View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3425_low_62 (Length: 249)

Name: NF3425_low_62
Description: NF3425
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3425_low_62
NF3425_low_62
[»] chr8 (32 HSPs)
chr8 (1-239)||(27562947-27563197)
chr8 (44-103)||(7603406-7603465)
chr8 (44-103)||(45253849-45253908)
chr8 (1-173)||(1226518-1226708)
chr8 (44-103)||(12893631-12893690)
chr8 (44-90)||(20167692-20167738)
chr8 (44-103)||(761649-761711)
chr8 (44-103)||(44123773-44123832)
chr8 (48-90)||(1580880-1580922)
chr8 (51-105)||(2732683-2732737)
chr8 (48-90)||(2986429-2986471)
chr8 (48-90)||(6470949-6470991)
chr8 (48-90)||(8350995-8351037)
chr8 (48-90)||(13138247-13138289)
chr8 (44-90)||(23764564-23764610)
chr8 (44-90)||(23849730-23849776)
chr8 (48-90)||(29791046-29791088)
chr8 (44-101)||(38036758-38036818)
chr8 (44-102)||(42948355-42948413)
chr8 (48-90)||(43066230-43066272)
chr8 (44-103)||(5777454-5777516)
chr8 (45-85)||(11538810-11538850)
chr8 (44-103)||(15870274-15870336)
chr8 (44-103)||(21132828-21132890)
chr8 (44-103)||(23437713-23437775)
chr8 (44-103)||(25009243-25009305)
chr8 (48-103)||(25118885-25118943)
chr8 (44-103)||(30464531-30464593)
chr8 (48-103)||(39361229-39361287)
chr8 (48-96)||(41898655-41898703)
chr8 (44-103)||(42785998-42786060)
chr8 (44-103)||(44717394-44717456)
[»] chr4 (49 HSPs)
chr4 (44-188)||(30733837-30733984)
chr4 (101-179)||(42862265-42862344)
chr4 (44-103)||(13203238-13203297)
chr4 (44-103)||(19731268-19731327)
chr4 (44-103)||(55014362-55014421)
chr4 (48-103)||(4209466-4209521)
chr4 (44-91)||(53568454-53568501)
chr4 (44-103)||(55291171-55291230)
chr4 (47-104)||(9965504-9965561)
chr4 (48-101)||(30868872-30868925)
chr4 (44-103)||(55997214-55997273)
chr4 (44-90)||(19170654-19170700)
chr4 (44-90)||(26659939-26659985)
chr4 (44-90)||(45064382-45064428)
chr4 (44-103)||(1981283-1981345)
chr4 (48-103)||(6829379-6829437)
chr4 (44-103)||(28988296-28988358)
chr4 (44-103)||(39195589-39195651)
chr4 (44-103)||(39332732-39332794)
chr4 (44-103)||(10304885-10304944)
chr4 (48-95)||(10550534-10550581)
chr4 (103-173)||(19533998-19534069)
chr4 (44-103)||(50035639-50035698)
chr4 (48-90)||(3443502-3443544)
chr4 (44-102)||(5390326-5390384)
chr4 (48-90)||(7738934-7738976)
chr4 (44-101)||(11260803-11260863)
chr4 (48-90)||(19533927-19533969)
chr4 (44-90)||(23603762-23603808)
chr4 (44-90)||(39194012-39194058)
chr4 (48-90)||(39786472-39786514)
chr4 (48-90)||(42187094-42187136)
chr4 (48-90)||(50971563-50971605)
chr4 (44-85)||(1615659-1615700)
chr4 (44-85)||(2806073-2806114)
chr4 (45-90)||(19652371-19652416)
chr4 (46-102)||(51736896-51736955)
chr4 (48-103)||(18881263-18881321)
chr4 (46-90)||(19633964-19634008)
chr4 (44-103)||(27976669-27976731)
chr4 (45-85)||(28898974-28899014)
chr4 (44-103)||(28914467-28914529)
chr4 (44-103)||(31152760-31152822)
chr4 (48-96)||(31796991-31797039)
chr4 (44-103)||(43047486-43047548)
chr4 (44-103)||(43447264-43447326)
chr4 (45-85)||(44210269-44210309)
chr4 (44-103)||(46608312-46608374)
chr4 (44-103)||(55631777-55631839)
[»] chr5 (51 HSPs)
chr5 (44-180)||(41625241-41625391)
chr5 (101-180)||(34278745-34278825)
chr5 (44-105)||(6175032-6175093)
chr5 (44-96)||(32300670-32300722)
chr5 (44-103)||(24520308-24520367)
chr5 (44-90)||(1830755-1830801)
chr5 (44-105)||(27674597-27674661)
chr5 (44-90)||(37843690-37843736)
chr5 (44-90)||(40316222-40316268)
chr5 (44-90)||(41411272-41411318)
chr5 (44-105)||(6500233-6500293)
chr5 (44-103)||(1918733-1918795)
chr5 (44-103)||(2864054-2864116)
chr5 (44-103)||(14607460-14607522)
chr5 (44-88)||(19868803-19868847)
chr5 (44-103)||(20040318-20040380)
chr5 (44-103)||(25773163-25773225)
chr5 (44-103)||(3135466-3135525)
chr5 (48-103)||(21213760-21213815)
chr5 (101-179)||(26440630-26440709)
chr5 (48-90)||(4924953-4924995)
chr5 (48-90)||(5213037-5213079)
chr5 (44-90)||(14475345-14475391)
chr5 (44-90)||(19889753-19889799)
chr5 (48-90)||(35290390-35290432)
chr5 (48-90)||(39036514-39036556)
chr5 (44-101)||(41410849-41410909)
chr5 (44-85)||(26802004-26802045)
chr5 (44-85)||(26809554-26809595)
chr5 (44-85)||(26824581-26824622)
chr5 (48-89)||(27477645-27477686)
chr5 (44-103)||(970238-970300)
chr5 (44-103)||(1098274-1098336)
chr5 (44-103)||(1781048-1781110)
chr5 (48-103)||(1831450-1831508)
chr5 (44-103)||(9936791-9936853)
chr5 (44-103)||(13548312-13548374)
chr5 (44-103)||(14057807-14057869)
chr5 (44-103)||(14633106-14633168)
chr5 (48-103)||(18479969-18480027)
chr5 (44-103)||(19344602-19344664)
chr5 (45-85)||(27675660-27675700)
chr5 (44-103)||(28143027-28143089)
chr5 (44-103)||(30721588-30721650)
chr5 (44-103)||(31191080-31191142)
chr5 (44-103)||(34347570-34347632)
chr5 (48-103)||(39894885-39894943)
chr5 (44-103)||(40080080-40080142)
chr5 (48-103)||(40316917-40316975)
chr5 (44-103)||(41263032-41263094)
chr5 (48-103)||(41410566-41410624)
[»] chr2 (44 HSPs)
chr2 (44-103)||(5030383-5030442)
chr2 (3-105)||(24853346-24853450)
chr2 (44-103)||(332377-332436)
chr2 (44-102)||(19192761-19192819)
chr2 (44-90)||(33740679-33740725)
chr2 (101-188)||(33740563-33740652)
chr2 (48-103)||(25762293-25762351)
chr2 (44-103)||(32776002-32776061)
chr2 (44-90)||(38963619-38963665)
chr2 (44-90)||(39418135-39418181)
chr2 (101-173)||(45001859-45001932)
chr2 (44-103)||(4137508-4137570)
chr2 (44-103)||(5861467-5861529)
chr2 (1-105)||(13398856-13398960)
chr2 (48-103)||(25766543-25766601)
chr2 (101-172)||(31975508-31975580)
chr2 (44-84)||(32543296-32543336)
chr2 (45-103)||(6730006-6730067)
chr2 (48-103)||(23873181-23873236)
chr2 (48-103)||(39997062-39997117)
chr2 (45-103)||(41575661-41575722)
chr2 (48-90)||(4045348-4045390)
chr2 (48-90)||(4045954-4045996)
chr2 (48-90)||(7443006-7443048)
chr2 (44-90)||(27668073-27668119)
chr2 (48-90)||(30708832-30708874)
chr2 (48-90)||(30776308-30776350)
chr2 (44-90)||(42951440-42951486)
chr2 (44-103)||(5096347-5096409)
chr2 (44-103)||(7724513-7724575)
chr2 (44-103)||(8373533-8373595)
chr2 (48-103)||(9877182-9877240)
chr2 (44-103)||(12209088-12209150)
chr2 (44-103)||(15177468-15177530)
chr2 (48-103)||(15770988-15771046)
chr2 (48-103)||(23671480-23671538)
chr2 (122-178)||(24853259-24853315)
chr2 (56-103)||(36931711-36931761)
chr2 (44-103)||(37987838-37987900)
chr2 (44-103)||(38963894-38963956)
chr2 (44-103)||(41319826-41319888)
chr2 (44-103)||(41436931-41436993)
chr2 (48-103)||(42038627-42038685)
chr2 (44-103)||(45036462-45036524)
[»] chr3 (52 HSPs)
chr3 (3-98)||(9281319-9281415)
chr3 (45-104)||(23369133-23369192)
chr3 (44-103)||(935130-935189)
chr3 (1-91)||(4016579-4016670)
chr3 (44-101)||(50029277-50029334)
chr3 (44-104)||(39557481-39557541)
chr3 (44-103)||(18971452-18971511)
chr3 (48-103)||(37166581-37166636)
chr3 (44-90)||(3547536-3547582)
chr3 (44-105)||(40415019-40415083)
chr3 (44-103)||(43394457-43394518)
chr3 (44-103)||(4464980-4465042)
chr3 (103-179)||(28389248-28389324)
chr3 (44-103)||(29720494-29720556)
chr3 (44-103)||(33462804-33462866)
chr3 (44-103)||(34669707-34669769)
chr3 (100-172)||(43382731-43382803)
chr3 (44-103)||(46866442-46866504)
chr3 (44-95)||(9145602-9145653)
chr3 (48-103)||(20548999-20549054)
chr3 (44-102)||(4238723-4238781)
chr3 (44-90)||(7671428-7671474)
chr3 (44-90)||(15503123-15503169)
chr3 (44-90)||(17052964-17053010)
chr3 (48-90)||(27849055-27849097)
chr3 (48-90)||(28562249-28562291)
chr3 (44-90)||(28690616-28690662)
chr3 (48-90)||(29728213-29728255)
chr3 (44-90)||(35717970-35718016)
chr3 (48-90)||(38492155-38492197)
chr3 (44-85)||(10228627-10228668)
chr3 (44-103)||(14750958-14751021)
chr3 (44-85)||(43170094-43170135)
chr3 (44-89)||(50888461-50888506)
chr3 (44-103)||(900986-901048)
chr3 (44-103)||(2643167-2643229)
chr3 (44-103)||(9484695-9484757)
chr3 (44-103)||(10819341-10819403)
chr3 (44-103)||(16434755-16434817)
chr3 (44-103)||(20080995-20081057)
chr3 (48-103)||(25097286-25097344)
chr3 (44-103)||(29455606-29455668)
chr3 (44-103)||(29793276-29793338)
chr3 (44-103)||(32951235-32951297)
chr3 (44-103)||(34263602-34263664)
chr3 (44-103)||(34555250-34555312)
chr3 (44-103)||(36179034-36179096)
chr3 (44-103)||(49057956-49058018)
chr3 (44-103)||(49076324-49076386)
chr3 (45-85)||(49818877-49818917)
chr3 (44-103)||(50673776-50673838)
chr3 (48-103)||(54684570-54684628)
[»] chr1 (46 HSPs)
chr1 (5-98)||(43891506-43891598)
chr1 (44-103)||(32968212-32968271)
chr1 (44-105)||(40711006-40711067)
chr1 (44-103)||(26441737-26441796)
chr1 (44-103)||(31971486-31971548)
chr1 (44-95)||(52163558-52163609)
chr1 (44-90)||(38738093-38738139)
chr1 (48-90)||(41501722-41501764)
chr1 (44-89)||(37515437-37515482)
chr1 (47-87)||(3143284-3143324)
chr1 (44-117)||(3138676-3138753)
chr1 (44-87)||(16751571-16751614)
chr1 (44-104)||(26345311-26345373)
chr1 (44-90)||(3529276-3529322)
chr1 (44-90)||(14075834-14075880)
chr1 (44-109)||(22328062-22328130)
chr1 (44-86)||(23340890-23340932)
chr1 (44-90)||(23569789-23569835)
chr1 (48-90)||(25531882-25531924)
chr1 (48-90)||(30529165-30529207)
chr1 (101-178)||(32834802-32834879)
chr1 (48-90)||(37281196-37281238)
chr1 (48-90)||(45234960-45235002)
chr1 (50-103)||(5111048-5111101)
chr1 (44-85)||(47912401-47912442)
chr1 (44-100)||(3088901-3088957)
chr1 (44-103)||(4489160-4489222)
chr1 (44-103)||(5606298-5606360)
chr1 (44-103)||(5945864-5945926)
chr1 (44-103)||(6017356-6017418)
chr1 (44-103)||(7075237-7075299)
chr1 (44-103)||(10100420-10100482)
chr1 (44-103)||(10648105-10648167)
chr1 (44-88)||(13971665-13971709)
chr1 (44-103)||(23393331-23393393)
chr1 (54-90)||(26262032-26262068)
chr1 (48-103)||(27462837-27462895)
chr1 (44-103)||(31932085-31932147)
chr1 (48-88)||(32565850-32565890)
chr1 (48-92)||(32834904-32834948)
chr1 (143-190)||(43891399-43891447)
chr1 (44-103)||(44741442-44741504)
chr1 (44-103)||(50295843-50295905)
chr1 (44-103)||(51924877-51924939)
chr1 (44-103)||(52688630-52688692)
chr1 (44-103)||(52749380-52749442)
[»] scaffold0687 (1 HSPs)
scaffold0687 (44-103)||(1088-1147)
[»] chr6 (29 HSPs)
chr6 (44-103)||(17417624-17417683)
chr6 (44-103)||(6142414-6142476)
chr6 (3-90)||(26210862-26210950)
chr6 (44-90)||(13207068-13207114)
chr6 (44-90)||(33121642-33121688)
chr6 (44-103)||(995662-995724)
chr6 (44-103)||(10105910-10105972)
chr6 (44-103)||(32541384-32541446)
chr6 (44-103)||(12869324-12869383)
chr6 (48-90)||(643546-643588)
chr6 (48-90)||(18992007-18992049)
chr6 (44-86)||(18998587-18998629)
chr6 (106-171)||(26210764-26210830)
chr6 (44-89)||(17179306-17179350)
chr6 (101-173)||(26240770-26240843)
chr6 (44-103)||(2141667-2141729)
chr6 (44-103)||(2397869-2397931)
chr6 (44-103)||(2656577-2656639)
chr6 (44-103)||(2667232-2667294)
chr6 (114-190)||(7631939-7632015)
chr6 (44-103)||(9022939-9023001)
chr6 (44-96)||(11973452-11973504)
chr6 (44-103)||(24825264-24825326)
chr6 (44-103)||(28483136-28483198)
chr6 (44-103)||(29514933-29514995)
chr6 (44-103)||(29795549-29795611)
chr6 (48-88)||(30237271-30237311)
chr6 (44-103)||(30699360-30699422)
chr6 (44-103)||(32673847-32673909)
[»] chr7 (37 HSPs)
chr7 (44-103)||(33613316-33613375)
chr7 (44-103)||(38069150-38069212)
chr7 (44-103)||(47841173-47841232)
chr7 (44-90)||(18795255-18795301)
chr7 (44-90)||(44389401-44389447)
chr7 (44-90)||(46657733-46657779)
chr7 (46-103)||(40348512-40348569)
chr7 (48-103)||(7313005-7313063)
chr7 (48-103)||(23734269-23734327)
chr7 (44-103)||(28016214-28016276)
chr7 (44-103)||(35693733-35693795)
chr7 (44-103)||(38198581-38198643)
chr7 (44-103)||(3680447-3680506)
chr7 (44-103)||(4033391-4033450)
chr7 (52-95)||(5309217-5309260)
chr7 (45-103)||(19327414-19327475)
chr7 (48-103)||(28185510-28185565)
chr7 (46-103)||(5842216-5842276)
chr7 (44-90)||(26203177-26203223)
chr7 (44-90)||(29770589-29770635)
chr7 (48-90)||(31466473-31466515)
chr7 (44-90)||(31497819-31497865)
chr7 (44-90)||(42493632-42493678)
chr7 (48-90)||(42834407-42834449)
chr7 (48-90)||(47538027-47538069)
chr7 (48-90)||(48531426-48531468)
chr7 (44-85)||(25273920-25273961)
chr7 (44-103)||(9173239-9173301)
chr7 (44-103)||(19817434-19817496)
chr7 (48-103)||(21392122-21392180)
chr7 (48-103)||(27248752-27248810)
chr7 (44-103)||(29247726-29247788)
chr7 (44-103)||(30462124-30462186)
chr7 (44-103)||(31496548-31496610)
chr7 (44-103)||(35265724-35265786)
chr7 (44-103)||(38353501-38353563)
chr7 (44-103)||(40232027-40232089)
[»] scaffold0340 (1 HSPs)
scaffold0340 (56-98)||(14453-14495)
[»] scaffold0316 (1 HSPs)
scaffold0316 (44-105)||(7450-7511)
[»] scaffold0373 (1 HSPs)
scaffold0373 (48-103)||(6983-7041)
[»] scaffold0007 (2 HSPs)
scaffold0007 (48-90)||(15331-15373)
scaffold0007 (44-103)||(2195-2257)
[»] scaffold0196 (1 HSPs)
scaffold0196 (44-105)||(26330-26391)
[»] scaffold0221 (1 HSPs)
scaffold0221 (44-103)||(5475-5537)
[»] scaffold0111 (1 HSPs)
scaffold0111 (44-88)||(38477-38521)
[»] scaffold0028 (1 HSPs)
scaffold0028 (44-103)||(25240-25302)


Alignment Details
Target: chr8 (Bit Score: 126; Significance: 4e-65; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 27562947 - 27563197
Alignment:
Q  1 acaattttgaacttaaatatctttaatattctattnnnnnnnntatgaaaatttgatatttaaaaaatattcgtcgagacgaatccaacatcttatatga 100  Q
    |||||||||||||||||||||||||||||||||||        ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||     
T  27562947 acaattttgaacttaaatatctttaatattctattaaaaaaa-tatgaaaatttgatatttagaaaatattcgtcgagacgaatccaacatcttatatgc 27563045  T
Q  101 tatat-------------attagtagaaaa-tagagtcaaaacatgttatatgaacaatacatatttttaaattgggtcatttaaaaagggacg-aggga 185  Q
    |||||             |||||||||||| |||||||||  ||||||||||||||| | |||| |||||||||||||||||||||| |||||| |||||    
T  27563046 tatattttatctttatatattagtagaaaaatagagtcaa--catgttatatgaacagtgcatacttttaaattgggtcatttaaaacgggacggaggga 27563143  T
Q  186 gtatatgatacctaaatcccaataaatgataaaattaataccatgtcataacga 239  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  27563144 gtatatgatacctaaatcccaataaatgataaaattaatatcatgtcataacga 27563197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 44 - 103
Target Start/End: Complemental strand, 7603465 - 7603406
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatccaacatcttatatgatat 103  Q
    ||||||||||| ||||||  ||||||||| ||||||||||||||||||||||||||||||    
T  7603465 tatgaaaatttaatattttgaaaatattcttcgagacgaatccaacatcttatatgatat 7603406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 44 - 103
Target Start/End: Original strand, 45253849 - 45253908
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatccaacatcttatatgatat 103  Q
    ||||||||||| |||||| |||||||||| |||||||||||||||||||||| |||||||    
T  45253849 tatgaaaatttaatattttaaaaatattcatcgagacgaatccaacatcttacatgatat 45253908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 1226708 - 1226518
Alignment:
Q  1 acaattttgaacttaaatatctttaatattctattnnnnnnnntatgaaaatttgatatttaaaaaatattcgtcgagacgaatccaaca---tcttata 97  Q
    |||||||||||||||||||||||||||| |||| |        ||||||||||| |||||| ||||||||   |||||||||||||||||   |||||||    
T  1226708 acaattttgaacttaaatatctttaataatctaatagaaaaattatgaaaatttaatattttaaaaatatctatcgagacgaatccaacaacatcttata 1226609  T
Q  98 tgatat-------------atattagtagaaaa-tagag-tcaaaacatgttatatgaacaatacatatttttaaattgggtcatttaaaa 173  Q
    || |||             |||||||||||||| ||||  |||||||||||||| ||||||||| | ||||||||||||||| ||||||||    
T  1226608 tgctattttttgtttttatatattagtagaaaaatagatctcaaaacatgttatgtgaacaatatacatttttaaattgggttatttaaaa 1226518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 44 - 103
Target Start/End: Original strand, 12893631 - 12893690
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatccaacatcttatatgatat 103  Q
    ||||||||||| |||||| |||||||||| |||||||||||| ||||||||| |||||||    
T  12893631 tatgaaaatttaatattttaaaaatattcatcgagacgaatctaacatcttacatgatat 12893690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 44 - 90
Target Start/End: Complemental strand, 20167738 - 20167692
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatccaaca 90  Q
    ||||||||||| |||||| |||||||||| |||||||||||||||||    
T  20167738 tatgaaaatttaatattttaaaaatattcatcgagacgaatccaaca 20167692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 103
Target Start/End: Complemental strand, 761711 - 761649
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatc---caacatcttatatgatat 103  Q
    ||||||||||||||||||  |||||| || ||||||||||||   ||||||||||||||||||    
T  761711 tatgaaaatttgatattttgaaaatactcatcgagacgaatctaacaacatcttatatgatat 761649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 44 - 103
Target Start/End: Original strand, 44123773 - 44123832
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatccaacatcttatatgatat 103  Q
    ||||||||||| |||||| |||||||||| |  |||||||| |||||||||| |||||||    
T  44123773 tatgaaaatttaatattttaaaaatattcattaagacgaattcaacatcttacatgatat 44123832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 90
Target Start/End: Complemental strand, 1580922 - 1580880
Alignment:
Q  48 aaaatttgatatttaaaaaatattcgtcgagacgaatccaaca 90  Q
    ||||||| |||||| |||||||||| |||||||||||||||||    
T  1580922 aaaatttaatattttaaaaatattcatcgagacgaatccaaca 1580880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 105
