View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3434_low_26 (Length: 278)

Name: NF3434_low_26
Description: NF3434
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3434_low_26
NF3434_low_26
[»] chr5 (43 HSPs)
chr5 (16-256)||(26691630-26691871)
chr5 (16-256)||(26961362-26961603)
chr5 (18-256)||(17138119-17138357)
chr5 (18-256)||(30284470-30284711)
chr5 (28-256)||(26716287-26716516)
chr5 (28-256)||(26986027-26986256)
chr5 (28-266)||(3934662-3934901)
chr5 (18-256)||(5612307-5612546)
chr5 (28-225)||(43357634-43357832)
chr5 (18-226)||(18001831-18002036)
chr5 (28-145)||(25749731-25749849)
chr5 (18-146)||(22737963-22738091)
chr5 (87-256)||(1795406-1795576)
chr5 (172-256)||(35746271-35746355)
chr5 (38-179)||(27938250-27938392)
chr5 (18-256)||(34032383-34032615)
chr5 (158-228)||(1920878-1920948)
chr5 (18-122)||(27085497-27085602)
chr5 (156-256)||(32728713-32728813)
chr5 (120-257)||(32624890-32625027)
chr5 (28-145)||(42365982-42366100)
chr5 (156-225)||(27085409-27085478)
chr5 (172-256)||(30918392-30918476)
chr5 (117-256)||(39690728-39690867)
chr5 (119-256)||(32707798-32707935)
chr5 (156-253)||(9792336-9792433)
chr5 (28-132)||(35746196-35746300)
chr5 (156-256)||(1639786-1639886)
chr5 (156-256)||(11906232-11906332)
chr5 (156-256)||(30777526-30777626)
chr5 (117-256)||(33829767-33829902)
chr5 (156-256)||(41392716-41392816)
chr5 (18-65)||(41233512-41233559)
chr5 (18-126)||(5722121-5722230)
chr5 (18-145)||(11694328-11694454)
chr5 (209-256)||(6243215-6243262)
chr5 (157-256)||(14836395-14836494)
chr5 (209-256)||(27938177-27938224)
chr5 (156-229)||(3701239-3701312)
chr5 (156-241)||(5986072-5986157)
chr5 (21-62)||(11907500-11907541)
chr5 (158-203)||(21251532-21251577)
chr5 (172-256)||(41233393-41233477)
[»] chr3 (46 HSPs)
chr3 (16-256)||(55268879-55269116)
chr3 (18-251)||(25700779-25701014)
chr3 (18-256)||(6134247-6134486)
chr3 (16-256)||(30787424-30787666)
chr3 (28-256)||(41741947-41742176)
chr3 (18-256)||(28968524-28968764)
chr3 (32-256)||(22289600-22289825)
chr3 (18-256)||(21157594-21157833)
chr3 (18-256)||(7899583-7899823)
chr3 (21-256)||(20510024-20510260)
chr3 (18-179)||(47642097-47642259)
chr3 (21-219)||(19421467-19421666)
chr3 (18-256)||(38888951-38889183)
chr3 (18-194)||(19878967-19879145)
chr3 (28-256)||(2122718-2122952)
chr3 (28-256)||(13748323-13748551)
chr3 (156-256)||(30226434-30226534)
chr3 (18-194)||(13353060-13353238)
chr3 (28-213)||(45347354-45347541)
chr3 (18-135)||(45057166-45057284)
chr3 (119-256)||(52684215-52684352)
chr3 (38-133)||(29915929-29916025)
chr3 (38-133)||(29965082-29965178)
chr3 (28-256)||(42229688-42229907)
chr3 (86-256)||(39663972-39664140)
chr3 (104-256)||(48333029-48333177)
chr3 (156-252)||(3983715-3983811)
chr3 (117-256)||(40497344-40497483)
chr3 (18-100)||(983356-983439)
chr3 (119-256)||(28882645-28882782)
chr3 (117-253)||(25937029-25937165)
chr3 (18-62)||(2567134-2567178)
chr3 (156-256)||(35389764-35389864)
chr3 (184-256)||(42464939-42465011)
chr3 (119-256)||(22310719-22310856)
chr3 (156-256)||(983208-983308)
chr3 (156-256)||(7327726-7327826)
chr3 (184-256)||(29915875-29915947)
chr3 (184-256)||(29965028-29965100)
chr3 (205-256)||(1528516-1528567)
chr3 (86-144)||(19349538-19349596)
chr3 (117-202)||(28704795-28704880)
chr3 (156-256)||(1679702-1679802)
chr3 (156-228)||(33239992-33240064)
chr3 (156-256)||(48122839-48122939)
chr3 (18-62)||(52684536-52684580)
[»] chr2 (39 HSPs)
chr2 (18-253)||(34146197-34146433)
chr2 (22-256)||(2319289-2319524)
chr2 (28-256)||(44156611-44156841)
chr2 (19-263)||(21104490-21104734)
chr2 (18-256)||(3545445-3545685)
chr2 (18-253)||(31236051-31236287)
chr2 (18-256)||(35342331-35342571)
chr2 (38-253)||(12206042-12206257)
chr2 (28-256)||(1005527-1005755)
chr2 (28-256)||(8482792-8483021)
chr2 (28-203)||(3563907-3564083)
chr2 (38-256)||(14217035-14217258)
chr2 (96-256)||(35996657-35996816)
chr2 (28-146)||(14824263-14824382)
chr2 (28-256)||(4561802-4562032)
chr2 (117-256)||(7876728-7876867)
chr2 (119-256)||(33324832-33324969)
chr2 (156-256)||(4170506-4170606)
chr2 (38-256)||(4355339-4355545)
chr2 (28-142)||(24585662-24585778)
chr2 (156-256)||(37134302-37134402)
chr2 (38-132)||(5588176-5588271)
chr2 (157-256)||(28746657-28746756)
chr2 (28-256)||(1776311-1776540)
chr2 (28-125)||(40431896-40431994)
chr2 (18-122)||(10573642-10573747)
chr2 (156-261)||(40497389-40497494)
chr2 (156-256)||(38602326-38602426)
chr2 (162-256)||(24585544-24585637)
chr2 (158-256)||(25933579-25933677)
chr2 (18-67)||(9293309-9293358)
chr2 (156-256)||(6497653-6497753)
chr2 (117-256)||(7807339-7807478)
chr2 (156-256)||(22484281-22484381)
chr2 (126-228)||(40308871-40308973)
chr2 (158-253)||(40432003-40432094)
chr2 (156-256)||(16561814-16561914)
chr2 (156-256)||(18300986-18301086)
chr2 (156-256)||(22570951-22571051)
[»] chr4 (42 HSPs)
chr4 (18-256)||(46431798-46432037)
chr4 (28-256)||(40694084-40694313)
chr4 (18-256)||(17892262-17892501)
chr4 (18-133)||(44521911-44522027)
chr4 (28-256)||(36511808-36512038)
chr4 (18-202)||(42630349-42630535)
chr4 (21-132)||(49470419-49470530)
chr4 (18-224)||(24793596-24793803)
chr4 (18-256)||(37992399-37992637)
chr4 (28-179)||(31946101-31946253)
chr4 (18-179)||(36943760-36943922)
chr4 (16-145)||(3109168-3109298)
chr4 (18-253)||(2586353-2586589)
chr4 (16-146)||(754294-754425)
chr4 (28-138)||(51858927-51859038)
chr4 (156-256)||(41145626-41145726)
chr4 (28-145)||(1177102-1177220)
chr4 (119-256)||(52721278-52721415)
chr4 (117-256)||(8064074-8064213)
chr4 (117-256)||(19738711-19738850)
chr4 (119-256)||(52122836-52122973)
chr4 (156-253)||(5325725-5325822)
chr4 (28-136)||(51674923-51675032)
chr4 (120-256)||(53322351-53322487)
chr4 (18-62)||(24784581-24784625)
chr4 (18-62)||(24823641-24823685)
chr4 (18-62)||(52721563-52721607)
chr4 (169-256)||(44521994-44522081)
chr4 (187-256)||(44121877-44121946)
chr4 (156-201)||(49069249-49069294)
chr4 (156-256)||(4400482-4400582)
chr4 (156-256)||(5834844-5834944)
chr4 (164-256)||(27981910-27982002)
chr4 (156-256)||(28377010-28377110)
chr4 (18-62)||(39957897-39957941)
chr4 (88-256)||(47607124-47607295)
chr4 (16-97)||(722493-722575)
chr4 (156-201)||(21637734-21637779)
chr4 (169-253)||(51858849-51858933)
chr4 (168-256)||(1176995-1177083)
chr4 (196-256)||(10257714-10257774)
chr4 (156-256)||(42472573-42472673)
[»] chr7 (42 HSPs)
chr7 (18-256)||(44960000-44960239)
chr7 (28-256)||(24956262-24956491)
chr7 (18-257)||(40041389-40041628)
chr7 (18-256)||(35159876-35160114)
chr7 (28-257)||(23970001-23970231)
chr7 (19-145)||(36757882-36758009)
chr7 (19-145)||(36767406-36767533)
chr7 (28-253)||(21409405-21409630)
chr7 (19-117)||(36763662-36763761)
chr7 (28-180)||(554765-554918)
chr7 (18-192)||(21179911-21180086)
chr7 (18-135)||(15878289-15878407)
chr7 (156-256)||(1043075-1043175)
chr7 (16-146)||(1400131-1400262)
chr7 (117-256)||(34238169-34238308)
chr7 (38-203)||(44269789-44269955)
chr7 (119-256)||(38263010-38263147)
chr7 (18-257)||(33454080-33454320)
chr7 (125-256)||(26845869-26846000)
chr7 (117-256)||(40095661-40095800)
chr7 (18-135)||(23078974-23079092)
chr7 (156-256)||(9250426-9250526)
chr7 (156-256)||(25969408-25969508)
chr7 (117-256)||(27353932-27354071)
