||||||||    
T  50863339 cctaacgggcttcaggctttatcgggctttgccaaaaaacccggttgaaaaacgggcttcaaatatactatccgagcccggccctacacgggtc 50863432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 136 - 220
Target Start/End: Complemental strand, 1068426 - 1068342
Alignment:
Q  136 cctaacggacttcaggctttatcagaccgagccaaaaaattaggttgaaaaacgggcttgaaatatattacccgagtccggccct 220  Q
    |||||||| |||  ||||||||| | ||||||| ||||    ||||||||||||||||||||||||| |||||||| ||||||||    
T  1068426 cctaacgggctttgggctttatcgggccgagccgaaaagcccggttgaaaaacgggcttgaaatataatacccgagcccggccct 1068342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 184 - 227
Target Start/End: Original strand, 44372423 - 44372466
Alignment:
Q  184 aaaacgggcttgaaatatattacccgagtccggccctccacggg 227  Q
    |||||||||||||||||||||||||||| |||||||| ||||||    
T  44372423 aaaacgggcttgaaatatattacccgagcccggccctacacggg 44372466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 178 - 227
Target Start/End: Original strand, 48605285 - 48605334
Alignment:
Q  178 ggttgaaaaacgggcttgaaatatattacccgagtccggccctccacggg 227  Q
    |||||||||||||| |||||||||| |||||||| ||| |||||||||||    
T  48605285 ggttgaaaaacgggtttgaaatatactacccgagcccgaccctccacggg 48605334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 178 - 227
Target Start/End: Original strand, 52928974 - 52929023
Alignment:
Q  178 ggttgaaaaacgggcttgaaatatattacccgagtccggccctccacggg 227  Q
    ||||||||||||||||||||||||| |||||||  |||||||| ||||||    
T  52928974 ggttgaaaaacgggcttgaaatatactacccgaacccggccctacacggg 52929023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 184 - 227
Target Start/End: Original strand, 342678 - 342721
Alignment:
Q  184 aaaacgggcttgaaatatattacccgagtccggccctccacggg 227  Q
    ||||||||||||||||||| |||||||||| |||||| ||||||    
T  342678 aaaacgggcttgaaatatactacccgagtctggccctacacggg 342721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 184 - 227
Target Start/End: Complemental strand, 5115483 - 5115440
Alignment:
Q  184 aaaacgggcttgaaatatattacccgagtccggccctccacggg 227  Q
    ||||||||||||||||||| |||||||| |||||||| ||||||    
T  5115483 aaaacgggcttgaaatatactacccgagcccggccctacacggg 5115440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 184 - 227
Target Start/End: Complemental strand, 19422542 - 19422499
Alignment:
Q  184 aaaacgggcttgaaatatattacccgagtccggccctccacggg 227  Q
    ||||||||||||||||||| |||||||| |||||||| ||||||    
T  19422542 aaaacgggcttgaaatatactacccgagcccggccctacacggg 19422499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 137 - 227
Target Start/End: Complemental strand, 20724107 - 20724016
Alignment:
Q  137 ctaacggacttcaggctttatcagaccgagccaaaaaattaggttgaaaaa-cgggcttgaaatatattacccgagtccggccctccacggg 227  Q
    ||||||| |||| ||||||||| |||||  ||||||| |  |||||||||| ||||||| ||||||| || ||||| |||||||| ||||||    
T  20724107 ctaacgggcttcgggctttatcggaccggaccaaaaagtccggttgaaaaaacgggcttaaaatatactatccgagcccggccctacacggg 20724016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 180 - 227
Target Start/End: Original strand, 23973719 - 23973766
Alignment:
Q  180 ttgaaaaacgggcttgaaatatattacccgagtccggccctccacggg 227  Q
    ||||||||||| ||||||||||| |||||||| |||||||| ||||||    
T  23973719 ttgaaaaacggtcttgaaatatactacccgagcccggccctacacggg 23973766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 184 - 227
Target Start/End: Original strand, 41310068 - 41310111
Alignment:
Q  184 aaaacgggcttgaaatatattacccgagtccggccctccacggg 227  Q
    ||||||||||||||||||| |||||||| |||||||| ||||||    
T  41310068 aaaacgggcttgaaatatactacccgagcccggccctacacggg 41310111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 184 - 227
Target Start/End: Original strand, 48812081 - 48812124
Alignment:
Q  184 aaaacgggcttgaaatatattacccgagtccggccctccacggg 227  Q
    ||||||||||||||||||| |||||||| |||||||| ||||||    
T  48812081 aaaacgggcttgaaatatactacccgagcccggccctacacggg 48812124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 229
Target Start/End: Complemental strand, 28199790 - 28199745
Alignment:
Q  184 aaaacgggcttgaaatatattacccgagtccggccctccacgggtc 229  Q
    ||||||||||||||||||| |||||||| ||| |||| ||||||||    
T  28199790 aaaacgggcttgaaatatactacccgagcccgaccctacacgggtc 28199745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 220
Target Start/End: Original strand, 39994951 - 39995036
Alignment:
Q  136 cctaacggacttcaggctttatcagaccgagccaaaaaattaggttga-aaaacgggcttgaaatatattacccgagtccggccct 220  Q
    |||| ||| |||| ||||||| | ||||| |||||||||   |||||| ||||||||||||||||||| | |||||| ||||||||    
T  39994951 cctagcgggcttcgggctttagccgaccgggccaaaaaacccggttgacaaaacgggcttgaaatatactgcccgagcccggccct 39995036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 219
Target Start/End: Complemental strand, 30723846 - 30723810
Alignment:
Q  183 aaaaacgggcttgaaatatattacccgagtccggccc 219  Q
    |||||||||||||||||||| |||||||| |||||||    
T  30723846 aaaaacgggcttgaaatatactacccgagcccggccc 30723810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 227
Target Start/End: Original strand, 35985009 - 35985053
Alignment:
Q  183 aaaaacgggcttgaaatatattacccgagtccggccctccacggg 227  Q
    |||||||||||||||||||| |||| ||| |||||||| ||||||    
T  35985009 aaaaacgggcttgaaatatactacctgagcccggccctacacggg 35985053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 52; Significance: 7e-21; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 94 - 245