Target Start/End: Complemental strand, 2732737 - 2732683
Alignment:
Q  51 atttgatatttaaaaaatattcgtcgagacgaatccaacatcttatatgatatat 105  Q
    ||||||||||| ||||||||| ||||| || ||| |||||||||||| |||||||    
T  2732737 atttgatattttaaaaatatttgtcgaaacaaattcaacatcttatacgatatat 2732683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 90
Target Start/End: Original strand, 2986429 - 2986471
Alignment:
Q  48 aaaatttgatatttaaaaaatattcgtcgagacgaatccaaca 90  Q
    ||||||| |||||| |||||||||| |||||||||||||||||    
T  2986429 aaaatttaatattttaaaaatattcatcgagacgaatccaaca 2986471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 90
Target Start/End: Original strand, 6470949 - 6470991
Alignment:
Q  48 aaaatttgatatttaaaaaatattcgtcgagacgaatccaaca 90  Q
    ||||||| |||||| |||||||||| |||||||||||||||||    
T  6470949 aaaatttaatattttaaaaatattcatcgagacgaatccaaca 6470991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 90
Target Start/End: Complemental strand, 8351037 - 8350995
Alignment:
Q  48 aaaatttgatatttaaaaaatattcgtcgagacgaatccaaca 90  Q
    ||||||| |||||| |||||||||| |||||||||||||||||    
T  8351037 aaaatttaatattttaaaaatattcatcgagacgaatccaaca 8350995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 90
Target Start/End: Complemental strand, 13138289 - 13138247
Alignment:
Q  48 aaaatttgatatttaaaaaatattcgtcgagacgaatccaaca 90  Q
    ||||||| |||||| |||||||||| |||||||||||||||||    
T  13138289 aaaatttaatattttaaaaatattcatcgagacgaatccaaca 13138247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 90
Target Start/End: Complemental strand, 23764610 - 23764564
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatccaaca 90  Q
    ||||||||||| |||||| |||||||||| ||||||||||| |||||    
T  23764610 tatgaaaatttaatattttaaaaatattcatcgagacgaattcaaca 23764564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 90
Target Start/End: Complemental strand, 23849776 - 23849730
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatccaaca 90  Q
    |||||||||||||||||| |||||||||  |||||| ||||||||||    
T  23849776 tatgaaaatttgatattttaaaaatatttatcgagatgaatccaaca 23849730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 90
Target Start/End: Original strand, 29791046 - 29791088
Alignment:
Q  48 aaaatttgatatttaaaaaatattcgtcgagacgaatccaaca 90  Q
    ||||||| |||||| |||||||||| |||||||||||||||||    
T  29791046 aaaatttaatattttaaaaatattcatcgagacgaatccaaca 29791088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 101
Target Start/End: Original strand, 38036758 - 38036818
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatc---caacatcttatatgat 101  Q
    ||||||||||||||||||  |||||| || ||||||||||||   ||||||||||||||||    
T  38036758 tatgaaaatttgatattttgaaaatactcatcgagacgaatctaacaacatcttatatgat 38036818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 102
Target Start/End: Complemental strand, 42948413 - 42948355
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatccaacatcttatatgata 102  Q
    ||||||||||| ||||||  ||||||||   ||||||||||||||||||| ||||||||    
T  42948413 tatgaaaatttaatattttgaaaatattaaccgagacgaatccaacatctcatatgata 42948355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 90
Target Start/End: Original strand, 43066230 - 43066272
Alignment:
Q  48 aaaatttgatatttaaaaaatattcgtcgagacgaatccaaca 90  Q
    ||||||| |||||| |||||||||| |||||||||||||||||    
T  43066230 aaaatttaatattttaaaaatattcatcgagacgaatccaaca 43066272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 103
Target Start/End: Original strand, 5777454 - 5777516
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatc---caacatcttatatgatat 103  Q
    ||||||||||||||||||  |||||| || ||||||||||||   | ||||||||||||||||    
T  5777454 tatgaaaatttgatattttgaaaatactcatcgagacgaatctaacgacatcttatatgatat 5777516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 85
Target Start/End: Complemental strand, 11538850 - 11538810
Alignment:
Q  45 atgaaaatttgatatttaaaaaatattcgtcgagacgaatc 85  Q
    |||||||||||||||||  ||||||||| ||||||||||||    
T  11538850 atgaaaatttgatattttgaaaatattcatcgagacgaatc 11538810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 103
Target Start/End: Complemental strand, 15870336 - 15870274
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatc---caacatcttatatgatat 103  Q
    ||||||||||||||||||  |||||| || ||||||||||||   | ||||||||||||||||    
T  15870336 tatgaaaatttgatattttgaaaatactcatcgagacgaatctaacgacatcttatatgatat 15870274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 103
Target Start/End: Original strand, 21132828 - 21132890
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatc---caacatcttatatgatat 103  Q
    ||||||||||||||||||  |||||| || ||||||||||||   | ||||||||||||||||    
T  21132828 tatgaaaatttgatattttgaaaatactcatcgagacgaatctaacgacatcttatatgatat 21132890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 103
Target Start/End: Original strand, 23437713 - 23437775
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatc---caacatcttatatgatat 103  Q
    ||||||||||||||||||  |||||| || ||||||||||||   | ||||||||||||||||    
T  23437713 tatgaaaatttgatattttgaaaatactcatcgagacgaatctaacgacatcttatatgatat 23437775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 103
Target Start/End: Complemental strand, 25009305 - 25009243
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatcca---acatcttatatgatat 103  Q
    ||||||||||||||||||  |||||| || |||||||||||| |   ||||||||||||||||    
T  25009305 tatgaaaatttgatattttgaaaatactcatcgagacgaatctaatgacatcttatatgatat 25009243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 103
Target Start/End: Complemental strand, 25118943 - 25118885
Alignment:
Q  48 aaaatttgatatttaaaaaatattcgtcgagacgaatcca---acatcttatatgatat 103  Q
    ||||||||||||||  ||||||||| |||||| |||||||   ||||||||||||||||    
T  25118943 aaaatttgatattttgaaaatattcatcgagatgaatccaacgacatcttatatgatat 25118885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 103
Target Start/End: Complemental strand, 30464593 - 30464531
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatc---caacatcttatatgatat 103  Q
    ||||||||||||||||||  |||||| || ||||||||||||   | ||||||||||||||||    
T  30464593 tatgaaaatttgatattttgaaaatactcatcgagacgaatctaacgacatcttatatgatat 30464531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 103
Target Start/End: Original strand, 39361229 - 39361287
Alignment:
Q  48 aaaatttgatatttaaaaaatattcgtcgagacgaatc---caacatcttatatgatat 103  Q
    ||||||| |||||| ||||||| || ||||||||||||   ||||||||||||||||||    
T  39361229 aaaatttaatattttaaaaatactcatcgagacgaatccaacaacatcttatatgatat 39361287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 96
Target Start/End: Original strand, 41898655 - 41898703
Alignment:
Q  48 aaaatttgatatttaaaaaatattcgtcgagacgaatccaacatcttat 96  Q
    ||||||||||||||||| ||||||| ||||||| ||| |||||| ||||    
T  41898655 aaaatttgatatttaaataatattcatcgagacaaattcaacatattat 41898703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 103
Target Start/End: Original strand, 42785998 - 42786060
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatc---caacatcttatatgatat 103  Q
    ||||||||||| ||||||  ||||||||  ||||||||||||   ||||||||||||||||||    
T  42785998 tatgaaaatttaatatttggaaaatattaatcgagacgaatccaacaacatcttatatgatat 42786060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 103
Target Start/End: Complemental strand, 44717456 - 44717394
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatcca---acatcttatatgatat 103  Q
    ||||||||||||||||||  ||||||||| ||||||| |||| |   ||||||||||||||||    
T  44717456 tatgaaaatttgatattttgaaaatattcatcgagacaaatctaatgacatcttatatgatat 44717394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 73; Significance: 2e-33; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 44 - 188
Target Start/End: Original strand, 30733837 - 30733984
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatccaac---atcttatatgatatatattagtag-aaaatagagtcaaaacatgttatatg 139  Q
    ||||||||||||||||||| |||| |||||| ||||||||||||||   |||||||||    ||||||||||| |||||||||||||| ||| |||||||    
T  30733837 tatgaaaatttgatatttagaaaacattcgttgagacgaatccaacaatatcttatat--cctatattagtagaaaaatagagtcaaagcatattatatg 30733934  T
Q  140 aacaatacatatttttaaattgggtcatttaaaaagggac-gagggagta 188  Q
    |||||||||||||||||||||||||| ||||||| ||||| |||||||||    
T  30733935 aacaatacatatttttaaattgggtcgtttaaaacgggacggagggagta 30733984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 101 - 179
Target Start/End: Original strand, 42862265 - 42862344
Alignment:
Q  101 tatatattagtagaaa-atagagtcaaaacatgttatatgaacaatacatatttttaaattgggtcatttaaaaagggac 179  Q
    |||||||||||||||| |||||||||||||||||  | ||||||||||| ||||||||||| |||||||||||| |||||    
T  42862265 tatatattagtagaaatatagagtcaaaacatgtattgtgaacaatacacatttttaaattaggtcatttaaaatgggac 42862344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 44 - 103
Target Start/End: Original strand, 13203238 - 13203297
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatccaacatcttatatgatat 103  Q
    |||||||||||||||||| |||||||||| || |||||||||||||||||| ||||||||    
T  13203238 tatgaaaatttgatattttaaaaatattcatcaagacgaatccaacatcttgtatgatat 13203297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 44 - 103
Target Start/End: Complemental strand, 19731327 - 19731268
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatccaacatcttatatgatat 103  Q
    ||||||||||| |||||| |||||||||| |||||||||||||||||||||| |||||||    
T  19731327 tatgaaaatttaatattttaaaaatattcatcgagacgaatccaacatcttaaatgatat 19731268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 44 - 103
Target Start/End: Original strand, 55014362 - 55014421
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatccaacatcttatatgatat 103  Q
    ||||||||||| |||||| |||||||||| ||||||||||||||| ||||||||||||||    
T  55014362 tatgaaaatttaatattttaaaaatattcatcgagacgaatccaagatcttatatgatat 55014421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 48 - 103
Target Start/End: Original strand, 4209466 - 4209521
Alignment:
Q  48 aaaatttgatatttaaaaaatattcgtcgagacgaatccaacatcttatatgatat 103  Q
    ||||||| |||||| |||||||||| |||||||||||||||||||||| |||||||    
T  4209466 aaaattttatattttaaaaatattcatcgagacgaatccaacatcttacatgatat 4209521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 44 - 91
Target Start/End: Original strand, 53568454 - 53568501
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatccaacat 91  Q
    ||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  53568454 tatgaaaatttaatatttaaaaaatattcatcgagacgaatccaacat 53568501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 44 - 103
Target Start/End: Complemental strand, 55291230 - 55291171
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatccaacatcttatatgatat 103  Q
    ||||||||||| ||||||  |||||||||||||||| |||||||||||||||||| ||||    
T  55291230 tatgaaaatttaatattttgaaaatattcgtcgagatgaatccaacatcttatataatat 55291171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 47 - 104
Target Start/End: Complemental strand, 9965561 - 9965504
Alignment:
Q  47 gaaaatttgatatttaaaaaatattcgtcgagacgaatccaacatcttatatgatata 104  Q
    |||||||| |||||| |||||||||  ||||||||||| |||||||||||||||||||    
T  9965561 gaaaatttaatattttaaaaatatttatcgagacgaattcaacatcttatatgatata 9965504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 101
Target Start/End: Complemental strand, 30868925 - 30868872
Alignment:
Q  48 aaaatttgatatttaaaaaatattcgtcgagacgaatccaacatcttatatgat 101  Q
    ||||||| |||||| |||||||||| ||||||| ||||||||||||||||||||    
T  30868925 aaaatttaatattttaaaaatattcatcgagacaaatccaacatcttatatgat 30868872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 44 - 103
Target Start/End: Original strand, 55997214 - 55997273
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatccaacatcttatatgatat 103  Q
    ||||||||||| |||||| |||||||||| |||||| |||| |||||||||| |||||||    
T  55997214 tatgaaaattttatattttaaaaatattcatcgagatgaattcaacatcttacatgatat 55997273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 44 - 90
Target Start/End: Complemental strand, 19170700 - 19170654
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatccaaca 90  Q
    ||||||||||| |||||| |||||||||| |||||||||||||||||    
T  19170700 tatgaaaatttaatattttaaaaatattcatcgagacgaatccaaca 19170654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 44 - 90
Target Start/End: Original strand, 26659939 - 26659985
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatccaaca 90  Q
    ||||||||||| |||||| |||||||||| |||||||||||||||||    
T  26659939 tatgaaaatttaatattttaaaaatattcatcgagacgaatccaaca 26659985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 44 - 90
Target Start/End: Complemental strand, 45064428 - 45064382
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatccaaca 90  Q
    |||||||||||||||||| |||||||||  |||||||||||||||||    
T  45064428 tatgaaaatttgatattttaaaaatattaatcgagacgaatccaaca 45064382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 103
Target Start/End: Original strand, 1981283 - 1981345
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatc---caacatcttatatgatat 103  Q
    ||||||||||||||||||| ||||||||  ||||||||||||   | ||||||||||||||||    
T  1981283 tatgaaaatttgatatttagaaaatatttatcgagacgaatctaacgacatcttatatgatat 1981345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 103
Target Start/End: Original strand, 6829379 - 6829437
Alignment:
Q  48 aaaatttgatatttaaaaaatattcgtcgagacgaatcca---acatcttatatgatat 103  Q
    ||||||||||||||  ||||||||| ||||||||||||||   ||||||||||||||||    
T  6829379 aaaatttgatattttgaaaatattcatcgagacgaatccaacgacatcttatatgatat 6829437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 103
Target Start/End: Original strand, 28988296 - 28988358
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatc---caacatcttatatgatat 103  Q
    ||||||| |||||||||| ||||||| || ||||||||||||   ||||||||||||||||||    
T  28988296 tatgaaattttgatattttaaaaatactcatcgagacgaatctaacaacatcttatatgatat 28988358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 103
Target Start/End: Complemental strand, 39195651 - 39195589
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatcc---aacatcttatatgatat 103  Q
    ||||||||||| ||||||  ||||||||| |||||||||||||   |||||||||||||||||    
T  39195651 tatgaaaatttaatattttgaaaatattcatcgagacgaatccaacaacatcttatatgatat 39195589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 103
Target Start/End: Original strand, 39332732 - 39332794
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatc---caacatcttatatgatat 103  Q
    ||||||||||||||||||  |||||| || ||||||||||||   ||||||||||||||||||    
T  39332732 tatgaaaatttgatattttgaaaatactcatcgagacgaatctaacaacatcttatatgatat 39332794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 44 - 103
Target Start/End: Original strand, 10304885 - 10304944
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatccaacatcttatatgatat 103  Q
    ||||||||||| ||||||  ||||||||| ||||||  ||||||||||||||||| ||||    
T  10304885 tatgaaaatttaatattttgaaaatattcatcgagaataatccaacatcttatattatat 10304944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 95
Target Start/End: Complemental strand, 10550581 - 10550534
Alignment:
Q  48 aaaatttgatatttaaaaaatattcgtcgagacgaatccaacatctta 95  Q
    |||||||||||||| |||||||||| ||||||| |||| |||||||||    
T  10550581 aaaatttgatattttaaaaatattcatcgagacaaatcaaacatctta 10550534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 103 - 173
Target Start/End: Original strand, 19533998 - 19534069
Alignment:
Q  103 tatattagtagaaaa-tagagtcaaaacatgttatatgaacaatacatatttttaaattgggtcatttaaaa 173  Q
    ||||||||||||||| ||  ||||||  |||||||||||| ||| |||||||| ||||| ||||||||||||    
T  19533998 tatattagtagaaaaatattgtcaaagtatgttatatgaataatgcatattttcaaattaggtcatttaaaa 19534069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 44 - 103
Target Start/End: Original strand, 50035639 - 50035698
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatccaacatcttatatgatat 103  Q
    ||||||||||| |||||| |||||||||| |  |||||||| |||||||||| |||||||    
T  50035639 tatgaaaatttaatattttaaaaatattcattaagacgaattcaacatcttacatgatat 50035698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 90
Target Start/End: Complemental strand, 3443544 - 3443502
Alignment:
Q  48 aaaatttgatatttaaaaaatattcgtcgagacgaatccaaca 90  Q
    ||||||| |||||| |||||||||| |||||||||||||||||    
T  3443544 aaaatttaatattttaaaaatattcatcgagacgaatccaaca 3443502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 102
Target Start/End: Complemental strand, 5390384 - 5390326
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatccaacatcttatatgata 102  Q
    ||||||||||| |||||| ||||||||||  |||||| |||| ||||| ||||||||||    
T  5390384 tatgaaaatttaatattttaaaaatattcaacgagacaaatctaacattttatatgata 5390326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 90
Target Start/End: Complemental strand, 7738976 - 7738934
Alignment:
Q  48 aaaatttgatatttaaaaaatattcgtcgagacgaatccaaca 90  Q
