View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3431_high_5 (Length: 514)

Name: NF3431_high_5
Description: NF3431
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3431_high_5
NF3431_high_5
[»] chr1 (53 HSPs)
chr1 (1-479)||(38539127-38539612)
chr1 (1-479)||(38561345-38561830)
chr1 (1-298)||(38522174-38522471)
chr1 (343-461)||(35438773-35438892)
chr1 (343-478)||(9516622-9516758)
chr1 (342-456)||(51920431-51920546)
chr1 (336-474)||(38812785-38812924)
chr1 (343-456)||(13241820-13241934)
chr1 (338-427)||(313842-313931)
chr1 (340-385)||(1502718-1502763)
chr1 (340-385)||(23576412-23576457)
chr1 (340-389)||(30172010-30172059)
chr1 (340-389)||(30187551-30187600)
chr1 (339-427)||(6569982-6570070)
chr1 (338-385)||(34802102-34802149)
chr1 (340-387)||(44918157-44918204)
chr1 (335-385)||(35512860-35512910)
chr1 (330-479)||(39150315-39150464)
chr1 (343-440)||(43909273-43909368)
chr1 (340-385)||(6180321-6180366)
chr1 (339-387)||(6754604-6754652)
chr1 (342-382)||(23591836-23591876)
chr1 (330-385)||(3168056-3168111)
chr1 (340-387)||(6307635-6307682)
chr1 (342-385)||(16966500-16966543)
chr1 (343-385)||(5875216-5875258)
chr1 (340-378)||(25465300-25465338)
chr1 (341-427)||(30288863-30288949)
chr1 (339-385)||(30362992-30363038)
chr1 (339-385)||(36490914-36490960)
chr1 (343-381)||(41676561-41676599)
chr1 (328-385)||(1366182-1366239)
chr1 (342-443)||(29635748-29635849)
chr1 (340-385)||(39310784-39310829)
chr1 (340-385)||(51382449-51382494)
chr1 (342-479)||(2222236-2222372)
chr1 (340-432)||(4249294-4249386)
chr1 (340-432)||(4249618-4249710)
chr1 (340-432)||(4249942-4250034)
chr1 (341-385)||(13322011-13322055)
chr1 (340-479)||(17919494-17919633)
chr1 (340-427)||(3096302-3096389)
chr1 (342-441)||(3121836-3121933)
chr1 (340-387)||(41624962-41625009)
chr1 (342-443)||(7519996-7520098)
chr1 (341-427)||(10896446-10896532)
chr1 (342-443)||(5057079-5057180)
chr1 (341-378)||(5879102-5879139)
chr1 (340-385)||(22167470-22167515)
chr1 (337-385)||(3611886-3611934)
chr1 (343-427)||(9661989-9662073)
chr1 (329-385)||(25532344-25532400)
chr1 (403-443)||(33048173-33048213)
[»] chr7 (44 HSPs)
chr7 (340-479)||(32117855-32117994)
chr7 (343-461)||(7899487-7899606)
chr7 (334-427)||(3561870-3561963)
chr7 (341-443)||(8420832-8420934)
chr7 (337-385)||(33072116-33072164)
chr7 (337-427)||(39757105-39757195)
chr7 (328-479)||(9332002-9332153)
chr7 (338-385)||(33343123-33343170)
chr7 (338-385)||(34270396-34270443)
chr7 (338-444)||(23982751-23982857)
chr7 (341-427)||(36548459-36548545)
chr7 (340-385)||(46290145-46290190)
chr7 (343-461)||(2276733-2276853)
chr7 (339-387)||(47457458-47457506)
chr7 (338-385)||(820537-820584)
chr7 (342-385)||(29692540-29692583)
chr7 (341-443)||(22041725-22041827)
chr7 (343-385)||(26050462-26050504)
chr7 (343-385)||(26059821-26059863)
chr7 (340-385)||(4969908-4969953)
chr7 (334-427)||(5909274-5909367)
chr7 (342-387)||(22334021-22334066)
chr7 (340-387)||(7040250-7040297)
chr7 (340-387)||(7170135-7170182)
chr7 (340-387)||(19889473-19889520)
chr7 (340-427)||(24462953-24463040)
chr7 (342-385)||(25709399-25709442)
chr7 (344-387)||(41331458-41331501)
chr7 (337-427)||(5833448-5833538)
chr7 (358-427)||(12624730-12624798)
chr7 (344-385)||(18102232-18102273)
chr7 (341-385)||(8091311-8091355)
chr7 (337-385)||(36032538-36032586)
chr7 (342-385)||(8595032-8595075)
chr7 (342-385)||(29398134-29398177)
chr7 (341-384)||(44807035-44807078)
chr7 (342-385)||(45501594-45501637)
chr7 (337-427)||(384426-384515)
chr7 (343-385)||(44473513-44473555)
chr7 (344-433)||(8170608-8170697)
chr7 (340-385)||(12085929-12085974)
chr7 (377-461)||(19868172-19868257)
chr7 (342-387)||(24250631-24250676)
chr7 (344-385)||(26037228-26037269)
[»] chr5 (31 HSPs)
chr5 (335-479)||(13515919-13516063)
chr5 (342-456)||(32019984-32020099)
chr5 (337-387)||(2795656-2795706)
chr5 (340-385)||(30839916-30839961)
chr5 (340-385)||(36597714-36597759)
chr5 (340-427)||(4047505-4047592)
chr5 (342-385)||(31365950-31365993)
chr5 (344-427)||(31567493-31567576)
chr5 (337-427)||(14466489-14466579)
chr5 (340-385)||(3398355-3398400)
chr5 (340-385)||(6863691-6863736)
chr5 (342-427)||(23995416-23995501)
chr5 (343-427)||(34578104-34578188)
chr5 (340-387)||(8103578-8103625)
chr5 (340-387)||(11636864-11636911)
chr5 (342-375)||(15240950-15240983)
chr5 (342-375)||(19743247-19743280)
chr5 (344-385)||(30893764-30893805)
chr5 (343-387)||(41350335-41350379)
chr5 (342-385)||(12641993-12642036)
chr5 (342-385)||(35469689-35469732)
chr5 (340-370)||(7401495-7401525)
chr5 (341-474)||(18841704-18841838)
chr5 (341-379)||(29766308-29766346)
chr5 (335-376)||(31705073-31705114)
chr5 (342-478)||(40166323-40166459)
chr5 (335-387)||(11376093-11376145)
chr5 (343-387)||(16174623-16174667)
chr5 (407-454)||(18150479-18150527)
chr5 (338-378)||(29855893-29855933)
chr5 (345-385)||(40513086-40513126)
[»] chr4 (54 HSPs)
chr4 (341-479)||(27756602-27756740)
chr4 (340-449)||(9326863-9326974)
chr4 (340-449)||(9373585-9373696)
chr4 (340-449)||(9381897-9382008)
chr4 (342-457)||(1378080-1378195)
chr4 (343-427)||(23553663-23553747)
chr4 (343-427)||(49250336-49250420)
chr4 (337-427)||(16667379-16667469)
chr4 (337-387)||(35999942-35999992)
chr4 (334-470)||(2096920-2097057)
chr4 (340-389)||(27362522-27362571)
chr4 (340-389)||(54495635-54495684)
chr4 (337-389)||(47326887-47326939)
chr4 (337-389)||(47341683-47341735)
chr4 (343-461)||(51070399-51070516)
chr4 (340-427)||(7349781-7349868)
chr4 (338-385)||(9759138-9759185)
chr4 (330-385)||(18882255-18882310)
chr4 (340-474)||(19468239-19468374)
chr4 (340-387)||(23051380-23051427)
chr4 (342-449)||(53961393-53961500)
chr4 (340-389)||(8736809-8736858)
chr4 (338-474)||(19450896-19451033)
chr4 (340-385)||(39876965-39877010)
chr4 (340-385)||(40049693-40049738)
chr4 (340-385)||(50352437-50352482)
chr4 (337-382)||(51691479-51691524)
chr4 (337-385)||(17409959-17410007)
chr4 (341-385)||(29190815-29190859)
chr4 (344-384)||(42479894-42479934)
chr4 (329-385)||(49228789-49228845)
chr4 (340-474)||(27019305-27019440)
chr4 (337-383)||(4779431-4779477)
chr4 (340-385)||(3085805-3085850)
chr4 (338-427)||(4329687-4329776)
chr4 (338-474)||(33632199-33632335)
chr4 (336-385)||(34941413-34941462)
chr4 (342-427)||(36971367-36971452)
chr4 (334-427)||(41415549-41415642)
chr4 (340-385)||(44916641-44916686)
chr4 (345-385)||(24684972-24685012)
chr4 (343-378)||(9971661-9971696)
chr4 (342-385)||(23545611-23545654)
chr4 (342-385)||(40682567-40682609)
chr4 (339-378)||(49181214-49181253)
chr4 (341-387)||(25843427-25843473)
chr4 (343-385)||(52391433-52391475)
chr4 (341-378)||(13214415-13214452)
chr4 (340-385)||(23438290-23438335)
chr4 (340-385)||(53376406-53376451)
chr4 (343-427)||(41887570-41887654)
chr4 (336-376)||(41887712-41887752)
chr4 (337-385)||(46803934-46803982)
chr4 (343-387)||(48910803-48910847)
[»] chr6 (32 HSPs)
chr6 (343-479)||(31790917-31791053)
chr6 (338-387)||(3853076-3853125)
chr6 (338-385)||(14228122-14228169)
chr6 (336-387)||(17596474-17596525)
chr6 (340-385)||(17552585-17552630)
chr6 (340-385)||(28943767-28943812)
chr6 (338-427)||(31503835-31503924)
chr6 (337-385)||(34692489-34692537)
chr6 (342-389)||(10887160-10887207)
chr6 (335-385)||(2830674-2830724)
chr6 (338-388)||(18332684-18332734)
chr6 (338-387)||(31169759-31169808)
chr6 (340-479)||(12454106-12454245)
chr6 (341-385)||(29863301-29863345)
chr6 (335-387)||(31568242-31568294)
chr6 (340-383)||(8467790-8467833)
chr6 (373-440)||(16540684-16540751)
chr6 (343-389)||(6016987-6017033)
chr6 (341-387)||(32614943-32614989)
chr6 (340-385)||(13391810-13391855)
chr6 (340-385)||(33017859-33017904)
chr6 (346-385)||(20979107-20979146)
chr6 (342-377)||(24979149-24979184)
chr6 (342-385)||(27819627-27819670)
chr6 (341-376)||(28470001-28470036)
chr6 (338-385)||(31069578-31069625)
chr6 (340-385)||(3261213-3261258)
chr6 (343-432)||(16540809-16540898)
chr6 (342-379)||(22284748-22284785)
chr6 (341-385)||(29065424-29065468)
chr6 (341-385)||(29120277-29120321)
chr6 (342-378)||(30591163-30591199)
[»] chr2 (40 HSPs)
chr2 (340-479)||(36731220-36731360)
chr2 (340-462)||(9450314-9450437)
chr2 (334-427)||(16126551-16126644)
chr2 (342-473)||(20566017-20566149)
chr2 (336-443)||(15231908-15232015)
chr2 (340-443)||(24729575-24729678)
chr2 (340-385)||(38248418-38248463)
chr2 (334-385)||(5583550-5583601)
chr2 (344-479)||(14377465-14377600)
chr2 (344-427)||(36909419-36909502)
chr2 (340-386)||(6109523-6109569)
chr2 (340-382)||(29157827-29157869)
chr2 (340-385)||(7757784-7757829)
chr2 (340-385)||(8065258-8065303)
chr2 (335-479)||(12016707-12016851)
chr2 (334-427)||(12919342-12919435)
chr2 (344-427)||(2060044-2060127)
chr2 (344-387)||(19228558-19228601)
chr2 (344-427)||(26003348-26003431)
chr2 (340-387)||(27665042-27665089)
chr2 (340-443)||(35729194-35729297)
chr2 (337-383)||(5853458-5853504)
chr2 (339-385)||(9747452-9747498)
chr2 (331-385)||(16123413-16123467)
chr2 (337-383)||(16493527-16493573)
chr2 (343-385)||(34213950-34213992)
chr2 (340-378)||(43388479-43388517)
chr2 (337-474)||(43806405-43806543)
chr2 (340-385)||(4576324-4576369)
chr2 (340-385)||(17265539-17265584)
chr2 (343-427)||(8770887-8770971)
chr2 (342-378)||(11660894-11660930)
chr2 (344-479)||(15411624-15411760)
chr2 (340-387)||(4821409-4821456)
chr2 (337-383)||(22704674-22704720)
chr2 (343-427)||(3951343-3951427)
chr2 (343-427)||(8847880-8847964)
chr2 (340-384)||(29142210-29142254)
chr2 (340-384)||(34817881-34817925)
chr2 (342-378)||(45062340-45062376)
[»] chr8 (54 HSPs)
chr8 (340-478)||(29642644-29642783)
chr8 (344-462)||(20514690-20514809)
chr8 (340-479)||(12132023-12132163)
chr8 (340-479)||(14816124-14816263)
chr8 (340-479)||(14829477-14829616)
chr8 (337-385)||(2161522-2161570)
chr8 (344-444)||(7489678-7489778)
chr8 (340-387)||(26682201-26682248)
chr8 (339-385)||(5573421-5573467)
chr8 (340-385)||(3306053-3306098)
chr8 (340-385)||(6818152-6818197)
chr8 (340-385)||(8284566-8284611)
chr8 (340-427)||(10129196-10129283)
chr8 (337-387)||(39024852-39024902)
chr8 (341-427)||(39701802-39701888)
chr8 (344-456)||(7393247-7393359)
chr8 (340-385)||(18567414-18567459)
chr8 (340-385)||(26363988-26364033)
chr8 (340-385)||(27874679-27874724)
chr8 (340-385)||(28014856-28014901)
chr8 (343-387)||(4080395-4080439)
chr8 (343-387)||(4084544-4084588)
chr8 (343-387)||(4102851-4102895)
chr8 (338-378)||(12958642-12958682)
chr8 (343-479)||(13327942-13328078)
chr8 (338-382)||(15198896-15198940)
chr8 (340-387)||(1203734-1203781)
chr8 (340-427)||(7140457-7140544)
chr8 (340-387)||(9801801-9801848)
chr8 (342-385)||(13496709-13496752)
chr8 (342-385)||(22838360-22838403)
chr8 (342-385)||(38212944-38212987)
chr8 (337-383)||(40225982-40226028)
chr8 (340-385)||(14961661-14961706)
chr8 (340-385)||(26834696-26834741)
chr8 (340-385)||(31812248-31812293)
chr8 (343-427)||(42195-42279)
chr8 (341-385)||(12189587-12189631)
chr8 (341-385)||(12434015-12434059)
chr8 (340-444)||(35678273-35678376)
chr8 (335-427)||(42781567-42781659)
chr8 (334-378)||(43717544-43717588)
chr8 (344-387)||(44091451-44091494)
chr8 (334-376)||(10543772-10543814)
chr8 (337-379)||(11946915-11946957)
chr8 (343-385)||(28866932-28866974)
chr8 (349-474)||(36967077-36967203)
chr8 (329-385)||(297230-297291)
chr8 (340-385)||(9580107-9580152)
chr8 (337-387)||(34405057-34405111)
chr8 (340-385)||(38843839-38843884)
chr8 (340-385)||(45006104-45006149)
chr8 (344-385)||(45518087-45518128)
chr8 (344-455)||(38047940-38048051)
[»] scaffold0727 (1 HSPs)
scaffold0727 (343-427)||(5784-5868)
[»] chr3 (43 HSPs)
chr3 (343-474)||(23638050-23638182)
chr3 (340-385)||(2571403-2571448)
chr3 (340-385)||(10307901-10307946)
chr3 (340-389)||(23523077-23523126)
chr3 (340-389)||(38389578-38389627)
chr3 (339-427)||(3863422-3863510)
chr3 (340-427)||(16875023-16875110)
chr3 (336-387)||(29686453-29686504)
chr3 (343-432)||(37332201-37332290)
chr3 (341-438)||(49396462-49396559)
chr3 (340-385)||(50204538-50204583)
chr3 (338-385)||(8165781-8165828)
chr3 (340-387)||(11611109-11611156)
chr3 (343-443)||(35095029-35095131)
chr3 (342-385)||(40930186-40930229)
chr3 (343-378)||(46845144-46845179)
chr3 (337-383)||(33474468-33474514)
chr3 (338-424)||(40497143-40497229)
chr3 (340-378)||(51618189-51618227)
chr3 (343-385)||(54527707-54527749)
chr3 (340-385)||(12515472-12515517)
chr3 (342-387)||(20938190-20938235)
chr3 (340-385)||(40330293-40330338)
chr3 (342-387)||(46492343-46492388)
chr3 (343-411)||(27549653-27549721)
chr3 (341-389)||(36426408-36426456)
chr3 (337-372)||(38757852-38757887)
chr3 (340-427)||(45983599-45983686)
chr3 (343-456)||(7940855-7940969)
chr3 (329-443)||(15004406-15004520)
chr3 (340-378)||(25633140-25633178)
chr3 (339-385)||(32553501-32553547)
chr3 (343-385)||(42180187-42180229)
chr3 (346-387)||(11611047-11611088)
chr3 (342-387)||(13495427-13495472)
chr3 (343-384)||(31318777-31318818)
chr3 (342-462)||(35414809-35414930)
chr3 (340-385)||(51401575-51401620)
chr3 (343-376)||(51567821-51567854)
chr3 (341-385)||(2566617-2566661)
chr3 (345-385)||(23803049-23803089)
chr3 (378-426)||(28992809-28992857)
chr3 (343-387)||(41151766-41151810)
[»] scaffold0136 (1 HSPs)
scaffold0136 (344-434)||(1445-1535)
[»] scaffold0061 (1 HSPs)
scaffold0061 (338-387)||(52775-52824)
[»] scaffold0018 (1 HSPs)
scaffold0018 (334-387)||(182175-182228)
[»] scaffold0017 (1 HSPs)
scaffold0017 (338-387)||(145810-145859)
[»] scaffold0149 (1 HSPs)
scaffold0149 (343-462)||(22521-22641)
[»] scaffold0111 (2 HSPs)
scaffold0111 (340-388)||(37112-37160)
scaffold0111 (342-385)||(41117-41160)
[»] scaffold0011 (1 HSPs)
scaffold0011 (341-385)||(13220-13264)
[»] scaffold0073 (1 HSPs)
scaffold0073 (340-387)||(16533-16580)
[»] scaffold0229 (1 HSPs)
scaffold0229 (328-385)||(24513-24570)
[»] scaffold0009 (1 HSPs)
scaffold0009 (343-432)||(191316-191404)
[»] scaffold0155 (1 HSPs)
scaffold0155 (339-387)||(3410-3458)
[»] scaffold0618 (1 HSPs)
scaffold0618 (344-387)||(8416-8459)
[»] scaffold0128 (1 HSPs)
scaffold0128 (341-385)||(44293-44337)
[»] scaffold0036 (1 HSPs)
scaffold0036 (342-378)||(94018-94054)


Alignment Details
Target: chr1 (Bit Score: 391; Significance: 0; HSPs: 53)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 391; E-Value: 0
Query Start/End: Original strand, 1 - 479
Target Start/End: Complemental strand, 38539612 - 38539127
Alignment:
Q  1 ttgcacgtgcaataatcaaaagtccaaagattttgttacttgatgaggcaacaagtgcattagatgcagaatcagagagagttgttcaagatgcattaga 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38539612 ttgcacgtgcaataatcaaaagtccaaagattttgttacttgatgaggcaacaagtgcattagatgcagaatcagagagagttgttcaagatgcattaga 38539513  T
Q  101 taaagtaatggtaaataggaccactgtggttgtggcacatcgtttatctacagttaaaaatgcagatgttattgctgttgtcaagaatggagttatagtt 200  Q
     ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38539512 caaagtgatggtaaataggaccactgtggttgtggcacatcgtttatctacagttaaaaatgcagatgttattgctgttgtcaagaatggagttatagtt 38539413  T
Q  201 gaaaaaggaagacatgaaatacttattaatgttaaagatggattttatgcttccttagtccaacttcatactagtgctaaaacagtataggcttttacca 300  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38539412 gaaaaaggaagacatgaaacacttattaatgtttaagatggattttatgcttccttagtccaacttcatactagtgctaaaacagtataggcttttacca 38539313  T
Q  301 ctttgcagtaatcccataattcttcctcatttcttttatgggtttttctatcatgtgc----------aaatttgtacatgttaagaaatttaaagtggc 390  Q
    ||||| ||||||||||| |||||||||| |||||||||| |||||||||||||| |||          ||||||| ||||||||||||||||||||||||    
T  38539312 ctttgtagtaatcccat-attcttcctcttttcttttataggtttttctatcatttgcaaatttgcgtaaatttgcacatgttaagaaatttaaagtggc 38539214  T
Q  391 aagtttatcttaaaatttgtatattctatattaaatagataacattttaataataattggtgttttccaatacaaagttgctacattta 479  Q
    ||||||||||||||||||||||||||||||  ||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  38539213 aagtttatcttaaaatttgtatattctata--aaatagataactttttaataataattggtgttttccaatgcaaagttgctacattta 38539127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 391; E-Value: 0
Query Start/End: Original strand, 1 - 479
Target Start/End: Complemental strand, 38561830 - 38561345
Alignment:
Q  1 ttgcacgtgcaataatcaaaagtccaaagattttgttacttgatgaggcaacaagtgcattagatgcagaatcagagagagttgttcaagatgcattaga 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38561830 ttgcacgtgcaataatcaaaagtccaaagattttgttacttgatgaggcaacaagtgcattagatgcagaatcagagagagttgttcaagatgcattaga 38561731  T
Q  101 taaagtaatggtaaataggaccactgtggttgtggcacatcgtttatctacagttaaaaatgcagatgttattgctgttgtcaagaatggagttatagtt 200  Q
     ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38561730 caaagtgatggtaaataggaccactgtggttgtggcacatcgtttatctacagttaaaaatgcagatgttattgctgttgtcaagaatggagttatagtt 38561631  T
Q  201 gaaaaaggaagacatgaaatacttattaatgttaaagatggattttatgcttccttagtccaacttcatactagtgctaaaacagtataggcttttacca 300  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38561630 gaaaaaggaagacatgaaacacttattaatgtttaagatggattttatgcttccttagtccaacttcatactagtgctaaaacagtataggcttttacca 38561531  T
Q  301 ctttgcagtaatcccataattcttcctcatttcttttatgggtttttctatcatgtgc----------aaatttgtacatgttaagaaatttaaagtggc 390  Q
    ||||| ||||||||||| |||||||||| |||||||||| |||||||||||||| |||          ||||||| ||||||||||||||||||||||||    
T  38561530 ctttgtagtaatcccat-attcttcctcttttcttttataggtttttctatcatttgcaaatttgcgtaaatttgcacatgttaagaaatttaaagtggc 38561432  T
Q  391 aagtttatcttaaaatttgtatattctatattaaatagataacattttaataataattggtgttttccaatacaaagttgctacattta 479  Q
    ||||||||||||||||||||||||||||||  ||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  38561431 aagtttatcttaaaatttgtatattctata--aaatagataactttttaataataattggtgttttccaatgcaaagttgctacattta 38561345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 1 - 298
Target Start/End: Complemental strand, 38522471 - 38522174
Alignment:
Q  1 ttgcacgtgcaataatcaaaagtccaaagattttgttacttgatgaggcaacaagtgcattagatgcagaatcagagagagttgttcaagatgcattaga 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38522471 ttgcacgtgcaataatcaaaagtccaaagattttgttacttgatgaggcaacaagtgcattagatgcagaatcagagagagttgttcaagatgcattaga 38522372  T
Q  101 taaagtaatggtaaataggaccactgtggttgtggcacatcgtttatctacagttaaaaatgcagatgttattgctgttgtcaagaatggagttatagtt 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||| |||||||||    
T  38522371 taaagtaatggtaaataggaccactgtggttgtggcacatcgtttgtctacaattaaaaatgcagatgttattgctgttgtcaagaatggtgttatagtt 38522272  T
Q  201 gaaaaaggaagacatgaaatacttattaatgttaaagatggattttatgcttccttagtccaacttcatactagtgctaaaacagtataggcttttac 298  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  38522271 gaaaaaggaagacatgaaacacttattaacgttaaagatggattttatgcttccttagtccaacttcatactagtgctaaaacagtataggtttttac 38522174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 343 - 461
Target Start/End: Complemental strand, 35438892 - 35438773
Alignment:
Q  343 tttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtggcaagtttatcttaaaatttgtatattctatattaaatagataacattttaat- 441  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||| |||||||||||| ||||||| |||| ||||||||||| ||||| |||||||     
T  35438892 tttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatggtaagtttatcttataatttgtgtattttatattaaatatataactttttaata 35438793  T
Q  442 aataattggtgttttccaat 461  Q
    || |||||||||||| ||||    
T  35438792 aacaattggtgtttttcaat 35438773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 343 - 478
Target Start/End: Complemental strand, 9516758 - 9516622
Alignment:
Q  343 tttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtggcaagtttatcttaaaatttgtatattctatattaaatagataacattttaat- 441  Q
    ||||||||||||||| ||||||| ||||||||||||||||||| ||| |||||| ||||| || |||| |||| ||||||||||| ||||| |||||||     
T  9516758 tttttctatcatgtgtaaatttgcacatgttaagaaatttaaaatggtaagtttctcttataacttgtgtattttatattaaatatataactttttaata 9516659  T
Q  442 aataattggtgttttccaatacaaagttgctacattt 478  Q
    ||||||||||||||| ||||  |||||| || |||||    
T  9516658 aataattggtgtttttcaatgaaaagttacttcattt 9516622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 342 - 456
Target Start/End: Original strand, 51920431 - 51920546
Alignment:
Q  342 gtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtggcaagtttatcttaaaatttgtatattctatattaaatagataacattttaat 441  Q
    |||||||||||||||||||||||| ||||||||| ||||||||| | | || ||||| ||||||||||||||||  |||||||||| | ||| ||| |||    
T  51920431 gtttttctatcatgtgcaaatttgcacatgttaataaatttaaaatagaaattttatattaaaatttgtatatttaatattaaatataaaacttttgaat 51920530  T
Q  442 -aataattggtgtttt 456  Q
     |||||||| ||||||    
T  51920531 aaataattgttgtttt 51920546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 336 - 474