chr7 (156-256)||(34122621-34122721)
chr7 (117-256)||(48163419-48163558)
chr7 (198-256)||(7416635-7416693)
chr7 (119-256)||(11829700-11829837)
chr7 (156-202)||(19820868-19820914)
chr7 (159-253)||(38064609-38064703)
chr7 (117-257)||(16850796-16850936)
chr7 (156-253)||(27398051-27398148)
chr7 (18-196)||(38064736-38064916)
chr7 (156-256)||(18113943-18114043)
chr7 (117-256)||(27555334-27555473)
chr7 (18-62)||(47719953-47719997)
chr7 (156-203)||(23311786-23311833)
chr7 (18-64)||(11058652-11058698)
chr7 (156-256)||(11058363-11058463)
chr7 (28-108)||(48153704-48153785)
chr7 (156-200)||(8056338-8056382)
chr7 (156-256)||(19510534-19510634)
[»] chr1 (41 HSPs)
chr1 (18-253)||(41675855-41676090)
chr1 (28-256)||(29167961-29168190)
chr1 (27-256)||(9781656-9781886)
chr1 (64-256)||(48715137-48715329)
chr1 (20-194)||(24589991-24590166)
chr1 (18-145)||(47654789-47654917)
chr1 (18-179)||(38218474-38218636)
chr1 (16-133)||(2472786-2472904)
chr1 (38-257)||(9528728-9528944)
chr1 (18-117)||(36551537-36551637)
chr1 (18-219)||(24851525-24851723)
chr1 (28-256)||(29861815-29862040)
chr1 (156-256)||(34432387-34432487)
chr1 (117-256)||(6916839-6916978)
chr1 (117-256)||(37104134-37104273)
chr1 (117-256)||(38330441-38330580)
chr1 (117-256)||(52895678-52895817)
chr1 (119-256)||(1036473-1036610)
chr1 (119-256)||(1043241-1043378)
chr1 (156-229)||(2364718-2364791)
chr1 (117-256)||(40776009-40776149)
chr1 (117-256)||(28949206-28949345)
chr1 (38-145)||(34096438-34096546)
chr1 (18-65)||(33039816-33039863)
chr1 (157-256)||(43189669-43189768)
chr1 (156-256)||(14167098-14167198)
chr1 (156-256)||(20409558-20409658)
chr1 (169-256)||(2472871-2472958)
chr1 (119-253)||(28659267-28659401)
chr1 (117-253)||(3426865-3427001)
chr1 (156-257)||(25256629-25256730)
chr1 (92-253)||(33039630-33039790)
chr1 (156-253)||(37922284-37922381)
chr1 (156-256)||(5984241-5984341)
chr1 (156-256)||(13012996-13013096)
chr1 (156-256)||(31653406-31653506)
chr1 (156-256)||(37346852-37346952)
chr1 (157-256)||(3708284-3708383)
chr1 (156-214)||(2222983-2223041)
chr1 (156-253)||(32381063-32381160)
chr1 (38-145)||(10763779-10763886)
[»] chr6 (20 HSPs)
chr6 (18-253)||(6707906-6708142)
chr6 (51-256)||(26327169-26327374)
chr6 (28-263)||(19128161-19128396)
chr6 (18-256)||(13607650-13607889)
chr6 (16-179)||(7255011-7255176)
chr6 (18-142)||(10894384-10894509)
chr6 (18-253)||(11105303-11105539)
chr6 (28-256)||(234320-234552)
chr6 (117-256)||(31195834-31195973)
chr6 (117-256)||(1036791-1036930)
chr6 (25-135)||(13045248-13045359)
chr6 (18-146)||(31079726-31079852)
chr6 (156-256)||(3299155-3299255)
chr6 (156-256)||(27083999-27084099)
chr6 (16-133)||(13061237-13061355)
chr6 (18-62)||(3212778-3212822)
chr6 (28-123)||(27084121-27084217)
chr6 (119-256)||(8356972-8357109)
chr6 (156-229)||(7188783-7188856)
chr6 (184-256)||(32017991-32018063)
[»] chr8 (30 HSPs)
chr8 (38-256)||(27886204-27886423)
chr8 (38-256)||(27944862-27945081)
chr8 (18-256)||(38388681-38388920)
chr8 (28-256)||(37372273-37372503)
chr8 (38-253)||(27968120-27968338)
chr8 (38-256)||(32424935-32425154)
chr8 (28-256)||(3891976-3892207)
chr8 (38-253)||(28025106-28025324)
chr8 (18-146)||(7411726-7411855)
chr8 (156-256)||(5818315-5818415)
chr8 (117-256)||(22201302-22201441)
chr8 (38-256)||(29355637-29355857)
chr8 (38-203)||(20182440-20182606)
chr8 (117-256)||(34901347-34901486)
chr8 (119-256)||(32759387-32759524)
chr8 (117-256)||(28876530-28876670)
chr8 (117-256)||(13422222-13422361)
chr8 (156-208)||(24100197-24100249)
chr8 (156-256)||(32877451-32877551)
chr8 (156-253)||(45217224-45217321)
chr8 (156-256)||(12580557-12580657)
chr8 (117-256)||(16384631-16384770)
chr8 (157-253)||(30804750-30804846)
chr8 (156-256)||(36483449-36483549)
chr8 (18-60)||(40412754-40412796)
chr8 (156-256)||(2872914-2873014)
chr8 (156-256)||(6028501-6028601)
chr8 (156-256)||(25022139-25022239)
chr8 (23-62)||(8170976-8171015)
chr8 (211-253)||(27109223-27109265)
[»] scaffold0285 (1 HSPs)
scaffold0285 (87-256)||(13264-13432)
[»] scaffold0640 (1 HSPs)
scaffold0640 (119-256)||(8059-8196)
[»] scaffold0250 (1 HSPs)
scaffold0250 (119-256)||(5526-5663)
[»] scaffold0240 (1 HSPs)
scaffold0240 (160-253)||(10617-10710)


Alignment Details
Target: chr5 (Bit Score: 135; Significance: 2e-70; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 16 - 256
Target Start/End: Complemental strand, 26691871 - 26691630
Alignment:
Q  16 ataacacatcagtactcaaaacttaagttattttagttaacattaattgg-aagtatcggggaagatatcaatgcaggataattatcgcatactatcctg 114  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | |||||||||||||||||||||||||||||||||||||    
T  26691871 ataacacatcagtactcaaaacttaagttattttagttaacattaattgggaagtatcggagcagatatcaatgcaggataattatcgcatactatcctg 26691772  T
Q  115 atatgtatcagaaagtatcggataattattttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcg 214  Q
    ||| ||||| | ||||||||||||||||||||         ||||||||||||||||||||||||||| |||| |||||| ||||||||  |||||||||    
T  26691771 atacgtatcgggaagtatcggataattatttttaaaaaaaataaaatttaatcttcggatactctcttgatacgtatcgggaagtatcagacaggtatcg 26691672  T
Q  215 atgcatgatacgcagaagatacaatacatcatccattttgaa 256  Q
     ||||  ||||||||  ||||| |||| ||||| ||||||||    
T  26691671 gtgcagaatacgcaggggatacgatacgtcatctattttgaa 26691630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 16 - 256
Target Start/End: Complemental strand, 26961603 - 26961362
Alignment:
Q  16 ataacacatcagtactcaaaacttaagttattttagttaacattaattgg-aagtatcggggaagatatcaatgcaggataattatcgcatactatcctg 114  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | |||||||||||||||||||||||||||||||||||||    
T  26961603 ataacacatcagtactcaaaacttaagttattttagttaacattaattgggaagtatcggagcagatatcaatgcaggataattatcgcatactatcctg 26961504  T
Q  115 atatgtatcagaaagtatcggataattattttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcg 214  Q
    ||| ||||| | ||||||||||||||||||||         ||||||||||||||||||||||||||| |||| |||||| ||||||||  |||||||||    
T  26961503 atacgtatcgggaagtatcggataattatttttaaaaaaaataaaatttaatcttcggatactctcttgatacgtatcgggaagtatcagacaggtatcg 26961404  T
Q  215 atgcatgatacgcagaagatacaatacatcatccattttgaa 256  Q
     ||||  ||||||||  ||||| |||| ||||| ||||||||    
T  26961403 gtgcagaatacgcaggggatacgatacgtcatctattttgaa 26961362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 18 - 256
Target Start/End: Original strand, 17138119 - 17138357
Alignment:
Q  18 aacacatcagtactcaaaacttaagttattttagttaacattaattgg-aagtatcggggaagatatcaatgcaggataattatcgcatactatcctgat 116  Q
    ||||||||| ||||||| | |||||||||||||||||||||||||||| || |||| ||| |||||||| |||||||||||||||| ||||| |||||||    
T  17138119 aacacatcaatactcaagagttaagttattttagttaacattaattgggaaatatcagggcagatatcagtgcaggataattatcggatactctcctgat 17138218  T
Q  117 atgtatcagaaagtatcggataattattttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgat 216  Q
    | ||||| | ||||||| |||||||| |||         |||||||||||||||||||| |||| | |||| |||||| |||||||| |||  ||||| |    
T  17138219 acgtatcgggaagtatcagataattactttttaaaaaaataaaatttaatcttcggatattctcctgatacgtatcgggaagtatcaggcaattatcggt 17138318  T
Q  217 gcatgatacgcagaagatacaatacatcatccattttgaa 256  Q
    ||| |||||||||  ||||| |||| ||||| ||||||||    