Target Start/End: Original strand, 21151193 - 21151344
Alignment:
Q  94 tagagctgtcaaaatgggcggcggggaccgtttaggggcggtcctaacggacttcaggctttatcagaccgagccaaaaaattaggttgaaaaacgggct 193  Q
    |||||||||||||| |||||||  || |||||||||| ||| ||| | || |||| ||||||||| | ||| ||||||||    |||||||||| |||||    
T  21151193 tagagctgtcaaaacgggcggcccggcccgtttagggccggccctgaagggcttcgggctttatcggtccgggccaaaaagcccggttgaaaaatgggct 21151292  T
Q  194 tgaaatatattacccgagtccggccctccacgggtcagcccgtattaaaaat 245  Q
    ||||||||| || ||||| |||||||| |||||| | ||| |||||||||||    
T  21151293 tgaaatatactatccgagcccggccctacacgggccggcctgtattaaaaat 21151344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 94 - 245
Target Start/End: Original strand, 7344200 - 7344351
Alignment:
Q  94 tagagctgtcaaaatgggcggcggggaccgtttaggggcggtcctaacggacttcaggctttatcagaccgagccaaaaaattaggttgaaaaacgggct 193  Q
    |||||||||||||| || ||||  |  | |||||||| |||| ||||||| |||| ||||||||| | ||| ||||||||    ||||||||||||||||    
T  7344200 tagagctgtcaaaacggacggcccgacctgtttagggccggttctaacgggcttcgggctttatcgggccgggccaaaaagcccggttgaaaaacgggct 7344299  T
Q  194 tgaaatatattacccgagtccggccctccacgggtcagcccgtattaaaaat 245  Q
    ||||||||| |||| ||| |||||||| || ||| | ||| |||||||||||    
T  7344300 tgaaatatactacctgagcccggccctacatgggccggcctgtattaaaaat 7344351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 94 - 227
Target Start/End: Original strand, 14505342 - 14505476
Alignment:
Q  94 tagagctgtcaaaatgggcggcggggaccgtttaggggcggtcctaacggacttcaggctttatcagaccgagccaaaaaattaggttga-aaaacgggc 192  Q
    |||||||||||||| ||||||   || | |||||||| ||| |||||||| |||| ||||||||| | ||| | |||||| |  |||||| |||||||||    
T  14505342 tagagctgtcaaaacgggcggtccggcctgtttagggccggccctaacgggcttcgggctttatcgggccgggtcaaaaagtccggttgataaaacgggc 14505441  T
Q  193 ttgaaatatattacccgagtccggccctccacggg 227  Q
    |||||||||| |||||||| |||||||| ||||||    
T  14505442 ttgaaatatactacccgagcccggccctacacggg 14505476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 94 - 227
Target Start/End: Complemental strand, 17017115 - 17016982
Alignment:
Q  94 tagagctgtcaaaatgggcggcggggaccgtttaggggcggtcctaacggacttcaggctttatcagaccgagccaaaaaattaggttgaaaaacgggct 193  Q
    |||||||||||||| || ||||  |  |||||||||  ||| |||||||| |||| || |||||| | ||| |||||||| |  ||||||||||||||||    
T  17017115 tagagctgtcaaaacggacggcccgacccgtttaggtccggccctaacgggcttcgggttttatcgggccgggccaaaaagtccggttgaaaaacgggct 17017016  T
Q  194 tgaaatatattacccgagtccggccctccacggg 227  Q
    ||||||||| |||| ||| |||||||| ||||||    
T  17017015 tgaaatatactacctgagcccggccctacacggg 17016982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 121 - 227
Target Start/End: Complemental strand, 24317176 - 24317070
Alignment:
Q  121 ccgtttaggggcggtcctaacggacttcaggctttatcagaccgagccaaaaaattaggttgaaaaacgggcttgaaatatattacccgagtccggccct 220  Q
    |||||||||| ||| |||||||| |||| ||||||||| |  || ||||||||    ||||||||||||||||||||||||| |||||||| |||| |||    
T  24317176 ccgtttagggccggccctaacgggcttcgggctttatcgggtcgggccaaaaagaccggttgaaaaacgggcttgaaatatactacccgagcccgggcct 24317077  T
Q  221 ccacggg 227  Q
     ||||||    
T  24317076 acacggg 24317070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 183 - 254
Target Start/End: Complemental strand, 8322269 - 8322198
Alignment:
Q  183 aaaaacgggcttgaaatatattacccgagtccggccctccacgggtcagcccgtattaaaaatgacattttt 254  Q
    |||||||||||||||||||| |||||||| |||||||| || ||| | |||| |||||||||| ||||||||    
T  8322269 aaaaacgggcttgaaatatactacccgagcccggccctacatgggccggcccttattaaaaattacattttt 8322198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 94 - 245
Target Start/End: Original strand, 21158334 - 21158485
Alignment:
Q  94 tagagctgtcaaaatgggcggcggggaccgtttaggggcggtcctaacggacttcaggctttatcagaccgagccaaaaaattaggttgaaaaacgggct 193  Q
    |||||||||||||| |||| ||  |  |||||||||| ||| ||| | || |||| ||||||||| | | | ||||||||    ||||||||||||||||    
T  21158334 tagagctgtcaaaacgggcagcccgacccgtttagggccggccctgaagggcttcgggctttatcggtctgggccaaaaagcccggttgaaaaacgggct 21158433  T
Q  194 tgaaatatattacccgagtccggccctccacgggtcagcccgtattaaaaat 245  Q
    ||||||||| || ||||  |||||||| |||||| | ||| |||||||||||    
T  21158434 tgaaatatactatccgaacccggcccttcacgggccggcctgtattaaaaat 21158485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 136 - 241
Target Start/End: Complemental strand, 18922775 - 18922669
Alignment:
Q  136 cctaacggacttcaggctttatcagaccgagccaaaaaattaggttgaaaaa-cgggcttgaaatatattacccgagtccggccctccacgggtcagccc 234  Q
    ||||| || |||| ||||||||| ||||| ||||||||    |||||||||| ||||||||||||||| ||||| ||||||||||| ||||||   ||||    
T  18922775 cctaatgggcttcgggctttatcggaccgggccaaaaagcccggttgaaaaaacgggcttgaaatatactacccaagtccggccctacacgggcaggccc 18922676  T
Q  235 gtattaa 241  Q
    |||||||    
T  18922675 gtattaa 18922669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 94 - 220
Target Start/End: Original strand, 19646397 - 19646523
Alignment:
Q  94 tagagctgtcaaaatgggcggcggggaccgtttaggggcggtcctaacggacttcaggctttatcagaccgagccaaaaaattaggttgaaaaacgggct 193  Q
    |||||||||||||| ||| |||  |  |||||||||| |||  ||||||| |||||||||||||| |  || | ||||||    ||||||||||||||||    
T  19646397 tagagctgtcaaaacgggtggcccgatccgtttagggccggctctaacgggcttcaggctttatcgggtcgggtcaaaaatcccggttgaaaaacgggct 19646496  T