Target Start/End: Complemental strand, 38812924 - 38812785
Alignment:
Q  336 ttatgggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtggcaagtttatcttaaaatttgtatattctatattaaatagataacat 435  Q
    |||||||||||||||||||||||||||||| |||||||||||| || ||| | | || ||||| || ||| ||||| |||  |||||||||| | ||| |    
T  38812924 ttatgggtttttctatcatgtgcaaatttgcacatgttaagaagttcaaaatagaaattttatattgaaacttgtacatttaatattaaatataaaactt 38812825  T
Q  436 tttaat-aataattggtgttttccaatacaaagttgctac 474  Q
    || ||| |||||||| ||||||| || | |||||| ||||    
T  38812824 ttgaataaataattgttgttttctaagaaaaagttactac 38812785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 343 - 456
Target Start/End: Complemental strand, 13241934 - 13241820
Alignment:
Q  343 tttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtggcaagtttatcttaaaatttgtatattctatattaaatagataacattttaat- 441  Q
    ||||||||||||||| ||||||| ||||||||||||||||||| ||| |||||| || |  || |||| ||||  |||||||||| ||||  |||||||     
T  13241934 tttttctatcatgtgaaaatttgcacatgttaagaaatttaaaatggtaagtttgtcgtgtaacttgtgtatttcatattaaatatataattttttaata 13241835  T
Q  442 aataattggtgtttt 456  Q
    ||||||| |||||||    
T  13241834 aataatttgtgtttt 13241820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 338 - 427
Target Start/End: Complemental strand, 313931 - 313842
Alignment:
Q  338 atgggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtggcaagtttatcttaaaatttgtatattctatattaaata 427  Q
    |||||||||||||||||||||||||||| |||||||||||| |||||||| | || |||| |||  || |||| | || |||||||||||    
T  313931 atgggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttggaacttgtgttttttatattaaata 313842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 340 - 385
Target Start/End: Original strand, 1502718 - 1502763
Alignment:
Q  340 gggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    |||||||||||||||||||||||||| |||||||||||||||||||    
T  1502718 gggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaa 1502763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 340 - 385
Target Start/End: Original strand, 23576412 - 23576457
Alignment:
Q  340 gggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    |||||||||||||||||||||||||| |||||||||||||||||||    
T  23576412 gggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaa 23576457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 340 - 389
Target Start/End: Complemental strand, 30172059 - 30172010
Alignment:
Q  340 gggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtgg 389  Q
    |||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  30172059 gggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtgg 30172010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 340 - 389
Target Start/End: Complemental strand, 30187600 - 30187551
Alignment:
Q  340 gggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtgg 389  Q
    |||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  30187600 gggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtgg 30187551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 339 - 427
Target Start/End: Original strand, 6569982 - 6570070
Alignment:
Q  339 tgggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtggcaagtttatcttaaaatttgtatattctatattaaata 427  Q
    ||||||||||||||||||||||||||| |||||||||||| |||||||| | || |||| |||  || |||| | || |||||||||||    
T  6569982 tgggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttggaacttgtgttttttatattaaata 6570070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 338 - 385
Target Start/End: Complemental strand, 34802149 - 34802102
Alignment:
Q  338 atgggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    |||||||||||||||||||||||||||| |||||||||||| ||||||    
T  34802149 atgggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 34802102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 340 - 387
Target Start/End: Complemental strand, 44918204 - 44918157
Alignment:
Q  340 gggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagt 387  Q
    |||||||||||||||||||||||||  |||||||||||||||||||||    
T  44918204 gggtttttctatcatgtgcaaatttacacatgttaagaaatttaaagt 44918157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 335 - 385
Target Start/End: Complemental strand, 35512910 - 35512860
Alignment:
Q  335 tttatgggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    |||| |||||||||||||||||||||||||| |||||||||||| ||||||    
T  35512910 tttaagggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 35512860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 330 - 479
Target Start/End: Original strand, 39150315 - 39150464
Alignment:
Q  330 tttcttttatgggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtggcaagtttatcttaaaatttgtatattctatattaaataga 429  Q
    |||||| || |||||||||||||||||||||||||| ||||| |||||| |||||||| | || |||  |||  ||||||| | || |||||||||||      
T  39150315 tttcttataagggtttttctatcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaatttgtgttttttatattaaatatg 39150414  T
Q  430 taacattttaat-aataattggtgttttccaatacaaagttgctacattta 479  Q
    |||| ||||||| |||||||| || ||| ||||  |||||| |||| ||||    
T  39150415 taac-ttttaataaataattgttggttttcaatgaaaagttactactttta 39150464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 343 - 440
Target Start/End: Complemental strand, 43909368 - 43909273
Alignment:
Q  343 tttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtggcaagtttatcttaaaatttgtatattctatattaaatagataacattttaa 440  Q
    ||||||||||||||||||||||| ||||  ||| |||||| || ||| |||||| ||||| || |||| |||| ||||||||||| ||||| ||||||    
T  43909368 tttttctatcatgtgcaaatttgcacat--taaaaaattttaaatggtaagtttgtcttataacttgtgtattttatattaaatatataactttttaa 43909273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 340 - 385
Target Start/End: Complemental strand, 6180366 - 6180321
Alignment:
Q  340 gggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    |||||||||||||||||||||||||| |||||||||||| ||||||    
T  6180366 gggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 6180321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 339 - 387
Target Start/End: Complemental strand, 6754652 - 6754604
Alignment:
Q  339 tgggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagt 387  Q
    ||||||||||||||||||||||||||| ||||| |||||| ||||||||    
T  6754652 tgggtttttctatcatgtgcaaatttgcacatgataagaagtttaaagt 6754604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 342 - 382
Target Start/End: Complemental strand, 23591876 - 23591836
Alignment:
Q  342 gtttttctatcatgtgcaaatttgtacatgttaagaaattt 382  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  23591876 gtttttctatcatgtgcaaatttgcacatgttaagaaattt 23591836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 330 - 385
Target Start/End: Original strand, 3168056 - 3168111
Alignment:
Q  330 tttcttttatgggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    ||||||||| |||||||||||||||||||||||||| ||| ||||| || ||||||    
T  3168056 tttcttttaagggtttttctatcatgtgcaaatttgcacacgttaaaaagtttaaa 3168111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 340 - 387
Target Start/End: Complemental strand, 6307682 - 6307635
Alignment:
Q  340 gggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagt 387  Q
    |||||||| ||||||||||||||||| |||||||||||| ||||||||    
T  6307682 gggtttttatatcatgtgcaaatttgcacatgttaagaagtttaaagt 6307635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 342 - 385
Target Start/End: Complemental strand, 16966543 - 16966500
Alignment:
Q  342 gtttttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    |||||||||||||||||| ||||| |||||||||||||||||||    
T  16966543 gtttttctatcatgtgcatatttgaacatgttaagaaatttaaa 16966500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 343 - 385
Target Start/End: Original strand, 5875216 - 5875258
Alignment:
Q  343 tttttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    ||||||||||||||||||||||| |||||||||||| ||||||    
T  5875216 tttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 5875258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 340 - 378
Target Start/End: Complemental strand, 25465338 - 25465300
Alignment:
Q  340 gggtttttctatcatgtgcaaatttgtacatgttaagaa 378  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  25465338 gggtttttctatcatgtgcaaatttgcacatgttaagaa 25465300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 341 - 427
Target Start/End: Original strand, 30288863 - 30288949
Alignment:
Q  341 ggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtggcaagtttatcttaaaatttgtatattctatattaaata 427  Q
    ||||||||||||||||||||||||  |||||||||||| |||||||| | || |||| |||  || |||| | || |||||||||||    
T  30288863 ggtttttctatcatgtgcaaatttacacatgttaagaagtttaaagtagtaattttaacttggaacttgtgttttttatattaaata 30288949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 339 - 385
Target Start/End: Original strand, 30362992 - 30363038
Alignment:
Q  339 tgggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    ||||||||||||||||||||||||||| ||||| ||| |||||||||    
T  30362992 tgggtttttctatcatgtgcaaatttgcacatgataacaaatttaaa 30363038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 339 - 385
Target Start/End: Complemental strand, 36490960 - 36490914
Alignment:
Q  339 tgggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    ||||||||||||||||| ||||||||| |||||||||||| ||||||    
T  36490960 tgggtttttctatcatgagcaaatttgcacatgttaagaagtttaaa 36490914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 343 - 381
Target Start/End: Original strand, 41676561 - 41676599
Alignment:
Q  343 tttttctatcatgtgcaaatttgtacatgttaagaaatt 381  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  41676561 tttttctatcatgtgcaaatttgcacatgttaagaaatt 41676599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 328 - 385
Target Start/End: Complemental strand, 1366239 - 1366182
Alignment:
Q  328 catttcttttatgggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    ||||| ||||| | |||||||||||||||||||||||  |||||| ||||||||||||    
T  1366239 cattttttttaagagtttttctatcatgtgcaaatttacacatgtaaagaaatttaaa 1366182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 342 - 443
Target Start/End: Original strand, 29635748 - 29635849
Alignment:
Q  342 gtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtggcaagtttatcttaaaatttgtatattctatattaaatagataacattttaat 441  Q
    ||||||||||||| |  ||||||||||||||||| ||||||||| | | || ||||| || ||| ||||||||| | |||| || | ||||| |||||||    
T  29635748 gtttttctatcatttataaatttgtacatgttaaaaaatttaaaatagtaactttatattgaaacttgtatattttgtatttaacatataactttttaat 29635847  T
Q  442 aa 443  Q
    ||    
T  29635848 aa 29635849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 340 - 385
Target Start/End: Original strand, 39310784 - 39310829
Alignment:
Q  340 gggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    |||||||||||||||||||||||||| ||||||||| || ||||||    
T  39310784 gggtttttctatcatgtgcaaatttgcacatgttaaaaagtttaaa 39310829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 340 - 385
Target Start/End: Complemental strand, 51382494 - 51382449
Alignment:
Q  340 gggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    ||||||||||||||||||||| |||| |||||||||||| ||||||    
T  51382494 gggtttttctatcatgtgcaactttgcacatgttaagaagtttaaa 51382449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 342 - 479
Target Start/End: Original strand, 2222236 - 2222372
Alignment:
Q  342 gtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtggcaagtttatcttaaaatttgtatattct-atattaaatagataacattttaa 440  Q
    |||||||||||||||| ||||||  ||||||||||||||||||  |   || |||||||||||| |||| |||| | ||||||||||| || | ||||||    
T  2222236 gtttttctatcatgtgaaaatttacacatgttaagaaatttaa--taataactttatcttaaaacttgtgtattatgatattaaatagttagctttttaa 2222333  T
Q  441 t-aataattggtgttttccaatacaaagttgctacattta 479  Q
    | |||||||  |||||| ||||| |||||| |||| ||||    
T  2222334 taaataattattgtttttcaata-aaagttactactttta 2222372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 340 - 432
Target Start/End: Complemental strand, 4249386 - 4249294
Alignment:
Q  340 gggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtggcaagtttatcttaaaatttgtatattctatattaaatagataa 432  Q
    ||||||||||| |||||||||||| | ||||||||| || ||||||||   |||||||| || ||| |||| |||| || |||||||| ||||    
T  4249386 gggtttttctaacatgtgcaaattcgcacatgttaataagtttaaagttttaagtttatattgaaacttgtgtattttacattaaatatataa 4249294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 340 - 432
Target Start/End: Complemental strand, 4249710 - 4249618
Alignment:
Q  340 gggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtggcaagtttatcttaaaatttgtatattctatattaaatagataa 432  Q
    ||||||||||| |||||||||||| | ||||||||| || ||||||||   |||||||| || ||| |||| |||| || |||||||| ||||    
T  4249710 gggtttttctaacatgtgcaaattcgcacatgttaataagtttaaagttttaagtttatattgaaacttgtgtattttacattaaatatataa 4249618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 340 - 432
Target Start/End: Complemental strand, 4250034 - 4249942
Alignment:
Q  340 gggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtggcaagtttatcttaaaatttgtatattctatattaaatagataa 432  Q
    ||||||||||| |||||||||||| | ||||||||| || ||||||||   |||||||| || ||| |||| |||| || |||||||| ||||    
T  4250034 gggtttttctaacatgtgcaaattcgcacatgttaataagtttaaagttttaagtttatattgaaacttgtgtattttacattaaatatataa 4249942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 341 - 385
Target Start/End: Complemental strand, 13322055 - 13322011
Alignment:
Q  341 ggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    ||||||||||||||||||||||||| | |||||||||| ||||||    
T  13322055 ggtttttctatcatgtgcaaatttgcatatgttaagaagtttaaa 13322011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 340 - 479
Target Start/End: Complemental strand, 17919633 - 17919494
Alignment:
Q  340 gggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtggcaagtttatcttaaaatttgtatattctatattaaatagataacatttta 439  Q
    |||||||||||||||||||||||||| ||||  |||||| |||||||| | || |||  |||  ||||||| | || |||||||||||  |||| |||||    
T  17919633 gggtttttctatcatgtgcaaatttgcacataataagaagtttaaagtagtaactttgacttggaatttgtgttttttatattaaatatgtaac-tttta 17919535  T
Q  440 at-aataattggtgttttccaatacaaagttgctacattta 479  Q
    || |||||||| || ||| ||||  |||||| |||| ||||    
T  17919534 ataaataattgttggttttcaatgaaaagttactactttta 17919494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 340 - 427
Target Start/End: Complemental strand, 3096389 - 3096302
Alignment:
Q  340 gggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtggcaagtttatcttaaaatttgtatattctatattaaata 427  Q
    |||||||||||| ||||||||||||| ||||| ||| |||||||||||   || |||| ||||||| || | | || |||||||||||    
T  3096389 gggtttttctattatgtgcaaatttgcacatgataaaaaatttaaagtaataattttaacttaaaacttatgttttttatattaaata 3096302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 342 - 441
Target Start/End: Original strand, 3121836 - 3121933
Alignment:
Q  342 gtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtggcaagtttatcttaaaatttgtatattctatattaaatagataacattttaat 441  Q
    |||||| ||| ||||| |||||||||||  |||||||||||||||||| |||||| | ||  || |||| |||| |||| |||||||||||| |||||||    
T  3121836 gtttttttattatgtgtaaatttgtacactttaagaaatttaaagtggtaagtttgt-ttggaacttgtctattttata-taaatagataactttttaat 3121933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 340 - 387
Target Start/End: Complemental strand, 41625009 - 41624962
Alignment:
Q  340 gggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagt 387  Q
    |||||||||||||||||||||||||| | ||| |||||| ||||||||    
T  41625009 gggtttttctatcatgtgcaaatttgcatatgataagaagtttaaagt 41624962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 342 - 443
Target Start/End: Original strand, 7519996 - 7520098
Alignment:
Q  342 gtttttctatcatgtgcaaatttgt-acatgttaagaaatttaaagtggcaagtttatcttaaaatttgtatattctatattaaatagataacattttaa 440  Q
    |||||||||||||||||||| || | |||||||||||| |||||| |  ||| |||   || ||||||||| ||| | |||| |||| ||||||||||||    
T  7519996 gtttttctatcatgtgcaaaattttcacatgttaagaagtttaaaataacaactttgcattgaaatttgtacattttgtatttaatatataacattttaa 7520095  T
Q  441 taa 443  Q
    |||    
T  7520096 taa 7520098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 341 - 427
Target Start/End: Complemental strand, 10896532 - 10896446
Alignment:
Q  341 ggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtggcaagtttatcttaaaatttgtatattctatattaaata 427  Q
    ||||||||||||||||| ||| ||| |||||||||||| |||||||| | || |||| |||  || |||| | || |||||||||||    
T  10896532 ggtttttctatcatgtgtaaaattgcacatgttaagaagtttaaagtagtaactttaactttgaacttgtgttttttatattaaata 10896446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 342 - 443
Target Start/End: Complemental strand, 5057180 - 5057079
Alignment:
Q  342 gtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtggcaagtttatcttaaaatttgtatattctatattaaatagataacattttaat 441  Q
    |||||||||| || |||||||||| | ||||| | || |||||||||| || |||  ||| ||| ||||| ||| ||||||||||| ||| | |||||||    
T  5057180 gtttttctattatatgcaaatttgcaaatgttcaaaagtttaaagtggtaactttgacttgaaacttgtacattttatattaaatatatatctttttaat 5057081  T
Q  442 aa 443  Q
    ||    
T  5057080 aa 5057079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 341 - 378
Target Start/End: Original strand, 5879102 - 5879139
Alignment:
Q  341 ggtttttctatcatgtgcaaatttgtacatgttaagaa 378  Q
    ||||||||||||||||| ||||||| ||||||||||||    
T  5879102 ggtttttctatcatgtgtaaatttgcacatgttaagaa 5879139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 385
Target Start/End: Complemental strand, 22167515 - 22167470
Alignment:
Q  340 gggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    ||||||| |||||||||||||||||| ||||| |||||| ||||||    
T  22167515 gggttttcctatcatgtgcaaatttgcacatgataagaagtttaaa 22167470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 337 - 385
Target Start/End: Complemental strand, 3611934 - 3611886
Alignment:
Q  337 tatgggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    |||| ||||||||||||| || ||||||||||||||||| || ||||||    
T  3611934 tatgagtttttctatcatatgaaaatttgtacatgttaaaaagtttaaa 3611886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 343 - 427
Target Start/End: Complemental strand, 9662073 - 9661989
Alignment:
Q  343 tttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtggcaagtttatcttaaaatttgtatattctatattaaata 427  Q
    |||||||| |||||||||||||| |||||||||| |   |||||| | |||||||| ||  || |||| ||||||| ||||||||    
T  9662073 tttttctaacatgtgcaaatttgcacatgttaaggatactaaagtagtaagtttatattggaacttgtgtattctacattaaata 9661989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 329 - 385
Target Start/End: Complemental strand, 25532400 - 25532344
Alignment:
Q  329 atttcttttatgggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    ||||| |||||| ||||||||||||| ||||||||||  |||||||| || ||||||    
T  25532400 atttcctttatgagtttttctatcatatgcaaatttgcgcatgttaaaaagtttaaa 25532344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 403 - 443
Target Start/End: Original strand, 33048173 - 33048213
Alignment:
Q  403 aaatttgtatattctatattaaatagataacattttaataa 443  Q
    ||||||||||||| ||||||||||| ||||| |||||||||    
T  33048173 aaatttgtatattttatattaaatatataactttttaataa 33048213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 120; Significance: 4e-61; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 340 - 479
Target Start/End: Complemental strand, 32117994 - 32117855
Alignment:
Q  340 gggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtggcaagtttatcttaaaatttgtatattctatattaaatagataacatttta 439  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| |||||    
T  32117994 gggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaagtggcaagtttatcttgaaacttgtatattctatattaaatagataacttttta 32117895  T
Q  440 ataataattggtgttttccaatacaaagttgctacattta 479  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  32117894 ataataattggtgttttccaatgcaaagttgctacattta 32117855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 343 - 461
Target Start/End: Original strand, 7899487 - 7899606
Alignment:
Q  343 tttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtggcaagtttatcttaaaatttgtatattctatattaaatagataacattttaat- 441  Q
    ||||||||||||||||||||||| ||||||||| ||||||||| ||| |||||| ||||| || ||||||||| ||||||||||| |||||||||||||     
T  7899487 tttttctatcatgtgcaaatttgcacatgttaaaaaatttaaaatggtaagtttgtcttataacttgtatattttatattaaatatataacattttaata 7899586  T
Q  442 aataattggtgttttccaat 461  Q
    ||| ||||||||||| ||||    
T  7899587 aattattggtgtttttcaat 7899606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 334 - 427