T  17138319 gcaggatacgcaggggatac-atacgtcatctattttgaa 17138357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 18 - 256
Target Start/End: Original strand, 30284470 - 30284711
Alignment:
Q  18 aacacatcagtactcaaaacttaagttattttagttaacattaattgg-aagtatcggggaagatatcaatgcaggataattatcgcatactatcctgat 116  Q
    ||||||||| ||||||  | |||||||||||||||||||||||||||| || |||| ||| |||||||  ||||| |||||||| | ||||| ||||| |    
T  30284470 aacacatcactactcaggagttaagttattttagttaacattaattgggaaatatcagggcagatatcggtgcagaataattattgaatactctcctggt 30284569  T
Q  117 a--tgtatcagaaagtatcggataattattttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcg 214  Q
    |  |||||| | ||||||||||||||||||||         ||||||||||||||||||||||||| | |||| |||||| |||||||| ||||||||||    
T  30284570 acgtgtatcgggaagtatcggataattatttttttttaaaataaaatttaatcttcggatactctcctgatacgtatcgggaagtatcaggcaggtatcg 30284669  T
Q  215 atgcatgatacgcagaagatacaatacatcatccattttgaa 256  Q
     |||| |||||||||  |||||  ||| ||||||||||||||    
T  30284670 gtgcaggatacgcaggggatacggtacgtcatccattttgaa 30284711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 28 - 256
Target Start/End: Complemental strand, 26716516 - 26716287
Alignment:
Q  28 tactcaaaacttaagttattttagttaacattaattgg-aagtatcggggaagatatcaatgcaggataattatcgcatactatcctgatatgtatcaga 126  Q
    ||||||| | |||||||||||||  ||||||||||||| |||||| | || || |||   |||||||||||||||| ||||| |||||||| ||||| |     
T  26716516 tactcaagagttaagttattttaactaacattaattgggaagtattgaggcaggtattggtgcaggataattatcggatactctcctgatacgtatcggg 26716417  T
Q  127 aagtatcggataattattttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgcatgatacg 226  Q
    ||||||||||||||||||||         ||||||||||||||||||||||||  | |||| |||||| |||||||| |||||||||| || | ||||||    
T  26716416 aagtatcggataattattttttaaaaaaataaaatttaatcttcggatactcttctgatacgtatcgggaagtatcaggcaggtatcggtgtaggatacg 26716317  T
Q  227 cagaagatacaatacatcatccattttgaa 256  Q
    |||  ||||| |||| ||||||||||||||    
T  26716316 caggggatacgatacgtcatccattttgaa 26716287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 28 - 256
Target Start/End: Complemental strand, 26986256 - 26986027
Alignment:
Q  28 tactcaaaacttaagttattttagttaacattaattgg-aagtatcggggaagatatcaatgcaggataattatcgcatactatcctgatatgtatcaga 126  Q
    ||||||| | |||||||||||||  ||||||||||||| |||||| | || || |||   |||||||||||||||| ||||| |||||||| ||||| |     
T  26986256 tactcaagagttaagttattttaactaacattaattgggaagtattgaggcaggtattggtgcaggataattatcggatactctcctgatacgtatcggg 26986157  T
Q  127 aagtatcggataattattttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgcatgatacg 226  Q
    ||||||||||||||||||||         ||||||||||||||||||||||||  | |||| |||||| |||||||| |||||||||| || | ||||||    
T  26986156 aagtatcggataattattttttaaaaaaataaaatttaatcttcggatactcttctgatacgtatcgggaagtatcaggcaggtatcggtgtaggatacg 26986057  T
Q  227 cagaagatacaatacatcatccattttgaa 256  Q
    |||  ||||| |||| ||||||||||||||    
T  26986056 caggggatacgatacgtcatccattttgaa 26986027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 28 - 266
Target Start/End: Original strand, 3934662 - 3934901
Alignment:
Q  28 tactcaaaacttaagttattttagttaacattaattgg-aagtatcggggaagatatcaatgcaggataattatcgcatactatcctgatatgtatcaga 126  Q
    ||||||| | |||||||||||||||||||||||||||| ||||||   || || |||| ||||||||||||||||| ||||| || ||||| ||||| ||    
T  3934662 tactcaagagttaagttattttagttaacattaattgggaagtatttaggcaggtatcgatgcaggataattatcggatactctcatgatacgtatcgga 3934761  T
Q  127 aagtatcggataattatt-ttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgcatgatac 225  Q
    |||||| ||||||||||| ||         ||||||||||||||||||||||||| | |||| |||||| |||||||| | |||||||| |||  |||||    
T  3934762 aagtattggataattattatttttaaaaaataaaatttaatcttcggatactctcctgatacgtatcggtaagtatcaggtaggtatcggtgcgggatac 3934861  T
Q  226 gcagaagatacaatacatcatccattttgaaagtattgagg 266  Q
    ||||  |||| ||||| ||||||||||| ||||||| ||||    
T  3934862 gcaggggatataatacgtcatccatttt-aaagtatggagg 3934901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 18 - 256
Target Start/End: Original strand, 5612307 - 5612546
Alignment:
Q  18 aacacatcagtactcaaaacttaagttattttagttaacattaattgg-aagtatcggggaagatatcaatgcaggataattatcgcatactatcctgat 116  Q
    ||||||||| ||||| | | ||||||||||||| |||||||||||||| || |||||||| || || |  |||||||||||||||  ||||| |||||||    
T  5612307 aacacatcaatactcgagagttaagttattttaattaacattaattgggaactatcggggcaggtagcggtgcaggataattatcagatactctcctgat 5612406  T
Q  117 atgtatcagaaagtatcggataattattttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgat 216  Q
    | ||||||| ||||||||||||||||||||         ||||||||||||||||||||||||| |  ||| |||| |||||||||  |||| |||| ||    
T  5612407 acgtatcaggaagtatcggataattattttttaaaaaaataaaatttaatcttcggatactctcctggtacgtatcagaaagtatcgggcagttatcaat 5612506  T
Q  217 gcatgatacgcagaagatacaatacatcatccattttgaa 256  Q
    ||| ||| | ||||  |||| |||| ||||||||||||||    
T  5612507 gcaggatgcacagagaatacgatacgtcatccattttgaa 5612546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 28 - 225
Target Start/End: Original strand, 43357634 - 43357832
Alignment:
Q  28 tactcaaaacttaagttattttagttaacattaattgg-aagtatcggggaagatatcaatgcaggataattatcgcatactatcctgatatgtatcaga 126  Q
    ||||||| | ||||||||||||| ||||| |||||||| || ||| | || || |||   |||||||||||||||  ||||| |||||||| ||||| |     
T  43357634 tactcaagagttaagttattttatttaacgttaattgggaattattgaggcaggtataggtgcaggataattatcagatactttcctgatacgtatcggg 43357733  T
Q  127 aagtatcggataattattttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgcatgatac 225  Q
    ||||||||||||||||||||         |||||||||||||||||||||||| ||||||| |||||||||||||||  ||||||||| |||| |||||    
T  43357734 aagtatcggataattattttttaaaaaaataaaatttaatcttcggatactcttttaatacgtatcggaaagtatcagacaggtatcggtgcaggatac 43357832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 18 - 226
Target Start/End: Original strand, 18001831 - 18002036
Alignment:
Q  18 aacacatcagtactcaaaacttaagttattttagttaacattaattggaagtatcggggaagatatcaatgcaggataattatcgcatactatcctgata 117  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||  | ||| || | || ||||  |||| ||||||||||| ||||| || |||||    
T  18001831 aacacatcagtactcaataattaagttattttagttaacattaattgagaatattggagcaggtatcggtgcatgataattatcggatactctcttgata 18001930  T
Q  118 tgtatcagaaagtatcggataattattttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatg 217  Q
     ||||| ||||||||| ||||||||||||         |||||||||||||||  |||||||| | |||  |||||| ||||   |||||||||||||||    
T  18001931 cgtatcggaaagtatcagataattatttttaaaaaaaataaaatttaatcttcaaatactctcctgatatgtatcgggaagt---atgcaggtatcgatg 18002027  T
Q  218 catgatacg 226  Q
    || ||||||    
T  18002028 caggatacg 18002036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 28 - 145
Target Start/End: Complemental strand, 25749849 - 25749731
Alignment:
Q  28 tactcaaaacttaagttattttagttaacattaattgg-aagtatcggggaagatatcaatgcaggataattatcgcatactatcctgatatgtatcaga 126  Q
    ||||||||| ||||||||||||| |||||||||||||| |||||| |||| || |||   |||||||||||||||| ||||| |||||||| ||||| ||    
T  25749849 tactcaaaagttaagttattttaattaacattaattgggaagtattggggcaggtattggtgcaggataattatcggatactctcctgatacgtatcgga 25749750  T
