View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3429_high_6 (Length: 253)

Name: NF3429_high_6
Description: NF3429
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3429_high_6
NF3429_high_6
[»] chr7 (7 HSPs)
chr7 (7-253)||(1716511-1716758)
chr7 (13-126)||(7961783-7961896)
chr7 (7-171)||(1345108-1345274)
chr7 (41-130)||(11269991-11270080)
chr7 (59-130)||(36207996-36208067)
chr7 (180-253)||(8375765-8375840)
chr7 (13-66)||(1103164-1103217)
[»] chr4 (10 HSPs)
chr4 (11-156)||(10395967-10396112)
chr4 (13-205)||(53472474-53472663)
chr4 (13-253)||(53469528-53469776)
chr4 (14-132)||(29235126-29235244)
chr4 (13-126)||(27272577-27272691)
chr4 (7-130)||(13816943-13817066)
chr4 (7-134)||(50887401-50887527)
chr4 (24-120)||(32015180-32015276)
chr4 (46-211)||(9010328-9010501)
chr4 (168-253)||(32015318-32015401)
[»] chr3 (4 HSPs)
chr3 (11-195)||(31141408-31141590)
chr3 (19-163)||(30046432-30046574)
chr3 (41-124)||(25889658-25889741)
chr3 (13-123)||(37133784-37133894)
[»] chr6 (14 HSPs)
chr6 (13-253)||(16909979-16910219)
chr6 (7-163)||(11681427-11681587)
chr6 (13-126)||(2921852-2921965)
chr6 (22-126)||(13556014-13556118)
chr6 (15-125)||(11677130-11677240)
chr6 (13-126)||(13557985-13558098)
chr6 (13-126)||(2923168-2923282)
chr6 (41-103)||(22880002-22880064)
chr6 (143-253)||(22258479-22258590)
chr6 (13-126)||(16403530-16403643)
chr6 (41-103)||(22898117-22898179)
chr6 (13-126)||(27340615-27340726)
chr6 (13-126)||(27401355-27401466)
chr6 (100-163)||(15921058-15921121)
[»] chr1 (8 HSPs)
chr1 (13-126)||(22840975-22841088)
chr1 (15-106)||(24272755-24272846)
chr1 (13-126)||(22827037-22827150)
chr1 (11-130)||(24284827-24284946)
chr1 (18-126)||(22826642-22826750)
chr1 (55-134)||(20260947-20261026)
chr1 (143-253)||(12466089-12466200)
chr1 (46-126)||(12458584-12458664)
[»] chr5 (3 HSPs)
chr5 (13-137)||(19670676-19670800)
chr5 (11-113)||(26896584-26896686)
chr5 (13-123)||(32795543-32795653)
[»] chr2 (5 HSPs)
chr2 (22-163)||(25550094-25550234)
chr2 (13-130)||(8761178-8761296)
chr2 (11-90)||(10128505-10128584)
chr2 (13-97)||(37965519-37965604)
chr2 (111-211)||(37965205-37965304)
[»] chr8 (2 HSPs)
chr8 (46-126)||(42001907-42001987)
chr8 (13-90)||(33897216-33897293)
[»] scaffold0065 (1 HSPs)
scaffold0065 (80-130)||(34766-34816)
[»] scaffold0007 (1 HSPs)
scaffold0007 (15-88)||(260213-260286)


Alignment Details
Target: chr7 (Bit Score: 196; Significance: 1e-107; HSPs: 7)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 7 - 253
Target Start/End: Complemental strand, 1716758 - 1716511
Alignment:
Q  7 tcgaagaatatgaaaaaatatgcaaagacttgaccatagaaataaaggtcttgtgtgttaatatttcttgcatcaatagttagtgagtttttctatagct 106  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  1716758 tcgaagaatatgaaaaaatatgtaaagacttgaccatataaataaaggtcttgtgtgttaatatttcttgcatcaatagttagtgagtttttttatagct 1716659  T
Q  107 agtattacctctactattcagtatatgtgataatcgattatagtggaattcttttcaataactctacctgagaattagtcaacacattgttggataccac 206  Q
     ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||| ||    
T  1716658 ggtattacctctactattcagtatatatgataatcgattatagtggaattcttttcaataactctacccgaaaattagtcaacacattgttggatactac 1716559  T
Q  207 gtt-aattttatattatttttattctgtcttttactattattgtcatt 253  Q
    ||| ||| |||| | |||||||||||||||||||||||||||||||||    
T  1716558 gttaaatcttatgtcatttttattctgtcttttactattattgtcatt 1716511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 13 - 126
Target Start/End: Original strand, 7961783 - 7961896
Alignment:
Q  13 aatatgaaaaaatatgcaaagacttgaccatagaaataaaggtcttgtgtgttaatatttcttgcatcaatagttagtgagtttttctatagctagtatt 112  Q
    |||||||| ||||||||||||  |||  |||| ||||||| | ||||||||||| ||||||||||| |||||||||||| ||||| |||||||||| |||    
T  7961783 aatatgaagaaatatgcaaaggtttggtcatataaataaaagccttgtgtgttagtatttcttgcaccaatagttagtgggttttgctatagctagcatt 7961882  T
Q  113 acctctactattca 126  Q
    || |||||||||||    
T  7961883 acttctactattca 7961896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 7 - 171
Target Start/End: Original strand, 1345108 - 1345274
Alignment:
Q  7 tcgaagaatatgaaaaaatatgcaaagacttgaccatagaaataaaggtcttgtgtgttaatatttcttgcatc---aatagttagtgagtttttctata 103  Q
    |||||||||| ||| ||||||| || ||||||| |||| |||||||| |||||||||||| ||||||    ||    ||||||||  |||| || ||||     