    ||||||| |||||| |||||||||| |||||||||||||||||    
T  7738976 aaaatttaatattttaaaaatattcatcgagacgaatccaaca 7738934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 101
Target Start/End: Complemental strand, 11260863 - 11260803
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatc---caacatcttatatgat 101  Q
    |||||||||||||||||| ||||||| || ||||||||||||   | ||||||||||||||    
T  11260863 tatgaaaatttgatattttaaaaatactcatcgagacgaatctaacgacatcttatatgat 11260803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 90
Target Start/End: Original strand, 19533927 - 19533969
Alignment:
Q  48 aaaatttgatatttaaaaaatattcgtcgagacgaatccaaca 90  Q
    |||||||||||||| |||||||||| ||||||| |||||||||    
T  19533927 aaaatttgatattttaaaaatattcatcgagacaaatccaaca 19533969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 90
Target Start/End: Complemental strand, 23603808 - 23603762
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatccaaca 90  Q
    ||||||||||| |||||| |||||||||| | |||||||||||||||    
T  23603808 tatgaaaatttaatattttaaaaatattcattgagacgaatccaaca 23603762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 90
Target Start/End: Original strand, 39194012 - 39194058
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatccaaca 90  Q
    ||||||||||| |||||| ||||||| || |||||||||||||||||    
T  39194012 tatgaaaatttaatattttaaaaatactcatcgagacgaatccaaca 39194058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 90
Target Start/End: Complemental strand, 39786514 - 39786472
Alignment:
Q  48 aaaatttgatatttaaaaaatattcgtcgagacgaatccaaca 90  Q
    ||||||| |||||| |||||||||| |||||||||||||||||    
T  39786514 aaaatttaatattttaaaaatattcatcgagacgaatccaaca 39786472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 90
Target Start/End: Complemental strand, 42187136 - 42187094
Alignment:
Q  48 aaaatttgatatttaaaaaatattcgtcgagacgaatccaaca 90  Q
    ||||||| |||||| |||||||||| |||||||||||||||||    
T  42187136 aaaatttaatattttaaaaatattcatcgagacgaatccaaca 42187094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 90
Target Start/End: Original strand, 50971563 - 50971605
Alignment:
Q  48 aaaatttgatatttaaaaaatattcgtcgagacgaatccaaca 90  Q
    ||||||| |||||| |||||||||| |||||||||||||||||    
T  50971563 aaaatttaatattttaaaaatattcatcgagacgaatccaaca 50971605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 85
Target Start/End: Complemental strand, 1615700 - 1615659
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatc 85  Q
    ||||||||||||||||||  ||||||||| ||||||||||||    
T  1615700 tatgaaaatttgatattttgaaaatattcatcgagacgaatc 1615659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 85
Target Start/End: Original strand, 2806073 - 2806114
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatc 85  Q
    ||||||||||||||||||| |||||| || ||||||||||||    
T  2806073 tatgaaaatttgatatttagaaaatactcatcgagacgaatc 2806114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 90
Target Start/End: Complemental strand, 19652416 - 19652371
Alignment:
Q  45 atgaaaatttgatatttaaaaaatattcgtcgagacgaatccaaca 90  Q
    |||||||||| |||||| |||||||||| ||||||||||| |||||    
T  19652416 atgaaaatttaatattttaaaaatattcatcgagacgaattcaaca 19652371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 46 - 102
Target Start/End: Original strand, 51736896 - 51736955
Alignment:
Q  46 tgaaaatttgatatttaaaaaatattcgtcgagacgaatc---caacatcttatatgata 102  Q
    ||||||||| |||||| |||||||||  ||||||||||||   |||||||||||||||||    
T  51736896 tgaaaatttaatattttaaaaatattattcgagacgaatctaacaacatcttatatgata 51736955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 103
Target Start/End: Original strand, 18881263 - 18881321
Alignment:
Q  48 aaaatttgatatttaaaaaatattcgtcgagacgaatcca---acatcttatatgatat 103  Q
    ||||||||||||||  ||||||||| |||||||||||| |   ||||||||||||||||    
T  18881263 aaaatttgatattttgaaaatattcatcgagacgaatctaatgacatcttatatgatat 18881321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 90
Target Start/End: Complemental strand, 19634008 - 19633964
Alignment:
Q  46 tgaaaatttgatatttaaaaaatattcgtcgagacgaatccaaca 90  Q
    ||||||||| || ||| |||||||||| |||||||||||||||||    
T  19634008 tgaaaatttaatgttttaaaaatattcatcgagacgaatccaaca 19633964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 103
Target Start/End: Complemental strand, 27976731 - 27976669
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatc---caacatcttatatgatat 103  Q
    ||||||||||| |||||| |||||||||  ||||||||||||   |||||||| |||||||||    
T  27976731 tatgaaaatttaatattttaaaaatatttatcgagacgaatcaaacaacatctaatatgatat 27976669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 85
Target Start/End: Original strand, 28898974 - 28899014
Alignment:
Q  45 atgaaaatttgatatttaaaaaatattcgtcgagacgaatc 85  Q
    |||||||||||||||||  ||||||||| ||||||||||||    
T  28898974 atgaaaatttgatattttgaaaatattcatcgagacgaatc 28899014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 103
Target Start/End: Complemental strand, 28914529 - 28914467
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatc---caacatcttatatgatat 103  Q
    ||||||||||||||||||  |||||| || ||||||||||||   | ||||||||||||||||    
T  28914529 tatgaaaatttgatattttgaaaatactcatcgagacgaatctaacgacatcttatatgatat 28914467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 103
Target Start/End: Complemental strand, 31152822 - 31152760
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatc---caacatcttatatgatat 103  Q
    ||||||||||||||||||  |||||| || ||||||||||||   | ||||||||||||||||    
T  31152822 tatgaaaatttgatattttgaaaatactcatcgagacgaatctaacgacatcttatatgatat 31152760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 96
Target Start/End: Complemental strand, 31797039 - 31796991
Alignment:
Q  48 aaaatttgatatttaaaaaatattcgtcgagacgaatccaacatcttat 96  Q
    |||| |||| ||||||||||||||  ||||||| |||||||||||||||    
T  31797039 aaaagttgaaatttaaaaaatattgatcgagacaaatccaacatcttat 31796991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 103
Target Start/End: Complemental strand, 43047548 - 43047486
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatc---caacatcttatatgatat 103  Q
    ||||||||||||||||||  |||||| || ||||||||||||   | ||||||||||||||||    
T  43047548 tatgaaaatttgatattttgaaaatactcatcgagacgaatctaacgacatcttatatgatat 43047486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 103
Target Start/End: Complemental strand, 43447326 - 43447264
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatc---caacatcttatatgatat 103  Q
    ||||||||||||||||||  |||||| || ||||||||||||   | ||||||||||||||||    
T  43447326 tatgaaaatttgatattttgaaaatactcatcgagacgaatctaacgacatcttatatgatat 43447264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 85
Target Start/End: Complemental strand, 44210309 - 44210269
Alignment:
Q  45 atgaaaatttgatatttaaaaaatattcgtcgagacgaatc 85  Q
    |||||||||||||||||  ||||||||| ||||||||||||    
T  44210309 atgaaaatttgatattttgaaaatattcatcgagacgaatc 44210269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 103
Target Start/End: Complemental strand, 46608374 - 46608312
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatc---caacatcttatatgatat 103  Q
    ||||||||||||||||||  |||||| || ||||||||||||   | ||||||||||||||||    
T  46608374 tatgaaaatttgatattttgaaaatactcatcgagacgaatctaacgacatcttatatgatat 46608312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 103
Target Start/End: Original strand, 55631777 - 55631839
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatc---caacatcttatatgatat 103  Q
    ||||||||||||||||||  |||||| || ||||||||||||   | ||||||||||||||||    
T  55631777 tatgaaaatttgatattttgaaaatactcatcgagacgaatctaacgacatcttatatgatat 55631839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 59; Significance: 4e-25; HSPs: 51)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 44 - 180
Target Start/End: Original strand, 41625241 - 41625391
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatccaacatcttatat-------------gatatatattagtag-aaaatagagtcaaaac 129  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||               ||||||||| ||| |||||||||||||| |    
T  41625241 tatgaaaatttaatatttaaaaaatattcgtcgagacgaatccaacatcttatatactatattttgtctttatatattaatagaaaaatagagtcaaagc 41625340  T
Q  130 atgttatatgaacaatacatatttttaaattgggtcatttaaaaagggacg 180  Q
     ||||| |||||||||| |||||||||||||| ||||||||||| ||||||    
T  41625341 gtgttacatgaacaatatatatttttaaattgtgtcatttaaaacgggacg 41625391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 101 - 180
Target Start/End: Original strand, 34278745 - 34278825
Alignment:
Q  101 tatatattagtagaaaa-tagagtcaaaacatgttatatgaacaatacatatttttaaattgggtcatttaaaaagggacg 180  Q
    ||||||||||||||||| ||  ||||||||||||||||||||||||||| ||||| ||||| |||||| ||||| ||||||    
T  34278745 tatatattagtagaaaaataaggtcaaaacatgttatatgaacaatacacattttaaaattaggtcatataaaatgggacg 34278825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 44 - 105
Target Start/End: Original strand, 6175032 - 6175093
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatccaacatcttatatgatatat 105  Q
    ||||||||| ||||||||||||||||||| ||||||| || ||||||||||||||| |||||    
T  6175032 tatgaaaatatgatatttaaaaaatattcatcgagacaaacccaacatcttatatgctatat 6175093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 44 - 96
Target Start/End: Original strand, 32300670 - 32300722
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatccaacatcttat 96  Q
    ||||||||||| ||||||| ||||||||  |||||||||||||||||||||||    
T  32300670 tatgaaaatttaatatttagaaaatattaatcgagacgaatccaacatcttat 32300722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 44 - 103
Target Start/End: Original strand, 24520308 - 24520367
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatccaacatcttatatgatat 103  Q
    ||||||||||| |||||| |||||||||  ||||||||||| |||||||||| |||||||    
T  24520308 tatgaaaatttaatattttaaaaatatttatcgagacgaatacaacatcttacatgatat 24520367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 44 - 90
Target Start/End: Original strand, 1830755 - 1830801
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatccaaca 90  Q
    ||||||||||| |||||| |||||||||| |||||||||||||||||    
T  1830755 tatgaaaatttaatattttaaaaatattcatcgagacgaatccaaca 1830801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 44 - 105
Target Start/End: Original strand, 27674597 - 27674661
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatc---caacatcttatatgatatat 105  Q
    ||||||||||||||||||  ||||||||  ||||||||||||   ||||||||||||||||||||    
T  27674597 tatgaaaatttgatattttcaaaatattgatcgagacgaatccaacaacatcttatatgatatat 27674661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 44 - 90
Target Start/End: Complemental strand, 37843736 - 37843690
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatccaaca 90  Q
    ||||||||||| |||||| |||||||||| |||||||||||||||||    
T  37843736 tatgaaaatttaatattttaaaaatattcatcgagacgaatccaaca 37843690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 44 - 90
Target Start/End: Original strand, 40316222 - 40316268
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatccaaca 90  Q
    ||||||||||| |||||| |||||||||| |||||||||||||||||    
T  40316222 tatgaaaatttaatattttaaaaatattcatcgagacgaatccaaca 40316268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 44 - 90
Target Start/End: Complemental strand, 41411318 - 41411272
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatccaaca 90  Q
    ||||||||||| |||||| |||||||||| |||||||||||||||||    
T  41411318 tatgaaaatttaatattttaaaaatattcatcgagacgaatccaaca 41411272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 105
Target Start/End: Complemental strand, 6500293 - 6500233
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatccaacatcttatatgatatat 105  Q
    |||||||||||||||||  |||||||||  ||||||||||| |||||||||||||| |||||    
T  6500293 tatgaaaatttgatattataaaaatatta-tcgagacgaatacaacatcttatatgctatat 6500233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 103
Target Start/End: Original strand, 1918733 - 1918795
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatcca---acatcttatatgatat 103  Q
    ||||||||||||||||||  ||||||||| |||||||||||| |   ||||||||||||||||    
T  1918733 tatgaaaatttgatattttgaaaatattcatcgagacgaatctaaagacatcttatatgatat 1918795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 103
Target Start/End: Original strand, 2864054 - 2864116
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatc---caacatcttatatgatat 103  Q
    |||||||| || |||||| |||||||||| ||||||||||||   ||||||||||||||||||    
T  2864054 tatgaaaacttaatattttaaaaatattcatcgagacgaatccaacaacatcttatatgatat 2864116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 103
Target Start/End: Original strand, 14607460 - 14607522
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatc---caacatcttatatgatat 103  Q
    |||||||||||||||||| ||||||| || ||||||||||||   | ||||||||||||||||    
T  14607460 tatgaaaatttgatattttaaaaatactcatcgagacgaatctaacgacatcttatatgatat 14607522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 88
Target Start/End: Complemental strand, 19868847 - 19868803
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatccaa 88  Q
    ||||||||||| |||||| |||||||||| |||||||||||||||    
T  19868847 tatgaaaatttaatattttaaaaatattcatcgagacgaatccaa 19868803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 103
Target Start/End: Original strand, 20040318 - 20040380
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatc---caacatcttatatgatat 103  Q
    ||||||||||||||||||  ||||||||| ||||||||||||   | ||||||||||||||||    
T  20040318 tatgaaaatttgatattttgaaaatattcatcgagacgaatctaacgacatcttatatgatat 20040380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 103
Target Start/End: Original strand, 25773163 - 25773225
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatc---caacatcttatatgatat 103  Q
    ||||||||||| | |||| |||||||||| ||||||||||||   ||||||||||||||||||    
T  25773163 tatgaaaatttaaaattttaaaaatattcttcgagacgaatctagcaacatcttatatgatat 25773225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 44 - 103
Target Start/End: Complemental strand, 3135525 - 3135466
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatccaacatcttatatgatat 103  Q
    ||||||||| | |||||| |||||||||| | |||||||| ||||||| |||||||||||    
T  3135525 tatgaaaatataatattttaaaaatattcattgagacgaacccaacattttatatgatat 3135466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 103
Target Start/End: Complemental strand, 21213815 - 21213760
Alignment:
Q  48 aaaatttgatatttaaaaaatattcgtcgagacgaatccaacatcttatatgatat 103  Q
    ||||||||||||||  |||||| || |||||||||||| |||||||||||| ||||    
T  21213815 aaaatttgatattttgaaaatactcatcgagacgaatctaacatcttatataatat 21213760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 101 - 179
Target Start/End: Original strand, 26440630 - 26440709
Alignment:
Q  101 tatatattagtagaaaa-tagagtcaaaacatgttatatgaacaatacatatttttaaattgggtcatttaaaaagggac 179  Q
    ||||||||||||||||| ||  || ||| ||||||| |||||||||||||||||| | ||| | |||||||||| |||||    
T  26440630 tatatattagtagaaaaataaggttaaagcatgttaaatgaacaatacatattttcagattagatcatttaaaatgggac 26440709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 90
Target Start/End: Complemental strand, 4924995 - 4924953
Alignment:
Q  48 aaaatttgatatttaaaaaatattcgtcgagacgaatccaaca 90  Q
    ||||||| |||||| |||||||||| |||||||||||||||||    
T  4924995 aaaatttaatattttaaaaatattcatcgagacgaatccaaca 4924953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 90
Target Start/End: Complemental strand, 5213079 - 5213037
Alignment:
Q  48 aaaatttgatatttaaaaaatattcgtcgagacgaatccaaca 90  Q
    ||||||| |||||| |||||||||| |||||||||||||||||    
T  5213079 aaaatttaatattttaaaaatattcatcgagacgaatccaaca 5213037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 90
Target Start/End: Complemental strand, 14475391 - 14475345
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatccaaca 90  Q
    ||||||||||| |||||| |||||||||| ||||||||| |||||||    
T  14475391 tatgaaaatttaatattttaaaaatattcatcgagacgattccaaca 14475345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 90
Target Start/End: Original strand, 19889753 - 19889799
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatccaaca 90  Q
    ||||||||||  |||||| |||||||||| |||||||||||||||||    
T  19889753 tatgaaaattgaatattttaaaaatattcatcgagacgaatccaaca 19889799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 90
Target Start/End: Original strand, 35290390 - 35290432
Alignment:
Q  48 aaaatttgatatttaaaaaatattcgtcgagacgaatccaaca 90  Q
    ||||||| |||||| |||||||||| |||||||||||||||||    
T  35290390 aaaatttaatattttaaaaatattcatcgagacgaatccaaca 35290432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 90
Target Start/End: Original strand, 39036514 - 39036556
Alignment:
Q  48 aaaatttgatatttaaaaaatattcgtcgagacgaatccaaca 90  Q
    ||||||| |||||| |||||||||| |||||||||||||||||    
T  39036514 aaaatttaatattttaaaaatattcatcgagacgaatccaaca 39036556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 101