Target Start/End: Original strand, 3561870 - 3561963
Alignment:
Q  334 ttttatgggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtggcaagtttatcttaaaatttgtatattctatattaaata 427  Q
    |||||||||||||||||||||||||||||||| |||||||||||| |||||||| | || |||| ||||||| |||| | || |||||||||||    
T  3561870 ttttatgggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttatattaaata 3561963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 341 - 443
Target Start/End: Original strand, 8420832 - 8420934
Alignment:
Q  341 ggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtggcaagtttatcttaaaatttgtatattctatattaaatagataacattttaa 440  Q
    |||||||||||||||  |||||||||||||||||| ||||||||| ||| |||||||||||| || |||| | || ||||||||||| | ||| ||||||    
T  8420832 ggtttttctatcatgaacaaatttgtacatgttaaaaaatttaaaatggtaagtttatcttataacttgtgtcttttatattaaatatacaactttttaa 8420931  T
Q  441 taa 443  Q
    |||    
T  8420932 taa 8420934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 337 - 385
Target Start/End: Complemental strand, 33072164 - 33072116
Alignment:
Q  337 tatgggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  33072164 tatgggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaa 33072116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 337 - 427
Target Start/End: Original strand, 39757105 - 39757195
Alignment:
Q  337 tatgggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtggcaagtttatcttaaaatttgtatattctatattaaata 427  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||| | | || |||| ||| |||||||| | || |||||||||||    
T  39757105 tatgggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagtaactttaacttgaaatttgtgttttttatattaaata 39757195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 328 - 479
Target Start/End: Complemental strand, 9332153 - 9332002
Alignment:
Q  328 catttcttttatgggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtggcaagtttatcttaaaatttgtatattctatattaaata 427  Q
    ||||| ||||| |||||||||||||||||||||||||| |||||||||||| |||||| | | || |||  ||| ||| |||| | || |||||||||||    
T  9332153 cattttttttaagggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaattagtaactttgacttgaaacttgtgttttttatattaaata 9332054  T
Q  428 gataacattttaataataattggtgttttccaatacaaagttgctacattta 479  Q
      |||||||| |  |||||||| || ||| ||||  |||||| |||| ||||    
T  9332053 tgtaacatttaatcaataattgttgattttcaatgaaaagttactactttta 9332002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 338 - 385
Target Start/End: Complemental strand, 33343170 - 33343123
Alignment:
Q  338 atgggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||    
T  33343170 atgggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaa 33343123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 338 - 385
Target Start/End: Complemental strand, 34270443 - 34270396
Alignment:
Q  338 atgggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||    
T  34270443 atgggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaa 34270396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 338 - 444
Target Start/End: Original strand, 23982751 - 23982857
Alignment:
Q  338 atgggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtggcaagtttatcttaaaatttgtatattctatattaaatagataacattt 437  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||||||| | || |||  |||  || |||| |||| |||||||||||  |||  |||    
T  23982751 atgggtttttctatcatgtgcaaatttgcacacgttaagaaatttaaagtagtaactttgacttggaacttgtgtattttatattaaatatttaagtttt 23982850  T
Q  438 taataat 444  Q
    |||||||    
T  23982851 taataat 23982857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 341 - 427
Target Start/End: Original strand, 36548459 - 36548545
Alignment:
Q  341 ggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtggcaagtttatcttaaaatttgtatattctatattaaata 427  Q
    ||||||| ||||||||||||||||| |||||||||||| |||||| | | || |||  |||||||||||||| || |||||||||||    
T  36548459 ggtttttttatcatgtgcaaatttgcacatgttaagaagtttaaattagtaactttgacttaaaatttgtattttttatattaaata 36548545  T

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Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 340 - 385
Target Start/End: Complemental strand, 46290190 - 46290145
Alignment:
Q  340 gggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    |||||||||||||||||||||||||| |||||||||||||||||||    
T  46290190 gggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaa 46290145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 343 - 461
Target Start/End: Complemental strand, 2276853 - 2276733
Alignment:
Q  343 tttttctatcatgtgcaaatttgtacatgttaa-gaaatttaaagtggcaagtttatcttaaaatttgtatattctatattaaatagataacattttaat 441  Q
    |||||||||||||||| |||||| |||| |||| ||||||||||  || | | || | || ||| |||| |||| ||||||||||||||||| |||||||    
T  2276853 tttttctatcatgtgcgaatttgaacatattaaagaaatttaaatcggtatgcttgtgttgaaacttgtgtattttatattaaatagataactttttaat 2276754  T
Q  442 -aataattggtgttttccaat 461  Q
     ||||||||||||||| ||||    
T  2276753 aaataattggtgtttttcaat 2276733  T

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Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 339 - 387
Target Start/End: Original strand, 47457458 - 47457506
Alignment:
Q  339 tgggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagt 387  Q
    ||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  47457458 tgggtttttctatcatgtgcaaatttgcacatgttaaaaaatttaaagt 47457506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 338 - 385
Target Start/End: Original strand, 820537 - 820584
Alignment:
Q  338 atgggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    |||||||||||||||||||||||||||| |||||||||||| ||||||    
T  820537 atgggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 820584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 342 - 385
Target Start/End: Original strand, 29692540 - 29692583
Alignment:
Q  342 gtttttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    ||||||||||||||||||||||||||||||||||||| ||||||    
T  29692540 gtttttctatcatgtgcaaatttgtacatgttaagaagtttaaa 29692583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 341 - 443
Target Start/End: Original strand, 22041725 - 22041827
Alignment:
Q  341 ggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtggcaagtttatcttaaaatttgtatattctatattaaatagataacattttaa 440  Q
    ||||||||||||||||||||||||| || ||||||||| || ||| |   || ||||| ||||||||| | || | ||||||||||| ||||| ||||||    
T  22041725 ggtttttctatcatgtgcaaatttgcacttgttaagaagttcaaaatactaaatttatattaaaatttatgtactgtatattaaatatataactttttaa 22041824  T
Q  441 taa 443  Q
    |||    
T  22041825 taa 22041827  T

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Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 343 - 385
Target Start/End: Original strand, 26050462 - 26050504
Alignment:
Q  343 tttttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    ||||||||||||||||||||||| |||||||||||||||||||    
T  26050462 tttttctatcatgtgcaaatttgcacatgttaagaaatttaaa 26050504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 343 - 385
Target Start/End: Original strand, 26059821 - 26059863
Alignment:
Q  343 tttttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    ||||||||||||||||||||||| |||||||||||||||||||    
T  26059821 tttttctatcatgtgcaaatttgcacatgttaagaaatttaaa 26059863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 340 - 385
Target Start/End: Complemental strand, 4969953 - 4969908
Alignment:
Q  340 gggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    |||||||||||||||||||||||||| |||||||||||| ||||||    
T  4969953 gggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 4969908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 334 - 427
Target Start/End: Original strand, 5909274 - 5909367
Alignment:
Q  334 ttttatgggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtggcaagtttatcttaaaatttgtatattctatattaaata 427  Q
    |||||||||||||||||||||||| ||||||| ||||| |||||| |||||||| | || |||  ||| ||| |||| | || |||||||||||    
T  5909274 ttttatgggtttttctatcatgtgtaaatttgcacatgataagaagtttaaagtagtaactttgacttgaaacttgtgttttttatattaaata 5909367  T

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Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 342 - 387
Target Start/End: Original strand, 22334021 - 22334066
Alignment:
Q  342 gtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagt 387  Q
    ||||||| ||||||||||||||||||||||||||||| ||||||||    
T  22334021 gtttttcaatcatgtgcaaatttgtacatgttaagaagtttaaagt 22334066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 340 - 387
Target Start/End: Original strand, 7040250 - 7040297
Alignment:
Q  340 gggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagt 387  Q
    |||||||| ||||||||||||||||| |||||||||||| ||||||||    
T  7040250 gggtttttatatcatgtgcaaatttgcacatgttaagaagtttaaagt 7040297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 340 - 387
Target Start/End: Complemental strand, 7170182 - 7170135
Alignment:
Q  340 gggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagt 387  Q
    |||||||||||||||||||||||||| ||||| |||||| ||||||||    
T  7170182 gggtttttctatcatgtgcaaatttgcacatgataagaagtttaaagt 7170135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 340 - 387
Target Start/End: Complemental strand, 19889520 - 19889473
Alignment:
Q  340 gggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagt 387  Q
    |||||||||||||||||||||||||| ||||| |||||| ||||||||    
T  19889520 gggtttttctatcatgtgcaaatttgcacatgataagaagtttaaagt 19889473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 340 - 427
Target Start/End: Original strand, 24462953 - 24463040
Alignment:
Q  340 gggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtggcaagtttatcttaaaatttgtatattctatattaaata 427  Q
    |||| ||||||||||||||||||||| |||||||||||| |||||| |   || |||  |||||| |||||| ||| |||||||||||    
T  24462953 gggtatttctatcatgtgcaaatttgcacatgttaagaagtttaaaataataactttgacttaaagtttgtacattttatattaaata 24463040  T

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Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 342 - 385
Target Start/End: Original strand, 25709399 - 25709442
Alignment:
Q  342 gtttttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    |||||||||||||||||||||||| |||||||||||| ||||||    
T  25709399 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 25709442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 344 - 387
Target Start/End: Original strand, 41331458 - 41331501
Alignment:
Q  344 ttttctatcatgtgcaaatttgtacatgttaagaaatttaaagt 387  Q
    |||||||||||||||||||||| ||||| |||||||||||||||    
T  41331458 ttttctatcatgtgcaaatttgcacatgataagaaatttaaagt 41331501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 337 - 427
Target Start/End: Complemental strand, 5833538 - 5833448
Alignment:
Q  337 tatgggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtggcaagtttatcttaaaatttgtatattctatattaaata 427  Q
    ||||| ||||||||||||||||||||||| ||||||||| || |||||||  | || ||  ||||| || ||||  |||||||||||||||    
T  5833538 tatggatttttctatcatgtgcaaatttgcacatgttaaaaagtttaaagcagtaacttcgtcttagaacttgtgcattctatattaaata 5833448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 358 - 427
Target Start/End: Complemental strand, 12624798 - 12624730
Alignment:
Q  358 caaatttgtacatgttaagaaatttaaagtggcaagtttatcttaaaatttgtatattctatattaaata 427  Q
    |||||||| ||||||||||||||||||| ||| |||||| |||| ||| |||| |||| |||||||||||    
T  12624798 caaatttgcacatgttaagaaatttaaaatggtaagtttgtctt-aaacttgtgtattttatattaaata 12624730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 344 - 385
Target Start/End: Original strand, 18102232 - 18102273
Alignment:
Q  344 ttttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    |||||||||||||||||||||| |||||||||||| ||||||    
T  18102232 ttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 18102273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 341 - 385
Target Start/End: Original strand, 8091311 - 8091355
Alignment:
Q  341 ggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    ||||||||||||||||||||||||  |||||||||||| ||||||    
T  8091311 ggtttttctatcatgtgcaaatttacacatgttaagaagtttaaa 8091355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 337 - 385
Target Start/End: Original strand, 36032538 - 36032586
Alignment:
Q  337 tatgggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    ||||||||||||||| ||||| ||||||  |||||||||||||||||||    
T  36032538 tatgggtttttctattatgtgaaaattttcacatgttaagaaatttaaa 36032586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 342 - 385
Target Start/End: Complemental strand, 8595075 - 8595032
Alignment:
Q  342 gtttttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    |||||||||||||||||||||||  |||||||||||| ||||||    
T  8595075 gtttttctatcatgtgcaaatttacacatgttaagaagtttaaa 8595032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 342 - 385
Target Start/End: Original strand, 29398134 - 29398177
Alignment:
Q  342 gtttttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    ||||||||||||||| |||||||| |||||||||||| ||||||    
T  29398134 gtttttctatcatgttcaaatttgcacatgttaagaagtttaaa 29398177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 384
Target Start/End: Complemental strand, 44807078 - 44807035
Alignment:
Q  341 ggtttttctatcatgtgcaaatttgtacatgttaagaaatttaa 384  Q
    ||||||||||||||||||||||||| ||||| ||| ||||||||    
T  44807078 ggtttttctatcatgtgcaaatttgcacatgataataaatttaa 44807035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 342 - 385
Target Start/End: Complemental strand, 45501637 - 45501594
Alignment:
Q  342 gtttttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    |||||||||||||||||||||||| |||| ||||||| ||||||    
T  45501637 gtttttctatcatgtgcaaatttgcacatcttaagaagtttaaa 45501594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 337 - 427
Target Start/End: Original strand, 384426 - 384515
Alignment:
Q  337 tatgggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtggcaagtttatcttaaaatttgtatattctatattaaata 427  Q
    |||| ||||||||||||| |||||||||| |||||||||||| |||||||| | || |||| |||  || |||| | || |||||||||||    
T  384426 tatgagtttttctatcat-tgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttggaacttgttttttttatattaaata 384515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 343 - 385
Target Start/End: Original strand, 44473513 - 44473555
Alignment:
Q  343 tttttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    ||||| ||||||||||||||||| |||||||||||| ||||||    
T  44473513 tttttttatcatgtgcaaatttgaacatgttaagaagtttaaa 44473555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 344 - 433
Target Start/End: Complemental strand, 8170697 - 8170608
Alignment:
Q  344 ttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtggcaagtttatcttaaaatttgtatattctatattaaatagataac 433  Q
    |||| |||||||| |||||||  ||||||||| || |||||||| | || |||| ||||||| || ||| || ||||||||||| |||||    
T  8170697 ttttttatcatgtacaaatttacacatgttaaaaagtttaaagtagtaactttaacttaaaacttttattttttatattaaatatataac 8170608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 385
Target Start/End: Original strand, 12085929 - 12085974
Alignment:
Q  340 gggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    |||||||||||||||||||||||||| ||||  |||||| ||||||    
T  12085929 gggtttttctatcatgtgcaaatttgcacataataagaagtttaaa 12085974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 377 - 461
Target Start/End: Complemental strand, 19868257 - 19868172
Alignment:
Q  377 aaatttaaagtggcaagtttatcttaaaatttgtatattctatattaaatagataacattttaat-aataattggtgttttccaat 461  Q
    ||||||| | ||| |||||| |||| ||| |||| |||| ||||||||||| ||||| |||| || ||||||||||||||| ||||    
T  19868257 aaatttagaatggtaagtttgtcttgaaacttgtgtattttatattaaatatataactttttgataaataattggtgtttttcaat 19868172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 342 - 387
Target Start/End: Complemental strand, 24250676 - 24250631
Alignment:
Q  342 gtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagt 387  Q
    |||||||||||||||| ||||||| ||||| |||||| ||||||||    
T  24250676 gtttttctatcatgtggaaatttgaacatgataagaagtttaaagt 24250631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 344 - 385
Target Start/End: Complemental strand, 26037269 - 26037228
Alignment:
Q  344 ttttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    |||||||||||||||||||||| | |||||||||| ||||||    
T  26037269 ttttctatcatgtgcaaatttgcagatgttaagaagtttaaa 26037228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 97; Significance: 2e-47; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 335 - 479
Target Start/End: Original strand, 13515919 - 13516063
Alignment:
Q  335 tttatgggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtggcaagtttatcttaaaatttgtatattctatattaaatagataaca 434  Q
    ||||||||||||||||||||||| ||||||| ||||||||| ||||||||||||| ||||||||||| ||| || |||||||||||||||||||||||      
T  13515919 tttatgggtttttctatcatgtgtaaatttgcacatgttaacaaatttaaagtggaaagtttatcttgaaacttatatattctatattaaatagataatt 13516018  T
Q  435 ttttaataataattggtgttttccaatacaaagttgctacattta 479  Q
    ||||||||||||||| | ||||||||| |||||||||||||||||    
T  13516019 ttttaataataattgatattttccaatgcaaagttgctacattta 13516063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 342 - 456
Target Start/End: Original strand, 32019984 - 32020099
Alignment:
Q  342 gtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtggcaagtttatcttaaaatttgtatattctatattaaatagataac-attttaa 440  Q
    |||||||||||||||||||||||| ||||||||||||||||||| ||| |||||| ||||  || |||| ||||||||||||||||||||||  ||||||    
T  32019984 gtttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatggtaagtttgtcttggaacttgtgtattctatattaaatagataacttttttaa 32020083  T
Q  441 taataattggtgtttt 456  Q
    ||||||| ||||||||    
T  32020084 taataatcggtgtttt 32020099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 337 - 387
Target Start/End: Complemental strand, 2795706 - 2795656
Alignment:
Q  337 tatgggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagt 387  Q
    ||||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  2795706 tatgggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagt 2795656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 340 - 385
Target Start/End: Complemental strand, 30839961 - 30839916
Alignment:
Q  340 gggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    |||||||||||||||||||||||||| |||||||||||||||||||    
T  30839961 gggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaa 30839916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 340 - 385
Target Start/End: Complemental strand, 36597759 - 36597714
Alignment:
Q  340 gggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    |||||||||||||||||||||||||| |||||||||||||||||||    
T  36597759 gggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaa 36597714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 340 - 427
Target Start/End: Complemental strand, 4047592 - 4047505
Alignment:
Q  340 gggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtggcaagtttatcttaaaatttgtatattctatattaaata 427  Q
    |||||||||||||||||||||||||| |||||||||||| |||||||| | || |||| |||  || |||| | || |||||||||||    
T  4047592 gggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttggaacttgtgttttttatattaaata 4047505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 342 - 385
Target Start/End: Original strand, 31365950 - 31365993
Alignment:
Q  342 gtttttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    ||||||||||||||||||||||||||||||||||||| ||||||    
T  31365950 gtttttctatcatgtgcaaatttgtacatgttaagaagtttaaa 31365993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 344 - 427
Target Start/End: Original strand, 31567493 - 31567576
Alignment:
Q  344 ttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtggcaagtttatcttaaaatttgtatattctatattaaata 427  Q
    ||||||||||| |||||||||| ||||||||| ||||||||| ||| || ||| |||| ||||||||  ||| |||||||||||    
T  31567493 ttttctatcatatgcaaatttgcacatgttaaaaaatttaaaatggtaattttgtcttgaaatttgttcattttatattaaata 31567576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 337 - 427
Target Start/End: Original strand, 14466489 - 14466579
Alignment:
Q  337 tatgggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtggcaagtttatcttaaaatttgtatattctatattaaata 427  Q
    ||||| ||||||||||||||||||||||  |||||||||||| |||||||| | || |||| ||| ||| |||| | || |||||||||||    
T  14466489 tatggatttttctatcatgtgcaaatttagacatgttaagaagtttaaagtagtaactttaacttgaaacttgtgttttttatattaaata 14466579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 340 - 385