T  1345108 tcgaagaataagaagaaatatgtaa-gacttgatcatataaataaagatcttgtgtgttagtatttcaccaatagttaatagttaacgagtcttgctatt 1345206  T
Q  104 gctagtattacctctactattcagtatatgtgataatcgattatagtggaattcttttcaataactct 171  Q
    |||  |||||| ||||||||||||||||||| || ||||||||||||| |||| |||||||| |||||    
T  1345207 gctgatattacttctactattcagtatatgtaatcatcgattatagtgtaatttttttcaatgactct 1345274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 41 - 130
Target Start/End: Original strand, 11269991 - 11270080
Alignment:
Q  41 catagaaataaaggtcttgtgtgttaatatttcttgcatcaatagttagtgagtttttctatagctagtattacctctactattcagtat 130  Q
    |||| ||||||| | ||||||||||| ||||  ||||| |||||||||||| ||||| ||||| ||||| ||||||||||||||||||||    
T  11269991 catataaataaaagccttgtgtgttagtattagttgcaccaatagttagtgggttttgctataactagtgttacctctactattcagtat 11270080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 59 - 130
Target Start/End: Original strand, 36207996 - 36208067
Alignment:
Q  59 gtgtgttaatatttcttgcatcaatagttagtgagtttttctatagctagtattacctctactattcagtat 130  Q
    |||||||| ||||||||||| |||||||||||| ||||| ||||||||||  ||| |||||||||| |||||    
T  36207996 gtgtgttagtatttcttgcaccaatagttagtgggttttgctatagctagcgttagctctactatttagtat 36208067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 180 - 253
Target Start/End: Complemental strand, 8375840 - 8375765
Alignment:
Q  180 attagtcaacacattgttggataccacgtt-aattttatattattttt-attctgtcttttactattattgtcatt 253  Q
    |||||||| ||||||| ||||||||||||| |||||| | | |||||| ||| ||||||||| |||||||||||||    
T  8375840 attagtcagcacattgctggataccacgttaaattttgtgtcatttttaattatgtcttttaatattattgtcatt 8375765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 13 - 66
Target Start/End: Original strand, 1103164 - 1103217
Alignment:
Q  13 aatatgaaaaaatatgcaaagacttgaccatagaaataaaggtcttgtgtgtta 66  Q
    |||||||| ||||||| ||||||||| ||||| ||||||| | |||||||||||    
T  1103164 aatatgaagaaatatgtaaagacttggccatataaataaaagccttgtgtgtta 1103217  T

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Target: chr4 (Bit Score: 74; Significance: 5e-34; HSPs: 10)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 11 - 156
Target Start/End: Original strand, 10395967 - 10396112
Alignment:
Q  11 agaatatgaaaaaatatgcaaagacttgaccatagaaataaaggtcttgtgtgttaatatttcttgcatcaatagttagtgagtttttctatagctagta 110  Q
    |||| ||||| ||||||||||||||| | ||||| ||||||| | ||||||||||| |||||||||||||||||||||||| ||| | |||||| | ||     
T  10395967 agaagatgaagaaatatgcaaagactcggccatataaataaaagccttgtgtgttagtatttcttgcatcaatagttagtgggttatgctatagatggtg 10396066  T
Q  111 ttacctctactattcagtatatgtgataatcgattatagtggaatt 156  Q
    || | ||||||||||||||| |||||| ||||||||||||||||||    
T  10396067 ttccttctactattcagtatctgtgattatcgattatagtggaatt 10396112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 13 - 205
Target Start/End: Complemental strand, 53472663 - 53472474
Alignment:
Q  13 aatatgaaaaaatatgcaaagacttgaccatagaaataaaggtcttgtgtgttaatatttcttgcatcaatagttagtgagtttttctatagctagtatt 112  Q
    |||| ||| ||||||||||||||||| ||||| ||||||| || |||||||||| |||||| |||| |||| ||||||| ||||| ||||||||||  ||    
T  53472663 aatacgaagaaatatgcaaagacttg-ccatataaataaaagt-ttgtgtgttagtatttcatgcaccaatggttagtgggttttgctatagctagcgtt 53472566  T
Q  113 acctctactattcagtatatgtgataatcgattatagtggaattcttttcaataactctacctgagaattagtcaacacattgttggatacca 205  Q
    |||||||||||||||||| ||| || |||||||||||| |||||||||| | |  |||| | || | ||||||||  ||||||||||||||||    
T  53472565 acctctactattcagtatctgtaattatcgattatagt-gaattctttttagtggctctgcttgtggattagtcagtacattgttggatacca 53472474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 13 - 253
Target Start/End: Complemental strand, 53469776 - 53469528
Alignment:
Q  13 aatatgaaaaaatatgcaaagacttgaccatagaaataaaggtcttgtgtgttaatatttcttgcatcaatagttagtgagtttttctatagctagtatt 112  Q
    |||||||| |||||||||||||||||  |||| ||||||| ||||||||||||| ||||||||| ||||||||||||||  |||| ||||||| | | ||    
T  53469776 aatatgaagaaatatgcaaagacttggtcatataaataaaagtcttgtgtgttagtatttcttgaatcaatagttagtggattttactatagccaatgtt 53469677  T
Q  113 acctctactattcagt-------atatgtgataatcgattatagtggaattcttttcaataactctacctgagaattagtcaacacattgttggatacca 205  Q
    |||| || ||||||||       |||||| || || |||||||||  |||||||||||||  |||| |  | | ||||||||  ||||||||||||||||    