Q  127 aagtatcggataattattt 145  Q
    ||||||| |||||||||||    
T  25749749 aagtatcagataattattt 25749731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 146
Target Start/End: Complemental strand, 22738091 - 22737963
Alignment:
Q  18 aacacatcagtactcaaaacttaagttattttagttaacattaattg-gaagtatcggggaagatatcaatgcaggataattatcgcatactatcctgat 116  Q
    ||||||||||| ||||| | |||| |||||||||||||||||||||| ||||||||| || || ||||| |||||||||||||||  ||||| | |||||    
T  22738091 aacacatcagtgctcaagagttaaattattttagttaacattaattgagaagtatcgaggcaggtatcagtgcaggataattatcagatactcttctgat 22737992  T
Q  117 atgtatcagaaagtatcggataattatttt 146  Q
    | |||||||||| |||| ||||||||||||    
T  22737991 acgtatcagaaattatc-gataattatttt 22737963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 87 - 256
Target Start/End: Complemental strand, 1795576 - 1795406
Alignment:
Q  87 tgcaggataattatcgcatactatcctgatatgtatcagaaagtatcggataattattttnnnnnnnnn-taaaatttaatcttcggatactctcttaat 185  Q
    |||||||||||||||| ||||| | |||||| ||||| | ||||||||||||||||||||          ||||||||||||||||||||||||  | ||    
T  1795576 tgcaggataattatcggatacttttctgatacgtatcgggaagtatcggataattatttttaaaaaaaaataaaatttaatcttcggatactcttctgat 1795477  T
Q  186 acatatcggaaagtatcatgcaggtatcgatgcatgatacgcagaagatacaatacatcatccattttgaa 256  Q
    || ||||||||||||||  |||||||||| |||| |||||| ||  ||||| |||| ||| ||||||||||    
T  1795476 acgtatcggaaagtatcgggcaggtatcggtgcaggatacggaggggatacgatacgtcaaccattttgaa 1795406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 172 - 256
Target Start/End: Original strand, 35746271 - 35746355
Alignment:
Q  172 gatactctcttaatacatatcggaaagtatcatgcaggtatcgatgcatgatacgcagaagatacaatacatcatccattttgaa 256  Q
    ||||||||| | |||| ||||||||||||| | |||||||||||||||||||||| || ||||||||||| ||||| ||||||||    
T  35746271 gatactctcctgatacgtatcggaaagtattaggcaggtatcgatgcatgatacgtaggagatacaatacgtcatctattttgaa 35746355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 38 - 179
Target Start/End: Complemental strand, 27938392 - 27938250
Alignment:
Q  38 ttaagttattttagttaacattaattg-gaagtatcggggaagatatcaatgcaggataattatcgcatactatcctgatatgtatcagaaagtatcgga 136  Q
    ||||||||||||| |||| |||||||| |||||||  ||| ||||||   || ||||||||||||| ||||| |||||||| ||||  | ||||||||||    
T  27938392 ttaagttattttaattaatattaattgagaagtattagggtagatattggtgtaggataattatcggatactctcctgatacgtattgggaagtatcgga 27938293  T
Q  137 taattattttnnnnnnnnntaaaatttaatcttcggatactct 179  Q
    ||||||||||         ||||||||||||||||||||||||    
T  27938292 taattattttttaaaaaaataaaatttaatcttcggatactct 27938250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 256
Target Start/End: Complemental strand, 34032615 - 34032383
Alignment:
Q  18 aacacatcagtactcaaaacttaagttattttagttaacattaat--tggaag-tatcggggaagatatcaatgcaggataattatcgcatactatcctg 114  Q
    ||||||| ||||||||||| |||| ||||||||||||||||||||  |||||  |||||||| || |||| |||||| |||||||||| |||||          
T  34032615 aacacattagtactcaaaagttaaattattttagttaacattaatattggaaaatatcggggtaggtatcgatgcagaataattatcggatactc----- 34032521  T
Q  115 atatgtatcagaaagtatcggataattattttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcg 214  Q
        ||||  | ||||||| ||||||||||||         ||||| ||||||||||||||||||| | |||| |||||| |||||||| ||||||||||    
T  34032520 ----gtattgggaagtatcagataattatttttttaaaaaataaaaattaatcttcggatactctcctgatacgtatcgggaagtatcaagcaggtatcg 34032425  T
Q  215 atgcatgatacgcagaagatacaatacatcatccattttgaa 256  Q
     |  ||||||||||   ||| | |||||||||| ||||||||    
T  34032424 gtagatgatacgcaagggattcgatacatcatctattttgaa 34032383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 158 - 228
Target Start/End: Complemental strand, 1920948 - 1920878
Alignment:
Q  158 aaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgcatgatacgca 228  Q
    |||||||||||||||||||||||  ||||| |||||| ||||||||||||| ||||| |||||||||||||    
T  1920948 aaatttaatcttcggatactctcccaatacgtatcgggaagtatcatgcagatatcggtgcatgatacgca 1920878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 18 - 122
Target Start/End: Complemental strand, 27085602 - 27085497
Alignment:
Q  18 aacacatcagtactcaaaacttaagttattttagttaacattaattgg-aagtatcggggaagatatcaatgcaggataattatcgcatactatcctgat 116  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||| || |||||||| || ||||  | |||||||||||||  ||||| | |||||    
T  27085602 aacacatcagtactcaagagttaagttattttagttaacattaattggcaaatatcgggggagctatcggttcaggataattatcagatactcttctgat 27085503  T
Q  117 atgtat 122  Q
    | ||||    
T  27085502 acgtat 27085497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 156 - 256
Target Start/End: Original strand, 32728713 - 32728813
Alignment:
Q  156 taaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgcatgatacgcagaagatacaatacatcatccattttga 255  Q
    |||||| |||| || ||||||||||   |||| |||||| |||||||  ||||||||||||||| |||||||||  |||||||||||||||| |||||||    
T  32728713 taaaatctaatatttggatactctccggatacgtatcgggaagtatcgggcaggtatcgatgcaagatacgcaggggatacaatacatcatcaattttga 32728812  T
Q  256 a 256  Q
    |    
T  32728813 a 32728813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 120 - 257
Target Start/End: Complemental strand, 32625027 - 32624890
Alignment:
Q  120 tatcagaaagtatcggataattattttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgca 219  Q
    |||| ||||||||||||||||||||||         ||||||||||| || |||||||||   ||||| |||||| |||||||  |||||||||||||||    
T  32625027 tatcggaaagtatcggataattattttttaaaaaaataaaatttaatatttggatactcttcgaatacgtatcgggaagtatcgggcaggtatcgatgca 32624928  T
Q  220 tgatacgcagaagatacaatacatcatccattttgaaa 257  Q
     ||||| |||  |||||  ||| |||||||||||||||    
T  32624927 agatacacaggggatacggtacgtcatccattttgaaa 32624890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 28 - 145
Target Start/End: Original strand, 42365982 - 42366100
Alignment:
Q  28 tactcaaaacttaagttattttagttaacattaattgg-aagtatcggggaagatatcaatgcaggataattatcgcatactatcctgatatgtatcaga 126  Q
    ||||||||| ||||||||||| |||||||||||||||| ||||||   || || || |  |||||||||||||||| ||||| ||||||||  |||| |     
T  42365982 tactcaaaagttaagttatttcagttaacattaattgggaagtatttaggcaggtaacggtgcaggataattatcggatactctcctgatacatatcggg 42366081  T
Q  127 aagtatcggataattattt 145  Q
    |||||| ||||||||||||    
T  42366082 aagtattggataattattt 42366100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 156 - 225
Target Start/End: Complemental strand, 27085478 - 27085409
Alignment:
Q  156 taaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgcatgatac 225  Q
    ||||||||||| | ||||||||||||| |||| |||||||||||||||||||| ||||| | ||||||||    
T  27085478 taaaatttaatttccggatactctcttgatacgtatcggaaagtatcatgcagatatcggtacatgatac 27085409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 172 - 256
Target Start/End: Complemental strand, 30918476 - 30918392
Alignment:
Q  172 gatactctcttaatacatatcggaaagtatcatgcaggtatcgatgcatgatacgcagaagatacaatacatcatccattttgaa 256  Q
    |||||||||  ||||| |||||| |||||||  |||||||||| |||| |||||||||  |||||||||| ||||||||||||||    
T  30918476 gatactctccgaatacgtatcgggaagtatcgggcaggtatcggtgcaggatacgcaggggatacaatacgtcatccattttgaa 30918392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 117 - 256