Target Start/End: Original strand, 41410849 - 41410909
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatc---caacatcttatatgat 101  Q
    |||||||||||||||||| ||||||| || ||||||||||||   | ||||||||||||||    
T  41410849 tatgaaaatttgatattttaaaaatactcatcgagacgaatctaacgacatcttatatgat 41410909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 85
Target Start/End: Original strand, 26802004 - 26802045
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatc 85  Q
    ||||||||||||||||||  ||||||||| ||||||||||||    
T  26802004 tatgaaaatttgatattttgaaaatattcatcgagacgaatc 26802045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 85
Target Start/End: Original strand, 26809554 - 26809595
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatc 85  Q
    ||||||||||||||||||  ||||||||| ||||||||||||    
T  26809554 tatgaaaatttgatattttgaaaatattcatcgagacgaatc 26809595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 85
Target Start/End: Original strand, 26824581 - 26824622
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatc 85  Q
    ||||||||||||||||||  ||||||||| ||||||||||||    
T  26824581 tatgaaaatttgatattttgaaaatattcatcgagacgaatc 26824622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 48 - 89
Target Start/End: Original strand, 27477645 - 27477686
Alignment:
Q  48 aaaatttgatatttaaaaaatattcgtcgagacgaatccaac 89  Q
    ||||||| |||||| |||||||||| ||||||||||||||||    
T  27477645 aaaatttaatattttaaaaatattcatcgagacgaatccaac 27477686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 103
Target Start/End: Original strand, 970238 - 970300
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatccaac---atcttatatgatat 103  Q
    |||||||| || |||||| |||||||||| ||||||||| ||||||   ||||||||||||||    
T  970238 tatgaaaacttaatattttaaaaatattcatcgagacgattccaacaacatcttatatgatat 970300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 103
Target Start/End: Complemental strand, 1098336 - 1098274
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatc---caacatcttatatgatat 103  Q
    ||||||||||||||||||  |||||| || ||||||||||||   | ||||||||||||||||    
T  1098336 tatgaaaatttgatattttgaaaatactcatcgagacgaatctaacgacatcttatatgatat 1098274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 103
Target Start/End: Original strand, 1781048 - 1781110
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatc---caacatcttatatgatat 103  Q
    |||||||||||||||||| ||||||| || |||||||||| |   | ||||||||||||||||    
T  1781048 tatgaaaatttgatattttaaaaatactcatcgagacgaacctaacgacatcttatatgatat 1781110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 103
Target Start/End: Complemental strand, 1831508 - 1831450
Alignment:
Q  48 aaaatttgatatttaaaaaatattcgtcgagacgaatc---caacatcttatatgatat 103  Q
    ||||||||||||||  ||||||||| ||||||||||||   | ||||||||||||||||    
T  1831508 aaaatttgatattttgaaaatattcatcgagacgaatctaacgacatcttatatgatat 1831450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 103
Target Start/End: Original strand, 9936791 - 9936853
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatc---caacatcttatatgatat 103  Q
    ||||||||||||||||||  |||||| || ||||||||||||   | ||||||||||||||||    
T  9936791 tatgaaaatttgatattttgaaaatactcatcgagacgaatctaacgacatcttatatgatat 9936853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 103
Target Start/End: Complemental strand, 13548374 - 13548312
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatc---caacatcttatatgatat 103  Q
    ||||||||||||||||||  |||||| || ||||||||||||   | ||||||||||||||||    
T  13548374 tatgaaaatttgatattttgaaaatactcatcgagacgaatctaacgacatcttatatgatat 13548312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 103
Target Start/End: Complemental strand, 14057869 - 14057807
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatc---caacatcttatatgatat 103  Q
    ||||||||||||||||||  |||||| || ||||||||||||   | ||||||||||||||||    
T  14057869 tatgaaaatttgatattttgaaaatactcatcgagacgaatctaacgacatcttatatgatat 14057807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 103
Target Start/End: Complemental strand, 14633168 - 14633106
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatc---caacatcttatatgatat 103  Q
    ||||||||||||||||||  |||||| || ||||||||||||   | ||||||||||||||||    
T  14633168 tatgaaaatttgatattttgaaaatactcatcgagacgaatctaactacatcttatatgatat 14633106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 103
Target Start/End: Original strand, 18479969 - 18480027
Alignment:
Q  48 aaaatttgatatttaaaaaatattcgtcgagacgaatcca---acatcttatatgatat 103  Q
    ||||||||||||||  ||||||||| | ||||||||||||   ||||||||||||||||    
T  18479969 aaaatttgatattttgaaaatattcattgagacgaatccaacgacatcttatatgatat 18480027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 103
Target Start/End: Original strand, 19344602 - 19344664
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatc---caacatcttatatgatat 103  Q
    ||||||||||||||||||  |||||| || ||||||||||||   | ||||||||||||||||    
T  19344602 tatgaaaatttgatattttgaaaatactcatcgagacgaatctaacgacatcttatatgatat 19344664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 85
Target Start/End: Complemental strand, 27675700 - 27675660
Alignment:
Q  45 atgaaaatttgatatttaaaaaatattcgtcgagacgaatc 85  Q
    |||||||||||||||||  ||||||||| ||||||||||||    
T  27675700 atgaaaatttgatattttgaaaatattcatcgagacgaatc 27675660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 103
Target Start/End: Complemental strand, 28143089 - 28143027
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatc---caacatcttatatgatat 103  Q
    ||||||||||||||||||  |||||| || |||||||||| |   ||||||||||||||||||    
T  28143089 tatgaaaatttgatattttgaaaatactcatcgagacgaacctaacaacatcttatatgatat 28143027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 103
Target Start/End: Original strand, 30721588 - 30721650
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatc---caacatcttatatgatat 103  Q
    ||||||||||||||||||  |||||| || ||||||||||||   | ||||||||||||||||    
T  30721588 tatgaaaatttgatattttgaaaatactcatcgagacgaatctaacgacatcttatatgatat 30721650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 103
Target Start/End: Original strand, 31191080 - 31191142
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatc---caacatcttatatgatat 103  Q
    ||||||||||||||||||  |||||| || ||||||||||||   | ||||||||||||||||    
T  31191080 tatgaaaatttgatattttgaaaatactcatcgagacgaatctaacgacatcttatatgatat 31191142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 103
Target Start/End: Complemental strand, 34347632 - 34347570
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatc---caacatcttatatgatat 103  Q
    ||||||||||||||||||  |||||||||  |||||||||||   | ||||||||||||||||    
T  34347632 tatgaaaatttgatattttgaaaatattcaccgagacgaatctaacgacatcttatatgatat 34347570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 103
Target Start/End: Original strand, 39894885 - 39894943
Alignment:
Q  48 aaaatttgatatttaaaaaatattcgtcgagacgaatc---caacatcttatatgatat 103  Q
    ||||||| |||||| ||||||| || ||||||||||||   ||||||||||||||||||    
T  39894885 aaaatttaatattttaaaaatactcatcgagacgaatccaacaacatcttatatgatat 39894943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 103
Target Start/End: Complemental strand, 40080142 - 40080080
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatc---caacatcttatatgatat 103  Q
    ||||||||||||||||||  |||||| || ||||||||||||   | ||||||||||||||||    
T  40080142 tatgaaaatttgatattttgaaaatactcatcgagacgaatctcacgacatcttatatgatat 40080080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 103
Target Start/End: Complemental strand, 40316975 - 40316917
Alignment:
Q  48 aaaatttgatatttaaaaaatattcgtcgagacgaatc---caacatcttatatgatat 103  Q
    ||||||||||||||  ||||||||| ||||||||||||   | ||||||||||||||||    
T  40316975 aaaatttgatattttgaaaatattcatcgagacgaatctaacgacatcttatatgatat 40316917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 103
Target Start/End: Original strand, 41263032 - 41263094
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatc---caacatcttatatgatat 103  Q
    ||||||||||||||||||  |||||| || ||||||||||||   | ||||||||||||||||    
T  41263032 tatgaaaatttgatattttgaaaatactcatcgagacgaatctaacgacatcttatatgatat 41263094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 103
Target Start/End: Original strand, 41410566 - 41410624
Alignment:
Q  48 aaaatttgatatttaaaaaatattcgtcgagacgaatc---caacatcttatatgatat 103  Q
    ||||||||||||||  ||||||||| ||||||||||||   | ||||||||||||||||    
T  41410566 aaaatttgatattttgaaaatattcatcgagacgaatctaacgacatcttatatgatat 41410624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 48; Significance: 2e-18; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 44 - 103
Target Start/End: Complemental strand, 5030442 - 5030383
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatccaacatcttatatgatat 103  Q
    ||||||||||| |||||| |||||||||| ||||||||||||||||||||||||||||||    
T  5030442 tatgaaaatttaatattttaaaaatattcatcgagacgaatccaacatcttatatgatat 5030383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 105
Target Start/End: Complemental strand, 24853450 - 24853346
Alignment:
Q  3 aattttgaacttaaatatctttaatattctattnnnnnnnntatgaaaatttgatatttaaaaaatattcgtcgagacgaatc---caacatcttatatg 99  Q
    |||||||||||||||||||||||||||||||||        ||| ||||||||||||||  ||||||||| ||||||||||||   ||||||||||||||    
T  24853450 aattttgaacttaaatatctttaatattctatt-aaaaaattatcaaaatttgatattttgaaaatattcatcgagacgaatccagcaacatcttatatg 24853352  T
Q  100 atatat 105  Q
     |||||    
T  24853351 ctatat 24853346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 44 - 103
Target Start/End: Original strand, 332377 - 332436
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatccaacatcttatatgatat 103  Q
    ||||||||||| |||||| |||||||||| ||||| |||||||||||||||| |||||||    
T  332377 tatgaaaatttaatattttaaaaatattcatcgaggcgaatccaacatcttacatgatat 332436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 44 - 102
Target Start/End: Complemental strand, 19192819 - 19192761
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatccaacatcttatatgata 102  Q
    ||||||||||  ||||||||||||||||  ||||||||||||||||||||||| |||||    
T  19192819 tatgaaaattaaatatttaaaaaatattaatcgagacgaatccaacatcttatttgata 19192761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 44 - 90
Target Start/End: Complemental strand, 33740725 - 33740679
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatccaaca 90  Q
    ||||||| ||||||||||| |||||||||||||||||||||||||||    
T  33740725 tatgaaattttgatatttataaaatattcgtcgagacgaatccaaca 33740679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 101 - 188
Target Start/End: Complemental strand, 33740652 - 33740563
Alignment:
Q  101 tatatattagtagaaaa-tagagtcaaaacatgttatatgaacaatacatatttttaaattgggtcatttaaaaagggac-gagggagta 188  Q
    ||||||||| ||||||| |||||||||| ||||||||||||| | |||||||||| |||||| || ||||| || ||||| |||||||||    
T  33740652 tatatattaatagaaaaatagagtcaaagcatgttatatgaatagtacatattttaaaattgagttatttataacgggacggagggagta 33740563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 48 - 103
Target Start/End: Complemental strand, 25762351 - 25762293
Alignment:
Q  48 aaaatttgatatttaaaaaatattcgtcgagacgaatcca---acatcttatatgatat 103  Q
    |||||||||||||| |||||||||| ||||||||||||||   ||||||||||||||||    
T  25762351 aaaatttgatattttaaaaatattcatcgagacgaatccaatgacatcttatatgatat 25762293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 44 - 103
Target Start/End: Complemental strand, 32776061 - 32776002
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatccaacatcttatatgatat 103  Q
    ||||||||||| |||||| |||||||||| ||||||||| |||||||||||  |||||||    
T  32776061 tatgaaaatttaatattttaaaaatattcatcgagacgagtccaacatctttcatgatat 32776002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 44 - 90
Target Start/End: Original strand, 38963619 - 38963665
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatccaaca 90  Q
    ||||||||||| |||||| |||||||||| |||||||||||||||||    
T  38963619 tatgaaaatttaatattttaaaaatattcatcgagacgaatccaaca 38963665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 44 - 90
Target Start/End: Complemental strand, 39418181 - 39418135
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatccaaca 90  Q
    ||||||||||| |||||| |||||||||| |||||||||||||||||    
T  39418181 tatgaaaatttaatattttaaaaatattcatcgagacgaatccaaca 39418135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 173
Target Start/End: Original strand, 45001859 - 45001932
Alignment:
Q  101 tatatattagtagaaaa-tagagtcaaaacatgttatatgaacaatacatatttttaaattgggtcatttaaaa 173  Q
    |||||||||| |||||| ||||||||||| |||||||||||| |||||| ||||| ||| | | ||||||||||    
T  45001859 tatatattagcagaaaaatagagtcaaaatatgttatatgaataatacacattttaaaactagatcatttaaaa 45001932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 103
Target Start/End: Complemental strand, 4137570 - 4137508
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatc---caacatcttatatgatat 103  Q
    |||||||||||||||||| ||||||| || ||||||||||||   | ||||||||||||||||    
T  4137570 tatgaaaatttgatattttaaaaatactcatcgagacgaatctaacgacatcttatatgatat 4137508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 103
Target Start/End: Original strand, 5861467 - 5861529
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatcca---acatcttatatgatat 103  Q
    |||||||||||| ||||| |||||||||| ||||||||||| ||   ||||||||||||||||    
T  5861467 tatgaaaatttgttattttaaaaatattcatcgagacgaatacaacgacatcttatatgatat 5861529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 13398856 - 13398960
Alignment:
Q  1 acaattttgaacttaaatatctttaatattctattnnnnnnnntatgaaaatttgatatttaaaaaatattcgtcgagacgaatccaacatcttatatga 100  Q
    |||||||| ||| ||||||||||||||| | ||||        | |||||||||||||||| |||||||||   |||||| |||||||||| |||||||     
T  13398856 acaattttaaacataaatatctttaataatttattaaaaaaattctgaaaatttgatattttaaaaatatttaccgagacaaatccaacattttatatgc 13398955  T
Q  101 tatat 105  Q
    |||||    
T  13398956 tatat 13398960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 103
Target Start/End: Complemental strand, 25766601 - 25766543
Alignment:
Q  48 aaaatttgatatttaaaaaatattcgtcgagacgaatcca---acatcttatatgatat 103  Q
    ||||||||||||||  ||||||||| ||||||||||||||   ||||||||||||||||    
T  25766601 aaaatttgatattttgaaaatattcatcgagacgaatccaatgacatcttatatgatat 25766543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 172
Target Start/End: Original strand, 31975508 - 31975580
Alignment:
Q  101 tatatattagtagaaaa-tagagtcaaaacatgttatatgaacaatacatatttttaaattgggtcatttaaa 172  Q
    ||||||||||||||||| |||  |||||  ||||||| ||| ||||||| ||||||||||| |||||||||||    
T  31975508 tatatattagtagaaaaataggatcaaactatgttatgtgagcaatacacatttttaaattaggtcatttaaa 31975580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 84
Target Start/End: Complemental strand, 32543336 - 32543296
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaat 84  Q
    ||||||||||||||||||| ||||||||| |||||||||||    
T  32543336 tatgaaaatttgatatttataaaatattcatcgagacgaat 32543296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 103
Target Start/End: Original strand, 6730006 - 6730067
Alignment:
Q  45 atgaaaatttgatatttaaaaaatattcgtcgagacgaatccaac---atcttatatgatat 103  Q
    |||||||||||||||||  |||||| || ||||||||||||||||   ||||||||||||||    
T  6730006 atgaaaatttgatattttgaaaatactcatcgagacgaatccaacgatatcttatatgatat 6730067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 103
Target Start/End: Original strand, 23873181 - 23873236
Alignment:
Q  48 aaaatttgatatttaaaaaatattcgtcgagacgaatccaacatcttatatgatat 103  Q
    ||||||| ||||||||||||||||  | ||||||||||||||||| ||||| ||||    
T  23873181 aaaatttaatatttaaaaaatatttattgagacgaatccaacatcgtatataatat 23873236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 103
Target Start/End: Complemental strand, 39997117 - 39997062
Alignment:
Q  48 aaaatttgatatttaaaaaatattcgtcgagacgaatccaacatcttatatgatat 103  Q
    ||||||| ||||||  ||||||||| || ||||||||||||||||||| |||||||    
T  39997117 aaaatttaatattttgaaaatattcatcaagacgaatccaacatcttaaatgatat 39997062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 103
Target Start/End: Complemental strand, 41575722 - 41575661
Alignment:
Q  45 atgaaaatttgatatttaaaaaatattcgtcgagacgaatc---caacatcttatatgatat 103  Q
    |||||||||||||||||  ||||||||| ||||||||||||   | ||||||||||||||||    
T  41575722 atgaaaatttgatattttgaaaatattcatcgagacgaatctaacgacatcttatatgatat 41575661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 90
Target Start/End: Complemental strand, 4045390 - 4045348
Alignment:
Q  48 aaaatttgatatttaaaaaatattcgtcgagacgaatccaaca 90  Q
    ||||||| |||||| |||||||||| |||||||||||||||||    
T  4045390 aaaatttaatattttaaaaatattcatcgagacgaatccaaca 4045348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 90
Target Start/End: Original strand, 4045954 - 4045996
Alignment:
Q  48 aaaatttgatatttaaaaaatattcgtcgagacgaatccaaca 90  Q
    ||||||| |||||| |||||||||| |||||||||||||||||    