T  53469676 acctatattattcagtatctgtaatatgtaattattgattatagt-aaattcttttcaatggctctgctcgtggattagtcattacattgttggatacca 53469578  T
Q  206 cgtt-aattttatattattttt-attctgtcttttactattattgtcatt 253  Q
    |||| |||||| | |  ||||| |||||||||||||| ||||||||||||    
T  53469577 cgttaaattttgtgtcgtttttcattctgtcttttaccattattgtcatt 53469528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 14 - 132
Target Start/End: Complemental strand, 29235244 - 29235126
Alignment:
Q  14 atatgaaaaaatatgcaaagacttgaccatagaaataaaggtcttgtgtgttaat-atttcttgcatcaatagttagtgagtttttctatagctagtatt 112  Q
    ||||||||||||||||||||||||| ||||| ||||||||| ||||||||||| | |||||||||| |||||||| ||| ||||| |||||| | |||||    
T  29235244 atatgaaaaaatatgcaaagacttggccatataaataaaggccttgtgtgttagtaatttcttgcaccaatagttcgtg-gttttgctatagttggtatt 29235146  T
Q  113 acctctactattcagtatat 132  Q
    || |||||||||||| ||||    
T  29235145 acatctactattcagcatat 29235126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 13 - 126
Target Start/End: Original strand, 27272577 - 27272691
Alignment:
Q  13 aatatgaaaaaatatgcaaagacttgaccatagaaataaaggtcttgtgtgttaatatttcttgcatcaatagttagtgagttttt-ctatagctagtat 111  Q
    |||||||| ||||||||||||  |||  |||| ||||||| ||||||||||||| ||||||||||| |||||||||||| |||||| |||||||||| ||    
T  27272577 aatatgaagaaatatgcaaaggtttggtcatataaataaaagtcttgtgtgttagtatttcttgcaccaatagttagtgggtttttgctatagctagcat 27272676  T
Q  112 tacctctactattca 126  Q
    ||| |||||||||||    
T  27272677 tacttctactattca 27272691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 7 - 130
Target Start/End: Original strand, 13816943 - 13817066
Alignment:
Q  7 tcgaagaatatgaaaaaatatgcaaagacttgaccatagaaataaaggtcttgtgtgttaatatttcttgcatcaatagttagtgagtttttctatagct 106  Q
    |||||||||||||| |||||||| ||||||||  |||| ||||||||  ||| ||||||| ||||||||| |  ||||||||||||||||| | ||||||    
T  13816943 tcgaagaatatgaagaaatatgcgaagacttggtcatataaataaagaccttatgtgttattatttcttgtacaaatagttagtgagttttgcgatagct 13817042  T
Q  107 agtattacctctactattcagtat 130  Q
    |||||| || || |||||||||||    
T  13817043 agtattgccactgctattcagtat 13817066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 7 - 134
Target Start/End: Complemental strand, 50887527 - 50887401
Alignment:
Q  7 tcgaagaatatgaaaaaatatgcaaagacttgaccatagaaataaaggtcttgtgtgttaatatttcttgcatcaatagttagtgagtttttctatagct 106  Q
    ||||| ||||||||||| ||||||||| |||| ||||| ||||||| |||||||| |||  | || ||| ||  ||||||||||| ||||| ||||||||    
T  50887527 tcgaataatatgaaaaa-tatgcaaaggcttggccatataaataaatgtcttgtgcgttggttttgcttacactaatagttagtgggttttgctatagct 50887429  T
Q  107 agtattacctctactattcagtatatgt 134  Q
    |||||||||||||||||| |||||||||    
T  50887428 agtattacctctactatttagtatatgt 50887401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 24 - 120
Target Start/End: Original strand, 32015180 - 32015276
Alignment:
Q  24 atatgcaaagacttgaccatagaaataaaggtcttgtgtgttaatatttcttgcatcaatagttagtgagtttttctatagctagtattacctctac 120  Q
    ||||||||||||||| | | | |||||||||| |||||||||| ||||||||||| |||||||||||| ||||| ||||||||  |||||| |||||    
T  32015180 atatgcaaagacttggcaacataaataaaggttttgtgtgttagtatttcttgcaccaatagttagtgggttttgctatagctgatattacatctac 32015276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 211
Target Start/End: Complemental strand, 9010501 - 9010328
Alignment:
Q  46 aaataaaggtcttgtgtgttaata-tttcttgcatcaatagttagtgagtttttctatagctagtattacctctactattcagtatatgtgata------ 138  Q
    ||||||||  ||||||||||| || |||| |||| ||||||||||||  ||||  ||||| | ||||||||||||  ||||||||| ||| |||          
T  9010501 aaataaagaccttgtgtgttagtaatttcgtgcaccaatagttagtggattttgatatagttggtattacctctagaattcagtatttgtaatatataat 9010402  T
Q  139 -atcgattatagtggaattcttttcaataactctacctgagaattagtcaacacattgttggataccacgttaa 211  Q
     ||||||||||||||||||||||||| |  |||| || | | ||||  || |||||||||||||||||| ||||    
T  9010401 aatcgattatagtggaattcttttcagtggctctgcccgtggattatgcagcacattgttggataccacattaa 9010328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 253
Target Start/End: Original strand, 32015318 - 32015401
Alignment:
Q  168 ctctacctgagaattagtcaacacattgttggataccacgttaattt-tatattatttttattctgtcttttactattattgtcatt 253  Q
    |||| |||| ||||||||||   ||||| ||||||||||||||| |  | | || |||||||||||||||||||||||||| |||||    