Target Start/End: Original strand, 39690728 - 39690867
Alignment:
Q  117 atgtatcagaaagtatcggataattattttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgat 216  Q
    ||||||| ||||||||||||||||||||||         ||||||||||| || ||||||||||   |||| |||| | |||||||  |||||||||| |    
T  39690728 atgtatcggaaagtatcggataattattttttaaaaaaataaaatttaatatttggatactctccggatacgtatcaggaagtatcgggcaggtatcggt 39690827  T
Q  217 gcatgatacgcagaagatacaatacatcatccattttgaa 256  Q
    ||| |||||||||  |||||  ||| ||||||||||||||    
T  39690828 gcaggatacgcaggggatacggtacgtcatccattttgaa 39690867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 119 - 256
Target Start/End: Original strand, 32707798 - 32707935
Alignment:
Q  119 gtatcagaaagtatcggataattattttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgc 218  Q
    ||||| ||||||||| ||||||||||||         ||||||||||| || ||||||||||   |||| |||||| |||||||  |||||||||| |||    
T  32707798 gtatcggaaagtatcagataattattttttaaaaaaataaaatttaatatttggatactctccggatacgtatcgggaagtatcgggcaggtatcggtgc 32707897  T
Q  219 atgatacgcagaagatacaatacatcatccattttgaa 256  Q
    | |||||||||  |||||  ||| ||||||||||||||    
T  32707898 aggatacgcaggggatacggtacgtcatccattttgaa 32707935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 156 - 253
Target Start/End: Complemental strand, 9792433 - 9792336
Alignment:
Q  156 taaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgcatgatacgcagaagatacaatacatcatccatttt 253  Q
    ||||||||||| || |||||||||||  |||| |||||| |||||||  ||||||||||||||| ||||| |||  |||||  ||| |||||||||||    
T  9792433 taaaatttaatatttggatactctctggatacgtatcgggaagtatcgggcaggtatcgatgcaggatacacaggggatacggtacgtcatccatttt 9792336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 132
Target Start/End: Original strand, 35746196 - 35746300
Alignment:
Q  28 tactcaaaacttaagttattttagttaacattaattgg-aagtatcggggaagatatcaatgcaggataattatcgcatactatcctgatatgtatcaga 126  Q
    ||||||| | ||||||||||||| |||||||||||||| |||||| ||  | | ||||| |||||||||||||||  ||||| |||||||| ||||| ||    
T  35746196 tactcaagagttaagttattttacttaacattaattgggaagtattggacatg-tatcagtgcaggataattatcagatactctcctgatacgtatcgga 35746294  T
Q  127 aagtat 132  Q
    ||||||    
T  35746295 aagtat 35746300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 156 - 256
Target Start/End: Original strand, 1639786 - 1639886
Alignment:
Q  156 taaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgcatgatacgcagaagatacaatacatcatccattttga 255  Q
    ||||||||||| || |||||||||    |||| |||||| |||||||  |||||||||| |||| |||||||||  |||||| ||| |||||||||||||    
T  1639786 taaaatttaatatttggatactcttcggatacgtatcgggaagtatcgggcaggtatcggtgcaggatacgcaggggatacagtacgtcatccattttga 1639885  T
Q  256 a 256  Q
    |    
T  1639886 a 1639886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 156 - 256
Target Start/End: Complemental strand, 11906332 - 11906232
Alignment:
Q  156 taaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgcatgatacgcagaagatacaatacatcatccattttga 255  Q
    ||||||||||| |||||||||||||   |||| |||||| |||||||   ||| ||||| |||| |||||||||   ||||||||| |||||||||||||    
T  11906332 taaaatttaatattcggatactctccggatacgtatcgggaagtatcggacagatatcggtgcaggatacgcagggaatacaatacgtcatccattttga 11906233  T
Q  256 a 256  Q
    |    
T  11906232 a 11906232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 156 - 256
Target Start/End: Original strand, 30777526 - 30777626
Alignment:
Q  156 taaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgcatgatacgcagaagatacaatacatcatccattttga 255  Q
    ||||||||||| || ||||||||||   |||| |||||| |||||||  |||||||||| |||| ||||||||   ||||| |||| |||||||||||||    
T  30777526 taaaatttaatatttggatactctccggatacgtatcgggaagtatcgggcaggtatcggtgcaggatacgcaagggatacgatacgtcatccattttga 30777625  T
Q  256 a 256  Q
    |    
T  30777626 a 30777626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 117 - 256
Target Start/End: Complemental strand, 33829902 - 33829767
Alignment:
Q  117 atgtatcagaaagtatcggataattattttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgat 216  Q
    |||||||||||||||||||||||||||||           |||||||||| || ||||||||||   |||| |||||| |||||||| ||| |||||| |    
T  33829902 atgtatcagaaagtatcggataattatttaaaaaaa----aaaatttaatatttggatactctccggatacgtatcgggaagtatcaggcatgtatcggt 33829807  T
Q  217 gcatgatacgcagaagatacaatacatcatccattttgaa 256  Q
    ||| |||||||||  |||||  ||| ||||||||||||||    
T  33829806 gcaggatacgcaggggatacggtacgtcatccattttgaa 33829767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 156 - 256
Target Start/End: Original strand, 41392716 - 41392816
Alignment:
Q  156 taaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgcatgatacgcagaagatacaatacatcatccattttga 255  Q
    ||||||||||| || |||||||| |   ||||||||||| |||||||  |||||||||| |||| |||||||||  |||||  ||| |||||||||||||    
T  41392716 taaaatttaatatttggatactccccggatacatatcgggaagtatcgggcaggtatcggtgcaggatacgcaggggatacggtacgtcatccattttga 41392815  T
Q  256 a 256  Q
    |    
T  41392816 a 41392816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 65
Target Start/End: Complemental strand, 41233559 - 41233512
Alignment:
Q  18 aacacatcagtactcaaaacttaagttattttagttaacattaattgg 65  Q
    ||||||| ||||||||| | ||||||||||||||||||||||||||||    
T  41233559 aacacattagtactcaacagttaagttattttagttaacattaattgg 41233512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 126
Target Start/End: Complemental strand, 5722230 - 5722121
Alignment:
Q  18 aacacatcagtactcaaaacttaagttattttagttaacattaatt-ggaagtatcggggaagatatcaatgcaggataattatcgcatactatcctgat 116  Q
    ||||||| ||||||||| | ||||||| ||||||| |||||||||| |||| |||||||| |  |||   || ||||||||||||| ||||| | |||||    
T  5722230 aacacataagtactcaagagttaagtttttttagtcaacattaattgggaaatatcggggcaagtatttgtgtaggataattatcgaatactcttctgat 5722131  T
Q  117 atgtatcaga 126  Q
    | ||||||||    
T  5722130 aagtatcaga 5722121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 145
Target Start/End: Complemental strand, 11694454 - 11694328
Alignment:
Q  18 aacacatcagtactcaaaacttaagttattttagttaacattaattgg-aagtatcggggaagatatcaatgcaggataattatcgcatactatcctgat 116  Q
    |||||||||||||| || | ||||||||||||| |||||||||||||| || ||| |||| || || |  |||||||||||||||  ||| | || ||||    
T  11694454 aacacatcagtact-aagagttaagttatttta-ttaacattaattgggaactattggggcaggtagcggtgcaggataattatcagatattctcttgat 11694357  T
Q  117 atgtatcagaaagtatcggataattattt 145  Q
    | ||||| | ||||||| |||||||||||    
T  11694356 acgtatcgggaagtatcagataattattt 11694328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 209 - 256
Target Start/End: Original strand, 6243215 - 6243262
Alignment:
Q  209 gtatcgatgcatgatacgcagaagatacaatacatcatccattttgaa 256  Q
    |||||| |||| |||||||||| |||||||||| ||||||||||||||    
T  6243215 gtatcggtgcaggatacgcagaggatacaatacgtcatccattttgaa 6243262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 157 - 256
Target Start/End: Complemental strand, 14836494 - 14836395
Alignment:
Q  157 aaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgcatgatacgcagaagatacaatacatcatccattttgaa 256  Q
    |||| ||||| ||||||||||||  | |||| ||||||||| ||||   ||  |||||||||| |||||||||  |||||||||| ||| ||||||||||    