Target Start/End: Complemental strand, 3398400 - 3398355
Alignment:
Q  340 gggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    |||||||||||||||||||||||||| |||||||||||| ||||||    
T  3398400 gggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 3398355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 340 - 385
Target Start/End: Complemental strand, 6863736 - 6863691
Alignment:
Q  340 gggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    |||||||||||||||||||||||||| ||||||||| |||||||||    
T  6863736 gggtttttctatcatgtgcaaatttgcacatgttaaaaaatttaaa 6863691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 342 - 427
Target Start/End: Original strand, 23995416 - 23995501
Alignment:
Q  342 gtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtggcaagtttatcttaaaatttgtatattctatattaaata 427  Q
    |||||||||| |||||||||||||||||||||||||| |||||| | | || ||||| || ||| ||||| ||| | |||||||||    
T  23995416 gtttttctattatgtgcaaatttgtacatgttaagaagtttaaaatagtaattttatattgaaacttgtacattttgtattaaata 23995501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 343 - 427
Target Start/End: Complemental strand, 34578188 - 34578104
Alignment:
Q  343 tttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtggcaagtttatcttaaaatttgtatattctatattaaata 427  Q
    ||||| ||||||||||||||||| ||||||||| || |||||| | | || |||| ||||||| |||||| || |||||||||||    
T  34578188 tttttttatcatgtgcaaatttgcacatgttaaaaagtttaaaatagtaactttaacttaaaacttgtattttttatattaaata 34578104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 340 - 387
Target Start/End: Original strand, 8103578 - 8103625
Alignment:
Q  340 gggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagt 387  Q
    |||||||||||||||||||||||||| ||||| |||||| ||||||||    
T  8103578 gggtttttctatcatgtgcaaatttgcacatgataagaagtttaaagt 8103625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 340 - 387
Target Start/End: Complemental strand, 11636911 - 11636864
Alignment:
Q  340 gggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagt 387  Q
    |||||||||||||||||||||||||| ||||| |||||| ||||||||    
T  11636911 gggtttttctatcatgtgcaaatttgcacatgataagaagtttaaagt 11636864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 342 - 375
Target Start/End: Original strand, 15240950 - 15240983
Alignment:
Q  342 gtttttctatcatgtgcaaatttgtacatgttaa 375  Q
    ||||||||||||||||||||||||||||||||||    
T  15240950 gtttttctatcatgtgcaaatttgtacatgttaa 15240983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 342 - 375
Target Start/End: Original strand, 19743247 - 19743280
Alignment:
Q  342 gtttttctatcatgtgcaaatttgtacatgttaa 375  Q
    ||||||||||||||||||||||||||||||||||    
T  19743247 gtttttctatcatgtgcaaatttgtacatgttaa 19743280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 344 - 385
Target Start/End: Complemental strand, 30893805 - 30893764
Alignment:
Q  344 ttttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    |||||||||||||||||||||| |||||||||||| ||||||    
T  30893805 ttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 30893764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 343 - 387
Target Start/End: Complemental strand, 41350379 - 41350335
Alignment:
Q  343 tttttctatcatgtgcaaatttgtacatgttaagaaatttaaagt 387  Q
    ||||| ||||||||||||||||| |||||||||||| ||||||||    
T  41350379 tttttttatcatgtgcaaatttgcacatgttaagaagtttaaagt 41350335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 342 - 385
Target Start/End: Original strand, 12641993 - 12642036
Alignment:
Q  342 gtttttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    |||||||||| ||||||||||||| |||||||||||| ||||||    
T  12641993 gtttttctataatgtgcaaatttgcacatgttaagaagtttaaa 12642036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 342 - 385
Target Start/End: Complemental strand, 35469732 - 35469689
Alignment:
Q  342 gtttttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    |||||||||||||||| ||||||| ||||||||| |||||||||    
T  35469732 gtttttctatcatgtgtaaatttgcacatgttaaaaaatttaaa 35469689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 340 - 370
Target Start/End: Complemental strand, 7401525 - 7401495
Alignment:
Q  340 gggtttttctatcatgtgcaaatttgtacat 370  Q
    |||||||||||||||||||||||||||||||    
T  7401525 gggtttttctatcatgtgcaaatttgtacat 7401495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 341 - 474
Target Start/End: Original strand, 18841704 - 18841838
Alignment:
Q  341 ggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtggcaagtttatcttaaaatttgtatattctatattaaatagataacattttaa 440  Q
    ||||||| |||| |||||||||||| | ||||||| || |||||| | | || ||| | || ||||||||| |||  |||||||||| | ||| ||| ||    
T  18841704 ggtttttttatcgtgtgcaaatttgcatatgttaaaaagtttaaaatagaaattttgtattgaaatttgtacatttaatattaaatataaaacttttgaa 18841803  T
Q  441 t-aataattggtgttttccaatacaaagttgctac 474  Q
    | |||||||| |||||||||| | |||||| ||||    
T  18841804 taaataattgttgttttccaaaaaaaagttactac 18841838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 341 - 379
Target Start/End: Complemental strand, 29766346 - 29766308
Alignment:
Q  341 ggtttttctatcatgtgcaaatttgtacatgttaagaaa 379  Q
    |||||||||||||||||||| |||| |||||||||||||    
T  29766346 ggtttttctatcatgtgcaagtttgcacatgttaagaaa 29766308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 335 - 376
Target Start/End: Complemental strand, 31705114 - 31705073
Alignment:
Q  335 tttatgggtttttctatcatgtgcaaatttgtacatgttaag 376  Q
    ||||||| |||||||| |||||||||||||| ||||||||||    
T  31705114 tttatggatttttctaacatgtgcaaatttgcacatgttaag 31705073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 342 - 478
Target Start/End: Complemental strand, 40166459 - 40166323
Alignment:
Q  342 gtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtggcaagtttatcttaaaatttgtatattctatattaaatagataacattttaat 441  Q
    |||||||||| ||||||||||||| | ||||||| |||| |||| | |||| | | | || ||| ||||| ||| | ||||||||| ||||| |||| ||    
T  40166459 gtttttctattatgtgcaaatttgca-atgttaataaatctaaattagcaactatgtattgaaacttgtacattttgtattaaatatataactttttgat 40166361  T
Q  442 -aataattggtgttttccaatacaaagttgctacattt 478  Q
     |||||||| |||||| ||||| ||| ||| |||||||    
T  40166360 aaataattgttgtttttcaataaaaacttgttacattt 40166323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 335 - 387
Target Start/End: Complemental strand, 11376145 - 11376093
Alignment:
Q  335 tttatgggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagt 387  Q
    |||||| |||||||||||||||| |||||| |||||| ||| || ||||||||    
T  11376145 tttatgagtttttctatcatgtgtaaatttatacatgataaaaagtttaaagt 11376093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 343 - 387
Target Start/End: Original strand, 16174623 - 16174667
Alignment:
Q  343 tttttctatcatgtgcaaatttgtacatgttaagaaatttaaagt 387  Q
    |||||||||||| |||||||||| ||||  |||||||||||||||    
T  16174623 tttttctatcatttgcaaatttgcacatcataagaaatttaaagt 16174667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 407 - 454
Target Start/End: Complemental strand, 18150527 - 18150479
Alignment:
Q  407 ttgtatattctatattaaatagataacattttaat-aataattggtgtt 454  Q
    ||||||||| | ||||||||| ||||||||||||| |||||||||||||    
T  18150527 ttgtatattttgtattaaatatataacattttaataaataattggtgtt 18150479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 338 - 378
Target Start/End: Original strand, 29855893 - 29855933
Alignment:
Q  338 atgggtttttctatcatgtgcaaatttgtacatgttaagaa 378  Q
    |||| ||||||||||||||| ||||||| ||||||||||||    
T  29855893 atggatttttctatcatgtgtaaatttgcacatgttaagaa 29855933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 345 - 385
Target Start/End: Complemental strand, 40513126 - 40513086
Alignment:
Q  345 tttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    |||||||||||| |||||||| ||||||||| |||||||||    
T  40513126 tttctatcatgtacaaatttgcacatgttaaaaaatttaaa 40513086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 95; Significance: 3e-46; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 341 - 479
Target Start/End: Complemental strand, 27756740 - 27756602
Alignment:
Q  341 ggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtggcaagtttatcttaaaatttgtatattctatattaaatagataacattttaa 440  Q
    ||||||| |||||||| |||||||  | ||||||||||||||||||| |||||||| |||| ||| ||||||||||||||||||||||||||| ||||||    
T  27756740 ggtttttttatcatgtacaaatttacaaatgttaagaaatttaaagtagcaagtttgtcttgaaacttgtatattctatattaaatagataactttttaa 27756641  T
Q  441 taataattggtgttttccaatacaaagttgctacattta 479  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  27756640 taataattggtgttttccaatgcaaagttgctacattta 27756602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 340 - 449
Target Start/End: Original strand, 9326863 - 9326974
Alignment:
Q  340 gggtttttctatcatgtgcaaa--tttgtacatgttaagaaatttaaagtggcaagtttatcttaaaatttgtatattctatattaaatagataacattt 437  Q
    |||||| |||||||||||||||  |||| ||||||||||||||||||| || ||||||||||||  || |||| |||||||||||||||||| ||| |||    
T  9326863 gggtttctctatcatgtgcaaaaatttgcacatgttaagaaatttaaaatgacaagtttatcttggaacttgtgtattctatattaaatagacaactttt 9326962  T
Q  438 taataataattg 449  Q
    ||||||||||||    
T  9326963 taataataattg 9326974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 340 - 449
Target Start/End: Original strand, 9373585 - 9373696
Alignment:
Q  340 gggtttttctatcatgtgcaaa--tttgtacatgttaagaaatttaaagtggcaagtttatcttaaaatttgtatattctatattaaatagataacattt 437  Q
    |||||| |||||||||||||||  |||| ||||||||||||||||||| || ||||||||||||  || |||| |||||||||||||||||| ||| |||    
T  9373585 gggtttctctatcatgtgcaaaaatttgcacatgttaagaaatttaaaatgacaagtttatcttggaacttgtgtattctatattaaatagacaactttt 9373684  T
Q  438 taataataattg 449  Q
    ||||||||||||    
T  9373685 taataataattg 9373696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 340 - 449
Target Start/End: Original strand, 9381897 - 9382008
Alignment:
Q  340 gggtttttctatcatgtgcaaa--tttgtacatgttaagaaatttaaagtggcaagtttatcttaaaatttgtatattctatattaaatagataacattt 437  Q
    |||||| |||||||||||||||  |||| ||||||||||||||||||| || ||||||||||||  || |||| |||||||||||||||||| ||| |||    
T  9381897 gggtttctctatcatgtgcaaaaatttgcacatgttaagaaatttaaaatgacaagtttatcttggaacttgtgtattctatattaaatagacaactttt 9381996  T
Q  438 taataataattg 449  Q
    ||||||||||||    
T  9381997 taataataattg 9382008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 342 - 457
Target Start/End: Complemental strand, 1378195 - 1378080
Alignment:
Q  342 gtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtggcaagtttatcttaaaatttgtatattctatattaaatagataacattttaat 441  Q
    |||||||||||| |||||| |||| ||||||||||||||||||| ||| || |||||||| ||| ||||| |||  |||||||||| |||||||||||||    
T  1378195 gtttttctatcaggtgcaa-tttgcacatgttaagaaatttaaaatggtaaatttatcttgaaacttgtacatttaatattaaatatataacattttaat 1378097  T
Q  442 -aataattggtgttttc 457  Q
     |||||||| |||||||    
T  1378096 aaataattgatgttttc 1378080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 343 - 427
Target Start/End: Complemental strand, 23553747 - 23553663
Alignment:
Q  343 tttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtggcaagtttatcttaaaatttgtatattctatattaaata 427  Q
    ||||||||||||||||||||||| ||||||||| || |||||||| | || |||| |||||||||||||| || |||||||||||    
T  23553747 tttttctatcatgtgcaaatttgcacatgttaaaaagtttaaagtagtaactttaacttaaaatttgtattttttatattaaata 23553663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 343 - 427
Target Start/End: Original strand, 49250336 - 49250420
Alignment:
Q  343 tttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtggcaagtttatcttaaaatttgtatattctatattaaata 427  Q
    |||||||| |||||||||||||| | ||||||||||||||||||| |||||||||| || ||| |||| |||| || ||||||||    
T  49250336 tttttctaacatgtgcaaatttgcatatgttaagaaatttaaagtagcaagtttatattgaaacttgtgtattttacattaaata 49250420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 337 - 427
Target Start/End: Original strand, 16667379 - 16667469
Alignment:
Q  337 tatgggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtggcaagtttatcttaaaatttgtatattctatattaaata 427  Q
    ||||| ||||||||||||||||||||||| |||||||||||| |||||| ||  || |||| ||| ||| |||| |||| |||||||||||    
T  16667379 tatggatttttctatcatgtgcaaatttgcacatgttaagaagtttaaaatgataattttaacttgaaacttgtgtattttatattaaata 16667469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 337 - 387
Target Start/End: Original strand, 35999942 - 35999992
Alignment:
Q  337 tatgggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagt 387  Q
    ||||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  35999942 tatgggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagt 35999992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 334 - 470
Target Start/End: Complemental strand, 2097057 - 2096920
Alignment:
Q  334 ttttatgggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtggcaagtttatcttaaaatttgtatattctatattaaatagataac 433  Q
    ||||||| |||||| |||| |||| ||||||| |||||||||||| || ||| ||| |||||| | ||  || ||||  ||| ||||||||||| |||||    
T  2097057 ttttatgtgtttttttatcctgtgaaaatttgcacatgttaagaagttcaaaatggtaagtttgtattggaacttgtgcattttatattaaatatataac 2096958  T
Q  434 attttaat-aataattggtgttttccaatacaaagttg 470  Q
     ||||||| |||||||| |||||| ||||| |||||||    
T  2096957 tttttaataaataattgttgtttttcaataaaaagttg 2096920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 340 - 389
Target Start/End: Complemental strand, 27362571 - 27362522
Alignment:
Q  340 gggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtgg 389  Q
    |||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  27362571 gggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtgg 27362522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 340 - 389
Target Start/End: Original strand, 54495635 - 54495684
Alignment:
Q  340 gggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtgg 389  Q
    |||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  54495635 gggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtgg 54495684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 337 - 389
Target Start/End: Original strand, 47326887 - 47326939
Alignment:
Q  337 tatgggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtgg 389  Q
    |||| |||||||||||||||||||||||| |||||||||||| ||||||||||    
T  47326887 tatgagtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtgg 47326939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 337 - 389
Target Start/End: Original strand, 47341683 - 47341735
Alignment:
Q  337 tatgggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtgg 389  Q
    |||| |||||||||||||||||||||||| |||||||||||| ||||||||||    
T  47341683 tatgagtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtgg 47341735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 343 - 461
Target Start/End: Original strand, 51070399 - 51070516
Alignment:
Q  343 tttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtggcaagtttatcttaaaatttgtatattctatattaaatagataacattttaat- 441  Q
    ||||||||||||||| ||||||| ||  ||||||||||||||| ||| |||||| | ||  || |||| |||| ||||||||||| ||||| |||||||     
T  51070399 tttttctatcatgtgaaaatttgcac--gttaagaaatttaaaatggtaagtttgttttgtaacttgtgtattttatattaaatatataactttttaata 51070496  T
Q  442 aataattggtgttttccaat 461  Q
    ||| ||||||||||| ||||    
T  51070497 aatgattggtgtttttcaat 51070516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 340 - 427
Target Start/End: Complemental strand, 7349868 - 7349781
Alignment:
Q  340 gggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtggcaagtttatcttaaaatttgtatattctatattaaata 427  Q
    |||||||||||||||||| ||||||||||||| |||||| |||||||| | || |||  ||||||| |||| | || |||||||||||    
T  7349868 gggtttttctatcatgtgtaaatttgtacatgataagaagtttaaagtagtaactttgacttaaaacttgtgttttttatattaaata 7349781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 338 - 385
Target Start/End: Original strand, 9759138 - 9759185
Alignment:
Q  338 atgggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    ||||||||||||||||||| |||||||| |||||||||||||||||||    
T  9759138 atgggtttttctatcatgtacaaatttgcacatgttaagaaatttaaa 9759185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 330 - 385
Target Start/End: Original strand, 18882255 - 18882310
Alignment:
Q  330 tttcttttatgggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    |||| |||| |||||||||||||||||||||||||| |||||||||||| ||||||    
T  18882255 tttcgtttaagggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 18882310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 340 - 474
Target Start/End: Complemental strand, 19468374 - 19468239
Alignment:
Q  340 gggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtggcaagtttatcttaaaatttgtatattctatattaaatagataacatttta 439  Q
    |||||||||||| ||||||||||||| |||||||||||| |||||| | | || ||| | || ||| ||||| |||  |||||||||| | ||| ||| |    
T  19468374 gggtttttctattatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtattgaaacttgtacatttaatattaaatataaaacttttga 19468275  T
Q  440 at-aataattggtgttttccaatacaaagttgctac 474  Q
    || |||||||| |||||||||| | |||||| ||||    
T  19468274 ataaataattgttgttttccaagaaaaagttactac 19468239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 340 - 387
Target Start/End: Original strand, 23051380 - 23051427
Alignment:
Q  340 gggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagt 387  Q
    |||||||||||||||||||||||||| ||||| |||||||||||||||    
T  23051380 gggtttttctatcatgtgcaaatttgcacatgataagaaatttaaagt 23051427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 342 - 449
Target Start/End: Complemental strand, 53961500 - 53961393
Alignment:
Q  342 gtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtggcaagtttatcttaaaatttgtatattctatattaaatagataacattttaat 441  Q
    ||||||||||| |||||||||||| |||||||||||| |||||| | | || |||  ||| |||||||| | || |||||||||||  |||||||| ||     
T  53961500 gtttttctatcgtgtgcaaatttgcacatgttaagaagtttaaattagtaattttgacttgaaatttgtgttttttatattaaatatgtaacatttaaac 53961401  T
Q  442 aataattg 449  Q
    ||||||||    
T  53961400 aataattg 53961393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 340 - 389
Target Start/End: Original strand, 8736809 - 8736858
Alignment:
Q  340 gggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtgg 389  Q
    ||||||||||||| |||| ||||||| |||||||||||||||||||||||    
T  8736809 gggtttttctatcgtgtgtaaatttgcacatgttaagaaatttaaagtgg 8736858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 338 - 474
Target Start/End: Original strand, 19450896 - 19451033
Alignment:
Q  338 atgggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtggcaagtttatcttaaaatttgtatattctatattaaatagataacattt 437  Q
    |||||||||||||| ||||||||||||| |||||||||||| |||||| | | || ||| | ||  || ||||| |||  |||||||||| | ||| |||    
T  19450896 atgggtttttctattatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaacttgtacatttaatattaaatataaaactttt 19450995  T
Q  438 taat-aataattggtgttttccaatacaaagttgctac 474  Q
     ||| |||||||| |||||||||| | |||||| ||||    
T  19450996 gaataaataattgttgttttccaagaaaaagttactac 19451033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 340 - 385
Target Start/End: Complemental strand, 39877010 - 39876965
Alignment:
Q  340 gggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    |||||||||||||||||| ||||||| |||||||||||||||||||    
T  39877010 gggtttttctatcatgtgtaaatttgcacatgttaagaaatttaaa 39876965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 340 - 385
Target Start/End: Complemental strand, 40049738 - 40049693
Alignment:
Q  340 gggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    |||||||||||| ||||||||||||| |||||||||||||||||||    
T  40049738 gggtttttctattatgtgcaaatttgcacatgttaagaaatttaaa 40049693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 340 - 385
Target Start/End: Complemental strand, 50352482 - 50352437
Alignment:
Q  340 gggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||    
T  50352482 gggtttttctatcatatgcaaatttgcacatgttaagaaatttaaa 50352437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 337 - 382
Target Start/End: Complemental strand, 51691524 - 51691479
Alignment:
Q  337 tatgggtttttctatcatgtgcaaatttgtacatgttaagaaattt 382  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||||    
T  51691524 tatgggtttttctatcatgtgtaaatttgcacatgttaagaaattt 51691479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 337 - 385
Target Start/End: Complemental strand, 17410007 - 17409959
Alignment:
Q  337 tatgggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    ||||||||||||||||||||||||||||| ||||| |||||| ||||||    