T  32015318 ctctgcctgtgaattagtca---cattgctggataccacgttaaatcatgtgttctttttattctgtcttttactattattatcatt 32015401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 65; Significance: 1e-28; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 11 - 195
Target Start/End: Original strand, 31141408 - 31141590
Alignment:
Q  11 agaatatgaaaaaatatgcaaagacttgaccatagaaataaaggtcttgtgtgttaatatttcttgcatcaatagttagtgagtttttctatagctagta 110  Q
    |||||| ||| ||||||||||||| ||  ||||| ||||||| |||||| |||||| |||||||| || ||||||| ||| |||||  |||||  | |||    
T  31141408 agaataggaagaaatatgcaaagatttagccatataaataaaagtcttgcgtgttagtatttcttacaccaatagtaagtaagtttg-ctataattggta 31141506  T
Q  111 ttacctctactattcagtatatgtgataatcgattatagtggaattcttttcaataactctacctgagaattagtcaacacattg 195  Q
    |||||||||||||||| ||| ||| ||||| |||||| |||||||||||||| || |||||| ||| | ||||||||||||||||    
T  31141507 ttacctctactattcaatatttgtaataattgattatggtggaattcttttc-atgactctatctgtggattagtcaacacattg 31141590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 19 - 163
Target Start/End: Original strand, 30046432 - 30046574
Alignment:
Q  19 aaaaaatatgcaaagacttgaccatagaaataaaggtcttgtgtgttaatatttcttgcatcaatagttagtgagtttttctatagctagtattacctct 118  Q
    |||||||||||||||||||||||||| ||||||| |  |||||||||| ||||||||| | |||||||||||  ||||| ||||||||||  ||||||||    
T  30046432 aaaaaatatgcaaagacttgaccatataaataaaagctttgtgtgttagtatttcttgta-caatagttagtcggttttgctatagctagcgttacctct 30046530  T
Q  119 actattcagtatatgtgataatcgattatagtggaattcttttca 163  Q
    |||||||| ||||||  || |||||||| | | ||||||||||||    
T  30046531 actattcaatatatgcaattatcgattaca-ttgaattcttttca 30046574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 41 - 124
Target Start/End: Original strand, 25889658 - 25889741
Alignment:
Q  41 catagaaataaaggtcttgtgtgttaatatttcttgcatcaatagttagtgagtttttctatagctagtattacctctactatt 124  Q
    |||| ||||||| ||||||| ||||| ||||||||||| |||||||||||| ||||| |||||||||| | |||||||| ||||    
T  25889658 catataaataaaagtcttgtatgttagtatttcttgcaccaatagttagtgggttttgctatagctagcagtacctctattatt 25889741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 13 - 123
Target Start/End: Complemental strand, 37133894 - 37133784
Alignment:
Q  13 aatatgaaaaaatatgcaaagacttgaccatagaaataaaggtcttgtgtgttaatatttcttgcatcaatagttagtgagtttttctatagctagtatt 112  Q
    ||||||||||||||| | |||| ||  || ||  |||||| ||||||||| ||| |||||||| |||||||||||||||| |||| ||||| ||| | ||    
T  37133894 aatatgaaaaaatatacgaagatttagccgtatgaataaaagtcttgtgtattagtatttcttacatcaatagttagtgaattttgctataactaatgtt 37133795  T
Q  113 acctctactat 123  Q
    | |||||||||    
T  37133794 aactctactat 37133784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 63; Significance: 2e-27; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 13 - 253
Target Start/End: Complemental strand, 16910219 - 16909979
Alignment:
Q  13 aatatgaaaaaatatgcaaagacttgaccatagaaataaaggtcttgtgtgttaatatttcttgcatcaatagttagtgagtttttctatagctagtatt 112  Q
    ||||||||  |||||||||||||||| |  || ||||||| || |||||||||| ||||| ||||  |||||||| ||| ||||| ||||||||||   |    
T  16910219 aatatgaaggaatatgcaaagacttggcattataaataaaagtattgtgtgttagtatttgttgcgccaatagtttgtgtgttttgctatagctag-cgt 16910121  T
Q  113 acctctactattcagtatatgtgataatcgattatagtggaattcttttcaataactctacctgagaattagtcaacacattgttggataccacgtt-aa 211  Q
    || | ||||||||||||| ||| || |||||||||||| |||||||||||| || |||||||   | | |||||| ||||||| ||||||||||||| ||    
T  16910120 acatttactattcagtatctgtaattatcgattatagt-gaattcttttcagtagctctacccatggaatagtcagcacattgctggataccacgttaaa 16910022  T
Q  212 ttttatattattttt-attctgtcttttactattattgtcatt 253  Q
    | || | |  ||||| ||| |||||||||||||||||||||||    
T  16910021 tcttgtgtcgtttttcattatgtcttttactattattgtcatt 16909979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 7 - 163
Target Start/End: Complemental strand, 11681587 - 11681427
Alignment:
Q  7 tcgaagaatatgaaaaaatatgcaaagacttgaccataga----aataaaggtcttgtgtgttaata-tttcttgcatcaatagttagtgagtttttcta 101  Q
    ||||| |||||||| ||||||||  |||||| |||||| |    |||||| || |||||||||| || ||||||||| |||||||||||| ||||| |||    
T  11681587 tcgaataatatgaagaaatatgcctagacttaaccatatatataaataaaagttttgtgtgttagtaatttcttgcaacaatagttagtg-gttttacta 11681489  T
Q  102 tagctagtattacctctactattcagtatatgtgataatcgattatagtggaattcttttca 163  Q
    ||||  ||||||||| ||||||||||||||||| || || ||||||||||||||| ||||||    