Q  194 tgaaatatattacccgagtccggccct 220  Q
    ||||||||| |||||||| | ||||||    
T  19646497 tgaaatatactacccgagcctggccct 19646523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 178 - 227
Target Start/End: Complemental strand, 4725770 - 4725721
Alignment:
Q  178 ggttgaaaaacgggcttgaaatatattacccgagtccggccctccacggg 227  Q
    |||||||||||| |||||||||||| ||||||||||||||||| ||||||    
T  4725770 ggttgaaaaacgagcttgaaatatactacccgagtccggccctacacggg 4725721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 94 - 202
Target Start/End: Complemental strand, 16749592 - 16749484
Alignment:
Q  94 tagagctgtcaaaatgggcggcggggaccgtttaggggcggtcctaacggacttcaggctttatcagaccgagccaaaaaattaggttgaaaaacgggct 193  Q
    |||||||||||||| |||||||  || ||||||| || ||| |||||||  |||| ||||||| | ||| | ||||||||    ||||||||||||||||    
T  16749592 tagagctgtcaaaacgggcggcctggcccgtttaaggccgggcctaacgagcttcgggctttagcggactgggccaaaaagcccggttgaaaaacgggct 16749493  T
Q  194 tgaaatata 202  Q
    |||||||||    
T  16749492 tgaaatata 16749484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 94 - 245
Target Start/End: Original strand, 5360632 - 5360783
Alignment:
Q  94 tagagctgtcaaaatgggcggcggggaccgtttaggggcggtcctaacggacttcaggctttatcagaccgagccaaaaaattaggttgaaaaacgggct 193  Q
    |||||||||||||| || |||   || ||||||| || ||| |||||||| |||| ||||||| | |||||  |||||||     ||| |||||||| ||    
T  5360632 tagagctgtcaaaacggacggtccggcccgtttaaggccgggcctaacgggcttcgggctttagcggaccggaccaaaaagcccagtttaaaaacggact 5360731  T
Q  194 tgaaatatattacccgagtccggccctccacgggtcagcccgtattaaaaat 245  Q
    ||||||||| |||||||| |||||||  |||| | | |||||||||||||||    
T  5360732 tgaaatatactacccgagcccggcccaacacgagccggcccgtattaaaaat 5360783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 184 - 227
Target Start/End: Original strand, 1840112 - 1840155
Alignment:
Q  184 aaaacgggcttgaaatatattacccgagtccggccctccacggg 227  Q
    ||||||||||||||||||| |||||||| |||||||| ||||||    
T  1840112 aaaacgggcttgaaatatactacccgagcccggccctacacggg 1840155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 184 - 227
Target Start/End: Original strand, 2465846 - 2465889
Alignment:
Q  184 aaaacgggcttgaaatatattacccgagtccggccctccacggg 227  Q
    ||||||||||||||||||| |||||||| |||||||| ||||||    
T  2465846 aaaacgggcttgaaatatactacccgagcccggccctacacggg 2465889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 184 - 227
Target Start/End: Complemental strand, 6286682 - 6286639
Alignment:
Q  184 aaaacgggcttgaaatatattacccgagtccggccctccacggg 227  Q
    ||||||||||||||||||| |||||||| |||||||| ||||||    
T  6286682 aaaacgggcttgaaatatactacccgagcccggccctacacggg 6286639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 184 - 227
Target Start/End: Complemental strand, 8506231 - 8506188
Alignment:
Q  184 aaaacgggcttgaaatatattacccgagtccggccctccacggg 227  Q
    ||||||||||||||||||| |||||||| |||||||| ||||||    
T  8506231 aaaacgggcttgaaatatactacccgagcccggccctacacggg 8506188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 184 - 227
Target Start/End: Complemental strand, 20123283 - 20123240
Alignment:
Q  184 aaaacgggcttgaaatatattacccgagtccggccctccacggg 227  Q
    ||||||||||||||||||| |||||||| |||||||| ||||||    
T  20123283 aaaacgggcttgaaatatactacccgagcccggccctacacggg 20123240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 184 - 227
Target Start/End: Original strand, 27344795 - 27344838
Alignment:
Q  184 aaaacgggcttgaaatatattacccgagtccggccctccacggg 227  Q
    ||||||||||||||||||| |||||||| |||||||| ||||||    
T  27344795 aaaacgggcttgaaatatactacccgagcccggccctacacggg 27344838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 166 - 220
Target Start/End: Original strand, 28758905 - 28758960
Alignment:
Q  166 gccaaaaaattaggttga-aaaacgggcttgaaatatattacccgagtccggccct 220  Q
    ||||||||||  |||||| |||||| |||||||||||| |||||||||||||||||    
T  28758905 gccaaaaaatccggttgacaaaacgagcttgaaatatactacccgagtccggccct 28758960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 184 - 227
Target Start/End: Complemental strand, 39049506 - 39049463
Alignment:
Q  184 aaaacgggcttgaaatatattacccgagtccggccctccacggg 227  Q
    ||||||||||||||||||| |||||||| |||||||| ||||||    
T  39049506 aaaacgggcttgaaatatactacccgagcccggccctacacggg 39049463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 184 - 227
Target Start/End: Complemental strand, 39089505 - 39089462
Alignment:
Q  184 aaaacgggcttgaaatatattacccgagtccggccctccacggg 227  Q
    ||||||||||||||||||| |||||||| |||||||| ||||||    
T  39089505 aaaacgggcttgaaatatactacccgagcccggccctacacggg 39089462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 227
Target Start/End: Original strand, 7073534 - 7073578
Alignment:
Q  183 aaaaacgggcttgaaatatattacccgagtccggccctccacggg 227  Q
    |||||||||||||||||||| |||||||| || ||||| ||||||    
T  7073534 aaaaacgggcttgaaatatactacccgagcccagccctacacggg 7073578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 215
Target Start/End: Complemental strand, 17321018 - 17320938
Alignment:
Q  136 cctaacggacttcaggctttatcagaccgagccaaaaaattaggttg-aaaaacgggcttgaaatatattacccgagtccg 215  Q
    |||||||| |||||||||||||| | ||| ||||||||    ||||| ||||||||  |||||||||| ||||||||||||    
T  17321018 cctaacgggcttcaggctttatcgggccgggccaaaaagcccggttgaaaaaacggatttgaaatatactacccgagtccg 17320938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 52; Significance: 7e-21; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 94 - 216