T  17410007 tatgggtttttctatcatgtgcaaatttgcacatgataagaagtttaaa 17409959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 341 - 385
Target Start/End: Original strand, 29190815 - 29190859
Alignment:
Q  341 ggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    ||||||||||||||||||||||||| |||||||||||| ||||||    
T  29190815 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 29190859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 344 - 384
Target Start/End: Original strand, 42479894 - 42479934
Alignment:
Q  344 ttttctatcatgtgcaaatttgtacatgttaagaaatttaa 384  Q
    |||||||||||||||||||||| ||||||||||||||||||    
T  42479894 ttttctatcatgtgcaaatttgcacatgttaagaaatttaa 42479934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 329 - 385
Target Start/End: Complemental strand, 49228845 - 49228789
Alignment:
Q  329 atttcttttatgggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    |||| ||| |||||||||||||||||||||||||||| || ||||||||| ||||||    
T  49228845 atttttttaatgggtttttctatcatgtgcaaatttgcacgtgttaagaagtttaaa 49228789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 340 - 474
Target Start/End: Complemental strand, 27019440 - 27019305
Alignment:
Q  340 gggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtggcaagtttatcttaaaatttgtatattctatattaaatagataacatttta 439  Q
    |||||||||||||||||||||||||| | ||||||| || |||||| | | || ||| | || ||| ||||| |||  |||||||||| | ||| ||| |    
T  27019440 gggtttttctatcatgtgcaaatttgcatatgttaaaaagtttaaaatagaaattttgtattgaaacttgtacatttaatattaaatataaaacttttga 27019341  T
Q  440 at-aataattggtgttttccaatacaaagttgctac 474  Q
    || |||||||| |||||||||| | |||||| ||||    
T  27019340 ataaataattgttgttttccaagaaaaagttactac 27019305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 337 - 383
Target Start/End: Original strand, 4779431 - 4779477
Alignment:
Q  337 tatgggtttttctatcatgtgcaaatttgtacatgttaagaaattta 383  Q
    |||| |||||||||||||||||||||||| |||||||||||| ||||    
T  4779431 tatgagtttttctatcatgtgcaaatttgcacatgttaagaagttta 4779477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 340 - 385
Target Start/End: Complemental strand, 3085850 - 3085805
Alignment:
Q  340 gggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    |||||||||||||||||||||||||| |||| ||||||| ||||||    
T  3085850 gggtttttctatcatgtgcaaatttgcacattttaagaagtttaaa 3085805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 338 - 427
Target Start/End: Complemental strand, 4329776 - 4329687
Alignment:
Q  338 atgggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtggcaagtttatcttaaaatttgtatattctatattaaata 427  Q
    |||||||||||||||||||||||||||| | ||||||| || |||||||| | || |||  ||| |||||| | | || |||||||||||    
T  4329776 atgggtttttctatcatgtgcaaatttgcatatgttaaaaagtttaaagtagtaactttgacttgaaatttatgttttttatattaaata 4329687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 338 - 474
Target Start/End: Original strand, 33632199 - 33632335
Alignment:
Q  338 atgggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtggcaagtttatcttaaaatttgtatattctatattaaatagataacattt 437  Q
    ||||||||||||||||||||| |||||| ||||||||| || |||||| | | || ||||| || ||| ||||| |||  |||||||||| | ||| |||    
T  33632199 atgggtttttctatcatgtgcgaatttgcacatgttaaaaagtttaaaatag-aaatttatattgaaacttgtacatttaatattaaatataaaactttt 33632297  T
Q  438 taat-aataattggtgttttccaatacaaagttgctac 474  Q
     ||| |||||||| |||||| ||| | |||||| ||||    
T  33632298 gaataaataattgttgtttttcaaaaaaaagttactac 33632335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 336 - 385
Target Start/End: Complemental strand, 34941462 - 34941413
Alignment:
Q  336 ttatgggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    ||||||||||||||||||||||| |||||| ||||| |||||| ||||||    
T  34941462 ttatgggtttttctatcatgtgcgaatttgcacatgataagaagtttaaa 34941413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 342 - 427
Target Start/End: Complemental strand, 36971452 - 36971367
Alignment:
Q  342 gtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtggcaagtttatcttaaaatttgtatattctatattaaata 427  Q
    |||||||||||| ||||||||||   |||||||||||||||||| | | || |||||||| ||| ||||  ||| |||||||||||    
T  36971452 gtttttctatcaagtgcaaatttacgcatgttaagaaatttaaaatagtaactttatcttgaaacttgttcattttatattaaata 36971367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 334 - 427
Target Start/End: Original strand, 41415549 - 41415642
Alignment:
Q  334 ttttatgggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtggcaagtttatcttaaaatttgtatattctatattaaata 427  Q
    ||||| |||||||| ||||||||||||||||| ||||| ||| || |||||||| | || |||  ||| |||||||| | || |||||||||||    
T  41415549 ttttaagggtttttatatcatgtgcaaatttgcacatgataataagtttaaagtagtaactttgacttgaaatttgtgttttttatattaaata 41415642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 340 - 385
Target Start/End: Original strand, 44916641 - 44916686
Alignment:
Q  340 gggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    |||||||||||||||||||||||||| |||| |||| |||||||||    
T  44916641 gggtttttctatcatgtgcaaatttgcacatattaaaaaatttaaa 44916686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 345 - 385
Target Start/End: Complemental strand, 24685012 - 24684972
Alignment:
Q  345 tttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    ||||||||||||||||||||| |||||||||||| ||||||    
T  24685012 tttctatcatgtgcaaatttgcacatgttaagaagtttaaa 24684972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 343 - 378
Target Start/End: Original strand, 9971661 - 9971696
Alignment:
Q  343 tttttctatcatgtgcaaatttgtacatgttaagaa 378  Q
    |||||||||||||||||||||| |||||||||||||    
T  9971661 tttttctatcatgtgcaaatttatacatgttaagaa 9971696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 342 - 385
Target Start/End: Complemental strand, 23545654 - 23545611
Alignment:
Q  342 gtttttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    |||||||||||||||||||||||| ||||||||| || ||||||    
T  23545654 gtttttctatcatgtgcaaatttgcacatgttaataagtttaaa 23545611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 342 - 385
Target Start/End: Complemental strand, 40682609 - 40682567
Alignment:
Q  342 gtttttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    ||||||||||||||||||| |||| |||||||||||||||||||    
T  40682609 gtttttctatcatgtgcaa-tttgcacatgttaagaaatttaaa 40682567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 339 - 378
Target Start/End: Complemental strand, 49181253 - 49181214
Alignment:
Q  339 tgggtttttctatcatgtgcaaatttgtacatgttaagaa 378  Q
    ||||||||||||||||||||||||||| || |||||||||    
T  49181253 tgggtttttctatcatgtgcaaatttgcacctgttaagaa 49181214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 341 - 387
Target Start/End: Complemental strand, 25843473 - 25843427
Alignment:
Q  341 ggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagt 387  Q
    ||||||||||||| ||||||||||||| ||||||| || ||||||||    
T  25843473 ggtttttctatcacgtgcaaatttgtagatgttaaaaagtttaaagt 25843427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 343 - 385
Target Start/End: Complemental strand, 52391475 - 52391433
Alignment:
Q  343 tttttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    ||||||||||||||| ||||||| |||||||||||| ||||||    
T  52391475 tttttctatcatgtgtaaatttgcacatgttaagaagtttaaa 52391433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 341 - 378
Target Start/End: Original strand, 13214415 - 13214452
Alignment:
Q  341 ggtttttctatcatgtgcaaatttgtacatgttaagaa 378  Q
    ||||||||||| ||||||||||||| ||||||||||||    
T  13214415 ggtttttctattatgtgcaaatttgcacatgttaagaa 13214452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 385
Target Start/End: Complemental strand, 23438335 - 23438290
Alignment:
Q  340 gggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    |||||||||||| ||||||||||||| ||||||| |||| ||||||    
T  23438335 gggtttttctattatgtgcaaatttgcacatgttgagaattttaaa 23438290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 385
Target Start/End: Original strand, 53376406 - 53376451
Alignment:
Q  340 gggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    |||||||| ||||||||| ||||||| |||||||||||| ||||||    
T  53376406 gggtttttttatcatgtgaaaatttgcacatgttaagaagtttaaa 53376451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 343 - 427
Target Start/End: Original strand, 41887570 - 41887654
Alignment:
Q  343 tttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtggcaagtttatcttaaaatttgtatattctatattaaata 427  Q
    |||||||| |||||||||||||| |||||||||| |   |||||| | |||||||| || ||| |||| |||| || ||||||||    
T  41887570 tttttctaacatgtgcaaatttgcacatgttaaggatactaaagtagtaagtttatattgaaacttgtgtattttacattaaata 41887654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 336 - 376
Target Start/End: Complemental strand, 41887752 - 41887712
Alignment:
Q  336 ttatgggtttttctatcatgtgcaaatttgtacatgttaag 376  Q
    |||||| |||||||| |||||||||||||| ||||||||||    
T  41887752 ttatggatttttctaacatgtgcaaatttgcacatgttaag 41887712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 337 - 385
Target Start/End: Complemental strand, 46803982 - 46803934
Alignment:
Q  337 tatgggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    |||| |||||||||||||||||||||||| |||| |||| || ||||||    
T  46803982 tatgagtttttctatcatgtgcaaatttgcacatattaaaaagtttaaa 46803934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 343 - 387
Target Start/End: Original strand, 48910803 - 48910847
Alignment:
Q  343 tttttctatcatgtgcaaatttgtacatgttaagaaatttaaagt 387  Q
    |||||||||||| |||||||||| | |||||||||| ||||||||    
T  48910803 tttttctatcatatgcaaatttgcatatgttaagaagtttaaagt 48910847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 73; Significance: 4e-33; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 343 - 479
Target Start/End: Original strand, 31790917 - 31791053
Alignment:
Q  343 tttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtggcaagtttatcttaaaatttgtatattctatattaaatagataacattttaata 442  Q
    |||||||||||| |||||||||| |||| |||||||||||||| |||||||||| |||| ||| || | |||||||||||||||||  ||| ||||||||    
T  31790917 tttttctatcatatgcaaatttgcacatattaagaaatttaaaatggcaagtttgtcttgaaacttatgtattctatattaaataggaaacgttttaata 31791016  T
Q  443 ataattggtgttttccaatacaaagttgctacattta 479  Q
    |||||| ||||||| ||||| |||||| |||||||||    
T  31791017 ataattagtgtttttcaataaaaagttactacattta 31791053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 338 - 387
Target Start/End: Complemental strand, 3853125 - 3853076
Alignment:
Q  338 atgggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagt 387  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  3853125 atgggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaagt 3853076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 338 - 385
Target Start/End: Original strand, 14228122 - 14228169
Alignment:
Q  338 atgggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||    
T  14228122 atgggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaa 14228169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 336 - 387
Target Start/End: Complemental strand, 17596525 - 17596474
Alignment:
Q  336 ttatgggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagt 387  Q
    |||||||||||||||||||||||||||||||||||| |||||| ||||||||    
T  17596525 ttatgggtttttctatcatgtgcaaatttgtacatgataagaagtttaaagt 17596474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 340 - 385
Target Start/End: Original strand, 17552585 - 17552630
Alignment:
Q  340 gggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    |||||||||||||||||||||||||| |||||||||||||||||||    
T  17552585 gggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaa 17552630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 340 - 385
Target Start/End: Original strand, 28943767 - 28943812
Alignment:
Q  340 gggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    |||||||||||||||||||||||||| |||||||||||||||||||    
T  28943767 gggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaa 28943812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 338 - 427
Target Start/End: Complemental strand, 31503924 - 31503835
Alignment:
Q  338 atgggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtggcaagtttatcttaaaatttgtatattctatattaaata 427  Q
    |||| ||||||||  ||||||||||||| ||||||||||||||||||||| | |||||||| ||  || |||| |||| |||||||||||    
T  31503924 atggatttttctaatatgtgcaaatttgcacatgttaagaaatttaaagtagtaagtttatattggaacttgtgtattttatattaaata 31503835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 337 - 385
Target Start/End: Complemental strand, 34692537 - 34692489
Alignment:
Q  337 tatgggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    ||||||||||||||||||||||||||||| |||||||||||| ||||||    
T  34692537 tatgggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 34692489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 342 - 389
Target Start/End: Complemental strand, 10887207 - 10887160
Alignment:
Q  342 gtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtgg 389  Q
    |||||||||||||||||||||||| |||||||||||| ||||||||||    
T  10887207 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtgg 10887160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 335 - 385
Target Start/End: Original strand, 2830674 - 2830724
Alignment:
Q  335 tttatgggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    |||||||||||||||||||||| |||||||| |||||||||||| ||||||    
T  2830674 tttatgggtttttctatcatgtacaaatttgcacatgttaagaagtttaaa 2830724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 338 - 388
Target Start/End: Original strand, 18332684 - 18332734
Alignment:
Q  338 atgggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtg 388  Q
    |||||||||||||||||||||||||||  |||||||||||| |||||||||    
T  18332684 atgggtttttctatcatgtgcaaattttcacatgttaagaagtttaaagtg 18332734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 338 - 387
Target Start/End: Original strand, 31169759 - 31169808
Alignment:
Q  338 atgggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagt 387  Q
    |||||||||||||||||||| ||||||| ||||||||| |||||||||||    
T  31169759 atgggtttttctatcatgtgtaaatttgcacatgttaacaaatttaaagt 31169808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 340 - 479
Target Start/End: Complemental strand, 12454245 - 12454106
Alignment:
Q  340 gggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtggcaagtttatcttaaaatttgtatattctatattaaatagataacatttt- 438  Q
    ||||||||||||||| || ||||||| |||| |||| ||||||||| ||| || ||  | ||  || |||| |||||||||||||||||| ||| ||||     
T  12454245 gggtttttctatcatatgtaaatttgcacattttaaaaaatttaaaatggtaaattggttttggaacttgtgtattctatattaaatagacaacttttta 12454146  T
Q  439 aataataattggtgttttccaatacaaagttgctacattta 479  Q
    |||| |||||| |||||| ||||| ||| || |||||||||    
T  12454145 aatagtaattgatgtttt-caataaaaaattactacattta 12454106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 341 - 385
Target Start/End: Original strand, 29863301 - 29863345
Alignment:
Q  341 ggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    ||||||||||||||||||||||||| |||||||||||| ||||||    
T  29863301 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 29863345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 335 - 387
Target Start/End: Complemental strand, 31568294 - 31568242
Alignment:
Q  335 tttatgggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagt 387  Q
    ||||| ||||||||||||||||||||||||| ||||||||| || ||||||||    
T  31568294 tttataggtttttctatcatgtgcaaatttgcacatgttaaaaagtttaaagt 31568242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 340 - 383
Target Start/End: Complemental strand, 8467833 - 8467790
Alignment:
Q  340 gggtttttctatcatgtgcaaatttgtacatgttaagaaattta 383  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||    
T  8467833 gggtttttctatcatatgcaaatttgtacatgttaagaagttta 8467790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 373 - 440
Target Start/End: Complemental strand, 16540751 - 16540684
Alignment:
Q  373 taagaaatttaaagtggcaagtttatcttaaaatttgtatattctatattaaatagataacattttaa 440  Q
    |||||| |||||| | | |||||||| |||||||||||||||| ||||||||||| |||| |||||||    
T  16540751 taagaagtttaaaatcgtaagtttatattaaaatttgtatattttatattaaatatataatattttaa 16540684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 343 - 389
Target Start/End: Complemental strand, 6017033 - 6016987
Alignment:
Q  343 tttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtgg 389  Q
    ||||||||||||||||||||||| ||||||||| || ||||||||||    
T  6017033 tttttctatcatgtgcaaatttgcacatgttaaaaagtttaaagtgg 6016987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 341 - 387
Target Start/End: Original strand, 32614943 - 32614989
Alignment:
Q  341 ggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagt 387  Q
    |||||||||||||||| |||||||| |||||||||||| ||||||||    
T  32614943 ggtttttctatcatgtacaaatttgcacatgttaagaagtttaaagt 32614989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 340 - 385
Target Start/End: Complemental strand, 13391855 - 13391810
Alignment:
Q  340 gggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    ||||||||||||||||||||||||||  ||||||||||| ||||||    
T  13391855 gggtttttctatcatgtgcaaatttgcgcatgttaagaagtttaaa 13391810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 340 - 385
Target Start/End: Complemental strand, 33017904 - 33017859
Alignment:
Q  340 gggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    |||||||||||| ||||||||||||| ||||||||| |||||||||    
T  33017904 gggtttttctattatgtgcaaatttgcacatgttaaaaaatttaaa 33017859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 346 - 385
Target Start/End: Complemental strand, 20979146 - 20979107
Alignment:
Q  346 ttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    |||||||||||||||||||| |||||||||||| ||||||    
T  20979146 ttctatcatgtgcaaatttgcacatgttaagaagtttaaa 20979107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 342 - 377
Target Start/End: Original strand, 24979149 - 24979184
Alignment:
Q  342 gtttttctatcatgtgcaaatttgtacatgttaaga 377  Q
    |||||||||||||||||||||||| |||||||||||    
T  24979149 gtttttctatcatgtgcaaatttgcacatgttaaga 24979184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 342 - 385
Target Start/End: Original strand, 27819627 - 27819670
Alignment:
Q  342 gtttttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    ||||||||||||||| |||||||| |||||||||||| ||||||    
T  27819627 gtttttctatcatgtacaaatttgcacatgttaagaagtttaaa 27819670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 376
Target Start/End: Complemental strand, 28470036 - 28470001
Alignment:
Q  341 ggtttttctatcatgtgcaaatttgtacatgttaag 376  Q
    ||||||||||||||||||||||||| ||||||||||    
T  28470036 ggtttttctatcatgtgcaaatttgcacatgttaag 28470001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 338 - 385
Target Start/End: Original strand, 31069578 - 31069625
Alignment:
Q  338 atgggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    |||| ||||||||||||||||||||||  |||||||||||| ||||||    
T  31069578 atggatttttctatcatgtgcaaatttacacatgttaagaagtttaaa 31069625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 385
Target Start/End: Complemental strand, 3261258 - 3261213
Alignment:
Q  340 gggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    |||||||||||||||||||||||||  ||||||||| || ||||||    
T  3261258 gggtttttctatcatgtgcaaatttacacatgttaaaaagtttaaa 3261213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 432
Target Start/End: Complemental strand, 16540898 - 16540809
Alignment:
Q  343 tttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtggcaagtttatcttaaaatttgtatattctatattaaatagataa 432  Q
    ||||| |||||| || ||||||| |||| |||| || ||||||   | |||||| | |||||||||||||||| ||||||||||| ||||    
T  16540898 tttttttatcatttgtaaatttgcacatattaaaaagtttaaatatgtaagtttgtattaaaatttgtatattttatattaaataaataa 16540809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 342 - 379
Target Start/End: Complemental strand, 22284785 - 22284748
Alignment:
Q  342 gtttttctatcatgtgcaaatttgtacatgttaagaaa 379  Q
    |||||||||||||||||||||||| |||||| ||||||    
T  22284785 gtttttctatcatgtgcaaatttgcacatgtcaagaaa 22284748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 341 - 385
Target Start/End: Original strand, 29065424 - 29065468
Alignment:
Q  341 ggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    ||||||||||||||||||||| ||| ||||||||| || ||||||    
T  29065424 ggtttttctatcatgtgcaaacttgcacatgttaaaaagtttaaa 29065468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 341 - 385
Target Start/End: Original strand, 29120277 - 29120321