T  11681488 tagcaggtattacctatactattcagtatatgtaatcattgattatagtggaatttttttca 11681427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 13 - 126
Target Start/End: Complemental strand, 2921965 - 2921852
Alignment:
Q  13 aatatgaaaaaatatgcaaagacttgaccatagaaataaaggtcttgtgtgttaatatttcttgcatcaatagttagtgagtttttctatagctagtatt 112  Q
    |||||||| |||||||||| ||||||   ||| ||||||| ||||| ||||||| ||||||||||| |||||||||||| ||||| |||||||||| |||    
T  2921965 aatatgaagaaatatgcaatgacttggtaatataaataaaagtcttatgtgttagtatttcttgcaccaatagttagtgggttttgctatagctagcatt 2921866  T
Q  113 acctctactattca 126  Q
    || |||| ||||||    
T  2921865 acgtctaatattca 2921852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 22 - 126
Target Start/End: Complemental strand, 13556118 - 13556014
Alignment:
Q  22 aaatatgcaaagacttgaccatagaaataaaggtcttgtgtgttaatatttcttgcatcaatagttagtgagtttttctatagctagtattacctctact 121  Q
    |||||||||||| ||||  |||| ||||||| | ||||||||||| ||||||||||| ||||||||| || ||||| |||||||||| ||||| ||||||    
T  13556118 aaatatgcaaaggcttggtcatataaataaaagccttgtgtgttagtatttcttgcaccaatagttactgggttttgctatagctagcattacttctact 13556019  T
Q  122 attca 126  Q
    |||||    
T  13556018 attca 13556014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 15 - 125
Target Start/End: Original strand, 11677130 - 11677240
Alignment:
Q  15 tatgaaaaaatatgcaaagacttgaccatagaaataaaggtcttgtgtgttaatatttcttgcatcaatagttagtgagtttttctatagctagtattac 114  Q
    |||||| ||||||||||||  |||| |||| |||||||  |||||||||||| |||||||  || |||||||||| | ||||| |||||||||| |||||    
T  11677130 tatgaagaaatatgcaaaggattgatcatataaataaaactcttgtgtgttagtatttctaacaccaatagttagcgggttttcctatagctagcattac 11677229  T
Q  115 ctctactattc 125  Q
    |||||||||||    
T  11677230 ctctactattc 11677240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 13 - 126
Target Start/End: Complemental strand, 13558098 - 13557985
Alignment:
Q  13 aatatgaaaaaatatgcaaagacttgaccatagaaataaaggtcttgtgtgttaatatttcttgcatcaatagttagtgagtttttctatagctagtatt 112  Q
    |||||||| |||||||||||| ||||  |||| ||||||| |  |||||||||| |||||| |||| ||||||||||||  |||| |||| ||||| |||    
T  13558098 aatatgaagaaatatgcaaaggcttggtcatataaataaaagcattgtgtgttagtatttcatgcaccaatagttagtggattttgctattgctagcatt 13557999  T
Q  113 acctctactattca 126  Q
    || |||||||||||    
T  13557998 acttctactattca 13557985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 126
Target Start/End: Complemental strand, 2923282 - 2923168
Alignment:
Q  13 aatatgaaaaaatatgcaaa-gacttgaccatagaaataaaggtcttgtgtgttaatatttcttgcatcaatagttagtgagtttttctatagctagtat 111  Q
    |||||||| ||||||||||| | ||||  |||| ||||||| ||||||||||||| || ||||||||  ||||||||||| || ||  |||||||| |||    
T  2923282 aatatgaagaaatatgcaaaaggcttggtcatataaataaaagtcttgtgtgttagtacttcttgcactaatagttagtgggtcttgttatagctaatat 2923183  T
Q  112 tacctctactattca 126  Q
    ||| |||||||||||    
T  2923182 tacttctactattca 2923168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 41 - 103
Target Start/End: Complemental strand, 22880064 - 22880002
Alignment:
Q  41 catagaaataaaggtcttgtgtgttaatatttcttgcatcaatagttagtgagtttttctata 103  Q
    |||| |||||||||| |||||||||||||||||||||| ||||| |||||| ||||| |||||    
T  22880064 catataaataaaggttttgtgtgttaatatttcttgcaccaataattagtgggttttgctata 22880002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 253
Target Start/End: Original strand, 22258479 - 22258590
Alignment:
Q  143 attatagtggaattcttttcaataactctacctgagaattagtcaacacattgttggataccacg-ttaattttatattatttttattctgtcttttact 241  Q
    ||||||||||||||||||| | |  |||| |  | | |||||||||||||||| ||||||||||| ||||| || | |  |||| ||| |||||||||||    
T  22258479 attatagtggaattcttttaagtggctctgctcgtggattagtcaacacattgctggataccacgtttaatgttgtgtcgttttcattatgtcttttact 22258578  T
Q  242 attattgtcatt 253  Q
    ||||||||||||    
T  22258579 attattgtcatt 22258590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 13 - 126
Target Start/End: Original strand, 16403530 - 16403643
Alignment:
Q  13 aatatgaaaaaatatgcaaagacttgaccatagaaataaaggtcttgtgtgttaatatttcttgcatcaatagttagtgagtttttctatagct-agtat 111  Q
    |||||||| |||||||||| |||||   |||| ||||||| |||||||||||| |||||  ||||| ||||| ||||||  |||| |||||||| || ||    
T  16403530 aatatgaagaaatatgcaa-gacttagtcatataaataaaagtcttgtgtgtttatattatttgcaccaataattagtggattttgctatagctgagcat 16403628  T