T  4045954 aaaatttaatattttaaaaatattcatcgagacgaatccaaca 4045996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 90
Target Start/End: Complemental strand, 7443048 - 7443006
Alignment:
Q  48 aaaatttgatatttaaaaaatattcgtcgagacgaatccaaca 90  Q
    ||||||| |||||| |||||||||| |||||||||||||||||    
T  7443048 aaaatttaatattttaaaaatattcatcgagacgaatccaaca 7443006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 90
Target Start/End: Complemental strand, 27668119 - 27668073
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatccaaca 90  Q
    ||||||||||| |||||| |||||||||  |||||||||||||||||    
T  27668119 tatgaaaatttaatattttaaaaatattaatcgagacgaatccaaca 27668073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 90
Target Start/End: Original strand, 30708832 - 30708874
Alignment:
Q  48 aaaatttgatatttaaaaaatattcgtcgagacgaatccaaca 90  Q
    ||||||| |||||| |||||||||| |||||||||||||||||    
T  30708832 aaaatttaatattttaaaaatattcatcgagacgaatccaaca 30708874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 90
Target Start/End: Complemental strand, 30776350 - 30776308
Alignment:
Q  48 aaaatttgatatttaaaaaatattcgtcgagacgaatccaaca 90  Q
    ||||||| |||||| |||||||||| |||||||||||||||||    
T  30776350 aaaatttaatattttaaaaatattcatcgagacgaatccaaca 30776308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 90
Target Start/End: Original strand, 42951440 - 42951486
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatccaaca 90  Q
    ||||||||||| |||||| ||||||||||  ||||||||||||||||    
T  42951440 tatgaaaatttaatattttaaaaatattcaacgagacgaatccaaca 42951486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 103
Target Start/End: Complemental strand, 5096409 - 5096347
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatc---caacatcttatatgatat 103  Q
    ||||||||||||||||||  |||||| || ||||||||||||   | ||||||||||||||||    
T  5096409 tatgaaaatttgatattttgaaaatactcatcgagacgaatctaacgacatcttatatgatat 5096347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 103
Target Start/End: Original strand, 7724513 - 7724575
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatc---caacatcttatatgatat 103  Q
    ||||||||||||||||||  |||||| || ||||||||||||   | ||||||||||||||||    
T  7724513 tatgaaaatttgatattttgaaaatactcatcgagacgaatctaacgacatcttatatgatat 7724575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 103
Target Start/End: Complemental strand, 8373595 - 8373533
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatc---caacatcttatatgatat 103  Q
    ||||||||||||||||||  |||||| || ||||||||||||   | ||||||||||||||||    
T  8373595 tatgaaaatttgatattttgaaaatactcatcgagacgaatctaacgacatcttatatgatat 8373533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 103
Target Start/End: Complemental strand, 9877240 - 9877182
Alignment:
Q  48 aaaatttgatatttaaaaaatattcgtcgagacgaatcc---aacatcttatatgatat 103  Q
    ||||||| |||||| || ||||||| |||||||||||||   |||||||||||||||||    
T  9877240 aaaatttaatattttaacaatattcatcgagacgaatccaacaacatcttatatgatat 9877182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 103
Target Start/End: Complemental strand, 12209150 - 12209088
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatcca---acatcttatatgatat 103  Q
    ||||||||||||||||||  |||||| || |||||| |||||||   ||||||||||||||||    
T  12209150 tatgaaaatttgatattttgaaaatactcatcgagatgaatccaacgacatcttatatgatat 12209088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 103
Target Start/End: Complemental strand, 15177530 - 15177468
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatc---caacatcttatatgatat 103  Q
    ||||||||||||||||||  |||||| || ||||||||||||   | ||||||||||||||||    
T  15177530 tatgaaaatttgatattttgaaaatactcatcgagacgaatctaacgacatcttatatgatat 15177468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 103
Target Start/End: Original strand, 15770988 - 15771046
Alignment:
Q  48 aaaatttgatatttaaaaaatattcgtcgagacgaatc---caacatcttatatgatat 103  Q
    |||||||||||||| |||||||||| |||||| |||||   | ||||||||||||||||    
T  15770988 aaaatttgatattttaaaaatattcatcgagatgaatcaaacgacatcttatatgatat 15771046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 103
Target Start/End: Original strand, 23671480 - 23671538
Alignment:
Q  48 aaaatttgatatttaaaaaatattcgtcgagacgaatc---caacatcttatatgatat 103  Q
    ||||||| |||||| ||||||| || ||||||||||||   ||||||||||||||||||    
T  23671480 aaaatttaatattttaaaaatactcatcgagacgaatccaacaacatcttatatgatat 23671538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 178
Target Start/End: Complemental strand, 24853315 - 24853259
Alignment:
Q  122 gtcaaaacatgttatatgaacaatacatatttttaaattgggtcatttaaaaaggga 178  Q
    |||||| |||| ||| |||| | |||| |||||||||||||||||||||||| ||||    
T  24853315 gtcaaagcatgatatgtgaatagtacacatttttaaattgggtcatttaaaatggga 24853259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 103
Target Start/End: Complemental strand, 36931761 - 36931711
Alignment:
Q  56 atatttaaaaaatattcgtcgagacgaatcc---aacatcttatatgatat 103  Q
    |||||| |||||||||| |||||||||||||   |||||||||||||||||    
T  36931761 atattttaaaaatattcatcgagacgaatccaacaacatcttatatgatat 36931711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 103
Target Start/End: Original strand, 37987838 - 37987900
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatcca---acatcttatatgatat 103  Q
    ||||||||||||||||||  |||||| || |||||||||||| |   ||||||||||||||||    
T  37987838 tatgaaaatttgatattttgaaaatactcatcgagacgaatctaatgacatcttatatgatat 37987900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 103
Target Start/End: Complemental strand, 38963956 - 38963894
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatc---caacatcttatatgatat 103  Q
    ||||||||||||||||||  |||||| || ||||||||||||   | ||||||||||||||||    
T  38963956 tatgaaaatttgatattttgaaaatactcatcgagacgaatctaacgacatcttatatgatat 38963894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 103
Target Start/End: Original strand, 41319826 - 41319888
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatc---caacatcttatatgatat 103  Q
    ||||||||||||||||||  |||||| || ||||||||||||   | ||||||||||||||||    
T  41319826 tatgaaaatttgatattttgaaaatactcatcgagacgaatctaacgacatcttatatgatat 41319888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 103
Target Start/End: Complemental strand, 41436993 - 41436931
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatc---caacatcttatatgatat 103  Q
    ||||||||||||||||||  |||||| || ||||||||||||   | ||||||||||||||||    
T  41436993 tatgaaaatttgatattttgaaaatactcatcgagacgaatctaacgacatcttatatgatat 41436931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 103
Target Start/End: Original strand, 42038627 - 42038685
Alignment:
Q  48 aaaatttgatatttaaaaaatattcgtcgagacgaatc---caacatcttatatgatat 103  Q
    ||||||| |||||| ||||||| || ||||||||||||   ||||||||||||||||||    
T  42038627 aaaatttaatattttaaaaatactcatcgagacgaatccaacaacatcttatatgatat 42038685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 103
Target Start/End: Complemental strand, 45036524 - 45036462
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatc---caacatcttatatgatat 103  Q
    ||||||||||||||||||  |||||| || ||||||||||||   | ||||||||||||||||    
T  45036524 tatgaaaatttgatattttgaaaatactcatcgagacgaatctaacgacatcttatatgatat 45036462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 45; Significance: 9e-17; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 3 - 98
Target Start/End: Original strand, 9281319 - 9281415
Alignment:
Q  3 aattttgaacttaaatatctttaatattctattnnnnnnnnt-atgaaaatttgatatttaaaaaatattcgtcgagacgaatccaacatcttatat 98  Q
    |||||||||||||||||||||||||| ||||||        | |||||||||||||||||  ||||||||| |||||||||| ||||||||||||||    
T  9281319 aattttgaacttaaatatctttaataatctattagaaaaaattatgaaaatttgatattttgaaaatattcatcgagacgaacccaacatcttatat 9281415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 45 - 104
Target Start/End: Original strand, 23369133 - 23369192
Alignment:
Q  45 atgaaaatttgatatttaaaaaatattcgtcgagacgaatccaacatcttatatgatata 104  Q
    |||||||||| ||||||  |||||||||||||||||||||||||||||||| ||||||||    
T  23369133 atgaaaattttatattttgaaaatattcgtcgagacgaatccaacatcttacatgatata 23369192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 44 - 103
Target Start/End: Complemental strand, 935189 - 935130
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatccaacatcttatatgatat 103  Q
    ||||||||||| ||||||||||||||||| ||||||||||| ||| || |||||||||||    
T  935189 tatgaaaatttaatatttaaaaaatattcatcgagacgaatacaatattttatatgatat 935130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 4016670 - 4016579
Alignment:
Q  1 acaattttgaacttaaatatctttaatattctattnnnnnnnnt-atgaaaatttgatatttaaaaaatattcgtcgagacgaatccaacat 91  Q
    |||||||| ||||||||||||||||||| ||||||        | ||||||||||||||||| |||||||||| |||| |||||||||||||    
T  4016670 acaattttaaacttaaatatctttaataatctattagaaaaaattatgaaaatttgatattttaaaaatattcatcgaaacgaatccaacat 4016579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 101
Target Start/End: Complemental strand, 50029334 - 50029277
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatccaacatcttatatgat 101  Q
    ||||||||||| ||||||  ||||||||| | ||||||||||||||||||||||||||    
T  50029334 tatgaaaatttaatatttttaaaatattcattgagacgaatccaacatcttatatgat 50029277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 44 - 104
Target Start/End: Original strand, 39557481 - 39557541
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatccaacatcttatatgatata 104  Q
    ||||||||||||||||||  ||||||||  ||||||| |||||||||||||||||| ||||    
T  39557481 tatgaaaatttgatattttgaaaatattaatcgagacaaatccaacatcttatatgctata 39557541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 44 - 103
Target Start/End: Original strand, 18971452 - 18971511
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatccaacatcttatatgatat 103  Q
    ||||||||||| ||||||  ||||||||| ||||||| ||| ||||||||||||||||||    
T  18971452 tatgaaaatttcatattttgaaaatattcatcgagacaaattcaacatcttatatgatat 18971511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 103
Target Start/End: Complemental strand, 37166636 - 37166581
Alignment:
Q  48 aaaatttgatatttaaaaaatattcgtcgagacgaatccaacatcttatatgatat 103  Q
    |||||||||||||| |||||||||| |||||||||||||  |||||||||| ||||    
T  37166636 aaaatttgatattttaaaaatattcatcgagacgaatccctcatcttatataatat 37166581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 44 - 90
Target Start/End: Complemental strand, 3547582 - 3547536
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatccaaca 90  Q
    ||||||||||| |||||| |||||||||| |||||||||||||||||    
T  3547582 tatgaaaatttaatattttaaaaatattcatcgagacgaatccaaca 3547536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 44 - 105
Target Start/End: Complemental strand, 40415083 - 40415019
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatccaac---atcttatatgatatat 105  Q
    |||||||||||||||||| |||||||||| ||||||  ||||||||   ||||||||||||||||    
T  40415083 tatgaaaatttgatattttaaaaatattcatcgagataaatccaacaaaatcttatatgatatat 40415019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 44 - 103
Target Start/End: Original strand, 43394457 - 43394518
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatcca--acatcttatatgatat 103  Q
    ||||||||||||||||||  |||||| || ||||||||||||||  ||||||||||||||||    
T  43394457 tatgaaaatttgatattttgaaaatactcatcgagacgaatccaagacatcttatatgatat 43394518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 103
Target Start/End: Complemental strand, 4465042 - 4464980
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatc---caacatcttatatgatat 103  Q
    |||||||||||||||||| ||||||| || ||||||||||||   | ||||||||||||||||    
T  4465042 tatgaaaatttgatattttaaaaatactcatcgagacgaatctaacgacatcttatatgatat 4464980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 103 - 179
Target Start/End: Original strand, 28389248 - 28389324
Alignment:
Q  103 tatattagtagaaaatagagtcaaaacatgttatatgaacaatacatatttttaaattgggtcatttaaaaagggac 179  Q
    |||||||||| ||||||   | ||||||||||||||||| | |||| ||||||||| | |||||||||||| |||||    
T  28389248 tatattagtaaaaaatatgattaaaacatgttatatgaatagtacacatttttaaagtaggtcatttaaaatgggac 28389324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 103
Target Start/End: Complemental strand, 29720556 - 29720494
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatcca---acatcttatatgatat 103  Q
    ||||||||||||||||||  |||||| || ||||||||||||||   ||||||||||||||||    
T  29720556 tatgaaaatttgatattttgaaaatactcatcgagacgaatccaacgacatcttatatgatat 29720494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 103
Target Start/End: Complemental strand, 33462866 - 33462804
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatc---caacatcttatatgatat 103  Q
    ||||||||||||||||||  ||||||||| ||||||||||||   |||||| |||||||||||    
T  33462866 tatgaaaatttgatattttgaaaatattcatcgagacgaatctaacaacattttatatgatat 33462804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 103
Target Start/End: Complemental strand, 34669769 - 34669707
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatc---caacatcttatatgatat 103  Q
    |||||||||||||||||| ||||||| || ||||||||||||   | ||||||||||||||||    
T  34669769 tatgaaaatttgatattttaaaaatactcatcgagacgaatctaacgacatcttatatgatat 34669707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 172
Target Start/End: Complemental strand, 43382803 - 43382731
Alignment:
Q  100 atatatattagtagaaaatagagtcaaaacatgttatatgaacaatacatatttttaaattgggtcatttaaa 172  Q
    ||||||||||||||||||   |||||||  | |||||||||| ||| ||||||||||||||  ||||||||||    
T  43382803 atatatattagtagaaaaattagtcaaagtaggttatatgaataatgcatatttttaaattaagtcatttaaa 43382731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 103
Target Start/End: Complemental strand, 46866504 - 46866442
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatc---caacatcttatatgatat 103  Q
    ||||||||||||||||||  |||||| || ||||||||||||   ||||||||||||||||||    
T  46866504 tatgaaaatttgatattttgaaaatactcatcgagacgaatctaacaacatcttatatgatat 46866442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 44 - 95
Target Start/End: Original strand, 9145602 - 9145653
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatccaacatctta 95  Q
    |||||| |||| |||||| |||||||||| |||||||||| |||||||||||    
T  9145602 tatgaagatttaatattttaaaaatattcatcgagacgaacccaacatctta 9145653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 103
Target Start/End: Complemental strand, 20549054 - 20548999
Alignment:
Q  48 aaaatttgatatttaaaaaatattcgtcgagacgaatccaacatcttatatgatat 103  Q
    ||||||| |||||| |||||||||  |||||| ||||| |||||||||||||||||    
T  20549054 aaaatttaatattttaaaaatattaatcgagaggaatctaacatcttatatgatat 20548999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 102
Target Start/End: Complemental strand, 4238781 - 4238723
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatccaacatcttatatgata 102  Q
    |||||||| || |||||| |||||||||| ||||||||  |||||||||||| ||||||    
T  4238781 tatgaaaacttaatattttaaaaatattcatcgagacggttccaacatcttacatgata 4238723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 90
Target Start/End: Complemental strand, 7671474 - 7671428
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatccaaca 90  Q
    ||||||||| | |||||| |||||||||| |||||||||||||||||    
T  7671474 tatgaaaatataatattttaaaaatattcatcgagacgaatccaaca 7671428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 90
Target Start/End: Original strand, 15503123 - 15503169
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatccaaca 90  Q
    ||||||||||| |||||| ||||||||||  ||||||||||||||||    
T  15503123 tatgaaaatttaatattttaaaaatattcaacgagacgaatccaaca 15503169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 90
Target Start/End: Original strand, 17052964 - 17053010
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatccaaca 90  Q
    ||||||||||| |||||| |||||||||| ||||||||| |||||||    
T  17052964 tatgaaaatttaatattttaaaaatattcatcgagacgattccaaca 17053010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 90
Target Start/End: Original strand, 27849055 - 27849097
Alignment:
Q  48 aaaatttgatatttaaaaaatattcgtcgagacgaatccaaca 90  Q
    ||||||| |||||| |||||||||| |||||||||||||||||    
T  27849055 aaaatttaatattttaaaaatattcatcgagacgaatccaaca 27849097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 90
Target Start/End: Complemental strand, 28562291 - 28562249
Alignment:
Q  48 aaaatttgatatttaaaaaatattcgtcgagacgaatccaaca 90  Q
    |||||||||||||| |||||||||| ||||||| |||||||||    
T  28562291 aaaatttgatattttaaaaatattcatcgagacaaatccaaca 28562249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 90
Target Start/End: Original strand, 28690616 - 28690662
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatccaaca 90  Q
    ||||||||||| || |||||||||||||| |||| ||||||||||||    
T  28690616 tatgaaaatttaatttttaaaaaatattcatcgaaacgaatccaaca 28690662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 90
Target Start/End: Complemental strand, 29728255 - 29728213