Target Start/End: Complemental strand, 30556282 - 30556159
Alignment:
Q  94 tagagctgtcaaaatgggcggcggggaccgtttaggggcggtcctaacggacttcaggctttatcagaccgagccaaaaaattaggttga-aaaacgggc 192  Q
    ||||| |||||||| |||||||  || |||||||||| ||| |||||||| |||| ||||||||| ||||| ||||||||    |||||| |||||||||    
T  30556282 tagagttgtcaaaacgggcggcccggcccgtttagggccggccctaacgggcttcgggctttatcggaccgggccaaaaagcccggttgataaaacgggc 30556183  T
Q  193 ttgaaatatattacccgagtccgg 216  Q
    |||||||||| |||||||||||||    
T  30556182 ttgaaatatactacccgagtccgg 30556159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 132 - 227
Target Start/End: Complemental strand, 41644921 - 41644826
Alignment:
Q  132 cggtcctaacggacttcaggctttatcagaccgagccaaaaaattaggttgaaaaacgggcttgaaatatattacccgagtccggccctccacggg 227  Q
    |||||||||||| |||| ||||||||| ||||| || ||||| |  ||||||||||||| ||||||||||| |||||||| |||||||| ||||||    
T  41644921 cggtcctaacgggcttcgggctttatcggaccgggctaaaaagtccggttgaaaaacggacttgaaatatagtacccgagcccggccctacacggg 41644826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 94 - 227
Target Start/End: Complemental strand, 10710465 - 10710333
Alignment:
Q  94 tagagctgtcaaaatgggcggcggggaccgtttaggggcggtcctaacggacttcaggctttatcagaccgagccaaaaaattaggttgaaaaacgggct 193  Q
    |||||||||||||| |||||||  || |||||||||| ||| |||||||| |||||||||||||| | | | ||||||||    |||||||||||  |||    
T  10710465 tagagctgtcaaaacgggcggcccggcccgtttagggccggccctaacgggcttcaggctttatcgggcagggccaaaaagcccggttgaaaaac-agct 10710367  T
Q  194 tgaaatatattacccgagtccggccctccacggg 227  Q
    ||||||||| ||| |||| |||||||| ||||||    
T  10710366 tgaaatatactactcgagcccggccctacacggg 10710333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 184 - 254
Target Start/End: Complemental strand, 42800916 - 42800846
Alignment:
Q  184 aaaacgggcttgaaatatattacccgagtccggccctccacgggtcagcccgtattaaaaatgacattttt 254  Q
    ||||||||||||||||||| |||| |||||| ||||| |||||| | ||||||||||||||| ||||||||    
T  42800916 aaaacgggcttgaaatatactacctgagtccagccctacacgggccggcccgtattaaaaattacattttt 42800846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 184 - 245
Target Start/End: Original strand, 35439085 - 35439146
Alignment:
Q  184 aaaacgggcttgaaatatattacccgagtccggccctccacgggtcagcccgtattaaaaat 245  Q
    ||||||||||||||||||| |||||||| |||||||| |||||| | |||||||||||||||    
T  35439085 aaaacgggcttgaaatatactacccgagcccggccctacacgggccggcccgtattaaaaat 35439146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 136 - 227
Target Start/End: Complemental strand, 13312153 - 13312061
Alignment:
Q  136 cctaacggacttcaggctttatcagaccgagccaaaaaattaggttgaaaaa-cgggcttgaaatatattacccgagtccggccctccacggg 227  Q
    |||||||| |||||||||||||| | ||| ||||||||    |||||||||| ||||||||||||||| |||||||| |||||||| ||||||    
T  13312153 cctaacgggcttcaggctttatcgggccgggccaaaaagcccggttgaaaaaacgggcttgaaatatactacccgagcccggccctacacggg 13312061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 184 - 245
Target Start/End: Original strand, 1345824 - 1345885
Alignment:
Q  184 aaaacgggcttgaaatatattacccgagtccggccctccacgggtcagcccgtattaaaaat 245  Q
    ||||||||||||||||||| |||||||| |||||||| ||||||   |||||||||||||||    
T  1345824 aaaacgggcttgaaatatactacccgagcccggccctacacgggctggcccgtattaaaaat 1345885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 94 - 227
Target Start/End: Complemental strand, 2558285 - 2558152
Alignment:
Q  94 tagagctgtcaaaatgggcggcggggaccgtttaggggcggtcctaacggacttcaggctttatcagaccgagccaaaaaattaggttgaaaaacgggct 193  Q
    ||||||||||||||||| |||   ||  ||||||||| ||| |||||||  |||| ||||||||| |  || ||||||||  | | ||| ||||||||||    
T  2558285 tagagctgtcaaaatggacggtccggctcgtttagggccggccctaacgagcttcgggctttatcggggcgggccaaaaagcttgattgtaaaacgggct 2558186  T
Q  194 tgaaatatattacccgagtccggccctccacggg 227  Q
    ||||||||| ||| |||| |||||||| ||||||    
T  2558185 tgaaatatactactcgagcccggccctacacggg 2558152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 121 - 226
Target Start/End: Original strand, 26983936 - 26984041
Alignment:
Q  121 ccgtttaggggcggtcctaacggacttcaggctttatcagaccgagccaaaaaattaggttgaaaaacgggcttgaaatatattacccgagtccggccct 220  Q
    |||||||||| |||  |||| || |||| ||||||||| | ||| ||||||||     |||||||||||||||||||||||| |||||||| ||||||||    
T  26983936 ccgtttagggccggctctaatgggcttcgggctttatcgggccgggccaaaaagcccagttgaaaaacgggcttgaaatataatacccgagcccggccct 26984035  T
Q  221 ccacgg 226  Q
     |||||    
T  26984036 acacgg 26984041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 136 - 225
Target Start/End: Complemental strand, 34314363 - 34314274
Alignment:
Q  136 cctaacggacttcaggctttatcagaccgagccaaaaaattaggttgaaaaacgggcttgaaatatattacccgagtccggccctccacg 225  Q
    |||||||| |||||||||||||| | ||| ||||||||    ||||| ||||||||||||||||||| |||| ||| |||||||| ||||    
T  34314363 cctaacgggcttcaggctttatcgggccgggccaaaaagcccggttggaaaacgggcttgaaatatactacctgagcccggccctacacg 34314274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 179 - 227
Target Start/End: Original strand, 12847389 - 12847437
Alignment:
Q  179 gttgaaaaacgggcttgaaatatattacccgagtccggccctccacggg 227  Q
    ||||||||||||||||||||||||||||||||| ||| |||| ||||||    
T  12847389 gttgaaaaacgggcttgaaatatattacccgagcccgaccctacacggg 12847437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 137 - 227