Q  112 tacctctactattca 126  Q
    ||| |||||||||||    
T  16403629 tacttctactattca 16403643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 41 - 103
Target Start/End: Complemental strand, 22898179 - 22898117
Alignment:
Q  41 catagaaataaaggtcttgtgtgttaatatttcttgcatcaatagttagtgagtttttctata 103  Q
    |||| |||||||||| || ||||||||||||||||||| ||||| |||||| ||||| |||||    
T  22898179 catataaataaaggttttttgtgttaatatttcttgcaccaataattagtgggttttgctata 22898117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 13 - 126
Target Start/End: Complemental strand, 27340726 - 27340615
Alignment:
Q  13 aatatgaaaaaatatgcaaagacttgaccatagaaataaaggtcttgtgtgttaatatttcttgcatcaatagttagtgagtttttctatagctagtatt 112  Q
    |||||||| |||||||||||| ||||  |||| |||||||     ||||||||| ||| ||||| | |||||||||||| ||||| ||||| |||| |||    
T  27340726 aatatgaagaaatatgcaaaggcttggtcatataaataaaaac--tgtgtgttagtatatcttgtaccaatagttagtgggttttgctataactagcatt 27340629  T
Q  113 acctctactattca 126  Q
    || |||||||||||    
T  27340628 acttctactattca 27340615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 13 - 126
Target Start/End: Complemental strand, 27401466 - 27401355
Alignment:
Q  13 aatatgaaaaaatatgcaaagacttgaccatagaaataaaggtcttgtgtgttaatatttcttgcatcaatagttagtgagtttttctatagctagtatt 112  Q
    |||||||| |||||||||||| ||||  |||| |||||||     ||||||||| ||| ||||| | |||||||||||| ||||| ||||| |||| |||    
T  27401466 aatatgaagaaatatgcaaaggcttggtcatataaataaaaac--tgtgtgttagtatatcttgtaccaatagttagtgggttttgctataactagcatt 27401369  T
Q  113 acctctactattca 126  Q
    || |||||||||||    
T  27401368 acttctactattca 27401355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 100 - 163
Target Start/End: Complemental strand, 15921121 - 15921058
Alignment:
Q  100 tatagctagtattacctctactattcagtatatgtgataatcgattatagtggaattcttttca 163  Q
    |||||||  |||||||  ||||||||||||| ||| || ||||||| |||||||||||||||||    
T  15921121 tatagctgatattaccaatactattcagtatctgtaatcatcgattttagtggaattcttttca 15921058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 62; Significance: 7e-27; HSPs: 8)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 13 - 126
Target Start/End: Original strand, 22840975 - 22841088
Alignment:
Q  13 aatatgaaaaaatatgcaaagacttgaccatagaaataaaggtcttgtgtgttaatatttcttgcatcaatagttagtgagtttttctatagctagtatt 112  Q
    |||||||| |||||||||||| ||||  |||| ||||||| | ||||||||||| ||||||||||| |||||||||||| ||||| |||||||||| |||    
T  22840975 aatatgaagaaatatgcaaaggcttggtcataaaaataaaagccttgtgtgttagtatttcttgcaccaatagttagtgggttttactatagctagcatt 22841074  T
Q  113 acctctactattca 126  Q
    || |||||||||||    
T  22841075 acttctactattca 22841088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 15 - 106
Target Start/End: Original strand, 24272755 - 24272846
Alignment:
Q  15 tatgaaaaaatatgcaaagacttgaccatagaaataaaggtcttgtgtgttaatatttcttgcatcaatagttagtgagtttttctatagct 106  Q
    |||||| ||||||||||||||||||| ||| | ||||||| ||||||||||| ||||||||||| |||||||||||||||||| ||||||||    
T  24272755 tatgaagaaatatgcaaagacttgacaatatatataaaggccttgtgtgttagtatttcttgcaccaatagttagtgagttttactatagct 24272846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 13 - 126
Target Start/End: Complemental strand, 22827150 - 22827037
Alignment:
Q  13 aatatgaaaaaatatgcaaagacttgaccatagaaataaaggtcttgtgtgttaatatttcttgcatcaatagttagtgagtttttctatagctagtatt 112  Q
    |||||||| ||||||||||||  |||  |||| ||||||| | |||||||||| |||||||||||| |||||||||||| |||||  ||||||||| |||    
T  22827150 aatatgaagaaatatgcaaaggtttggtcatataaataaaagccttgtgtgttcatatttcttgcaccaatagttagtgggttttgttatagctagcatt 22827051  T
Q  113 acctctactattca 126  Q
    || |||||||||||    
T  22827050 acttctactattca 22827037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 11 - 130
Target Start/End: Original strand, 24284827 - 24284946
Alignment:
Q  11 agaatatgaaaaaatatgcaaagacttgaccatagaaataaaggtcttgtgtgttaatatttcttgcatcaatagttagtgagtttttctatagctagta 110  Q
    |||||||||| ||||||||||| | ||| | ||| |||||||||  |||||||||||||||||||||| ||||||| ||||  | || |||||||| |||    
T  24284827 agaatatgaacaaatatgcaaatatttggctatataaataaaggcattgtgtgttaatatttcttgcaccaatagtcagtggatgttactatagctggta 24284926  T
Q  111 ttacctctactattcagtat 130  Q
    ||| |||||||||| |||||    
