View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3430_low_28 (Length: 236)
Name: NF3430_low_28
Description: NF3430
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3430_low_28 |
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Alignment Details
Target: chr8 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 40590302 - 40590082
Alignment:
| Q |
1 |
atggttttaggtcaagactcgtaaataggtcaatatggaatatacttagtaggtttcctctctaaaccaccaaatagcagtccactcctcatatagtttt |
100 |
Q |
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| T |
40590302 |
atggttttaggtcaagactcgtaaataggtcaacatggaatatacttagtcggtttcctctctaaaccaccaaatagcactccactcctcatatagtttt |
40590203 |
T |
|
| Q |
101 |
caaaatgaattaatttattaactcaactcacctcaagggaatgacaattagaccatattcatttgcaaattaaattacctacaccaagtaggctcaaaac |
200 |
Q |
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| T |
40590202 |
caaaatgaattaatttattaactcaactcacctcaagggaatgacaattagaccatattcatttgcaaattaaattacctacaccaagtaggctcaaaac |
40590103 |
T |
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| Q |
201 |
ctgcattatgagtatgattat |
221 |
Q |
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||||||||||||||||||||| |
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| T |
40590102 |
ctgcattatgagtatgattat |
40590082 |
T |
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