T  14836494 aaaaattaatattcggatactcttctgatacgtatcggaaaatatcggacaaatatcgatgcaggatacgcaggggatacaatacgtcaaccattttgaa 14836395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 209 - 256
Target Start/End: Complemental strand, 27938224 - 27938177
Alignment:
Q  209 gtatcgatgcatgatacgcagaagatacaatacatcatccattttgaa 256  Q
    |||||| |||||||||||||  ||||||||||| ||||||||||||||    
T  27938224 gtatcggtgcatgatacgcatgagatacaatacgtcatccattttgaa 27938177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 156 - 229
Target Start/End: Complemental strand, 3701312 - 3701239
Alignment:
Q  156 taaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgcatgatacgcag 229  Q
    ||||||||||||||| ||||||||| | | ||||||| | ||||||||  ||| ||||| |||| |||||||||    
T  3701312 taaaatttaatcttcagatactctcctgaaacatatcaggaagtatcagacagatatcggtgcaggatacgcag 3701239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 156 - 241
Target Start/End: Original strand, 5986072 - 5986157
Alignment:
Q  156 taaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgcatgatacgcagaagatacaatac 241  Q
    ||||||||||| || ||||||||||  ||||| |||| |||||||||   ||  |||||||||| ||||||||| |||||| ||||    
T  5986072 taaaatttaatatttggatactctcccaatacgtatcagaaagtatcggacatatatcgatgcaggatacgcaggagataccatac 5986157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 21 - 62
Target Start/End: Complemental strand, 11907541 - 11907500
Alignment:
Q  21 acatcagtactcaaaacttaagttattttagttaacattaat 62  Q
    |||||||||||||  | |||||||||||||||||||||||||    
T  11907541 acatcagtactcaggagttaagttattttagttaacattaat 11907500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 158 - 203
Target Start/End: Complemental strand, 21251577 - 21251532
Alignment:
Q  158 aaatttaatcttcggatactctcttaatacatatcggaaagtatca 203  Q
    ||||||||| ||||||||||||| | |||| |||||||||||||||    
T  21251577 aaatttaatattcggatactctcctgatacgtatcggaaagtatca 21251532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 172 - 256
Target Start/End: Complemental strand, 41233477 - 41233393
Alignment:
Q  172 gatactctcttaatacatatcggaaagtatcatgcaggtatcgatgcatgatacgcagaagatacaatacatcatccattttgaa 256  Q
    ||||||||| | |||| |||||| ||||||||  || |||||| |||| |||||| || | |||| |||| ||||||||||||||    
T  41233477 gatactctcctgatacgtatcgggaagtatcagacatgtatcgttgcaggatacgtaggaaatacgatacgtcatccattttgaa 41233393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 118; Significance: 3e-60; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 16 - 256
Target Start/End: Original strand, 55268879 - 55269116
Alignment:
Q  16 ataacacatcagtactcaaaacttaagttattttagttaacattaattgg-aagtatcggggaagatatcaatgcaggataattatcgcatactatcctg 114  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||  || ||||||||||||||||||||||||| |||||||||||    
T  55268879 ataacacatcagtactcaagacttaagttattttagttaacattaattgggaagtatcatggcagatatcaatgcaggataattatcggatactatcctg 55268978  T
Q  115 atatgtatcagaaagtatcggataattattttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcg 214  Q
    ||  ||||| | ||||||||||||||||||||         ||||||||||||||||||||||||| | |||| |||||| ||||||    |||||||||    
T  55268979 atgcgtatcgggaagtatcggataattattttttaaaaaaataaaatttaatcttcggatactctcctgatacgtatcgggaagtat----caggtatcg 55269074  T
Q  215 atgcatgatacgcagaagatacaatacatcatccattttgaa 256  Q
    ||||| |||||||||  ||||| |||| ||||||||||||||    
T  55269075 atgcaggatacgcaggggatacgatacgtcatccattttgaa 55269116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 18 - 251
Target Start/End: Complemental strand, 25701014 - 25700779
Alignment:
Q  18 aacacatcagtactcaaaacttaagttattttagttaacattaattgg-aagtatcggggaagatatcaatgcaggataattatcgcatactatcctgat 116  Q
    ||||||| ||||||||| | ||||||||||||||| |||||||||||| ||||||||||| ||| |||| |||||||||||||||| ||||| |||||||    
T  25701014 aacacataagtactcaagagttaagttattttagtaaacattaattgggaagtatcggggcagacatcagtgcaggataattatcggatactctcctgat 25700915  T
Q  117 atgtatcagaaagtatcggataattatttt-nnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcga 215  Q
    | ||||| | ||||||||||||||||||||          ||||||||||||||||||||||||| | |||| |||  | |||||||| ||||||||||     
T  25700914 acgtatcgggaagtatcggataattattttaaaaataaaataaaatttaatcttcggatactctcctgatacgtattaggaagtatcaggcaggtatcgg 25700815  T
Q  216 tgcatgatacgcagaagatacaatacatcatccatt 251  Q
    |||| |||||||||| ||||||||| ||||||||||    
T  25700814 tgcaggatacgcagaggatacaatatatcatccatt 25700779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 18 - 256
Target Start/End: Original strand, 6134247 - 6134486
Alignment:
Q  18 aacacatcagtactcaaaacttaagttattttagttaacattaattgg-aagtatcggggaagatatcaatgcaggataattatcgcatactatcctgat 116  Q
    ||||||||||||||||| | ||||||||||||||| |||||||||||| || || | ||| |  |||| ||||||||||||||||| ||||| |||||||    
T  6134247 aacacatcagtactcaagagttaagttattttagtcaacattaattgggaaataacagggcatgtatcgatgcaggataattatcgaatactctcctgat 6134346  T
Q  117 atgtatcagaaagtatcggataattattttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgat 216  Q
    |  |||| | ||||||||||||||||||||         ||| ||||||||||||||||||||| | ||||||||||| |||||||| | | |||||| |    
T  6134347 aaatatcgggaagtatcggataattatttttttaaaaaataatatttaatcttcggatactctcctgatacatatcgggaagtatcaggtatgtatcggt 6134446  T
Q  217 gcatgatacgcagaagatacaatacatcatccattttgaa 256  Q
    ||| |||||||||  ||||| |||| ||||||||||||||    
T  6134447 gcaggatacgcaggggatacgatacgtcatccattttgaa 6134486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 16 - 256
Target Start/End: Original strand, 30787424 - 30787666
Alignment:
Q  16 ataacacatcagtactcaaaacttaagttattttagttaacattaattgg-aagtatcggggaagatatcaatgcaggataattatcgcatactatcctg 114  Q
    ||||||||||||||||||| | |||||||||||||||||||||||||||| ||||||||||| |||||||| |||| ||||||||||| ||||| |||||    
T  30787424 ataacacatcagtactcaagagttaagttattttagttaacattaattgggaagtatcggggcagatatcagtgcatgataattatcggatactctcctg 30787523  T
Q  115 atatgtatcagaaagtatcggataattatt-ttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatc 213  Q
    ||||||||| | |||||| ||||||||||| ||         ||||||||||||||||||||||||| | |||| |||||  |||| |||  || |||||    
T  30787524 atatgtatcgggaagtataggataattattatttttttaaaataaaatttaatcttcggatactctcctgatacgtatcgagaagtgtcaaacaagtatc 30787623  T
Q  214 gatgcatgatacgcagaagatacaatacatcatccattttgaa 256  Q
      | || |||||||||  ||||| |||| ||||| ||||||||    
T  30787624 agtacaggatacgcaggggatacgatacgtcatcgattttgaa 30787666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 28 - 256
Target Start/End: Original strand, 41741947 - 41742176
Alignment:
Q  28 tactcaaaacttaagttattttagttaacattaattgg-aagtatcggggaagatatcaatgcaggataattatcgcatactatcctgatatgtatcaga 126  Q
    ||||||| | ||||||||||||| |||||||||||||| |||||| |||| |  ||||| |||||||||||||||| ||||| |||||||| ||||| |     
T  41741947 tactcaagagttaagttattttacttaacattaattgggaagtattggggcatgtatcagtgcaggataattatcggatactctcctgatacgtatcggg 41742046  T
Q  127 aagtatcggataattattttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgcatgatacg 226  Q
    ||||| ||||||||||||||         |||||||||||||||||||||||||   |||  |||||| |||||||| | |||||||| |||| |||||     
T  41742047 aagtaccggataattattttttttaaaaataaaatttaatcttcggatactctccagatatgtatcgggaagtatcaggaaggtatcggtgcaggataca 41742146  T