Alignment:
Q  341 ggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    ||||||||||||||||||||| ||| ||||||||| || ||||||    
T  29120277 ggtttttctatcatgtgcaaacttgcacatgttaaaaagtttaaa 29120321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 342 - 378
Target Start/End: Original strand, 30591163 - 30591199
Alignment:
Q  342 gtttttctatcatgtgcaaatttgtacatgttaagaa 378  Q
    |||||||||||||||||||||||  ||||||||||||    
T  30591163 gtttttctatcatgtgcaaatttacacatgttaagaa 30591199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 65; Significance: 2e-28; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 340 - 479
Target Start/End: Complemental strand, 36731360 - 36731220
Alignment:
Q  340 gggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtggcaagtttatcttaaaatttgtatattctatattaaatagataa-catttt 438  Q
    |||||||||||||||||| ||||||  ||||||||||||||||||| ||| || ||| ||||| || |||| |||||||||||||||||||||   ||||    
T  36731360 gggtttttctatcatgtgtaaatttacacatgttaagaaatttaaaatggtaaatttgtcttagaacttgtgtattctatattaaatagataattttttt 36731261  T
Q  439 aataataattggtgttttccaatacaaagttgctacattta 479  Q
    |||||||||| ||||||| ||||  |||||| |||||||||    
T  36731260 aataataattagtgtttttcaatgaaaagttactacattta 36731220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 340 - 462
Target Start/End: Complemental strand, 9450437 - 9450314
Alignment:
Q  340 gggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtggcaagtttatcttaaaatttgtatattctatattaaatagataacatttta 439  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||| | | |||| | ||  ||||||| |||| | ||||||||| ||||  |||||    
T  9450437 gggtttttctatcatgtgcaaatctgcacatgttaagaaatttaaagtagtatgtttgtattggaatttgtgtattttctattaaatatataatttttta 9450338  T
Q  440 at-aataattggtgttttccaata 462  Q
    || |||||||| |||||| |||||    
T  9450337 ataaataattgttgtttttcaata 9450314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 334 - 427
Target Start/End: Original strand, 16126551 - 16126644
Alignment:
Q  334 ttttatgggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtggcaagtttatcttaaaatttgtatattctatattaaata 427  Q
    ||||| |||||||||||||||||||||||||| |||||||||||| |||||||| | || |||| ||| ||| |||| | || |||||||||||    
T  16126551 ttttaagggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttgaaacttgtgttttttatattaaata 16126644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 342 - 473
Target Start/End: Original strand, 20566017 - 20566149
Alignment:
Q  342 gtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtggcaagtttatcttaaaatttgtatattctatattaaatagataacattttaat 441  Q
    |||||||||||||||||||||||  |||||||||||| ||||||||   | |||| | ||  || |||| |||| | |||||||||||||| ||||||||    
T  20566017 gtttttctatcatgtgcaaatttacacatgttaagaagtttaaagtattatgtttgtattggaacttgtgtattttttattaaatagataatattttaat 20566116  T
Q  442 -aataattggtgttttccaatacaaagttgcta 473  Q
     |||||||| |||||| ||||| | ||||||||    
T  20566117 aaataattgttgtttttcaataaatagttgcta 20566149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 336 - 443
Target Start/End: Complemental strand, 15232015 - 15231908
Alignment:
Q  336 ttatgggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtggcaagtttatcttaaaatttgtatattctatattaaatagataacat 435  Q
    ||||| |||||||||| ||||||||||||| |||||||||||| |||||||||| || |||  ||||||| ||||  |||  ||||||||||  |||| |    
T  15232015 ttatgagtttttctattatgtgcaaatttgcacatgttaagaagtttaaagtggtaactttgacttaaaacttgtgcatttcatattaaatatgtaactt 15231916  T
Q  436 tttaataa 443  Q
    ||||||||    
T  15231915 tttaataa 15231908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 340 - 443
Target Start/End: Original strand, 24729575 - 24729678
Alignment:
Q  340 gggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtggcaagtttatcttaaaatttgtatattctatattaaatagataacatttta 439  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| | | || |||   ||  |||||||||||| | |||||| || ||||| |||||    
T  24729575 gggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaatttgtatattttgtattaattacataacttttta 24729674  T
Q  440 ataa 443  Q
    ||||    
T  24729675 ataa 24729678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 340 - 385
Target Start/End: Original strand, 38248418 - 38248463
Alignment:
Q  340 gggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    |||||||||||||||||||||||||| |||||||||||||||||||    
T  38248418 gggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaa 38248463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 334 - 385
Target Start/End: Original strand, 5583550 - 5583601
Alignment:
Q  334 ttttatgggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    ||||| |||||||||||||||| ||||||||| |||||||||||||||||||    
T  5583550 ttttaagggtttttctatcatgcgcaaatttgcacatgttaagaaatttaaa 5583601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 344 - 479
Target Start/End: Complemental strand, 14377600 - 14377465
Alignment:
Q  344 ttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtggcaagtttatcttaaaatttgtatattctatattaaatagataacattttaataa 443  Q
    |||||||||||||||||||||||||||| |||||| |||||||| | || |||  ||| ||| |||| | || |||||||||||  |||| ||| |  ||    
T  14377600 ttttctatcatgtgcaaatttgtacatgataagaagtttaaagtagtaactttgacttgaaacttgtgttttttatattaaatatgtaacttttaacaaa 14377501  T
Q  444 taattggtgttttccaatacaaagttgctacattta 479  Q
    |||||| || ||| ||||| |||||| |||| ||||    
T  14377500 taattgttggttttcaataaaaagttactactttta 14377465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 344 - 427
Target Start/End: Original strand, 36909419 - 36909502
Alignment:
Q  344 ttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtggcaagtttatcttaaaatttgtatattctatattaaata 427  Q
    |||||||||||||| ||||||| |||||||||  |||||||  || ||| ||||||||||||||| | |||| |||||||||||    
T  36909419 ttttctatcatgtgtaaatttgcacatgttaaacaatttaatatgacaaatttatcttaaaatttatgtattttatattaaata 36909502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 340 - 386
Target Start/End: Complemental strand, 6109569 - 6109523
Alignment:
Q  340 gggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaag 386  Q
    |||||||||||||||||||||||||| |||||||||||| |||||||    
T  6109569 gggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaag 6109523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 340 - 382
Target Start/End: Original strand, 29157827 - 29157869
Alignment:
Q  340 gggtttttctatcatgtgcaaatttgtacatgttaagaaattt 382  Q
    |||||||||||||||||||||||||| ||||||||||||||||    
T  29157827 gggtttttctatcatgtgcaaatttgcacatgttaagaaattt 29157869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 340 - 385
Target Start/End: Original strand, 7757784 - 7757829
Alignment:
Q  340 gggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    |||||||||||||||||||||||||  |||||||||||||||||||    
T  7757784 gggtttttctatcatgtgcaaatttacacatgttaagaaatttaaa 7757829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 340 - 385
Target Start/End: Complemental strand, 8065303 - 8065258
Alignment:
Q  340 gggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    |||||||||||||||||||||||||| |||||||||||| ||||||    
T  8065303 gggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 8065258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 335 - 479
Target Start/End: Complemental strand, 12016851 - 12016707
Alignment:
Q  335 tttatgggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtggcaagtttatcttaaaatttgtatattctatattaaatagataaca 434  Q
    |||| |||||||||||||||||||||||||| |||| ||||||| |||||||| | || |||| |||  || |||| | || |||||||||||  || |     
T  12016851 tttaagggtttttctatcatgtgcaaatttgcacatattaagaagtttaaagtagtaattttaacttggaacttgtgttttttatattaaatatgtagc- 12016753  T
Q  435 ttttaat-aataattggtgttttccaatacaaagttgctacattta 479  Q
    ||||||| |||||||| || ||| ||||| |||||| |||| ||||    
T  12016752 ttttaatcaataattgttggttttcaataaaaagttactactttta 12016707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 334 - 427
Target Start/End: Original strand, 12919342 - 12919435
Alignment:
Q  334 ttttatgggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtggcaagtttatcttaaaatttgtatattctatattaaata 427  Q
    |||||||| ||||| ||||||||||||||||  ||||||||| ||||||||| | | || |||||||| ||| ||||  ||| |||||||||||    
T  12919342 ttttatggatttttttatcatgtgcaaatttacacatgttaaaaaatttaaaatagtaactttatcttgaaacttgttcattttatattaaata 12919435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 344 - 427
Target Start/End: Original strand, 2060044 - 2060127
Alignment:
Q  344 ttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtggcaagtttatcttaaaatttgtatattctatattaaata 427  Q
    |||||||| ||||||||||||  ||||||||||||||||||||| | || |||| |||  ||||||| | || |||||||||||    
T  2060044 ttttctatgatgtgcaaatttacacatgttaagaaatttaaagtagtaactttaacttggaatttgtgtcttttatattaaata 2060127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 344 - 387
Target Start/End: Complemental strand, 19228601 - 19228558
Alignment:
Q  344 ttttctatcatgtgcaaatttgtacatgttaagaaatttaaagt 387  Q
    |||||||||||||||||||||| |||||||||||| ||||||||    
T  19228601 ttttctatcatgtgcaaatttgcacatgttaagaagtttaaagt 19228558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 344 - 427
Target Start/End: Original strand, 26003348 - 26003431
Alignment:
Q  344 ttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtggcaagtttatcttaaaatttgtatattctatattaaata 427  Q
    |||||||||||||||||||||| |||||||||||| |||||| | | || ||| | || ||||||||| |||  ||||||||||    
T  26003348 ttttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtattgaaatttgtacatttgatattaaata 26003431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 340 - 387
Target Start/End: Original strand, 27665042 - 27665089
Alignment:
Q  340 gggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagt 387  Q
    |||||||||||||||||||||||||| ||||| |||||| ||||||||    
T  27665042 gggtttttctatcatgtgcaaatttgcacatgataagaagtttaaagt 27665089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 340 - 443
Target Start/End: Complemental strand, 35729297 - 35729194
Alignment:
Q  340 gggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtggcaagtttatcttaaaatttgtatattctatattaaatagataacatttta 439  Q
    ||||||||||| ||||| |||||||| ||||||| |||| |||||||| |||| ||||| ||  || |||| |||| |||| |||||| ||||  |||||    
T  35729297 gggtttttctaacatgtacaaatttgcacatgttgagaagtttaaagtagcaaatttatattggaacttgtgtattttatagtaaatatataaattttta 35729198  T
Q  440 ataa 443  Q
    ||||    
T  35729197 ataa 35729194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 337 - 383
Target Start/End: Original strand, 5853458 - 5853504
Alignment:
Q  337 tatgggtttttctatcatgtgcaaatttgtacatgttaagaaattta 383  Q
    |||| |||||||||||||||||||||||| |||||||||||| ||||    
T  5853458 tatgagtttttctatcatgtgcaaatttgcacatgttaagaagttta 5853504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 339 - 385
Target Start/End: Complemental strand, 9747498 - 9747452
Alignment:
Q  339 tgggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    ||||||||||||||||||||||||||  |||||||||||| ||||||    
T  9747498 tgggtttttctatcatgtgcaaattttcacatgttaagaagtttaaa 9747452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 331 - 385
Target Start/End: Complemental strand, 16123467 - 16123413
Alignment:
Q  331 ttcttttatgggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    |||||||| || ||||||||||||||||||||||| ||||| |||||| ||||||    
T  16123467 ttcttttaaggatttttctatcatgtgcaaatttgcacatgataagaagtttaaa 16123413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 337 - 383
Target Start/End: Original strand, 16493527 - 16493573
Alignment:
Q  337 tatgggtttttctatcatgtgcaaatttgtacatgttaagaaattta 383  Q
    |||| |||||||||||||||||||||||| |||||||||||| ||||    
T  16493527 tatgagtttttctatcatgtgcaaatttgcacatgttaagaagttta 16493573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 343 - 385
Target Start/End: Original strand, 34213950 - 34213992
Alignment:
Q  343 tttttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    |||||||||| |||||||||||| |||||||||||||||||||    
T  34213950 tttttctatcgtgtgcaaatttgcacatgttaagaaatttaaa 34213992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 340 - 378
Target Start/End: Original strand, 43388479 - 43388517
Alignment:
Q  340 gggtttttctatcatgtgcaaatttgtacatgttaagaa 378  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  43388479 gggtttttctatcatgtgcaaatttgcacatgttaagaa 43388517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 337 - 474
Target Start/End: Complemental strand, 43806543 - 43806405
Alignment:
Q  337 tatgggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtggcaagtttatcttaaaatttgtatattctatattaaatagataacatt 436  Q
    |||||||||||||||| |||| ||||||| ||||||||| || |||||| | | || ||| | || ||| ||||| |||  |||||||||| | ||| ||    
T  43806543 tatgggtttttctatcgtgtgtaaatttgcacatgttaaaaagtttaaaatagaaattttgtattgaaacttgtacatttaatattaaatataaaacttt 43806444  T
Q  437 ttaat-aataattggtgttttccaatacaaagttgctac 474  Q
    | ||| |||||||| |||||||||| | |||||| ||||    
T  43806443 tgaataaataattgttgttttccaagaaaaagttactac 43806405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 340 - 385
Target Start/End: Original strand, 4576324 - 4576369
Alignment:
Q  340 gggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    |||||||||||||||||||||||| | | |||||||||||||||||    
T  4576324 gggtttttctatcatgtgcaaattcgcatatgttaagaaatttaaa 4576369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 340 - 385
Target Start/End: Complemental strand, 17265584 - 17265539
Alignment:
Q  340 gggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    ||||||||||||||||| |||||||| || ||||||||||||||||    
T  17265584 gggtttttctatcatgtccaaatttgcacttgttaagaaatttaaa 17265539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 343 - 427
Target Start/End: Original strand, 8770887 - 8770971
Alignment:
Q  343 tttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtggcaagtttatcttaaaatttgtatattctatattaaata 427  Q
    ||||| ||||||||||||||||| |||||||||||| |||||||| | || |||  ||| |||||| | | || |||||||||||    
T  8770887 tttttttatcatgtgcaaatttgcacatgttaagaagtttaaagtagtaattttgacttgaaatttttgttttttatattaaata 8770971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 342 - 378
Target Start/End: Original strand, 11660894 - 11660930
Alignment:
Q  342 gtttttctatcatgtgcaaatttgtacatgttaagaa 378  Q
    |||||||||||||||||||||||| ||||||||||||    
T  11660894 gtttttctatcatgtgcaaatttgcacatgttaagaa 11660930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 344 - 479
Target Start/End: Original strand, 15411624 - 15411760
Alignment:
Q  344 ttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtggcaagtttatcttaaaatttgtatattctatattaaatagataacattttaat-a 442  Q
    ||||||| |||||||||||||| |||||||||||| |||||| | | || ||| |||| ||| ||||  ||| |||||||||||  || | ||||||| |    
T  15411624 ttttctaacatgtgcaaatttgcacatgttaagaagtttaaaatagtaactttgtcttgaaacttgttcattttatattaaatatgtagctttttaataa 15411723  T
Q  443 ataattggtgttttccaatacaaagttgctacattta 479  Q
    || |||| |||||| ||||| ||| || |||| ||||    
T  15411724 attattgttgtttttcaataaaaaattactactttta 15411760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 340 - 387
Target Start/End: Complemental strand, 4821456 - 4821409
Alignment:
Q  340 gggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagt 387  Q
    |||||||||||| ||||||||||||| ||||| |||||| ||||||||    
T  4821456 gggtttttctattatgtgcaaatttgcacatgataagaagtttaaagt 4821409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 337 - 383
Target Start/End: Complemental strand, 22704720 - 22704674
Alignment:
Q  337 tatgggtttttctatcatgtgcaaatttgtacatgttaagaaattta 383  Q
    |||| |||||||||||||||||||||||| |||| ||||||| ||||    
T  22704720 tatgagtttttctatcatgtgcaaatttgcacatcttaagaagttta 22704674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 343 - 427
Target Start/End: Complemental strand, 3951427 - 3951343
Alignment:
Q  343 tttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtggcaagtttatcttaaaatttgtatattctatattaaata 427  Q
    |||||||| |||||||||||||| |||||||||| |   |||||| | |||||||| || ||| |||| |||| || ||||||||    
T  3951427 tttttctaacatgtgcaaatttgcacatgttaaggatactaaagtagtaagtttatattgaaacttgtgtattttacattaaata 3951343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 343 - 427
Target Start/End: Complemental strand, 8847964 - 8847880
Alignment:
Q  343 tttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtggcaagtttatcttaaaatttgtatattctatattaaata 427  Q
    |||||||| |||||||||||||| |||||||||| |   |||||| | |||||||| || ||| |||| |||| || ||||||||    
T  8847964 tttttctaacatgtgcaaatttgcacatgttaaggatactaaagtagtaagtttatattgaaacttgtgtattttacattaaata 8847880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 340 - 384
Target Start/End: Complemental strand, 29142254 - 29142210
Alignment:
Q  340 gggtttttctatcatgtgcaaatttgtacatgttaagaaatttaa 384  Q
    |||||||||||||||||||||||||  ||||||| |||| |||||    
T  29142254 gggtttttctatcatgtgcaaatttacacatgtttagaagtttaa 29142210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 340 - 384
Target Start/End: Complemental strand, 34817925 - 34817881
Alignment:
Q  340 gggtttttctatcatgtgcaaatttgtacatgttaagaaatttaa 384  Q
    |||||||||||||||||||||| ||  |||||||||||| |||||    
T  34817925 gggtttttctatcatgtgcaaacttacacatgttaagaagtttaa 34817881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 342 - 378
Target Start/End: Complemental strand, 45062376 - 45062340
Alignment:
Q  342 gtttttctatcatgtgcaaatttgtacatgttaagaa 378  Q
    |||||||||||||||||||||||| |||| |||||||    
T  45062376 gtttttctatcatgtgcaaatttgcacatattaagaa 45062340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 60; Significance: 2e-25; HSPs: 54)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 340 - 478
Target Start/End: Complemental strand, 29642783 - 29642644
Alignment:
Q  340 gggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtggcaagtttatcttaaaatttgtatattct-atattaaatagataacatttt 438  Q
    |||||||||||||||||||||||||| | ||| |||| |||||||| ||| |||||| |||| ||| |||| | || | |||||||||||| ||| ||||    
T  29642783 gggtttttctatcatgtgcaaatttgcatatgataaggaatttaaaatggtaagtttgtcttgaaacttgtgtttttttatattaaatagacaacttttt 29642684  T
Q  439 aataataattggtgttttccaatacaaagttgctacattt 478  Q
    |||||||||||||||||| ||||  |||||| ||||||||    
T  29642683 aataataattggtgtttttcaatgaaaagttactacattt 29642644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 344 - 462
Target Start/End: Complemental strand, 20514809 - 20514690
Alignment:
Q  344 ttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtggcaagtttatcttaaaatttgtatattctatattaaatagataacattttaat-a 442  Q
    |||||||||||||||| ||||| ||| ||||||||||||||| ||| |||||| ||||  || ||||| ||| ||||||||||| ||||| ||||||| |    
T  20514809 ttttctatcatgtgcatatttgcacaggttaagaaatttaaaatggtaagtttgtcttggaacttgtacattttatattaaatatataactttttaataa 20514710  T
Q  443 ataattggtgttttccaata 462  Q
    ||||||||| |||| |||||    
T  20514709 ataattggtatttttcaata 20514690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 340 - 479
Target Start/End: Complemental strand, 12132163 - 12132023
Alignment:
Q  340 gggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtggcaagtttatcttaaaatttgtatattctatattaaatagataacatttta 439  Q
    ||||||||||||||| |||||| ||| ||||||||||||||||||||| | |||||| | ||  || ||| | ||| ||||||||||| ||||| |||||    
T  12132163 gggtttttctatcatctgcaaacttgcacatgttaagaaatttaaagtagtaagtttgtattggaacttgaacattttatattaaatatataacttttta 12132064  T
Q  440 at-aataattggtgttttccaatacaaagttgctacattta 479  Q
    || |||| |||  ||||| ||||| ||||||||||| ||||    
T  12132063 ataaatacttgtggtttttcaataaaaagttgctactttta 12132023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 340 - 479
Target Start/End: Original strand, 14816124 - 14816263
Alignment:
Q  340 gggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtggcaagtttatcttaaaatttgtatattctatattaaatagataacatttta 439  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||||| | || |||  ||||||| |||| |||| |||||||||||  |||  |||||    
T  14816124 gggtttttctatcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttaaaacttgtgtatt-tatattaaatatgtaaattttta 14816222  T
Q  440 ataa-taattggtgttttccaatacaaagttgctacattta 479  Q
    |||| |||||| || ||| ||||| |||||| |||| ||||    
T  14816223 ataattaattgttggttttcaataaaaagttactactttta 14816263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 340 - 479
Target Start/End: Complemental strand, 14829616 - 14829477
Alignment:
Q  340 gggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtggcaagtttatcttaaaatttgtatattctatattaaatagataacatttta 439  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||||| | || |||  ||||||| |||| |||| |||||||||||  |||  |||||    
T  14829616 gggtttttctatcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttaaaacttgtgtatt-tatattaaatatgtaaattttta 14829518  T
Q  440 ataa-taattggtgttttccaatacaaagttgctacattta 479  Q
    |||| |||||| || ||| ||||| |||||| |||| ||||    
T  14829517 ataattaattgttggttttcaataaaaagttactactttta 14829477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 337 - 385
Target Start/End: Complemental strand, 2161570 - 2161522
Alignment:
Q  337 tatgggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||    
T  2161570 tatgggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaa 2161522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 344 - 444
Target Start/End: Complemental strand, 7489778 - 7489678
Alignment:
Q  344 ttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtggcaagtttatcttaaaatttgtatattctatattaaatagataacattttaataa 443  Q
    ||||||||||||||||||||||| |||||| |||| |||||| |   |||||| | ||||||||| |||||| ||||||||||  ||||| |||||||||    
T  7489778 ttttctatcatgtgcaaatttgtgcatgtttagaattttaaaataataagtttgtattaaaatttatatattttatattaaatgtataactttttaataa 7489679  T
Q  444 t 444  Q
    |    
T  7489678 t 7489678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 340 - 387
Target Start/End: Complemental strand, 26682248 - 26682201
Alignment:
Q  340 gggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagt 387  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||    
T  26682248 gggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaagt 26682201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 339 - 385
Target Start/End: Complemental strand, 5573467 - 5573421
Alignment:
Q  339 tgggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||    
T  5573467 tgggtttttctatcatgtgcaaatttgtacatgttaagaagtttaaa 5573421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 340 - 385
Target Start/End: Original strand, 3306053 - 3306098
Alignment:
Q  340 gggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    |||||||||||||||||||||||||| |||||||||||||||||||    
T  3306053 gggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaa 3306098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 340 - 385
Target Start/End: Complemental strand, 6818197 - 6818152
Alignment:
Q  340 gggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||    
T  6818197 gggtttttctatcatgtgcaaatttgtacatgttaagaagtttaaa 6818152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 340 - 385
Target Start/End: Original strand, 8284566 - 8284611
Alignment:
Q  340 gggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||    
T  8284566 gggtttttctatcatgtgcaaatttgtacatgttaagaagtttaaa 8284611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 340 - 427
Target Start/End: Complemental strand, 10129283 - 10129196
Alignment:
Q  340 gggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtggcaagtttatcttaaaatttgtatattctatattaaata 427  Q
    |||||||||||||||||||||||||| |||||||||||| |||||||| | || |||| |||  || |||| | || |||||||||||    
T  10129283 gggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtagtaattttaacttggaacttgtgttttttatattaaata 10129196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 337 - 387
Target Start/End: Original strand, 39024852 - 39024902
Alignment:
Q  337 tatgggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagt 387  Q
    ||||||||||||||||||||||||||||| ||||| |||||| ||||||||    
T  39024852 tatgggtttttctatcatgtgcaaatttgcacatgataagaagtttaaagt 39024902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 341 - 427
Target Start/End: Original strand, 39701802 - 39701888
Alignment:
Q  341 ggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtggcaagtttatcttaaaatttgtatattctatattaaata 427  Q
    ||||||||||||||||||||||||| ||||||||| || |||||||| | || |||  ||| |||||||| | || |||||||||||    
T  39701802 ggtttttctatcatgtgcaaatttgcacatgttaacaagtttaaagtagtaactttgacttgaaatttgtgttttttatattaaata 39701888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 344 - 456
Target Start/End: Original strand, 7393247 - 7393359
Alignment:
Q  344 ttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtggcaagtttatcttaaaatttgtatattctatattaaatagataacattttaat-a 442  Q
    |||| |||||||||| |||||| ||||||||| ||||||||| | | || ||| ||||  || |||| |||| ||||||||||| ||||| ||||||| |    
T  7393247 ttttttatcatgtgcgaatttgcacatgttaaaaaatttaaaatagtaa-tttgtcttgtaacttgtgtattttatattaaatatataactttttaataa 7393345  T
Q  443 ataattggtgtttt 456  Q
    ||||||||||||||    
T  7393346 ataattggtgtttt 7393359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 340 - 385
Target Start/End: Original strand, 18567414 - 18567459
Alignment:
Q  340 gggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    |||||||||||||||||||||||||| |||||||||||| ||||||    
T  18567414 gggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 18567459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 340 - 385
Target Start/End: Original strand, 26363988 - 26364033
Alignment:
Q  340 gggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||    
T  26363988 gggtttttctatcatgtgcaaatttgcgcatgttaagaaatttaaa 26364033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 340 - 385
Target Start/End: Original strand, 27874679 - 27874724
Alignment:
Q  340 gggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    |||||||||||||||||||||||||| |||||||||||| ||||||    
T  27874679 gggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 27874724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 340 - 385
Target Start/End: Original strand, 28014856 - 28014901
Alignment:
Q  340 gggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    |||||||||||||||||||||||||| |||||||||||| ||||||    
T  28014856 gggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 28014901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 343 - 387
Target Start/End: Original strand, 4080395 - 4080439
Alignment:
Q  343 tttttctatcatgtgcaaatttgtacatgttaagaaatttaaagt 387  Q
    ||||||||||||||||||||||| ||||| |||||||||||||||    
T  4080395 tttttctatcatgtgcaaatttgcacatgataagaaatttaaagt 4080439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 343 - 387
Target Start/End: Original strand, 4084544 - 4084588
Alignment:
Q  343 tttttctatcatgtgcaaatttgtacatgttaagaaatttaaagt 387  Q
    ||||||||||||||||||||||| ||||| |||||||||||||||    
T  4084544 tttttctatcatgtgcaaatttgcacatgataagaaatttaaagt 4084588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 343 - 387
Target Start/End: Original strand, 4102851 - 4102895
Alignment:
Q  343 tttttctatcatgtgcaaatttgtacatgttaagaaatttaaagt 387  Q
    ||||||||||||||||||||||| ||||| |||||||||||||||    
T  4102851 tttttctatcatgtgcaaatttgcacatgataagaaatttaaagt 4102895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 338 - 378
Target Start/End: Complemental strand, 12958682 - 12958642
Alignment:
Q  338 atgggtttttctatcatgtgcaaatttgtacatgttaagaa 378  Q
    ||||||||||||||||||||||||||||||||| |||||||    
T  12958682 atgggtttttctatcatgtgcaaatttgtacatattaagaa 12958642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 343 - 479
Target Start/End: Original strand, 13327942 - 13328078
Alignment:
Q  343 tttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtggcaagtttatcttaaaatttgtatattctatattaaatagataacattttaata 442  Q
    ||||||||||||||||||||||| |||||||||||| |||||| | | || |||  ||| ||| |||| | || |||||||||||  |||||||| |  |    
T  13327942 tttttctatcatgtgcaaatttgcacatgttaagaagtttaaattagtaactttgacttgaaacttgtgttttttatattaaatatgtaacatttaatca 13328041  T
Q  443 ataattggtgttttccaatacaaagttgctacattta 479  Q
    ||||||| || ||| ||||  |||||| |||| ||||    
T  13328042 ataattgttggttttcaatgaaaagttactactttta 13328078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 338 - 382
Target Start/End: Original strand, 15198896 - 15198940
Alignment:
Q  338 atgggtttttctatcatgtgcaaatttgtacatgttaagaaattt 382  Q
    |||||||||||||||||||||||||||| ||||||||| ||||||    
T  15198896 atgggtttttctatcatgtgcaaatttgcacatgttaaaaaattt 15198940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 340 - 387
Target Start/End: Complemental strand, 1203781 - 1203734
Alignment:
Q  340 gggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagt 387  Q
    |||||||||||||||||||||||||| ||||| |||||| ||||||||    
T  1203781 gggtttttctatcatgtgcaaatttgcacatgataagaagtttaaagt 1203734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 340 - 427
Target Start/End: Original strand, 7140457 - 7140544
Alignment:
Q  340 gggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtggcaagtttatcttaaaatttgtatattctatattaaata 427  Q
    |||||||||||||||||||||||||| |||| ||||||| |||||||| | || |||| |||  || |||| | || |||||||||||    
T  7140457 gggtttttctatcatgtgcaaatttgcacatattaagaagtttaaagtagtaattttaacttggaacttgtgttttttatattaaata 7140544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 340 - 387
Target Start/End: Complemental strand, 9801848 - 9801801
Alignment:
Q  340 gggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagt 387  Q
    ||||||||| |||||||||||||||| |||||||||||| ||||||||    
T  9801848 gggtttttcaatcatgtgcaaatttgcacatgttaagaagtttaaagt 9801801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 342 - 385
Target Start/End: Original strand, 13496709 - 13496752
Alignment:
Q  342 gtttttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    |||||||||||||||||||||||| |||||||||||| ||||||    
T  13496709 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 13496752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 342 - 385
Target Start/End: Complemental strand, 22838403 - 22838360
Alignment:
Q  342 gtttttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    |||||||||||||||||||||||| |||||||||||| ||||||    
T  22838403 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 22838360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 342 - 385
Target Start/End: Original strand, 38212944 - 38212987
Alignment:
Q  342 gtttttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    |||||||||||||||||||||||| |||||||||||| ||||||    
T  38212944 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 38212987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 337 - 383
Target Start/End: Original strand, 40225982 - 40226028
Alignment:
Q  337 tatgggtttttctatcatgtgcaaatttgtacatgttaagaaattta 383  Q
    |||| |||||||||||||||||||||||| |||||||||||| ||||    
T  40225982 tatgagtttttctatcatgtgcaaatttgcacatgttaagaagttta 40226028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 340 - 385
Target Start/End: Original strand, 14961661 - 14961706
Alignment:
Q  340 gggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    |||||||||||||||||||||||||| ||||| |||||| ||||||    
T  14961661 gggtttttctatcatgtgcaaatttgcacatgctaagaagtttaaa 14961706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 340 - 385
Target Start/End: Complemental strand, 26834741 - 26834696
Alignment:
Q  340 gggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    |||||||||||||||||||||||||| | || ||||||||||||||    
T  26834741 gggtttttctatcatgtgcaaatttgcatatattaagaaatttaaa 26834696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 340 - 385
Target Start/End: Complemental strand, 31812293 - 31812248
Alignment:
Q  340 gggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    |||||||||||||||||||||||||| |||| ||||||| ||||||    
T  31812293 gggtttttctatcatgtgcaaatttgcacatattaagaagtttaaa 31812248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 343 - 427
Target Start/End: Original strand, 42195 - 42279
Alignment:
Q  343 tttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtggcaagtttatcttaaaatttgtatattctatattaaata 427  Q
    |||||||| |||||||||||||| |||||||||| |   |||||||| |||||||| || ||| |||| |||| || ||||||||    
T  42195 tttttctaacatgtgcaaatttgcacatgttaaggatactaaagtggtaagtttatattgaaacttgtgtattttacattaaata 42279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 341 - 385
Target Start/End: Original strand, 12189587 - 12189631
Alignment:
Q  341 ggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    ||||||||||||||||||||||||| ||||| |||||| ||||||    
T  12189587 ggtttttctatcatgtgcaaatttgcacatgataagaagtttaaa 12189631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 341 - 385
Target Start/End: Original strand, 12434015 - 12434059
Alignment:
Q  341 ggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    ||||||||||||||||||||||||| ||||| |||||| ||||||    
T  12434015 ggtttttctatcatgtgcaaatttgcacatgataagaagtttaaa 12434059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 340 - 444
Target Start/End: Original strand, 35678273 - 35678376
Alignment:
Q  340 gggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtggcaagtttatcttaaaatttgtatattctatattaaatagataacatttta 439  Q
    |||||||| ||||||||||||||||| ||||| |||||| |||||||| | || |||  ||| ||| |||| |||| |||||||||||  |||  |||||    
T  35678273 gggtttttttatcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttgaaacttgtgtatt-tatattaaatatgtaaattttta 35678371  T
Q  440 ataat 444  Q
    |||||    
T  35678372 ataat 35678376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 335 - 427
Target Start/End: Complemental strand, 42781659 - 42781567
Alignment:
Q  335 tttatgggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtggcaagtttatcttaaaatttgtatattctatattaaata 427  Q
    ||||||| |||||||| |||||||||||||| |||||||||| |   |||||| | |||||||| || ||| |||| |||| || ||||||||    
T  42781659 tttatggatttttctaacatgtgcaaatttgcacatgttaaggatactaaagtagtaagtttatattgaaacttgtgtattatacattaaata 42781567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 334 - 378
Target Start/End: Original strand, 43717544 - 43717588
Alignment:
Q  334 ttttatgggtttttctatcatgtgcaaatttgtacatgttaagaa 378  Q
    ||||| |||||||||||||||||||||||||  ||||||||||||    
T  43717544 ttttaagggtttttctatcatgtgcaaatttacacatgttaagaa 43717588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 344 - 387
Target Start/End: Complemental strand, 44091494 - 44091451
Alignment:
Q  344 ttttctatcatgtgcaaatttgtacatgttaagaaatttaaagt 387  Q
    |||||||||||||| ||||||| | |||||||||||||||||||    
T  44091494 ttttctatcatgtgtaaatttgcatatgttaagaaatttaaagt 44091451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 334 - 376
Target Start/End: Complemental strand, 10543814 - 10543772
Alignment:
Q  334 ttttatgggtttttctatcatgtgcaaatttgtacatgttaag 376  Q
    |||||||| |||||||| |||||||||||||| ||||||||||    
T  10543814 ttttatggatttttctaacatgtgcaaatttgcacatgttaag 10543772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 337 - 379
Target Start/End: Original strand, 11946915 - 11946957
Alignment:
Q  337 tatgggtttttctatcatgtgcaaatttgtacatgttaagaaa 379  Q
    ||||| ||||||||||||||| ||||||| |||||||||||||    
T  11946915 tatggatttttctatcatgtgtaaatttgcacatgttaagaaa 11946957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 343 - 385
Target Start/End: Original strand, 28866932 - 28866974
Alignment:
Q  343 tttttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    ||||||||||||||||||||||||| || ||||||| ||||||    
T  28866932 tttttctatcatgtgcaaatttgtatatattaagaagtttaaa 28866974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 349 - 474
Target Start/End: Original strand, 36967077 - 36967203
Alignment:
Q  349 tatcatgtgcaaatttgtacatgttaagaaatttaaagtggcaagtttatcttaaaatttgtatattctatattaaatagataacattttaata-ataat 447  Q
    ||||||||||||||||| |||||||||||| |||||| | | || ||| | || ||| ||| | |||  |||||||||| | ||| ||| |||| |||||    
T  36967077 tatcatgtgcaaatttgcacatgttaagaagtttaaaatagaaactttgtattgaaacttgcacatttaatattaaatataaaacttttgaatatataat 36967176  T
Q  448 tggtgttttccaatacaaagttgctac 474  Q
    || |||||||||| | |||||| ||||    
T  36967177 tgttgttttccaagaaaaagttactac 36967203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 385
Target Start/End: Complemental strand, 297291 - 297230
Alignment:
Q  329 atttcttttatgggtttttctatcatgtg-----caaatttgtacatgttaagaaatttaaa 385  Q
    |||| ||||||||||||||||||||||||     |||||||| |||||||||||| ||||||    
T  297291 attttttttatgggtttttctatcatgtgcaaagcaaatttgcacatgttaagaagtttaaa 297230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 385
Target Start/End: Original strand, 9580107 - 9580152
Alignment:
Q  340 gggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    |||||||| ||||||||||||||||  |||||||||||| ||||||    
T  9580107 gggtttttttatcatgtgcaaatttacacatgttaagaagtttaaa 9580152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 337 - 387
Target Start/End: Original strand, 34405057 - 34405111
Alignment:
Q  337 tatgggtttttctatcatgtgcaa----atttgtacatgttaagaaatttaaagt 387  Q
    ||||||||||||||||||||||||    ||||| |||||||||||| ||||||||    
T  34405057 tatgggtttttctatcatgtgcaaatttatttgcacatgttaagaagtttaaagt 34405111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 385
Target Start/End: Complemental strand, 38843884 - 38843839
Alignment:
Q  340 gggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    |||||||||||||||||| ||||||| ||||| |||||| ||||||    
T  38843884 gggtttttctatcatgtgtaaatttgcacatgctaagaagtttaaa 38843839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 385
Target Start/End: Complemental strand, 45006149 - 45006104
Alignment:
Q  340 gggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    |||||||||||||||  ||||||||| |||||||||||| ||||||    
T  45006149 gggtttttctatcataagcaaatttgcacatgttaagaagtttaaa 45006104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 344 - 385
Target Start/End: Complemental strand, 45518128 - 45518087
Alignment:
Q  344 ttttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    |||||||||||||||||||||||||||  |||||| ||||||    
T  45518128 ttttctatcatgtgcaaatttgtacataataagaagtttaaa 45518087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 344 - 455
Target Start/End: Original strand, 38047940 - 38048051
Alignment:
Q  344 ttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtggcaagtttatcttaaaatttgtatattctatattaaatagataacattttaat-a 442  Q
    |||| ||| ||||||||||||| |||||||||| |||||||| ||| || ||| ||||  ||||||| |||| ||| ||||||| | |   ||||||| |    
T  38047940 ttttttattatgtgcaaatttgcacatgttaagtaatttaaa-tggtaactttgtcttggaatttgtgtattttatcttaaatatacatttttttaataa 38048038  T
Q  443 ataattggtgttt 455  Q
    |||||||||||||    
T  38048039 ataattggtgttt 38048051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0727 (Bit Score: 49; Significance: 8e-19; HSPs: 1)
Name: scaffold0727
Description:

Target: scaffold0727; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 343 - 427
Target Start/End: Complemental strand, 5868 - 5784
Alignment:
Q  343 tttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtggcaagtttatcttaaaatttgtatattctatattaaata 427  Q
    ||||||||||||||||||||||| ||||||||| || |||||||| | || |||| |||||||||||||| || |||||||||||    
T  5868 tttttctatcatgtgcaaatttgcacatgttaaaaagtttaaagtagtaactttaacttaaaatttgtattttttatattaaata 5784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 49; Significance: 8e-19; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 343 - 474
Target Start/End: Original strand, 23638050 - 23638182
Alignment:
Q  343 tttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtggcaagtttatcttaaaatttgtatattctatattaaatagataacattttaat- 441  Q
    ||||| ||||||| ||||||||| ||||||||||||||||||| ||| |||||  |||| ||| |||| |||| ||||||||||| | ||| ||||| |     
T  23638050 tttttatatcatgagcaaatttgcacatgttaagaaatttaaaatggtaagttagtcttgaaacttgtgtattttatattaaatatacaactttttatta 23638149  T
Q  442 aataattggtgttttccaatacaaagttgctac 474  Q
    |||||||| |||||| ||||| |||||| ||||    
T  23638150 aataattgatgtttttcaatagaaagttactac 23638182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 340 - 385
Target Start/End: Complemental strand, 2571448 - 2571403
Alignment:
Q  340 gggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    |||||||||||||||||||||||||| |||||||||||||||||||    
T  2571448 gggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaa 2571403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 340 - 385
Target Start/End: Complemental strand, 10307946 - 10307901
Alignment:
Q  340 gggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    |||||||||||||||||||||||||| |||||||||||||||||||    
T  10307946 gggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaa 10307901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 340 - 389
Target Start/End: Complemental strand, 23523126 - 23523077
Alignment:
Q  340 gggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtgg 389  Q