Target Start/End: Original strand, 10821741 - 10821832
Alignment:
Q  137 ctaacggacttcaggctttatcagaccgagccaaaaaattaggttg-aaaaacgggcttgaaatatattacccgagtccggccctccacggg 227  Q
    ||||||| |||| ||||||||| | ||| ||||||||    ||||| |||||||||||||||||||| |||||||| |||||||| ||||||    
T  10821741 ctaacgggcttcgggctttatcgggccgggccaaaaagcccggttggaaaaacgggcttgaaatatactacccgagcccggccctacacggg 10821832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 124 - 227
Target Start/End: Original strand, 18257487 - 18257590
Alignment:
Q  124 tttaggggcggtcctaacggacttcaggctttatcagaccgagccaaaaaattaggttgaaaaacgggcttgaaatatattacccgagtccggccctcca 223  Q
    ||||||| ||| |||||||| |||| ||||||| | | |||  |||||||  | |||||||||| |||||||||||||| |||| ||| |||||||| ||    
T  18257487 tttagggtcgggcctaacgggcttcgggctttagcgggccggaccaaaaagctcggttgaaaaatgggcttgaaatatactacctgagcccggccctaca 18257586  T
Q  224 cggg 227  Q
    ||||    
T  18257587 cggg 18257590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 178 - 245
Target Start/End: Complemental strand, 23334617 - 23334550
Alignment:
Q  178 ggttgaaaaacgggcttgaaatatattacccgagtccggccctccacgggtcagcccgtattaaaaat 245  Q
    |||||||||| |||||||||||||| |||  ||| |||||||| |||||| | |||||||||||||||    
T  23334617 ggttgaaaaatgggcttgaaatatactacatgagcccggccctacacgggccggcccgtattaaaaat 23334550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 184 - 227
Target Start/End: Complemental strand, 31743457 - 31743414
Alignment:
Q  184 aaaacgggcttgaaatatattacccgagtccggccctccacggg 227  Q
    ||||||||||||||||||| ||||||||||||||||| ||||||    
T  31743457 aaaacgggcttgaaatatactacccgagtccggccctacacggg 31743414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 178 - 227
Target Start/End: Original strand, 25868455 - 25868504
Alignment:
Q  178 ggttgaaaaacgggcttgaaatatattacccgagtccggccctccacggg 227  Q
    ||||||||||| ||||||||||||| |||||||| |||||||| ||||||    
T  25868455 ggttgaaaaacaggcttgaaatatactacccgagcccggccctacacggg 25868504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 178 - 227
Target Start/End: Original strand, 36240290 - 36240339
Alignment:
Q  178 ggttgaaaaacgggcttgaaatatattacccgagtccggccctccacggg 227  Q
    |||||||||| |||||||||||||| |||||||| |||||||| ||||||    
T  36240290 ggttgaaaaatgggcttgaaatatactacccgagcccggccctacacggg 36240339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 227
Target Start/End: Original strand, 31617555 - 31617647
Alignment:
Q  136 cctaacggacttcaggctttatcagaccgagccaaaaaattaggttgaaaa-acgggcttgaaatatattacccgagtccggccctccacggg 227  Q
    |||||||| |||| ||||||||  ||||| ||||||||    ||||||||| |||||||||||||||| |||||||| || ||||| ||||||    
T  31617555 cctaacgggcttcgggctttattggaccgggccaaaaagcccggttgaaaaaacgggcttgaaatatactacccgagcccagccctacacggg 31617647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 184 - 227
Target Start/End: Complemental strand, 10261831 - 10261788
Alignment:
Q  184 aaaacgggcttgaaatatattacccgagtccggccctccacggg 227  Q
    ||||||||||||||||||| |||||||| |||||||| ||||||    
T  10261831 aaaacgggcttgaaatatactacccgagcccggccctacacggg 10261788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 184 - 227
Target Start/End: Complemental strand, 13248285 - 13248242
Alignment:
Q  184 aaaacgggcttgaaatatattacccgagtccggccctccacggg 227  Q
    ||||||||||||||||||| |||||||| |||||||| ||||||    
T  13248285 aaaacgggcttgaaatatactacccgagcccggccctacacggg 13248242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 184 - 227
Target Start/End: Complemental strand, 27496460 - 27496417
Alignment:
Q  184 aaaacgggcttgaaatatattacccgagtccggccctccacggg 227  Q
    ||||||||||||||||||| |||||||| |||||||| ||||||    
T  27496460 aaaacgggcttgaaatatactacccgagcccggccctacacggg 27496417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 184 - 227
Target Start/End: Original strand, 30015763 - 30015806
Alignment:
Q  184 aaaacgggcttgaaatatattacccgagtccggccctccacggg 227  Q
    ||||||||||||||||||| |||||||| |||||||| ||||||    
T  30015763 aaaacgggcttgaaatatactacccgagcccggccctacacggg 30015806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 227
Target Start/End: Original strand, 1002029 - 1002078
Alignment:
Q  178 ggttgaaaaacgggcttgaaatatattacccgagtccggccctccacggg 227  Q
    |||||||||||||| | |||||||| ||| ||||||||||||| ||||||    
T  1002029 ggttgaaaaacgggttagaaatatactactcgagtccggccctacacggg 1002078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 201
Target Start/End: Original strand, 12016972 - 12017049
Alignment:
Q  124 tttaggggcggtcctaacggacttcaggctttatcagaccgagccaaaaaattaggttgaaaaacgggcttgaaatat 201  Q
    ||||||| ||| | |||||| |||| | ||||||| | |||||||||||||   ||||||||||| ||||||||||||    
T  12016972 tttagggccggccttaacgggcttcggactttatcgggccgagccaaaaaacccggttgaaaaacaggcttgaaatat 12017049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 227
Target Start/End: Complemental strand, 28223580 - 28223447
Alignment:
Q  94 tagagctgtcaaaatgggcggcggggaccgtttaggggcggtcctaacggacttcaggctttatcagaccgagccaaaaaattaggttgaaaaacgggct 193  Q
    |||||||||||||| ||||||   || |||||||| | | | |||||||| |||| ||||||| | |  || ||||||||  | | |||||||| || ||    
T  28223580 tagagctgtcaaaacgggcggtccggcccgtttagagccagacctaacgggcttcgggctttagcgggtcgggccaaaaagctcgattgaaaaaaggact 28223481  T
Q  194 tgaaatatattacccgagtccggccctccacggg 227  Q