Alignment:
Q  48 aaaatttgatatttaaaaaatattcgtcgagacgaatccaaca 90  Q
    ||||||| |||||| |||||||||| |||||||||||||||||    
T  29728255 aaaatttaatattttaaaaatattcatcgagacgaatccaaca 29728213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 90
Target Start/End: Complemental strand, 35718016 - 35717970
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatccaaca 90  Q
    ||||||||||| |||||| |||| ||||| |||||||||||||||||    
T  35718016 tatgaaaatttaatattttaaaagtattcatcgagacgaatccaaca 35717970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 90
Target Start/End: Original strand, 38492155 - 38492197
Alignment:
Q  48 aaaatttgatatttaaaaaatattcgtcgagacgaatccaaca 90  Q
    ||||||| |||||| |||||||||| |||||||||||||||||    
T  38492155 aaaatttaatattttaaaaatattcatcgagacgaatccaaca 38492197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 85
Target Start/End: Original strand, 10228627 - 10228668
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatc 85  Q
    ||||||||||||||||||  ||||||||| ||||||||||||    
T  10228627 tatgaaaatttgatattttgaaaatattcatcgagacgaatc 10228668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 103
Target Start/End: Original strand, 14750958 - 14751021
Alignment:
Q  44 tatgaaaatttgatattta-aaaaatattcgtcgagacgaatc---caacatcttatatgatat 103  Q
    ||||||||||||||||||  |||||||||| ||||||||||||   | ||||||||||||||||    
T  14750958 tatgaaaatttgatattttgaaaaatattcatcgagacgaatctaacgacatcttatatgatat 14751021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 85
Target Start/End: Complemental strand, 43170135 - 43170094
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatc 85  Q
    |||||||||||||||||| ||||||| ||| |||||||||||    
T  43170135 tatgaaaatttgatattttaaaaatactcgccgagacgaatc 43170094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 89
Target Start/End: Complemental strand, 50888506 - 50888461
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatccaac 89  Q
    ||||||||||||||||||  ||||||||| ||||||||||| ||||    
T  50888506 tatgaaaatttgatattttgaaaatattcatcgagacgaattcaac 50888461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 103
Target Start/End: Original strand, 900986 - 901048
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatc---caacatcttatatgatat 103  Q
    ||||||||||||||||||  |||||| || ||||||||||||   | ||||||||||||||||    
T  900986 tatgaaaatttgatattttgaaaatactcatcgagacgaatctaacgacatcttatatgatat 901048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 103
Target Start/End: Original strand, 2643167 - 2643229
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatccaa---catcttatatgatat 103  Q
    ||||||||||||||||||  |||||| || |||||||||||| ||   |||||||||||||||    
T  2643167 tatgaaaatttgatattttgaaaatactcatcgagacgaatctaacggcatcttatatgatat 2643229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 103
Target Start/End: Complemental strand, 9484757 - 9484695
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatc---caacatcttatatgatat 103  Q
    ||||||||||||||||||  |||||| || ||||||||||||   | ||||||||||||||||    
T  9484757 tatgaaaatttgatattttgaaaatactcatcgagacgaatctaacgacatcttatatgatat 9484695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 103
Target Start/End: Original strand, 10819341 - 10819403
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatc---caacatcttatatgatat 103  Q
    ||||||||||||||||||   |||||||| ||||||||||||   | ||||||||||||||||    
T  10819341 tatgaaaatttgatattttggaaatattcatcgagacgaatccgacgacatcttatatgatat 10819403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 103
Target Start/End: Original strand, 16434755 - 16434817
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatc---caacatcttatatgatat 103  Q
    ||||||||||||||||||  |||||| || ||||||||||||   | ||||||||||||||||    
T  16434755 tatgaaaatttgatattttgaaaatactcatcgagacgaatctaacgacatcttatatgatat 16434817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 103
Target Start/End: Complemental strand, 20081057 - 20080995
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatccaa---catcttatatgatat 103  Q
    |||||||||||||||||| ||| |||||  || ||||||||||||   |||||||||||||||    
T  20081057 tatgaaaatttgatattttaaatatattaatcaagacgaatccaacggcatcttatatgatat 20080995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 103
Target Start/End: Complemental strand, 25097344 - 25097286
Alignment:
Q  48 aaaatttgatatttaaaaaatattcgtcgagacgaatc---caacatcttatatgatat 103  Q
    ||||||| |||||| |||||||||| ||||||||||||   |||||||||| |||||||    
T  25097344 aaaatttaatattttaaaaatattcatcgagacgaatcctacaacatcttacatgatat 25097286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 103
Target Start/End: Original strand, 29455606 - 29455668
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatc---caacatcttatatgatat 103  Q
    ||||||||||||||||||  |||||| || ||||||||||||   | ||||||||||||||||    
T  29455606 tatgaaaatttgatattttgaaaatactcatcgagacgaatctaacgacatcttatatgatat 29455668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 103
Target Start/End: Original strand, 29793276 - 29793338
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatc---caacatcttatatgatat 103  Q
    ||||||||||||||||||  |||||| || ||||||||||||   | ||||||||||||||||    
T  29793276 tatgaaaatttgatattttgaaaatactcatcgagacgaatctaacgacatcttatatgatat 29793338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 103
Target Start/End: Complemental strand, 32951297 - 32951235
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatccaaca---tcttatatgatat 103  Q
    |||||||| || |||||| |||||||||| ||||||||| |||||||   |||||||||||||    
T  32951297 tatgaaaacttaatattttaaaaatattcatcgagacgattccaacaacatcttatatgatat 32951235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 103
Target Start/End: Original strand, 34263602 - 34263664
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatc---caacatcttatatgatat 103  Q
    ||||||||||||||||||  |||||| || ||||||||||||   | ||||||||||||||||    
T  34263602 tatgaaaatttgatattttgaaaatactcatcgagacgaatctaacgacatcttatatgatat 34263664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 103
Target Start/End: Complemental strand, 34555312 - 34555250
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatc---caacatcttatatgatat 103  Q
    ||||||||||||||||||  |||||| || ||||||||||||   | ||||||||||||||||    
T  34555312 tatgaaaatttgatattttgaaaatactcatcgagacgaatctaacgacatcttatatgatat 34555250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 103
Target Start/End: Original strand, 36179034 - 36179096
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatc---caacatcttatatgatat 103  Q
    ||||||||||||||||||  |||||| || ||||||||||||   | ||||||||||||||||    
T  36179034 tatgaaaatttgatattttgaaaatactcatcgagacgaatctaacgacatcttatatgatat 36179096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 103
Target Start/End: Original strand, 49057956 - 49058018
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatc---caacatcttatatgatat 103  Q
    ||||||||||| |||||| |||||||||| |||| |||||||   |||||||||| |||||||    
T  49057956 tatgaaaatttaatattttaaaaatattcatcgaaacgaatctaacaacatcttacatgatat 49058018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 103
Target Start/End: Original strand, 49076324 - 49076386
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatc---caacatcttatatgatat 103  Q
    ||||||||||||||||||  |||||| || ||||||||||||   | ||||||||||||||||    
T  49076324 tatgaaaatttgatattttgaaaatactcatcgagacgaatctaacgacatcttatatgatat 49076386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 85
Target Start/End: Complemental strand, 49818917 - 49818877
Alignment:
Q  45 atgaaaatttgatatttaaaaaatattcgtcgagacgaatc 85  Q
    ||||||||||||||||| ||||||| || ||||||||||||    
T  49818917 atgaaaatttgatattttaaaaatactcatcgagacgaatc 49818877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 103
Target Start/End: Complemental strand, 50673838 - 50673776
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatc---caacatcttatatgatat 103  Q
    |||||||||||||||||| ||||||| || |||||||||| |   | ||||||||||||||||    
T  50673838 tatgaaaatttgatattttaaaaatactcatcgagacgaacctaacgacatcttatatgatat 50673776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 103
Target Start/End: Original strand, 54684570 - 54684628
Alignment:
Q  48 aaaatttgatatttaaaaaatattcgtcgagacgaatc---caacatcttatatgatat 103  Q
    |||||||||||||| |||||||||| |||||||| |||   ||||||||||||| ||||    
T  54684570 aaaatttgatattttaaaaatattcatcgagacggatcgaacaacatcttatataatat 54684628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 45; Significance: 9e-17; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 5 - 98
Target Start/End: Complemental strand, 43891598 - 43891506
Alignment:
Q  5 ttttgaacttaaatatctttaatattctattnnnnnnnntatgaaaatttgatatttaaaaaatattcgtcgagacgaatccaacatcttatat 98  Q
    |||||||||||||||||||||||||||||||        ||||||||||||||||||   |||||||  |||||||||||||||||||||||||    
T  43891598 ttttgaacttaaatatctttaatattctattaaaaaat-tatgaaaatttgatatttggcaaatatttatcgagacgaatccaacatcttatat 43891506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 44 - 103
Target Start/End: Complemental strand, 32968271 - 32968212
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatccaacatcttatatgatat 103  Q
    ||||||||||| ||||||| ||||||||| ||||||| ||||||||||||||||||||||    
T  32968271 tatgaaaatttaatatttataaaatattcatcgagacaaatccaacatcttatatgatat 32968212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 44 - 105
Target Start/End: Original strand, 40711006 - 40711067
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatccaacatcttatatgatatat 105  Q
    |||||||||||||||||  |||||||||| |||| ||||||||||||||||||||| |||||    
T  40711006 tatgaaaatttgatattctaaaaatattcatcgaaacgaatccaacatcttatatgttatat 40711067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 44 - 103
Target Start/End: Original strand, 26441737 - 26441796
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatccaacatcttatatgatat 103  Q
    |||||||| || |||||| |||||||||| ||||||||| ||||||||||||||||||||    
T  26441737 tatgaaaacttaatattttaaaaatattcatcgagacgattccaacatcttatatgatat 26441796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 44 - 103
Target Start/End: Complemental strand, 31971548 - 31971486
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatcc---aacatcttatatgatat 103  Q
    ||||||||||| |||||| |||||||||| |||||||||||||   |||||||||||||||||    
T  31971548 tatgaaaatttaatattttaaaaatattcatcgagacgaatccaacaacatcttatatgatat 31971486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 44 - 95
Target Start/End: Original strand, 52163558 - 52163609
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatccaacatctta 95  Q
    ||||||||||| |||||| ||||| |||| ||||||||||||||||||||||    
T  52163558 tatgaaaatttaatattttaaaaacattcatcgagacgaatccaacatctta 52163609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 44 - 90
Target Start/End: Complemental strand, 38738139 - 38738093
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatccaaca 90  Q
    ||||||||||| |||||| |||||||||| |||||||||||||||||    
T  38738139 tatgaaaatttaatattttaaaaatattcatcgagacgaatccaaca 38738093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 48 - 90
Target Start/End: Complemental strand, 41501764 - 41501722
Alignment:
Q  48 aaaatttgatatttaaaaaatattcgtcgagacgaatccaaca 90  Q
    |||||||||||||| |||||||||| |||||||||||||||||    
T  41501764 aaaatttgatattttaaaaatattcatcgagacgaatccaaca 41501722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 89
Target Start/End: Original strand, 37515437 - 37515482
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatccaac 89  Q
    ||||||||||| |||||| |||||||||| ||||||||||||||||    
T  37515437 tatgaaaatttaatattttaaaaatattcatcgagacgaatccaac 37515482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 87
Target Start/End: Complemental strand, 3143324 - 3143284
Alignment:
Q  47 gaaaatttgatatttaaaaaatattcgtcgagacgaatcca 87  Q
    |||||||| ||||||||||||||||| ||||||||||||||    
T  3143324 gaaaatttaatatttaaaaaatattcatcgagacgaatcca 3143284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 44 - 117
Target Start/End: Complemental strand, 3138753 - 3138676
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatccaac---atcttatatga-tatatattagtagaaaa 117  Q
    ||||||||||||||||||  ||||||||| ||||||| |||| |||   ||||||||||| | |||||||||||||||    
T  3138753 tatgaaaatttgatattttgaaaatattcatcgagacaaatctaacgatatcttatatgattgtatattagtagaaaa 3138676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 44 - 87
Target Start/End: Complemental strand, 16751614 - 16751571
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatcca 87  Q
    ||||||||||| |||||| |||||||||| ||||||||||||||    
T  16751614 tatgaaaatttaatattttaaaaatattcatcgagacgaatcca 16751571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 44 - 104
Target Start/End: Original strand, 26345311 - 26345373
Alignment:
Q  44 tatgaaaatttgatatttaa--aaaatattcgtcgagacgaatccaacatcttatatgatata 104  Q
    ||||||||||||||||||    ||||||||| ||||||| |||||||||| ||||||||||||    
T  26345311 tatgaaaatttgatattttttgaaaatattcatcgagacaaatccaacattttatatgatata 26345373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 90
Target Start/End: Original strand, 3529276 - 3529322
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatccaaca 90  Q
    ||||||||||| |||||| |||||||||  |||||||||||||||||    
T  3529276 tatgaaaatttaatattttaaaaatattgatcgagacgaatccaaca 3529322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 90
Target Start/End: Original strand, 14075834 - 14075880
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatccaaca 90  Q
    ||||||||||| |||||| |||||||||| ||||||||||| |||||    
T  14075834 tatgaaaatttaatattttaaaaatattcatcgagacgaattcaaca 14075880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 109
Target Start/End: Original strand, 22328062 - 22328130
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaat---ccaacatcttatatgatatatatta 109  Q
    ||||||||||| ||||||  ||||||||| |||||||||||    ||||||||||||||||| ||||||    
T  22328062 tatgaaaatttaatattttgaaaatattcatcgagacgaattcaacaacatcttatatgatagatatta 22328130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 86
Target Start/End: Original strand, 23340890 - 23340932
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatcc 86  Q
    ||||||||||| |||||| |||||||||| |||||||||||||    
T  23340890 tatgaaaatttaatattttaaaaatattcatcgagacgaatcc 23340932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 90
Target Start/End: Complemental strand, 23569835 - 23569789
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatccaaca 90  Q
    ||||||||||| |||||| |||||||||| || ||||||||||||||    
T  23569835 tatgaaaatttaatattttaaaaatattcatcaagacgaatccaaca 23569789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 90
Target Start/End: Original strand, 25531882 - 25531924
Alignment:
Q  48 aaaatttgatatttaaaaaatattcgtcgagacgaatccaaca 90  Q
    ||||||| |||||| |||||||||| |||||||||||||||||    
T  25531882 aaaatttaatattttaaaaatattcatcgagacgaatccaaca 25531924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 90
Target Start/End: Complemental strand, 30529207 - 30529165
Alignment:
Q  48 aaaatttgatatttaaaaaatattcgtcgagacgaatccaaca 90  Q
    ||||||| |||||| |||||||||| |||||||||||||||||    
T  30529207 aaaatttaatattttaaaaatattcatcgagacgaatccaaca 30529165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 178
Target Start/End: Complemental strand, 32834879 - 32834802
Alignment:
Q  101 tatatattagtagaaaa-tagagtcaaaacatgttatatgaacaatacatatttttaaattgggtcatttaaaaaggga 178  Q
    ||||||||||||||||| |||  ||||||||  |||||||  || |||||||||||||||| |||||||||||| ||||    
T  32834879 tatatattagtagaaaaataggatcaaaacaaattatatgt-cattacatatttttaaattaggtcatttaaaatggga 32834802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 90
Target Start/End: Original strand, 37281196 - 37281238
Alignment:
Q  48 aaaatttgatatttaaaaaatattcgtcgagacgaatccaaca 90  Q
    ||||||| |||||| |||||||||| |||||||||||||||||    
T  37281196 aaaatttaatattttaaaaatattcatcgagacgaatccaaca 37281238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 90
Target Start/End: Complemental strand, 45235002 - 45234960
Alignment:
Q  48 aaaatttgatatttaaaaaatattcgtcgagacgaatccaaca 90  Q
    ||||||| |||||| |||||||||| |||||||||||||||||    
T  45235002 aaaatttaatattttaaaaatattcatcgagacgaatccaaca 45234960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 103
Target Start/End: Complemental strand, 5111101 - 5111048
Alignment:
Q  50 aatttgatatttaaaaaatattcgtcgagacgaatccaacatcttatatgatat 103  Q
    ||||| |||||| |||| ||||| ||||||||||| ||||||||||||| ||||    
T  5111101 aatttaatattttaaaagtattcatcgagacgaattcaacatcttatataatat 5111048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 85
Target Start/End: Complemental strand, 47912442 - 47912401
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatc 85  Q
    |||||||||||||||||| |||||||||| ||||||| ||||    
T  47912442 tatgaaaatttgatattttaaaaatattcatcgagacaaatc 47912401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 100