Q  227 cagaagatacaatacatcatccattttgaa 256  Q
    |||| |||||||||| ||||||||||||||    
T  41742147 cagaggatacaatacgtcatccattttgaa 41742176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 18 - 256
Target Start/End: Complemental strand, 28968764 - 28968524
Alignment:
Q  18 aacacatcagtactcaaaacttaagttattttagttaacattaatt-ggaagtatcggggaagatatcaatgcaggataattatcgca-tactatcctga 115  Q
    ||||||||| ||||||| | |||||||||||||||||||||||||| ||||||||||||| ||||| | ||| |||||||| |||| | |||| ||||||    
T  28968764 aacacatcattactcaagagttaagttattttagttaacattaattgggaagtatcggggcagataccgatgtaggataatgatcggattactctcctga 28968665  T
Q  116 tatgtatcagaaagtatcggataattattttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcga 215  Q
    || ||||| | ||||||||||||||||||||         ||||||||||||||||||||||||  | |||| |||||| |||||||  ||||||||||     
T  28968664 tacgtatcgggaagtatcggataattattttttttaaaaataaaatttaatcttcggatactcttctgatacgtatcgggaagtatcgggcaggtatcgg 28968565  T
Q  216 tgcatgatacgcagaagatacaatacatcatccattttgaa 256  Q
    |||| |||||| | | ||||   ||| ||||||||||||||    
T  28968564 tgcaggatacgtaaaggatatggtacgtcatccattttgaa 28968524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 32 - 256
Target Start/End: Original strand, 22289600 - 22289825
Alignment:
Q  32 caaaacttaagttattttagttaacattaattgg-aagtatcggggaagatatcaatgcaggataattatcgcatactatcctgatatgtatcagaaagt 130  Q
    ||||| |||||||||||||||||||||||||||| ||||||  ||| || ||||  | || ||||||||||  ||||| |||||||| |||| |||||||    
T  22289600 caaaagttaagttattttagttaacattaattgggaagtattagggcaggtatcggtacatgataattatcagatactctcctgatacgtattagaaagt 22289699  T
Q  131 atcggataattattttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgcatgatacgcaga 230  Q
    ||| ||| ||||||||         ||||||||||||||||||||||||| | |||| |||| | ||||||||||||||||| | |||| |||||||||     
T  22289700 atcagatgattattttttaaagaaataaaatttaatcttcggatactctcctgatacgtatcaggaagtatcatgcaggtattggtgcaggatacgcagg 22289799  T
Q  231 agatacaatacatcatccattttgaa 256  Q
     ||||| |||| ||||||||||||||    
T  22289800 ggatacgatacgtcatccattttgaa 22289825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 18 - 256
Target Start/End: Original strand, 21157594 - 21157833
Alignment:
Q  18 aacacatcagtactcaaaacttaagttattttagttaacattaattgg-aagtatcggggaagatatcaatgcaggataattatcgcatactatcctgat 116  Q
    ||||||||| ||||| | | ||||||||||||| |||||||||||||| || |||||||| || || |  |||||||||||||||  ||||| |||||||    
T  21157594 aacacatcaatactcgagagttaagttattttaattaacattaattgggaactatcggggcaggtagcggtgcaggataattatcagatactctcctgat 21157693  T
Q  117 atgtatcagaaagtatcggataattattttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgat 216  Q
    | ||||||| ||||||||||||||||||||         ||||||||||||||||||||||||| |  ||| |||| |||||||||  |||| |||| ||    
T  21157694 acgtatcaggaagtatcggataattattttttaaaaaaataaaatttaatcttcggatactctcctggtacgtatcagaaagtatcgggcagttatcaat 21157793  T
Q  217 gcatgatacgcagaagatacaatacatcatccattttgaa 256  Q
    ||| ||| | ||||  |||| |||| ||||||||||||||    
T  21157794 gcaggatgcacagagaatacgatacgtcatccattttgaa 21157833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 18 - 256
Target Start/End: Original strand, 7899583 - 7899823
Alignment:
Q  18 aacacatcagtactcaaaacttaagttattttagttaacattaatt-ggaagtatcggggaagatatcaatgcaggataattatcgcatactatcctgat 116  Q
    ||||||||||||||||| | |||||||||||||||||||||||||| ||||||||||||| |||||||| |  |||||||| |||  ||||| ||| |||    
T  7899583 aacacatcagtactcaagagttaagttattttagttaacattaattgggaagtatcggggcagatatcagtataggataatgatcagatactctcccgat 7899682  T
Q  117 atgtatcagaaagtatcggataatta-ttttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcga 215  Q
    | ||||| | |||||||||||||||| ||||         ||||||||||||||||||||||||  | |||| |||||| || ||||| |||| ||| |     
T  7899683 acgtatcgggaagtatcggataattatttttgtaaaaaaataaaatttaatcttcggatactcttctgatacgtatcgggaaatatcaagcagatatagg 7899782  T
Q  216 tgcatgatacgcagaagatacaatacatcatccattttgaa 256  Q
    |||| |||||| |  ||||||| | | ||||||||||||||    
T  7899783 tgcaggatacgtaagagatacatttcgtcatccattttgaa 7899823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 21 - 256
Target Start/End: Original strand, 20510024 - 20510260
Alignment:
Q  21 acatcagtactcaaaacttaagttattttagttaacattaattgg-aagtatcggggaagatatcaatgcaggataattatcgcatactatcctgatatg 119  Q
    |||||| || |||| | ||||||||||||||| |||||||||||| || ||| |||| || |||| ||||||||||||||||| ||||| | |||||| |    
T  20510024 acatcactattcaagagttaagttattttagtcaacattaattgggaaatattggggcaggtatcgatgcaggataattatcgaatacttttctgataag 20510123  T
Q  120 tatcagaaagtatcggataattattttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgca 219  Q
    |||| | ||||||| ||||||||||||         ||||||||||||||| |||| |||||| |||| ||| |||||||||||  ||||||||| | ||    
T  20510124 tatcgggaagtatcagataattattttttttaaaaataaaatttaatcttcagatattctcttgatacgtattggaaagtatcaaacaggtatcggtaca 20510223  T
Q  220 tgatacgcagaagatacaatacatcatccattttgaa 256  Q
     ||||||||   ||||| || | ||||||||||||||    
T  20510224 agatacgcacgggatacgatgcgtcatccattttgaa 20510260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 18 - 179
Target Start/End: Complemental strand, 47642259 - 47642097
Alignment:
Q  18 aacacatcagtactcaaaacttaagttattttagttaacattaattgg-aagtatcggggaagatatcaatgcaggataattatcgcatactatcctgat 116  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||| ||||||||||| |||||    || |||||||| |||| ||||| |||||||    
T  47642259 aacacatcagtactcaagagttaagttattttagttaacattaattggaaagtatcggggcagatacttgtgtaggataatgatcggatactctcctgat 47642160  T
Q  117 atgtatcagaaagtatcggataattattttnnnnnnnnntaaaatttaatcttcggatactct 179  Q
    | ||||| | ||||||| ||||||||||||         ||||||||||||||||||||||||    
T  47642159 acgtatcgggaagtatcagataattatttttttataaaataaaatttaatcttcggatactct 47642097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 21 - 219
Target Start/End: Complemental strand, 19421666 - 19421467
Alignment:
Q  21 acatcagtactcaaaacttaagttattttagttaacattaatt-ggaagtatcggggaagatatcaatgcaggataattatcgcatactatcctgatatg 119  Q
    |||||||| ||||| | |||||||||||| ||||||||||||| |||| |||| ||| || ||||  |||||||||||||||  ||||  |||||||| |    
T  19421666 acatcagtgctcaagagttaagttattttggttaacattaattgggaaatatcagggcaggtatcggtgcaggataattatcatatacgctcctgatacg 19421567  T
Q  120 tatcagaaagtatcggataattattttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgca 219  Q
    |||| | |||||||||||||||| |||         ||||||||||||||||||||||||| | |||| |||||| ||||||||  ||||||||| ||||    
T  19421566 tatcgggaagtatcggataattactttttaaaaaaataaaatttaatcttcggatactctcctgatacgtatcgggaagtatcagacaggtatcggtgca 19421467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 18 - 256
Target Start/End: Original strand, 38888951 - 38889183
Alignment:
Q  18 aacacatcagtactcaaaacttaagttattttagttaacattaattg-gaagtatcggggaagatatcaatgcaggataattatcgcatactatcctgat 116  Q
    |||||| |||||||||| | ||||||||||||||||||||||||||| ||| |||||||| || ||| |  ||||||||||||||| ||||| |||||||    
T  38888951 aacacaccagtactcaagagttaagttattttagttaacattaattgagaaatatcggggcaggtattagagcaggataattatcggatactctcctgat 38889050  T
