View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3425_low_51 (Length: 265)
Name: NF3425_low_51
Description: NF3425
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3425_low_51 |
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Alignment Details
Target: chr1 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 249
Target Start/End: Original strand, 4870366 - 4870620
Alignment:
| Q |
1 |
catatatatcttccaatgcaaaata---tatactctacttcaacaatcacgggtgtggtcttcaatgttgtgcaacactcccataagataacatcgactt |
97 |
Q |
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| T |
4870366 |
catatatatcttccaatgcaaaatagtatatactctacttcaacaatcatgggtgtggtcttcaatgttgtgcaacactcccataagataacatcgactt |
4870465 |
T |
|
| Q |
98 |
attcaatcgtaaataagtaagtattccaatattttgatattaaatttatagagatgtttattatgttactaattttaaaacatttgtttggatggtctgg |
197 |
Q |
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||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4870466 |
attcaatcgtaaataaggaagtattccaatatattgatattaaatttatagagatgtttattatgttactaattttaaaacatttgtttggatggtctgg |
4870565 |
T |
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| Q |
198 |
aactggaatgacacacaccgaaacccatcaac---aataacctcatttcatatcg |
249 |
Q |
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|||||||||||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
4870566 |
aactggaatgacacacaccgaaacccatcaacaataataacctcatttcatatcg |
4870620 |
T |
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