View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3429_low_2 (Length: 425)
Name: NF3429_low_2
Description: NF3429
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3429_low_2 |
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Alignment Details
Target: chr7 (Bit Score: 318; Significance: 1e-179; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 318; E-Value: 1e-179
Query Start/End: Original strand, 1 - 406
Target Start/End: Complemental strand, 1716525 - 1716116
Alignment:
| Q |
1 |
actattattgccattattctcgcatccaattataacataatctaacaattcattaactacgtgtgtgagctgtgttaccattgaannnnnnnngtataca |
100 |
Q |
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|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| |
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| T |
1716525 |
actattattgtcattattctcgcatccaattataacataatctaacaattcattaactacgtgtgtgagctgtgttaccattgaattttttttgtgtaca |
1716426 |
T |
|
| Q |
101 |
aattgatattcaaataagatttctgattatatt-aattgcagttttcttttctacggttnnnnnnng-gggggagaaatgtttcatttcaatgcaactat |
198 |
Q |
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||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
1716425 |
aattgatattcaaataagatttctgattatatttaattgcagttttcttttctacggttaaaaaaaaagggggagaaatgtttcatttcaatgcaactat |
1716326 |
T |
|
| Q |
199 |
acaaagtctaactctcacactcttttatacctccattgttgtgttta--caagaacaatatataaatggattaattattgagctactattggacccacac |
296 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| |||||||||||||||||||||||||||||| |
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| T |
1716325 |
acaaagtctaactctcacactcttttatacctccattgttgtgattatacaagaacaatatataaatggcttaattattgagctactattggacccacac |
1716226 |
T |
|
| Q |
297 |
aacaacctttacattgacaagtgggtgattattagcagcatgtgtttaatcatgctcaaagtgtcgacaaacaacttgtgatgatgaagcatccactcat |
396 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1716225 |
aacaacctttacattgacaagtgggtgattattagcagcatgtgtttaatcatgctcaaagtgtcgacaaacaacttgtgatgatgaagcatccactcat |
1716126 |
T |
|
| Q |
397 |
aagtcatgac |
406 |
Q |
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|||||||||| |
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| T |
1716125 |
aagtcatgac |
1716116 |
T |
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