Target Start/End: Complemental strand, 3088957 - 3088901
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatccaacatcttatatga 100  Q
    ||||||||||  |||||| |||||||||  |||||| ||||| ||||||||||||||    
T  3088957 tatgaaaattgaatattttaaaaatatttatcgagatgaatcaaacatcttatatga 3088901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 103
Target Start/End: Complemental strand, 4489222 - 4489160
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatc---caacatcttatatgatat 103  Q
    ||||||||||||||||||  |||||| || ||||||||||||   | ||||||||||||||||    
T  4489222 tatgaaaatttgatattttgaaaatactcatcgagacgaatctaacgacatcttatatgatat 4489160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 103
Target Start/End: Original strand, 5606298 - 5606360
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatc---caacatcttatatgatat 103  Q
    ||||||||||||||||||  |||||| || ||||||||||||   | ||||||||||||||||    
T  5606298 tatgaaaatttgatattttgaaaatactcatcgagacgaatctaacgacatcttatatgatat 5606360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 103
Target Start/End: Complemental strand, 5945926 - 5945864
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatc---caacatcttatatgatat 103  Q
    ||||||||||||||||||  |||||| || ||||||||||||   | ||||||||||||||||    
T  5945926 tatgaaaatttgatattttgaaaatactcatcgagacgaatctaacgacatcttatatgatat 5945864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 103
Target Start/End: Original strand, 6017356 - 6017418
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatc---caacatcttatatgatat 103  Q
    ||||||||||||||||||  |||||| || ||||||||||||   | ||||||||||||||||    
T  6017356 tatgaaaatttgatattttgaaaatactcatcgagacgaatctaacgacatcttatatgatat 6017418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 103
Target Start/End: Original strand, 7075237 - 7075299
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatc---caacatcttatatgatat 103  Q
    ||||||||||||||||||  |||||| || ||||||||||||   | ||||||||||||||||    
T  7075237 tatgaaaatttgatattttgaaaatactcatcgagacgaatctaacgacatcttatatgatat 7075299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 103
Target Start/End: Original strand, 10100420 - 10100482
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatc---caacatcttatatgatat 103  Q
    ||||||||||||||||||  |||||| || ||||||||||||   | ||||||||||||||||    
T  10100420 tatgaaaatttgatattttgaaaatactcatcgagacgaatctaacgacatcttatatgatat 10100482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 103
Target Start/End: Original strand, 10648105 - 10648167
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatcca---acatcttatatgatat 103  Q
    |||||||||||||||||| ||||||| || ||||||| |||| |   ||||||||||||||||    
T  10648105 tatgaaaatttgatattttaaaaataatcatcgagacaaatctaaggacatcttatatgatat 10648167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 88
Target Start/End: Original strand, 13971665 - 13971709
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatccaa 88  Q
    |||||||||||||||||| ||||||| || |||| ||||||||||    
T  13971665 tatgaaaatttgatattttaaaaataatcatcgaaacgaatccaa 13971709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 103
Target Start/End: Complemental strand, 23393393 - 23393331
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatc---caacatcttatatgatat 103  Q
    ||||||||||||||||||  |||||| || ||||||||||||   | ||||||||||||||||    
T  23393393 tatgaaaatttgatattttgaaaatactcatcgagacgaatctaacgacatcttatatgatat 23393331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 90
Target Start/End: Original strand, 26262032 - 26262068
Alignment:
Q  54 tgatatttaaaaaatattcgtcgagacgaatccaaca 90  Q
    |||||||| |||||||||||| |||||||||||||||    
T  26262032 tgatattttaaaaatattcgttgagacgaatccaaca 26262068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 103
Target Start/End: Complemental strand, 27462895 - 27462837
Alignment:
Q  48 aaaatttgatatttaaaaaatattcgtcgagacgaatcca---acatcttatatgatat 103  Q
    ||||||||||||||  ||||||||| ||||||||||| ||   ||||||||||||||||    
T  27462895 aaaatttgatattttgaaaatattcatcgagacgaatgcagcgacatcttatatgatat 27462837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 103
Target Start/End: Original strand, 31932085 - 31932147
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatccaa---catcttatatgatat 103  Q
    ||||||||||||||||||  |||||| || |||||||||||| ||   |||||||||||||||    
T  31932085 tatgaaaatttgatattttgaaaatactcatcgagacgaatctaacggcatcttatatgatat 31932147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 88
Target Start/End: Original strand, 32565850 - 32565890
Alignment:
Q  48 aaaatttgatatttaaaaaatattcgtcgagacgaatccaa 88  Q
    ||||||| |||||| |||||||||| |||||||||||||||    
T  32565850 aaaatttaatattttaaaaatattcatcgagacgaatccaa 32565890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 92
Target Start/End: Complemental strand, 32834948 - 32834904
Alignment:
Q  48 aaaatttgatatttaaaaaatattcgtcgagacgaatccaacatc 92  Q
    ||||||||||||||  ||||||||| |||||| ||||||||||||    
T  32834948 aaaatttgatattttgaaaatattcatcgagaagaatccaacatc 32834904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 190
Target Start/End: Complemental strand, 43891447 - 43891399
Alignment:
Q  143 aatacatatttttaaattgggtcatttaaaaagggac-gagggagtata 190  Q
    |||||| |||||||||||||||||| ||||| ||||| |||||||||||    
T  43891447 aatacacatttttaaattgggtcatgtaaaatgggacagagggagtata 43891399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 103
Target Start/End: Complemental strand, 44741504 - 44741442
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatc---caacatcttatatgatat 103  Q
    ||||||||||||||||||  |||||| || ||||||||||||   | ||||||||||||||||    
T  44741504 tatgaaaatttgatattttgaaaatactcatcgagacgaatctaacgacatcttatatgatat 44741442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 103
Target Start/End: Original strand, 50295843 - 50295905
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatc---caacatcttatatgatat 103  Q
    |||| |||||| |||||| |||||||||  ||||||||||||   ||||||||||||||||||    
T  50295843 tatggaaatttaatattttaaaaatattaatcgagacgaatctaacaacatcttatatgatat 50295905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 103
Target Start/End: Original strand, 51924877 - 51924939
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatc---caacatcttatatgatat 103  Q
    ||||||||||| ||||||  ||||||||| | ||||||||||   ||||||||||||||||||    
T  51924877 tatgaaaatttaatattttgaaaatattcattgagacgaatccaacaacatcttatatgatat 51924939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 103
Target Start/End: Complemental strand, 52688692 - 52688630
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatc---caacatcttatatgatat 103  Q
    ||||||||||||||||||  |||||| || ||||||||||||   | ||||||||||||||||    
T  52688692 tatgaaaatttgatattttgaaaatactcatcgagacgaatctaacgacatcttatatgatat 52688630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 103
Target Start/End: Complemental strand, 52749442 - 52749380
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatc---caacatcttatatgatat 103  Q
    ||||||||||||||||||  |||||| || ||||||||||||   | ||||||||||||||||    
T  52749442 tatgaaaatttgatattttgaaaatactcatcgagacgaatctaacgacatcttatatgatat 52749380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0687 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0687
Description:

Target: scaffold0687; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 44 - 103
Target Start/End: Complemental strand, 1147 - 1088
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatccaacatcttatatgatat 103  Q
    ||||||||||| ||||||  ||||||||| ||||||||||||||||||||||||||||||    
T  1147 tatgaaaatttaatattttgaaaatattcttcgagacgaatccaacatcttatatgatat 1088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 44; Significance: 4e-16; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 44 - 103
Target Start/End: Original strand, 17417624 - 17417683
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatccaacatcttatatgatat 103  Q
    ||||||||||| |||||| |||||||||  ||||||||||||||||||||||||||||||    
T  17417624 tatgaaaatttaatattttaaaaatattgatcgagacgaatccaacatcttatatgatat 17417683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 44 - 103
Target Start/End: Original strand, 6142414 - 6142476
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatc---caacatcttatatgatat 103  Q
    |||||||||||||||||| |||||||||| ||||||||||||   | ||||||||||||||||    
T  6142414 tatgaaaatttgatattttaaaaatattcatcgagacgaatctaacgacatcttatatgatat 6142476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 3 - 90
Target Start/End: Complemental strand, 26210950 - 26210862
Alignment:
Q  3 aattttgaacttaaatatctttaatattctattnnnnnnnnt-atgaaaatttgatatttaaaaaatattcgtcgagacgaatccaaca 90  Q
    |||||||||||||||||||||||||| | ||||        | |||||||||||||||||  ||||||||| |||||||||||||||||    
T  26210950 aattttgaacttaaatatctttaataatatattagaaaaaattatgaaaatttgatattttgaaaatattcatcgagacgaatccaaca 26210862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 44 - 90
Target Start/End: Complemental strand, 13207114 - 13207068
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatccaaca 90  Q
    ||||||||||| |||||| |||||||||| |||||||||||||||||    
T  13207114 tatgaaaattttatattttaaaaatattcatcgagacgaatccaaca 13207068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 44 - 90
Target Start/End: Original strand, 33121642 - 33121688
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatccaaca 90  Q
    ||||||||||| |||||| |||||||||| |||||||||||||||||    
T  33121642 tatgaaaatttaatattttaaaaatattcatcgagacgaatccaaca 33121688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 103
Target Start/End: Complemental strand, 995724 - 995662
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatc---caacatcttatatgatat 103  Q
    |||||||||||||||||| ||||||| || ||||||||||||   | ||||||||||||||||    
T  995724 tatgaaaatttgatattttaaaaatactcatcgagacgaatctaacgacatcttatatgatat 995662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 103
Target Start/End: Complemental strand, 10105972 - 10105910
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatc---caacatcttatatgatat 103  Q
    ||||||||||||||||||  ||||||||| ||||||||||||   | ||||||||||||||||    
T  10105972 tatgaaaatttgatattttgaaaatattcatcgagacgaatctaacgacatcttatatgatat 10105910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 103
Target Start/End: Original strand, 32541384 - 32541446
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatc---caacatcttatatgatat 103  Q
    |||||||||||||||||| ||||||| || ||||||||||||   | ||||||||||||||||    
T  32541384 tatgaaaatttgatattttaaaaatactcatcgagacgaatctaacgacatcttatatgatat 32541446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 44 - 103
Target Start/End: Original strand, 12869324 - 12869383
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatccaacatcttatatgatat 103  Q
    ||||||||||| | ||||  ||||||||| ||||||||||| |||||| |||||||||||    
T  12869324 tatgaaaatttaaaattttgaaaatattcatcgagacgaattcaacattttatatgatat 12869383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 90
Target Start/End: Complemental strand, 643588 - 643546
Alignment:
Q  48 aaaatttgatatttaaaaaatattcgtcgagacgaatccaaca 90  Q
    ||||||| |||||| |||||||||| |||||||||||||||||    
T  643588 aaaatttaatattttaaaaatattcatcgagacgaatccaaca 643546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 90
Target Start/End: Original strand, 18992007 - 18992049
Alignment:
Q  48 aaaatttgatatttaaaaaatattcgtcgagacgaatccaaca 90  Q
    ||||||| |||||| |||||||||| |||||||||||||||||    
T  18992007 aaaatttaatattttaaaaatattcatcgagacgaatccaaca 18992049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 86
Target Start/End: Original strand, 18998587 - 18998629
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatcc 86  Q
    ||||||||||| |||||| |||||||||| |||||||||||||    
T  18998587 tatgaaaatttaatatttgaaaaatattcatcgagacgaatcc 18998629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 171
Target Start/End: Complemental strand, 26210830 - 26210764
Alignment:
Q  106 attagtagaaaa-tagagtcaaaacatgttatatgaacaatacatatttttaaattgggtcatttaa 171  Q
    |||||||||||| ||  |||||| ||||||||| ||||||||  |||||||||||| ||||||||||    
T  26210830 attagtagaaaaataaggtcaaatcatgttatacgaacaatatgtatttttaaattaggtcatttaa 26210764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 89
Target Start/End: Original strand, 17179306 - 17179350
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatccaac 89  Q
    |||||||||||||||||| |||| ||||| ||||||||||||||||    
T  17179306 tatgaaaatttgatatttgaaaa-tattcatcgagacgaatccaac 17179350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 101 - 173
Target Start/End: Complemental strand, 26240843 - 26240770
Alignment:
Q  101 tatatattagtagaaaa-tagagtcaaaacatgttatatgaacaatacatatttttaaattgggtcatttaaaa 173  Q
    ||||||||||||||||| ||  |||||||||| ||||||||||| |  | ||||||||| | ||||||||||||    
T  26240843 tatatattagtagaaaaataaggtcaaaacatattatatgaacattgaagatttttaaaataggtcatttaaaa 26240770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 103
Target Start/End: Complemental strand, 2141729 - 2141667
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatc---caacatcttatatgatat 103  Q
    ||||||||||||||||||  |||||| || ||||||||||||   | ||||||||||||||||    
T  2141729 tatgaaaatttgatattttgaaaatactcatcgagacgaatctaacgacatcttatatgatat 2141667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 103
Target Start/End: Complemental strand, 2397931 - 2397869
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatc---caacatcttatatgatat 103  Q
    ||||||||||||||||||  |||||| || ||||||||||||   | ||||||||||||||||    
T  2397931 tatgaaaatttgatattttgaaaatactcatcgagacgaatctaacgacatcttatatgatat 2397869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 103
Target Start/End: Original strand, 2656577 - 2656639
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatc---caacatcttatatgatat 103  Q
    ||||||||||||||||||  |||||| || ||||||||||||   | ||||||||||||||||    
T  2656577 tatgaaaatttgatattttgaaaatactcatcgagacgaatctaacgacatcttatatgatat 2656639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 103
Target Start/End: Original strand, 2667232 - 2667294
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatc---caacatcttatatgatat 103  Q
    ||||||||||||||||||  |||||| || ||||||||||||   | ||||||||||||||||    
T  2667232 tatgaaaatttgatattttgaaaatactcatcgagacgaatctaacgacatcttatatgatat 2667294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 190
Target Start/End: Complemental strand, 7632015 - 7631939
Alignment:
Q  114 aaaatagagtcaaaacatgttatatgaacaatacatatttttaaattgggtcatttaaaaagggacgagggagtata 190  Q
    |||||| ||||||| ||||||||||||||| || ||||||| ||| | |||| |||||||  |||||  ||||||||    
T  7632015 aaaataaagtcaaagcatgttatatgaacattatatattttcaaactaggtcgtttaaaataggacggaggagtata 7631939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 103
Target Start/End: Complemental strand, 9023001 - 9022939
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatc---caacatcttatatgatat 103  Q
    ||||||||||||||||||  |||||| || ||||||||||||   | ||||||||||||||||    
T  9023001 tatgaaaatttgatattttgaaaatactcatcgagacgaatctaacgacatcttatatgatat 9022939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 96
Target Start/End: Complemental strand, 11973504 - 11973452
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatccaacatcttat 96  Q
    |||||||| ||| ||||| |||||||||  |||||||||||||||||| ||||    
T  11973504 tatgaaaaattggtattttaaaaatattaatcgagacgaatccaacattttat 11973452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 103
Target Start/End: Complemental strand, 24825326 - 24825264
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatc---caacatcttatatgatat 103  Q
    ||||||||||||||||||  |||||| || ||||||||||||   | ||||||||||||||||    
T  24825326 tatgaaaatttgatattttgaaaatactcatcgagacgaatctaacgacatcttatatgatat 24825264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 103
Target Start/End: Complemental strand, 28483198 - 28483136
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatc---caacatcttatatgatat 103  Q
    ||||||||||||||||||  |||||| || ||||||||||||   | ||||||||||||||||    
T  28483198 tatgaaaatttgatattttgaaaatactcatcgagacgaatctaacgacatcttatatgatat 28483136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 103
Target Start/End: Original strand, 29514933 - 29514995
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatc---caacatcttatatgatat 103  Q
    ||||||||||||||||||  |||||| || ||||||||||||   | ||||||||||||||||    
T  29514933 tatgaaaatttgatattttgaaaatactcatcgagacgaatctaacgacatcttatatgatat 29514995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 103
Target Start/End: Complemental strand, 29795611 - 29795549
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatc---caacatcttatatgatat 103  Q
    ||||||||||||||||||  |||||| || ||||||||||||   | ||||||||||||||||    
T  29795611 tatgaaaatttgatattttgaaaatactcatcgagacgaatctaacgacatcttatatgatat 29795549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 88