    ||||||||| |||||||| |||||| | ||||||    
T  28223480 tgaaatatactacccgagcccggccgtacacggg 28223447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 227
Target Start/End: Original strand, 9438809 - 9438853
Alignment:
Q  183 aaaaacgggcttgaaatatattacccgagtccggccctccacggg 227  Q
    ||||| |||||||||||||| |||||||| |||||||| ||||||    
T  9438809 aaaaaagggcttgaaatatactacccgagcccggccctacacggg 9438853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 227
Target Start/End: Complemental strand, 27553994 - 27553950
Alignment:
Q  183 aaaaacgggcttgaaatatattacccgagtccggccctccacggg 227  Q
    |||||||||||||||||||| ||||| || |||||||| ||||||    
T  27553994 aaaaacgggcttgaaatatactacccaagcccggccctacacggg 27553950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 3e-17; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 97 - 206
Target Start/End: Complemental strand, 2292721 - 2292612
Alignment:
Q  97 agctgtcaaaatgggcggcggggaccgtttaggggcggtcctaacggacttcaggctttatcagaccgagccaaaaaattaggttgaaaaacgggcttga 196  Q
    ||||||||||| |||||||  || | |||||||| |||  ||||||| |||| ||||||||||  ||||||||||||  | |||||||||||||| ||||    
T  2292721 agctgtcaaaacgggcggcccggtctgtttagggccgggtctaacgggcttcgggctttatcaagccgagccaaaaagcttggttgaaaaacgggtttga 2292622  T
Q  197 aatatattac 206  Q
    ||||||||||    
T  2292621 aatatattac 2292612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 178 - 245
Target Start/End: Original strand, 15156221 - 15156288
Alignment:
Q  178 ggttgaaaaacgggcttgaaatatattacccgagtccggccctccacgggtcagcccgtattaaaaat 245  Q
    ||||||||| ||||||||||||||| |||||||| |||||||| |||||| | |||||||||||||||    
T  15156221 ggttgaaaagcgggcttgaaatatactacccgagcccggccctacacgggccggcccgtattaaaaat 15156288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 178 - 254
Target Start/End: Complemental strand, 26484208 - 26484132
Alignment:
Q  178 ggttgaaaaacgggcttgaaatatattacccgagtccggccctccacgggtcagcccgtattaaaaatgacattttt 254  Q
    ||||||||||||| ||||||||||| || || ||||||||||| |||||| | ||||||||||||||| | ||||||    
T  26484208 ggttgaaaaacggacttgaaatatactatccaagtccggccctacacgggccggcccgtattaaaaattatattttt 26484132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 184 - 227
Target Start/End: Original strand, 31510768 - 31510811
Alignment:
Q  184 aaaacgggcttgaaatatattacccgagtccggccctccacggg 227  Q
    ||||||||||||||||||| ||||||||||||||||| ||||||    
T  31510768 aaaacgggcttgaaatatactacccgagtccggccctacacggg 31510811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 254
Target Start/End: Original strand, 9034647 - 9034717
Alignment:
Q  184 aaaacgggcttgaaatatattacccgagtccggccctccacgggtcagcccgtattaaaaatgacattttt 254  Q
    ||||||||||||||||||| |||||||| ||||||||  ||||| | | ||||||||||||| | ||||||    
T  9034647 aaaacgggcttgaaatatactacccgagcccggccctaaacgggccggtccgtattaaaaattatattttt 9034717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 97 - 227
Target Start/End: Original strand, 15183215 - 15183344
Alignment:
Q  97 agctgtcaaaatgggcggcggggaccgtttaggggcggtcctaacggacttcaggctttatcagaccgagccaaaaaattaggttgaaaaacgggcttga 196  Q
    ||||||||||| |||||||  || | |||||||| ||| |||||||| |||| ||||||| | | ||| ||||||||    ||||||||| |||||||||    
T  15183215 agctgtcaaaacgggcggcccggtctgtttagggtcgggcctaacgggcttcgggctttagcgggccg-gccaaaaagcctggttgaaaatcgggcttga 15183313  T
Q  197 aatatattacccgagtccggccctccacggg 227  Q
    ||||||  ||||||  |||||||| ||||||    
T  15183314 aatatacaacccgaacccggccctacacggg 15183344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 227
Target Start/End: Original strand, 29034007 - 29034051
Alignment:
Q  183 aaaaacgggcttgaaatatattacccgagtccggccctccacggg 227  Q
    |||||| |||||||||||||||||||||| |||||||| ||||||    
T  29034007 aaaaacaggcttgaaatatattacccgagcccggccctacacggg 29034051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 184 - 227
Target Start/End: Original strand, 2702528 - 2702571
Alignment:
Q  184 aaaacgggcttgaaatatattacccgagtccggccctccacggg 227  Q
    ||||||||||||||||||| |||||||| |||||||| ||||||    
T  2702528 aaaacgggcttgaaatatactacccgagcccggccctacacggg 2702571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 184 - 227
Target Start/End: Original strand, 4165593 - 4165636
Alignment:
Q  184 aaaacgggcttgaaatatattacccgagtccggccctccacggg 227  Q
    ||||||||||||||||||| |||||||| |||||||| ||||||    
T  4165593 aaaacgggcttgaaatatactacccgagcccggccctacacggg 4165636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 184 - 227
Target Start/End: Original strand, 29640598 - 29640641
Alignment:
Q  184 aaaacgggcttgaaatatattacccgagtccggccctccacggg 227  Q
    ||||||||||||||||||| |||||||| |||||||| ||||||    
T  29640598 aaaacgggcttgaaatatactacccgagcccggccctacacggg 29640641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 226
Target Start/End: Original strand, 22987716 - 22987758
Alignment:
Q  184 aaaacgggcttgaaatatattacccgagtccggccctccacgg 226  Q
    ||||||||||||||||||| |||||||| |||||||| |||||    
T  22987716 aaaacgggcttgaaatatactacccgagcccggccctacacgg 22987758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 226
Target Start/End: Complemental strand, 23800678 - 23800636
Alignment:
Q  184 aaaacgggcttgaaatatattacccgagtccggccctccacgg 226  Q
    ||||||||||||||||||| |||||||| |||||||| |||||    
T  23800678 aaaacgggcttgaaatatactacccgagcccggccctacacgg 23800636  T