T  24284927 ttagctctactatttagtat 24284946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 18 - 126
Target Start/End: Complemental strand, 22826750 - 22826642
Alignment:
Q  18 gaaaaaatatgcaaagacttgaccatagaaataaaggtcttgtgtgttaatatttcttgcatcaatagttagtgagtttttctatagctagtattacctc 117  Q
    |||||||| ||||||| ||||  |||| ||||||| | ||| ||||||| ||||||||||| ||||||||||||  |||| |||||||||| ||||| ||    
T  22826750 gaaaaaatctgcaaaggcttggtcatataaataaaagccttatgtgttagtatttcttgcaccaatagttagtggattttgctatagctagcattacttc 22826651  T
Q  118 tactattca 126  Q
    |||||||||    
T  22826650 tactattca 22826642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 55 - 134
Target Start/End: Complemental strand, 20261026 - 20260947
Alignment:
Q  55 tcttgtgtgttaatatttcttgcatcaatagttagtgagtttttctatagctagtattacctctactattcagtatatgt 134  Q
    |||||||| ||| |||||||||||||||||| || ||| |||| ||||| ||||  ||||||||||||||||||||||||    
T  20261026 tcttgtgtattagtatttcttgcatcaatagctaatgaattttgctataactagcgttacctctactattcagtatatgt 20260947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 143 - 253
Target Start/End: Original strand, 12466089 - 12466200
Alignment:
Q  143 attatagtggaattcttttcaataactctacctgagaattagtcaacacattgttggataccacg-ttaattttatattatttttattctgtcttttact 241  Q
    |||||||||||||||||||||||  |||| || | |||||||||| ||||||| ||||||||||| ||||| || |    |||| ||| |||||||||||    
T  12466089 attatagtggaattcttttcaatggctctgcccgtgaattagtcagcacattgatggataccacgtttaatcttgtgccgttttcattatgtcttttact 12466188  T
Q  242 attattgtcatt 253  Q
    ||||| ||||||    
T  12466189 attatagtcatt 12466200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 46 - 126
Target Start/End: Original strand, 12458584 - 12458664
Alignment:
Q  46 aaataaaggtcttgtgtgttaatatttcttgcatcaatagttagtgagtttttctatagctagtattacctctactattca 126  Q
    ||||||||  ||||||||||| ||||||||| | |||||||||||  | ||| ||| |||| |||||||||||||||||||    
T  12458584 aaataaagaccttgtgtgttagtatttcttgtaccaatagttagtaggatttgctagagctggtattacctctactattca 12458664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 57; Significance: 7e-24; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 13 - 137
Target Start/End: Original strand, 19670676 - 19670800
Alignment:
Q  13 aatatgaaaaaatatgcaaagacttgaccatagaaataaaggtcttgtgtgttaatatttcttgcatcaatagttagtgagtttttctatagctagtatt 112  Q
    |||||||| |||||||||||| |||   |||| ||||||| | ||||||||||| |||| |||| | |||||||||||| ||||| ||||||||||  ||    
T  19670676 aatatgaagaaatatgcaaaggcttagtcatataaataaaagccttgtgtgttagtattacttgtaccaatagttagtgggttttgctatagctagcgtt 19670775  T
Q  113 acctctactattcagtatatgtgat 137  Q
    ||||||||||||||||||| |||||    
T  19670776 acctctactattcagtatacgtgat 19670800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 11 - 113
Target Start/End: Original strand, 26896584 - 26896686
Alignment:
Q  11 agaatatgaaaaaatatgcaaagacttgaccatagaaataaaggtcttgtgtgttaatatttcttgcatcaatagttagtgagtttttctatagctagta 110  Q
    |||||| ||| ||||||||||||||||| ||||| ||||||||   |||||||||| |||||||||||| |||||||| || ||||| ||||||||||||    
T  26896584 agaataggaagaaatatgcaaagacttggccatataaataaagacattgtgtgttagtatttcttgcattaatagttaatgtgttttgctatagctagta 26896683  T
Q  111 tta 113  Q
    |||    
T  26896684 tta 26896686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 13 - 123
Target Start/End: Complemental strand, 32795653 - 32795543
Alignment:
Q  13 aatatgaaaaaatatgcaaagacttgaccatagaaataaaggtcttgtgtgttaatatttcttgcatcaatagttagtgagtttttctatagctagtatt 112  Q
    |||||||| ||||||||||||||||   ||||  |||||| |||||| |||| | |||| |||| | |||||||||||| ||||| ||||| |||   ||    
T  32795653 aatatgaagaaatatgcaaagacttagtcatattaataaaagtcttgcgtgtcagtattacttgtaccaatagttagtgggttttgctataactaacgtt 32795554  T
Q  113 acctctactat 123  Q
    |||||||||||    
T  32795553 acctctactat 32795543  T

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Target: chr2 (Bit Score: 54; Significance: 4e-22; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 22 - 163
Target Start/End: Original strand, 25550094 - 25550234
Alignment:
Q  22 aaatatgcaaagacttgaccatagaaataaaggtcttgtgtgttaatatttcttgcatcaatagttagtgagtttttctatagctagtattacctctact 121  Q
    ||||||| ||||| ||| ||||| ||||||| ||||||||||| | ||||||||| |  |||||||||||  |||| |||||||| |  |||||| ||||    
T  25550094 aaatatgtaaagatttggccatataaataaaagtcttgtgtgt-agtatttcttggactaatagttagtggattttcctatagctggagttacctttact 25550192  T
