View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3428_high_15 (Length: 260)
Name: NF3428_high_15
Description: NF3428
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3428_high_15 |
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Alignment Details
Target: chr1 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 19 - 253
Target Start/End: Complemental strand, 7472819 - 7472585
Alignment:
| Q |
19 |
gttggattcctacttctactgaccacatcatcaatgctgaaaaacgtcttctttctcttgtcaagtaattatttcattatgggtttgttttaatttcatt |
118 |
Q |
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| T |
7472819 |
gttggattcctacttctactgaccacatcatcaatgctgaaaaacgtcttctttctcttgtcaagtaattatttcattatgggtttgttttaatttcatt |
7472720 |
T |
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| Q |
119 |
attttagctttatcttatgaaaacaataccttatcacatgtttaagctatgaaaatagcttattgcttgaaaaataatttaactttactgtagttttggt |
218 |
Q |
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| T |
7472719 |
attttagctttatcttatgaaaacaataccttatcacatgtttaagctatgaaaatagcttattgcttgaaaaataatttaactttactgtagttttggt |
7472620 |
T |
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| Q |
219 |
atacaaatagattataatgataagggcctatgcta |
253 |
Q |
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||||||||||||||| ||||||||||| ||||||| |
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| T |
7472619 |
atacaaatagattatcatgataagggcttatgcta |
7472585 |
T |
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