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Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 178 - 210
Target Start/End: Original strand, 12800626 - 12800658
Alignment:
Q  178 ggttgaaaaacgggcttgaaatatattacccga 210  Q
    ||||||||||||||||||||||||| |||||||    
T  12800626 ggttgaaaaacgggcttgaaatatactacccga 12800658  T

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Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 220
Target Start/End: Complemental strand, 21036637 - 21036597
Alignment:
Q  180 ttgaaaaacgggcttgaaatatattacccgagtccggccct 220  Q
    ||||||||||| ||||||||||| |||||||| ||||||||    
T  21036637 ttgaaaaacggccttgaaatatactacccgagcccggccct 21036597  T

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Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 227
Target Start/End: Original strand, 26554707 - 26554799
Alignment:
Q  136 cctaacggacttcaggctttatcagaccgagccaaaaaattaggttga-aaaacgggcttgaaatatattacccgagtccggccctccacggg 227  Q
    |||| ||| |||| ||||||| | | ||| ||||||||  | |||||| ||||||||||||||||||| |||| ||| |||||||| ||||||    
T  26554707 cctagcgggcttcgggctttagcgggccgggccaaaaagctcggttgacaaaacgggcttgaaatatactacctgagcccggccctacacggg 26554799  T

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Target: scaffold0583 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0583
Description:

Target: scaffold0583; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 136 - 229
Target Start/End: Complemental strand, 2837 - 2744
Alignment:
Q  136 cctaacggacttcaggctttatcagaccgagccaaaaaattaggttgaaaaacgggcttgaaatatattacccgagtccggccctccacgggtc 229  Q
    ||||| ||||||||||||||| | ||  |||||||||| |  ||||| ||||||||||||||||||| || ||||||||| |||| ||||||||    
T  2837 cctaaaggacttcaggctttagcggattgagccaaaaattctggttggaaaacgggcttgaaatatagtatccgagtccgaccctacacgggtc 2744  T

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Target: scaffold0003 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 130 - 201
Target Start/End: Original strand, 157092 - 157163
Alignment:
Q  130 ggcggtcctaacggacttcaggctttatcagaccgagccaaaaaattaggttgaaaaacgggcttgaaatat 201  Q
    ||||||||||||||| |||||||||||||  |||| ||||||||    ||||||||||||||||||||||||    
T  157092 ggcggtcctaacggaattcaggctttatcgaaccgggccaaaaagcctggttgaaaaacgggcttgaaatat 157163  T

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Target: scaffold0003; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 133 - 211
Target Start/End: Complemental strand, 156615 - 156537
Alignment:
Q  133 ggtcctaacggacttcaggctttatcagaccgagccaaaaaattaggttgaaaaacgggcttgaaatatattacccgag 211  Q
    |||| |||||||||||||||||||||  |||| |||||||  |  |||||||||| |||||||||||||| || |||||    
T  156615 ggtcttaacggacttcaggctttatcgaaccgggccaaaatgtccggttgaaaaaagggcttgaaatatactatccgag 156537  T

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Target: scaffold0173 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 136 - 245
Target Start/End: Original strand, 26164 - 26274
Alignment:
Q  136 cctaacggacttcaggctttatcagaccgagccaaaaaattaggttga-aaaacgggcttgaaatatattacccgagtccggccctccacgggtcagccc 234  Q
    |||| ||| |||| ||||||| | ||||| ||||||||    |||||| ||||||| ||||||||||| ||||||||||||||||| || ||| | ||||    
T  26164 cctagcgggcttcgggctttagcggaccgggccaaaaagcccggttgacaaaacggacttgaaatatactacccgagtccggccctacatgggccggccc 26263  T
Q  235 gtattaaaaat 245  Q
    |||||||||||    
T  26264 gtattaaaaat 26274  T

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Target: scaffold0019 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 178 - 227
Target Start/End: Original strand, 74415 - 74464
Alignment:
Q  178 ggttgaaaaacgggcttgaaatatattacccgagtccggccctccacggg 227  Q
    ||||||||||||||||||||||||| |||||||| |||||||| ||||||    
T  74415 ggttgaaaaacgggcttgaaatatactacccgagcccggccctacacggg 74464  T

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Target: scaffold0041 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 92 - 208
Target Start/End: Complemental strand, 51856 - 51740
Alignment:
Q  92 tctagagctgtcaaaatgggcggcggggaccgtttaggggcggtcctaacggacttcaggctttatcagaccgagccaaaaaattaggttgaaaaacggg 191  Q
    |||||||||||||||| |||||||  |  |||||||||| ||| |||||||| |||| ||||||||| | | | |||||||| |  |||||||||| | |    
T  51856 tctagagctgtcaaaacgggcggcccgacccgtttagggccggccctaacgggcttcgggctttatcgggcagggccaaaaagtccggttgaaaaatgag 51757  T
Q  192 cttgaaatatattaccc 208  Q
    ||| ||||||| |||||    
T  51756 cttaaaatatactaccc 51740  T

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Target: scaffold0121 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 220
Target Start/End: Complemental strand, 11732 - 11690
Alignment:
Q  178 ggttgaaaaacgggcttgaaatatattacccgagtccggccct 220  Q
    |||||||||||| |||||||||||| |||||||||||||||||    
T  11732 ggttgaaaaacgagcttgaaatatactacccgagtccggccct 11690  T

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Target: scaffold0486 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0486
Description:

Target: scaffold0486; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 184 - 227
Target Start/End: Complemental strand, 142 - 99
Alignment:
Q  184 aaaacgggcttgaaatatattacccgagtccggccctccacggg 227  Q
    ||||||||||||||||||| |||||||| |||||||| ||||||    
T  142 aaaacgggcttgaaatatactacccgagcccggccctacacggg 99  T

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Target: scaffold0295 (Bit Score: 32; Significance: 0.000000006; HSPs: 2)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 130 - 201
Target Start/End: Original strand, 11865 - 11936
Alignment:
Q  130 ggcggtcctaacggacttcaggctttatcagaccgagccaaaaaattaggttgaaaaacgggcttgaaatat 201  Q
    ||||||||||| |||||||||| ||||||  |||| ||||||||    ||||| ||||||||||||||||||    
T  11865 ggcggtcctaatggacttcaggttttatcgaaccgggccaaaaagcccggttggaaaacgggcttgaaatat 11936  T

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Target: scaffold0295; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 130 - 158
Target Start/End: Complemental strand, 11313 - 11285
Alignment:
Q  130 ggcggtcctaacggacttcaggctttatc 158  Q
    |||||||||||||||||||||||||||||    
T  11313 ggcggtcctaacggacttcaggctttatc 11285  T

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Target: scaffold0007 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 220
Target Start/End: Original strand, 231222 - 231264
Alignment:
Q  178 ggttgaaaaacgggcttgaaatatattacccgagtccggccct 220  Q
    ||||||||||||||||||||||||| |||| ||| ||||||||    
T  231222 ggttgaaaaacgggcttgaaatatactacctgagcccggccct 231264  T

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Target: scaffold0007; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 179 - 227
Target Start/End: Complemental strand, 56815 - 56767
Alignment:
Q  179 gttgaaaaacgggcttgaaatatattacccgagtccggccctccacggg 227  Q
    ||||||||| |||||||||||||| ||||||||  ||||||| ||||||    
T  56815 gttgaaaaaggggcttgaaatatactacccgagctcggccctacacggg 56767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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