Target Start/End: Original strand, 30237271 - 30237311
Alignment:
Q  48 aaaatttgatatttaaaaaatattcgtcgagacgaatccaa 88  Q
    ||||||| |||||| |||||||||| |||||||||||||||    
T  30237271 aaaatttaatattttaaaaatattcatcgagacgaatccaa 30237311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 103
Target Start/End: Complemental strand, 30699422 - 30699360
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatc---caacatcttatatgatat 103  Q
    ||||||||||||||||||  |||||| || ||||||||||||   | ||||||||||||||||    
T  30699422 tatgaaaatttgatattttgaaaatactcatcgagacgaatctaacgacatcttatatgatat 30699360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 103
Target Start/End: Complemental strand, 32673909 - 32673847
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatc---caacatcttatatgatat 103  Q
    ||||||||||||||||||  |||||| || ||||||||||||   | ||||||||||||||||    
T  32673909 tatgaaaatttgatattttgaaaatactcatcgagacgaatctaacgacatcttatatgatat 32673847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 44 - 103
Target Start/End: Original strand, 33613316 - 33613375
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatccaacatcttatatgatat 103  Q
    ||||||||||| |||||| |||||||||| ||||||||||| |||||||||| |||||||    
T  33613316 tatgaaaatttaatattttaaaaatattcatcgagacgaattcaacatcttacatgatat 33613375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 44 - 103
Target Start/End: Complemental strand, 38069212 - 38069150
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatc---caacatcttatatgatat 103  Q
    |||||||||||||||||| |||||||||| ||||||||||||   | ||||||||||||||||    
T  38069212 tatgaaaatttgatattttaaaaatattcatcgagacgaatctaacgacatcttatatgatat 38069150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 44 - 103
Target Start/End: Complemental strand, 47841232 - 47841173
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatccaacatcttatatgatat 103  Q
    ||||||||||| || |||  ||||||||  ||||||||||||||||||||||||||||||    
T  47841232 tatgaaaatttaatgttttgaaaatattgttcgagacgaatccaacatcttatatgatat 47841173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 44 - 90
Target Start/End: Complemental strand, 18795301 - 18795255
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatccaaca 90  Q
    ||||||||||| |||||| |||||||||| |||||||||||||||||    
T  18795301 tatgaaaatttaatattttaaaaatattcatcgagacgaatccaaca 18795255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 44 - 90
Target Start/End: Complemental strand, 44389447 - 44389401
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatccaaca 90  Q
    ||||||||||| |||||| |||||||||| |||||||||||||||||    
T  44389447 tatgaaaatttaatattttaaaaatattcatcgagacgaatccaaca 44389401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 44 - 90
Target Start/End: Original strand, 46657733 - 46657779
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatccaaca 90  Q
    ||||||||||| |||||| |||||||||| |||||||||||||||||    
T  46657733 tatgaaaatttaatattttaaaaatattcatcgagacgaatccaaca 46657779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 46 - 103
Target Start/End: Original strand, 40348512 - 40348569
Alignment:
Q  46 tgaaaatttgatatttaaaaaatattcgtcgagacgaatccaacatcttatatgatat 103  Q
    ||||||||| ||||||  ||||||||  || |||||||||||||||||||||||||||    
T  40348512 tgaaaatttaatattttgaaaatattaatctagacgaatccaacatcttatatgatat 40348569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 103
Target Start/End: Original strand, 7313005 - 7313063
Alignment:
Q  48 aaaatttgatatttaaaaaatattcgtcgagacgaatccaac---atcttatatgatat 103  Q
    ||||||||||||||  ||||||||| ||||||||||||||||   ||||||||||||||    
T  7313005 aaaatttgatattttgaaaatattcatcgagacgaatccaacgatatcttatatgatat 7313063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 103
Target Start/End: Complemental strand, 23734327 - 23734269
Alignment:
Q  48 aaaatttgatatttaaaaaatattcgtcgagacgaatccaac---atcttatatgatat 103  Q
    |||||||||||||| |||||||||| ||||||||||| ||||   ||||||||||||||    
T  23734327 aaaatttgatattttaaaaatattcatcgagacgaattcaacgatatcttatatgatat 23734269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 103
Target Start/End: Complemental strand, 28016276 - 28016214
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatc---caacatcttatatgatat 103  Q
    |||||||||||||||||| ||||||||||  ||||||| |||   ||||||||||||||||||    
T  28016276 tatgaaaatttgatattttaaaaatattcaacgagacgtatctaacaacatcttatatgatat 28016214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 103
Target Start/End: Original strand, 35693733 - 35693795
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatc---caacatcttatatgatat 103  Q
    |||||||||||||||||| ||||||| || ||||||||||||   | ||||||||||||||||    
T  35693733 tatgaaaatttgatattttaaaaatactcatcgagacgaatctaacgacatcttatatgatat 35693795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 103
Target Start/End: Original strand, 38198581 - 38198643
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatc---caacatcttatatgatat 103  Q
    ||||||||||| |||||| |||||||||  ||||||||||||   ||||||||||||||||||    
T  38198581 tatgaaaatttaatatttgaaaaatattaatcgagacgaatccaacaacatcttatatgatat 38198643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 44 - 103
Target Start/End: Complemental strand, 3680506 - 3680447
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatccaacatcttatatgatat 103  Q
    ||||||||||| ||||||  ||| ||||  |||| |||||||||||||||||||||||||    
T  3680506 tatgaaaatttcatattttgaaagtatttatcgaaacgaatccaacatcttatatgatat 3680447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 44 - 103
Target Start/End: Original strand, 4033391 - 4033450
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatccaacatcttatatgatat 103  Q
    |||||||||||  |||||  ||||||||| || |||||||||||||||||||||| ||||    
T  4033391 tatgaaaatttagtattttgaaaatattcatcaagacgaatccaacatcttatataatat 4033450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 95
Target Start/End: Original strand, 5309217 - 5309260
Alignment:
Q  52 tttgatatttaaaaaatattcgtcgagacgaatccaacatctta 95  Q
    |||||||||| |||||||||  ||||||||||||||||||||||    
T  5309217 tttgatattttaaaaatatttatcgagacgaatccaacatctta 5309260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 103
Target Start/End: Complemental strand, 19327475 - 19327414
Alignment:
Q  45 atgaaaatttgatatttaaaaaatattcgtcgagacgaatccaac---atcttatatgatat 103  Q
    ||||||||||||||||| ||||||| || |||||||||||| |||   ||||||||||||||    
T  19327475 atgaaaatttgatattttaaaaatactcatcgagacgaatctaacgatatcttatatgatat 19327414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 103
Target Start/End: Complemental strand, 28185565 - 28185510
Alignment:
Q  48 aaaatttgatatttaaaaaatattcgtcgagacgaatccaacatcttatatgatat 103  Q
    ||||||| |||||| ||||||| || |||||| ||||||||||||||| |||||||    
T  28185565 aaaatttaatattttaaaaatactcatcgagatgaatccaacatcttacatgatat 28185510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 103
Target Start/End: Complemental strand, 5842276 - 5842216
Alignment:
Q  46 tgaaaatttgatatttaaaaaatattcgtcgagacgaatc---caacatcttatatgatat 103  Q
    ||||||||||||||||  ||||||||| ||||||||||||   | ||||||||||||||||    
T  5842276 tgaaaatttgatattttgaaaatattcatcgagacgaatctaacgacatcttatatgatat 5842216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 90
Target Start/End: Complemental strand, 26203223 - 26203177
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatccaaca 90  Q
    ||||||||||| ||||||  ||||||||| |||||||||||||||||    
T  26203223 tatgaaaatttaatatttttaaaatattcatcgagacgaatccaaca 26203177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 90
Target Start/End: Complemental strand, 29770635 - 29770589
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatccaaca 90  Q
    ||||||||||| |||||| |||||||||| |||||| ||||||||||    
T  29770635 tatgaaaatttaatattttaaaaatattcatcgagaagaatccaaca 29770589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 90
Target Start/End: Complemental strand, 31466515 - 31466473
Alignment:
Q  48 aaaatttgatatttaaaaaatattcgtcgagacgaatccaaca 90  Q
    ||||||| |||||| |||||||||| |||||||||||||||||    
T  31466515 aaaatttaatattttaaaaatattcatcgagacgaatccaaca 31466473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 90
Target Start/End: Complemental strand, 31497865 - 31497819
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatccaaca 90  Q
    ||||||||||| |||||| |||||||||| ||||||| |||||||||    
T  31497865 tatgaaaatttaatattttaaaaatattcatcgagaccaatccaaca 31497819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 90
Target Start/End: Complemental strand, 42493678 - 42493632
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatccaaca 90  Q
    ||||||||||| |||||| |||||||||| ||||||||||| |||||    
T  42493678 tatgaaaatttaatattttaaaaatattcatcgagacgaattcaaca 42493632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 90
Target Start/End: Complemental strand, 42834449 - 42834407
Alignment:
Q  48 aaaatttgatatttaaaaaatattcgtcgagacgaatccaaca 90  Q
    ||||||| |||||| |||||||||| |||||||||||||||||    
T  42834449 aaaatttaatattttaaaaatattcatcgagacgaatccaaca 42834407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 90
Target Start/End: Original strand, 47538027 - 47538069
Alignment:
Q  48 aaaatttgatatttaaaaaatattcgtcgagacgaatccaaca 90  Q
    ||||||| |||||| |||||||||| |||||||||||||||||    
T  47538027 aaaatttaatattttaaaaatattcatcgagacgaatccaaca 47538069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 90
Target Start/End: Original strand, 48531426 - 48531468
Alignment:
Q  48 aaaatttgatatttaaaaaatattcgtcgagacgaatccaaca 90  Q
    ||||||| |||||| |||||||||| |||||||||||||||||    
T  48531426 aaaatttaatattttaaaaatattcatcgagacgaatccaaca 48531468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 85
Target Start/End: Original strand, 25273920 - 25273961
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatc 85  Q
    |||||||||||||||||| ||||||| || ||||||||||||    
T  25273920 tatgaaaatttgatattttaaaaatactcatcgagacgaatc 25273961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 103
Target Start/End: Original strand, 9173239 - 9173301
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatc---caacatcttatatgatat 103  Q
    ||||||||||||||||||  |||||| || ||||||||||||   | ||||||||||||||||    
T  9173239 tatgaaaatttgatattttgaaaatactcatcgagacgaatctaacgacatcttatatgatat 9173301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 103
Target Start/End: Complemental strand, 19817496 - 19817434
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatc---caacatcttatatgatat 103  Q
    ||||||||||||||||||  |||||| || ||||||| ||||   ||||||||||||||||||    
T  19817496 tatgaaaatttgatattttgaaaatactcatcgagacaaatctaacaacatcttatatgatat 19817434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 103
Target Start/End: Original strand, 21392122 - 21392180
Alignment:
Q  48 aaaatttgatatttaaaaaatattcgtcgagacgaatc---caacatcttatatgatat 103  Q
    ||||||| |||||| |||||||||| ||||||||||||   |||||||||| |||||||    
T  21392122 aaaatttaatattttaaaaatattcatcgagacgaatctaacaacatcttacatgatat 21392180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 103
Target Start/End: Original strand, 27248752 - 27248810
Alignment:
Q  48 aaaatttgatatttaaaaaatattcgtcgagacgaatccaac---atcttatatgatat 103  Q
    ||||||||||||||  ||||||||  ||||||||||||||||   ||||||||||||||    
T  27248752 aaaatttgatattttgaaaatatttatcgagacgaatccaacaatatcttatatgatat 27248810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 103
Target Start/End: Complemental strand, 29247788 - 29247726
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatc---caacatcttatatgatat 103  Q
    ||||||||||||||||||  |||||| || ||||||||||||   | ||||||||||||||||    
T  29247788 tatgaaaatttgatattttgaaaatactcatcgagacgaatctaacgacatcttatatgatat 29247726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 103
Target Start/End: Original strand, 30462124 - 30462186
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatc---caacatcttatatgatat 103  Q
    ||||||||||||||||||  ||||||||| | ||||||||||   | ||||||||||||||||    
T  30462124 tatgaaaatttgatattttgaaaatattcattgagacgaatctaacgacatcttatatgatat 30462186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 103
Target Start/End: Original strand, 31496548 - 31496610
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatc---caacatcttatatgatat 103  Q
    ||||||||||||||||||  |||||| || ||||||||||||   | ||||||||||||||||    
T  31496548 tatgaaaatttgatattttgaaaatagtcatcgagacgaatctaacgacatcttatatgatat 31496610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 103
Target Start/End: Original strand, 35265724 - 35265786
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatc---caacatcttatatgatat 103  Q
    ||||||||||||||||||  |||||| || ||||||||||||   | ||||||||||||||||    
T  35265724 tatgaaaatttgatattttgaaaatactcatcgagacgaatctaacgacatcttatatgatat 35265786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 103
Target Start/End: Original strand, 38353501 - 38353563
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatc---caacatcttatatgatat 103  Q
    ||||||||||| |||||| ||||||| || ||||||||||||   | ||||||||||||||||    
T  38353501 tatgaaaattttatattttaaaaatactcatcgagacgaatctaacgacatcttatatgatat 38353563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 103
Target Start/End: Complemental strand, 40232089 - 40232027
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatc---caacatcttatatgatat 103  Q
    ||||||||||||||||||  |||||| || ||||||||||||   | ||||||||||||||||    
T  40232089 tatgaaaatttgatattttgaaaatactcatcgagacgaatctaacgacatcttatatgatat 40232027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0340 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 56 - 98
Target Start/End: Original strand, 14453 - 14495
Alignment:
Q  56 atatttaaaaaatattcgtcgagacgaatccaacatcttatat 98  Q
    |||||| |||||||||| |||||||||||||||||||||||||    
T  14453 atattttaaaaatattcatcgagacgaatccaacatcttatat 14495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 105
Target Start/End: Original strand, 7450 - 7511
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatccaacatcttatatgatatat 105  Q
    |||||||| ||| ||||| |||||||||  |||||||||||||||||| ||||||| |||||    
T  7450 tatgaaaaattggtattttaaaaatattaatcgagacgaatccaacattttatatgctatat 7511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0373 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0373
Description:

Target: scaffold0373; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 103
Target Start/End: Complemental strand, 7041 - 6983
Alignment:
Q  48 aaaatttgatatttaaaaaatattcgtcgagacgaatcca---acatcttatatgatat 103  Q
    ||||||||||||||  ||||||||| ||||||||||||||   ||||||||||||||||    
T  7041 aaaatttgatattttgaaaatattcatcgagacgaatccaacgacatcttatatgatat 6983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 90
Target Start/End: Complemental strand, 15373 - 15331
Alignment:
Q  48 aaaatttgatatttaaaaaatattcgtcgagacgaatccaaca 90  Q
    ||||||| |||||| |||||||||| |||||||||||||||||    
T  15373 aaaatttaatattttaaaaatattcatcgagacgaatccaaca 15331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 103
Target Start/End: Complemental strand, 2257 - 2195
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatc---caacatcttatatgatat 103  Q
    ||||||||||| |||||| |||||||||| || |||||||||   ||||||||||||| ||||    
T  2257 tatgaaaatttaatatttgaaaaatattcatcaagacgaatcctacaacatcttatattatat 2195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0196 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0196
Description:

Target: scaffold0196; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 105
Target Start/End: Complemental strand, 26391 - 26330
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatccaacatcttatatgatatat 105  Q
    |||||||| ||| ||||| |||||||||  |||||||||||||||||| || |||| |||||    
T  26391 tatgaaaaattggtattttaaaaatattaatcgagacgaatccaacattttttatgctatat 26330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 103
Target Start/End: Complemental strand, 5537 - 5475
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatc---caacatcttatatgatat 103  Q
    ||||||||||||||||||  |||||| || ||||||||||||   | ||||||||||||||||    
T  5537 tatgaaaatttgatattttgaaaatactcatcgagacgaatctaacgacatcttatatgatat 5475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 88
Target Start/End: Complemental strand, 38521 - 38477
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatccaa 88  Q
    ||||||||||| |||||| |||||||||| ||||||| |||||||    
T  38521 tatgaaaatttaatattttaaaaatattcatcgagacaaatccaa 38477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 103
Target Start/End: Original strand, 25240 - 25302
Alignment:
Q  44 tatgaaaatttgatatttaaaaaatattcgtcgagacgaatc---caacatcttatatgatat 103  Q
    ||||||||||| |||||| |||||||||  ||||||||||||    |||||||||||||||||    
T  25240 tatgaaaatttaatattttaaaaatattaatcgagacgaatcaaagaacatcttatatgatat 25302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University