Q  122 attcagtatatgtgataatcgattatagtggaattcttttca 163  Q
    ||||||||| ||| || |||||||||||| ||||||||||||    
T  25550193 attcagtatctgtaattatcgattatagtagaattcttttca 25550234  T

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Target: chr2; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 130
Target Start/End: Complemental strand, 8761296 - 8761178
Alignment:
Q  13 aatatgaaaaaatatgcaaagactt-gaccatagaaataaaggtcttgtgtgttaatatttcttgcatcaatagttagtgagtttttctatagctagtat 111  Q
    |||||||| ||||||||||| |||| |  |||| ||||||| ||||||||||||| ||||||||||| |||| |||||||  ||||  ||||||||| ||    
T  8761296 aatatgaagaaatatgcaaatactttggtcatataaataaaagtcttgtgtgttagtatttcttgcaccaattgttagtggattttgttatagctagcat 8761197  T
Q  112 tacctctactattcagtat 130  Q
    || ||||||||||||||||    
T  8761196 tatctctactattcagtat 8761178  T

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Target: chr2; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 90
Target Start/End: Original strand, 10128505 - 10128584
Alignment:
Q  11 agaatatgaaaaaatatgcaaagacttgaccatagaaataaaggtcttgtgtgttaatatttcttgcatcaatagttagt 90  Q
    |||||||||| ||||||| |||||||||  |||| ||||||| ||||||||||||| ||||||||||| |||||||||||    
T  10128505 agaatatgaagaaatatggaaagacttggtcatataaataaaagtcttgtgtgttagtatttcttgcaccaatagttagt 10128584  T

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Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 97
Target Start/End: Complemental strand, 37965604 - 37965519
Alignment:
Q  13 aatatgaaaaaatatgcaaagacttgaccatagaaataaaggtctt-gtgtgttaatatttcttgcatcaatagttagtgagtttt 97  Q
    |||||||| |||||||||||||||||   ||| ||||||| ||||| |||||||| ||||||||||| ||||||||| || |||||    
T  37965604 aatatgaagaaatatgcaaagacttggatatataaataaaagtctttgtgtgttagtatttcttgcaccaatagttaatgggtttt 37965519  T

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Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 111 - 211
Target Start/End: Complemental strand, 37965304 - 37965205
Alignment:
Q  111 ttacctctactattcagtatatgtgataatcgattatagtggaattcttttcaataactctacctgagaattagtcaacacattgttggataccacgtta 210  Q
    |||||||||||||||||||| ||| || |||||||||||| |||||||||| | | ||||| ||   | |||||||| |  |||||||||||||||||||    
T  37965304 ttacctctactattcagtatctgtaattatcgattatagt-gaattctttttagtgactctgcccatggattagtcaccttattgttggataccacgtta 37965206  T

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Target: chr8 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 46 - 126
Target Start/End: Original strand, 42001907 - 42001987
Alignment:
Q  46 aaataaaggtcttgtgtgttaatatttcttgcatcaatagttagtgagtttttctatagctagtattacctctactattca 126  Q
    ||||||| ||||||||||||| || | |||||| |||||||||||  ||||| |||||| ||| ||||| |||||||||||    
T  42001907 aaataaaagtcttgtgtgttagtaatacttgcaccaatagttagtaggttttgctataggtagcattacttctactattca 42001987  T

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Target: chr8; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 13 - 90
Target Start/End: Original strand, 33897216 - 33897293
Alignment:
Q  13 aatatgaaaaaatatgcaaagacttgaccatagaaataaaggtcttgtgtgttaatatttcttgcatcaatagttagt 90  Q
    |||| ||| ||||||| ||||| ||||| ||| ||||||| ||||||||||||| ||||| || || ||||| |||||    
T  33897216 aataggaagaaatatgtaaagatttgacaatataaataaaagtcttgtgtgttagtattttttacaccaataattagt 33897293  T

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Target: scaffold0065 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 130
Target Start/End: Original strand, 34766 - 34816
Alignment:
Q  80 caatagttagtgagtttttctatagctagtattacctctactattcagtat 130  Q
    |||||||||||| ||||| ||||||||| |||||| ||||||||| |||||    
T  34766 caatagttagtgggttttgctatagctaatattacttctactatttagtat 34816  T

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Target: scaffold0007 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 15 - 88
Target Start/End: Complemental strand, 260286 - 260213
Alignment:
Q  15 tatgaaaaaatatgcaaagacttgaccatagaaataaaggtcttgtgtgttaatatttcttgcatcaatagtta 88  Q
    |||||| ||||||||||||||||   || | |||||||   ||||||||||| ||||||||||| |||||||||    
T  260286 tatgaagaaatatgcaaagacttagtcaaataaataaaatccttgtgtgttagtatttcttgcaccaatagtta 260213  T

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