    |||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  23523126 gggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtgg 23523077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 340 - 389
Target Start/End: Complemental strand, 38389627 - 38389578
Alignment:
Q  340 gggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtgg 389  Q
    |||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  38389627 gggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtgg 38389578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 339 - 427
Target Start/End: Complemental strand, 3863510 - 3863422
Alignment:
Q  339 tgggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtggcaagtttatcttaaaatttgtatattctatattaaata 427  Q
    ||||||||||||||||||||||||||| |||||||||||| |||||||| | || |||| |||  || |||| | || |||||||||||    
T  3863510 tgggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactttagcttggaacttgtgttttttatattaaata 3863422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 340 - 427
Target Start/End: Original strand, 16875023 - 16875110
Alignment:
Q  340 gggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtggcaagtttatcttaaaatttgtatattctatattaaata 427  Q
    ||||||||||||| |||||||||||| |||||||||||| |||||||| | || |||| ||| ||| |||| | || |||||||||||    
T  16875023 gggtttttctatcgtgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttgaaacttgtgttttttatattaaata 16875110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 336 - 387
Target Start/End: Complemental strand, 29686504 - 29686453
Alignment:
Q  336 ttatgggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagt 387  Q
    |||||||||||||||||||||||||||||| ||||| |||||| ||||||||    
T  29686504 ttatgggtttttctatcatgtgcaaatttgcacatgataagaagtttaaagt 29686453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 343 - 432
Target Start/End: Complemental strand, 37332290 - 37332201
Alignment:
Q  343 tttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtggcaagtttatcttaaaatttgtatattctatattaaatagataa 432  Q
    ||||| ||| ||||||||||||  ||||||| | ||||||||| ||| |||||| |||| |||||||| |||| ||||||||||| ||||    
T  37332290 tttttttattatgtgcaaatttacacatgttgataaatttaaaatggtaagtttgtctttaaatttgtgtattttatattaaatatataa 37332201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 341 - 438
Target Start/End: Complemental strand, 49396559 - 49396462
Alignment:
Q  341 ggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtggcaagtttatcttaaaatttgtatattctatattaaatagataacatttt 438  Q
    |||||||||| ||||||||||||||||||| ||||||| |||||||| | || |||   ||||||||| |  ||| ||||||||||| ||||| ||||    
T  49396559 ggtttttctaccatgtgcaaatttgtacatattaagaagtttaaagtagtaaatttgaattaaaatttatgcattttatattaaatatataacctttt 49396462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 340 - 385
Target Start/End: Complemental strand, 50204583 - 50204538
Alignment:
Q  340 gggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    |||||||||||||||||||||||||| |||||||||||| ||||||    
T  50204583 gggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 50204538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 338 - 385
Target Start/End: Complemental strand, 8165828 - 8165781
Alignment:
Q  338 atgggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    |||| ||||||||||||||||||||||| |||||||||||| ||||||    
T  8165828 atggatttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 8165781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 340 - 387
Target Start/End: Complemental strand, 11611156 - 11611109
Alignment:
Q  340 gggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagt 387  Q
    |||||||||||||||||||||||||| ||||| |||||| ||||||||    
T  11611156 gggtttttctatcatgtgcaaatttgcacatgataagaagtttaaagt 11611109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 343 - 443
Target Start/End: Complemental strand, 35095131 - 35095029
Alignment:
Q  343 tttttctatcatgtgcaaatttgtacatgt--taagaaatttaaagtggcaagtttatcttaaaatttgtatattctatattaaatagataacattttaa 440  Q
    ||||| |||||||||||||||| ||||| |  ||| ||||||||| | | || |||||||| |||||| |||||| ||||||||||| | ||| ||||||    
T  35095131 tttttttatcatgtgcaaatttatacatatattaaaaaatttaaaatagtaaatttatcttgaaatttatatattttatattaaatatacaactttttaa 35095032  T
Q  441 taa 443  Q
    |||    
T  35095031 taa 35095029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 342 - 385
Target Start/End: Complemental strand, 40930229 - 40930186
Alignment:
Q  342 gtttttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    |||||||||||||||||||||||| |||||||||||| ||||||    
T  40930229 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 40930186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 343 - 378
Target Start/End: Original strand, 46845144 - 46845179
Alignment:
Q  343 tttttctatcatgtgcaaatttgtacatgttaagaa 378  Q
    ||||||||||||||||||||||||||||||||||||    
T  46845144 tttttctatcatgtgcaaatttgtacatgttaagaa 46845179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 337 - 383
Target Start/End: Original strand, 33474468 - 33474514
Alignment:
Q  337 tatgggtttttctatcatgtgcaaatttgtacatgttaagaaattta 383  Q
    |||| |||||||||||||||||||||||| |||||||||||| ||||    
T  33474468 tatgagtttttctatcatgtgcaaatttgcacatgttaagaagttta 33474514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 338 - 424
Target Start/End: Complemental strand, 40497229 - 40497143
Alignment:
Q  338 atgggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtggcaagtttatcttaaaatttgtatattctatattaa 424  Q
    |||| ||||||||||||||||||||||| ||||| |||||| |||||||| | || |||| |||| || ||||  ||| ||||||||    
T  40497229 atggatttttctatcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttaacttagaacttgtgcattttatattaa 40497143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 340 - 378
Target Start/End: Complemental strand, 51618227 - 51618189
Alignment:
Q  340 gggtttttctatcatgtgcaaatttgtacatgttaagaa 378  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  51618227 gggtttttctatcatgtgcaaatttgcacatgttaagaa 51618189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 343 - 385
Target Start/End: Original strand, 54527707 - 54527749
Alignment:
Q  343 tttttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    ||||||||| ||||||||||||| |||||||||||||||||||    
T  54527707 tttttctattatgtgcaaatttgcacatgttaagaaatttaaa 54527749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 340 - 385
Target Start/End: Original strand, 12515472 - 12515517
Alignment:
Q  340 gggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    |||||||||||||||||| ||||||| ||||||||| |||||||||    
T  12515472 gggtttttctatcatgtgtaaatttgcacatgttaaaaaatttaaa 12515517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 342 - 387
Target Start/End: Complemental strand, 20938235 - 20938190
Alignment:
Q  342 gtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagt 387  Q
    |||||||||||||||||||||||| ||||| |||||| ||||||||    
T  20938235 gtttttctatcatgtgcaaatttgcacatgataagaagtttaaagt 20938190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 340 - 385
Target Start/End: Original strand, 40330293 - 40330338
Alignment:
Q  340 gggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    ||||||||| ||||||||| |||||||||||||||| |||||||||    
T  40330293 gggtttttcaatcatgtgcgaatttgtacatgttaaaaaatttaaa 40330338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 342 - 387
Target Start/End: Original strand, 46492343 - 46492388
Alignment:
Q  342 gtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagt 387  Q
    |||||||||||||||||||||||  ||| |||||||||||||||||    
T  46492343 gtttttctatcatgtgcaaattttcacacgttaagaaatttaaagt 46492388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 343 - 411
Target Start/End: Complemental strand, 27549721 - 27549653
Alignment:
Q  343 tttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtggcaagtttatcttaaaatttgta 411  Q
    ||||||||| ||||||||||||| ||||||||| ||||||| ||| | |||||| ||||| || |||||    
T  27549721 tttttctattatgtgcaaatttgcacatgttaaaaaatttagagtagtaagtttgtcttataacttgta 27549653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 341 - 389
Target Start/End: Original strand, 36426408 - 36426456
Alignment:
Q  341 ggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtgg 389  Q
    ||||||||||||||||| ||||||  |||||||||||| ||||||||||    
T  36426408 ggtttttctatcatgtgtaaatttacacatgttaagaagtttaaagtgg 36426456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 337 - 372
Target Start/End: Complemental strand, 38757887 - 38757852
Alignment:
Q  337 tatgggtttttctatcatgtgcaaatttgtacatgt 372  Q
    ||||||||||||||||||||||||||||| ||||||    
T  38757887 tatgggtttttctatcatgtgcaaatttgcacatgt 38757852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 340 - 427
Target Start/End: Complemental strand, 45983686 - 45983599
Alignment:
Q  340 gggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtggcaagtttatcttaaaatttgtatattctatattaaata 427  Q
    |||||||| ||||||||||||||||| ||| |||||||| |||||| | | || ||||| || ||| ||||| |||  ||||||||||    
T  45983686 gggtttttttatcatgtgcaaatttgcacaggttaagaagtttaaaatagaaattttatattgaaacttgtacatttaatattaaata 45983599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 343 - 456
Target Start/End: Complemental strand, 7940969 - 7940855
Alignment:
Q  343 tttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtggcaagtttatcttaaaatttgtatattctatattaaatagataacattttaat- 441  Q
    |||||||||||| |||||||||  |   ||||||||||||||| ||| || ||| ||||  || || | |||| ||||||||||| ||||| |||||||     
T  7940969 tttttctatcatatgcaaatttacatgcgttaagaaatttaaaatggtaaatttgtcttgtaacttctgtattttatattaaatatataactttttaata 7940870  T
Q  442 aataattggtgtttt 456  Q
    ||||||| |||||||    
T  7940869 aataattagtgtttt 7940855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 329 - 443
Target Start/End: Original strand, 15004406 - 15004520
Alignment:
Q  329 atttcttttatgggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtggcaagtttatcttaaaatttgtatattctatattaaatag 428  Q
    |||| ||||| |||||||||||||  ||| ||| ||  |||||||||| ||  |||| ||| || |||||||||||| ||| || || ||||||||||      
T  15004406 attttttttaagggtttttctatcgcgtgtaaaattacacatgttaaggaaaataaaatggtaaatttatcttaaaacttgaatcttttatattaaatgt 15004505  T
Q  429 ataacattttaataa 443  Q
    ||||| |||||||||    
T  15004506 ataactttttaataa 15004520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 340 - 378
Target Start/End: Complemental strand, 25633178 - 25633140
Alignment:
Q  340 gggtttttctatcatgtgcaaatttgtacatgttaagaa 378  Q
    |||||||||||||||||||||||||| || |||||||||    
T  25633178 gggtttttctatcatgtgcaaatttgaacttgttaagaa 25633140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 339 - 385
Target Start/End: Complemental strand, 32553547 - 32553501
Alignment:
Q  339 tgggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    ||||||||||||||||||| ||||||  |||||||||||| ||||||    
T  32553547 tgggtttttctatcatgtgtaaatttacacatgttaagaagtttaaa 32553501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 343 - 385
Target Start/End: Complemental strand, 42180229 - 42180187
Alignment:
Q  343 tttttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    ||||||||||||||| ||||||| |||||||||||| ||||||    
T  42180229 tttttctatcatgtgtaaatttgcacatgttaagaagtttaaa 42180187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 346 - 387
Target Start/End: Complemental strand, 11611088 - 11611047
Alignment:
Q  346 ttctatcatgtgcaaatttgtacatgttaagaaatttaaagt 387  Q
    |||||||||||||||||||| ||||| |||||| ||||||||    
T  11611088 ttctatcatgtgcaaatttgcacatgataagaagtttaaagt 11611047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 342 - 387
Target Start/End: Complemental strand, 13495472 - 13495427
Alignment:
Q  342 gtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagt 387  Q
    |||||||||||||||| ||||||| ||||| |||||| ||||||||    
T  13495472 gtttttctatcatgtgaaaatttgcacatgataagaagtttaaagt 13495427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 384
Target Start/End: Complemental strand, 31318818 - 31318777
Alignment:
Q  343 tttttctatcatgtgcaaatttgtacatgttaagaaatttaa 384  Q
    ||||||||||||||| ||||||| |||||||||||| |||||    
T  31318818 tttttctatcatgtgaaaatttgcacatgttaagaagtttaa 31318777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 342 - 462
Target Start/End: Original strand, 35414809 - 35414930
Alignment:
Q  342 gtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtggcaagtttatcttaaaatttgtatattctatattaaatagataacattttaa- 440  Q
    |||||||||||||||||||||||  |||||||||||| || ||| | | || ||||| ||  || ||||||||| | |||| |||| ||||| ||| ||     
T  35414809 gtttttctatcatgtgcaaatttacacatgttaagaagttcaaaatagtaactttatattggaagttgtatattttgtatttaatatataacttttgaac 35414908  T
Q  441 taataattggtgttttccaata 462  Q
     |||||||| |||||| |||||    
T  35414909 aaataattgttgtttttcaata 35414930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 385
Target Start/End: Complemental strand, 51401620 - 51401575
Alignment:
Q  340 gggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    |||||||||||| |||| |||||||| |||||||||||| ||||||    
T  51401620 gggtttttctattatgtacaaatttgcacatgttaagaagtttaaa 51401575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 376
Target Start/End: Original strand, 51567821 - 51567854
Alignment:
Q  343 tttttctatcatgtgcaaatttgtacatgttaag 376  Q
    ||||||||||||||||||||||| ||||||||||    
T  51567821 tttttctatcatgtgcaaatttgcacatgttaag 51567854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 341 - 385
Target Start/End: Complemental strand, 2566661 - 2566617
Alignment:
Q  341 ggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    ||||||||||||||||||||||||  ||||||||  |||||||||    
T  2566661 ggtttttctatcatgtgcaaatttacacatgttagaaaatttaaa 2566617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 345 - 385
Target Start/End: Original strand, 23803049 - 23803089
Alignment:
Q  345 tttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    |||||||||| |||||||||| |||||||||||| ||||||    
T  23803049 tttctatcatatgcaaatttgcacatgttaagaagtttaaa 23803089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 378 - 426
Target Start/End: Original strand, 28992809 - 28992857
Alignment:
Q  378 aatttaaagtggcaagtttatcttaaaatttgtatattctatattaaat 426  Q
    |||||||| ||  |||||||||||||||||||| |||| ||||||||||    
T  28992809 aatttaaaatgataagtttatcttaaaatttgtgtattttatattaaat 28992857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 343 - 387
Target Start/End: Complemental strand, 41151810 - 41151766
Alignment:
Q  343 tttttctatcatgtgcaaatttgtacatgttaagaaatttaaagt 387  Q
    ||||||||||||||||||||||  ||||| |||||| ||||||||    
T  41151810 tttttctatcatgtgcaaatttacacatgataagaagtttaaagt 41151766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 344 - 434
Target Start/End: Original strand, 1445 - 1535
Alignment:
Q  344 ttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtggcaagtttatcttaaaatttgtatattctatattaaatagataaca 434  Q
    |||| ||||||||||||||||| |||||||||||| ||||||   | || |||||||||||||||||  ||| ||||||||||| ||||||    
T  1445 ttttttatcatgtgcaaatttgcacatgttaagaagtttaaaagagtaattttatcttaaaatttgttcattttatattaaatatataaca 1535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 338 - 387
Target Start/End: Original strand, 52775 - 52824
Alignment:
Q  338 atgggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagt 387  Q
    |||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  52775 atgggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagt 52824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 334 - 387
Target Start/End: Complemental strand, 182228 - 182175
Alignment:
Q  334 ttttatgggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagt 387  Q
    ||||| |||||||||||||||||| |||||||||||||||||||| ||||||||    
T  182228 ttttaagggtttttctatcatgtgtaaatttgtacatgttaagaagtttaaagt 182175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 338 - 387
Target Start/End: Complemental strand, 145859 - 145810
Alignment:
Q  338 atgggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagt 387  Q
    |||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  145859 atgggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagt 145810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 343 - 462
Target Start/End: Complemental strand, 22641 - 22521
Alignment:
Q  343 tttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtggcaagtttatcttaaaatttgtatattctatattaaatagataacattttaat- 441  Q
    ||||||||| |||| |||||||| ||||||||||||||||||| ||  || ||| ||||| || || | |||||||| ||||||| ||| | |||||||     
T  22641 tttttctattatgtacaaatttgcacatgttaagaaatttaaaatgttaattttgtcttagaacttttgtattctatgttaaatatatagctttttaata 22542  T
Q  442 aataattggtgttttccaata 462  Q
    |||||||| |||||| |||||    
T  22541 aataattgatgtttttcaata 22521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 2)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 340 - 388
Target Start/End: Original strand, 37112 - 37160
Alignment:
Q  340 gggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtg 388  Q
    |||||||||||||||||||||||||| |||||||||||| |||||||||    
T  37112 gggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtg 37160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 342 - 385
Target Start/End: Complemental strand, 41160 - 41117
Alignment:
Q  342 gtttttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    |||||||||||||||| ||||||||| |||||||||| ||||||    
T  41160 gtttttctatcatgtgtaaatttgtatatgttaagaagtttaaa 41117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 341 - 385
Target Start/End: Complemental strand, 13264 - 13220
Alignment:
Q  341 ggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    ||||||||||||||||||||||||| |||||||||||| ||||||    
T  13264 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaa 13220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0073 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0073
Description:

Target: scaffold0073; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 340 - 387
Target Start/End: Original strand, 16533 - 16580
Alignment:
Q  340 gggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagt 387  Q
    |||||||| ||||||||||||||||| |||||||||||| ||||||||    
T  16533 gggtttttatatcatgtgcaaatttgcacatgttaagaagtttaaagt 16580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0229 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0229
Description:

Target: scaffold0229; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 328 - 385
Target Start/End: Original strand, 24513 - 24570
Alignment:
Q  328 catttcttttatgggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    ||||| ||||| | |||||||||||||||||||||||  |||||| ||||||||||||    
T  24513 cattttttttaagagtttttctatcatgtgcaaatttacacatgtaaagaaatttaaa 24570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 343 - 432
Target Start/End: Original strand, 191316 - 191404
Alignment:
Q  343 tttttctatcatgtgcaaatttgtacatgttaagaaatttaaagtggcaagtttatcttaaaatttgtatattctatattaaatagataa 432  Q
    ||||| ||| ||||||||||||| ||||||||||||||||||| || ||| ||| ||||  || |||| |||| ||||||||||| ||||    
T  191316 tttttttattatgtgcaaatttgcacatgttaagaaatttaaaatgacaaatttgtcttggaa-ttgtgtattttatattaaatatataa 191404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 339 - 387
Target Start/End: Original strand, 3410 - 3458
Alignment:
Q  339 tgggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaagt 387  Q
    ||||||||||||||||||| ||||||| |||| ||||||| ||||||||    
T  3410 tgggtttttctatcatgtgtaaatttgcacatattaagaagtttaaagt 3458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0618 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 344 - 387
Target Start/End: Original strand, 8416 - 8459
Alignment:
Q  344 ttttctatcatgtgcaaatttgtacatgttaagaaatttaaagt 387  Q
    |||||||||||||| ||||||| | |||||||||||||||||||    
T  8416 ttttctatcatgtgtaaatttgcatatgttaagaaatttaaagt 8459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 341 - 385
Target Start/End: Original strand, 44293 - 44337
Alignment:
Q  341 ggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaa 385  Q
    ||||||||||||||||||||||||| |||| |||| || ||||||    
T  44293 ggtttttctatcatgtgcaaatttgcacatattaaaaagtttaaa 44337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 342 - 378
Target Start/End: Original strand, 94018 - 94054
Alignment:
Q  342 gtttttctatcatgtgcaaatttgtacatgttaagaa 378  Q
    |||||||||||||||||||||||| | ||||||||||    
T  94018 gtttttctatcatgtgcaaatttgcatatgttaagaa 94054  T

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