Q  117 atgtatcagaaagtatcggataattattttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgat 216  Q
    | | ||| | |||||||  |||||||||||          |||| |||||||||| |||||||| | |||| ||||||||| ||||| |||| ||||| |    
T  38889051 acgcatcgggaagtatcaaataattatttttaaa------aaaaattaatcttcgaatactctcctgatacgtatcggaaattatcaggcagatatcggt 38889144  T
Q  217 gcatgatacgcagaagatacaatacatcatccattttgaa 256  Q
    ||| ||| || ||| ||||| |||| ||||||||||||||    
T  38889145 gcaggat-cgtagaggatacgatacgtcatccattttgaa 38889183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 18 - 194
Target Start/End: Original strand, 19878967 - 19879145
Alignment:
Q  18 aacacatcagtactcaaaacttaagttattttagttaacattaatt-ggaagtatc-ggggaagatatcaatgcaggataattatcgcatactatcctga 115  Q
    ||||||||||||||||| | |||||||||||||||||||||||||| |||| |||| |||| ||  | |  |||||||||||||||| ||||| || |||    
T  19878967 aacacatcagtactcaagagttaagttattttagttaacattaattgggaactatcgggggcaggcagcggtgcaggataattatcgaatactctcatga 19879066  T
Q  116 tatgtatcagaaagtatcggataattattttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcgg 194  Q
    || ||||| | ||||||||||||||||||||         ||||||| ||||||||||||||||| | |||||||||||    
T  19879067 tacgtatcgggaagtatcggataattatttttttaaaaaataaaattgaatcttcggatactctccttatacatatcgg 19879145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 28 - 256
Target Start/End: Complemental strand, 2122952 - 2122718
Alignment:
Q  28 tactcaaaacttaagttattttagttaacattaattggaa-gtatcggggaagatatcaatgcaggataattatcgcatactatcctgatatgtatcaga 126  Q
    ||||||| | |||||||||||||||||||||||||||||| |||| | || || || || |||||||||||||||| ||| | | |||||| |||||       
T  2122952 tactcaagagttaagttattttagttaacattaattggaaagtattgaggcaggtaccagtgcaggataattatcggatagtctactgatacgtatcgcg 2122853  T
Q  127 aagtatcggataattattttnnnnnnnnn--taaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgcatgata 224  Q
    ||||||| ||||||| ||||           ||||||||||||||||||| ||||| | |||| |||||| |||||||| ||| |||||| |||||||||    
T  2122852 aagtatcagataattctttttttttttaaaataaaatttaatcttcggattctctcctgatacgtatcgggaagtatcaggcaagtatcggtgcatgata 2122753  T
Q  225 cgcagaa---gatacaatacatcatccattttgaa 256  Q
    ||||| |   |||||||||| ||||||||||||||    
T  2122752 cgcaggaggggatacaatacgtcatccattttgaa 2122718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 28 - 256
Target Start/End: Original strand, 13748323 - 13748551
Alignment:
Q  28 tactcaaaacttaagttattttagttaacattaattggaagt-atcggggaagatatcaatgcaggataattatcgcatactatcctgatatgtatcaga 126  Q
    ||||||| | |||| |||||||| ||||| |||||||||| | || |||| || |||   | || ||||||||||| ||||| | |||||| ||||| |     
T  13748323 tactcaagagttaaattattttatttaacgttaattggaaattattggggcaggtataggtacatgataattatcggatacttttctgatacgtatcggg 13748422  T
Q  127 aagtatcggataattattttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgcatgatacg 226  Q
    ||||||| ||||||||||||         ||||||||||||||||||||||||  | |||| ||||||||||||||  |||||||||| |||| ||||||    
T  13748423 aagtatcagataattattttaaaaaaaa-taaaatttaatcttcggatactcttctgatacgtatcggaaagtatcgggcaggtatcggtgcaggatacg 13748521  T
Q  227 cagaagatacaatacatcatccattttgaa 256  Q
    |||| ||||| |||| ||| ||||||||||    
T  13748522 cagaggatacgatacgtcaaccattttgaa 13748551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 156 - 256
Target Start/End: Complemental strand, 30226534 - 30226434
Alignment:
Q  156 taaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgcatgatacgcagaagatacaatacatcatccattttga 255  Q
    ||||||||||||||||||||||||||| |||| |||| |||||||||  |||||||||| |||| |||||||||| ||||| |||  |||||||||||||    
T  30226534 taaaatttaatcttcggatactctcttgatacgtatcagaaagtatcgggcaggtatcggtgcaggatacgcagaggatacgataagtcatccattttga 30226435  T
Q  256 a 256  Q
    |    
T  30226434 a 30226434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 18 - 194
Target Start/End: Original strand, 13353060 - 13353238
Alignment:
Q  18 aacacatcagtactcaaaacttaagttattttagttaacattaatt-ggaagtatcggggaagatatcaatgcaggataattatcgcatactatcctgat 116  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||  |||||||||| |  | |||| ||||||||| ||||||| ||||| |||||||    
T  13353060 aacacatcagtactcaagagttaagttattttagttaacattaattccgaagtatcggagtcgctatcgatgcaggattattatcggatactctcctgat 13353159  T
Q  117 atgtatcagaaagtatcggat-aattattttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcgg 194  Q
    | ||||| | ||||||| ||| |||| ||||         ||||||||| ||||||||||| ||||| |||| ||||||    
T  13353160 acgtatcgggaagtatcagataaatttttttttttttaaataaaatttattcttcggatacgctcttgatacgtatcgg 13353238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 28 - 213
Target Start/End: Complemental strand, 45347541 - 45347354
Alignment:
Q  28 tactcaaaacttaagttattttagttaacattaattg-gaagtatcggggaagatatcaatgcaggataattatcgcatactatcctgatatgtatcaga 126  Q
    ||||||| | ||||||||||||| ||||| ||||||| ||| ||| |||| ||||||   |||||||||||||||  ||||| |||||||| |||||||     
T  45347541 tactcaagatttaagttattttatttaacgttaattgagaattattggggcagatataggtgcaggataattatcagatactttcctgatacgtatcagg 45347442  T
Q  127 aagtatcggataatta-ttttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatc 213  Q
    |||||||||||||||| ||||         ||||||||||||||||||||||||    |||| ||||| ||||||||  |||||||||    
T  45347441 aagtatcggataattattttttaaaaaaaataaaatttaatcttcggatactcttcggatacgtatcgaaaagtatcgggcaggtatc 45347354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 18 - 135
Target Start/End: Original strand, 45057166 - 45057284
Alignment:
Q  18 aacacatcagtactcaaaacttaagttattttagttaacattaatt-ggaagtatcggggaagatatcaatgcaggataattatcgcatactatcctgat 116  Q
    ||||||| ||||||||| | |||||||||||||||||||||||||| |||| |||| ||| |||||||  || ||||||||||||| ||||| || ||||    
T  45057166 aacacattagtactcaagagttaagttattttagttaacattaattgggaaatatcagggcagatatctgtgtaggataattatcgaatactctcatgat 45057265  T
Q  117 atgtatcagaaagtatcgg 135  Q
    | ||||| | |||||||||    
T  45057266 acgtatcgggaagtatcgg 45057284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 119 - 256
Target Start/End: Complemental strand, 52684352 - 52684215
Alignment:
Q  119 gtatcagaaagtatcggataattattttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgc 218  Q
    ||||| |||| |||||||||||||||||         ||||||||||| ||||||||||||| |||||| ||||||||||||||   ||||||||| |||    
T  52684352 gtatcggaaaatatcggataattattttttttaaaaataaaatttaatattcggatactctcctaatacgtatcggaaagtatcggacaggtatcggtgc 52684253  T
Q  219 atgatacgcagaagatacaatacatcatccattttgaa 256  Q
    | ||||||||  |||||| |||| ||||| ||||||||    
T  52684252 aggatacgcatgagatacgatacgtcatctattttgaa 52684215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 38 - 133
Target Start/End: Complemental strand, 29916025 - 29915929
Alignment:
Q  38 ttaagttattttagttaacattaattgg-aagtatcggggaagatatcaatgcaggataattatcgcatactatcctgatatgtatcagaaagtatc 133  Q
    |||||||||||||||||||||||||||| |||||| |||| |  |||| ||||||||||||||||  |||||||||||||| ||||| | |||||||    
T  29916025 ttaagttattttagttaacattaattgggaagtattggggcatgtatcgatgcaggataattatcagatactatcctgatacgtatcgggaagtatc 29915929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 38 - 133
Target Start/End: Complemental strand, 29965178 - 29965082
Alignment:
Q  38 ttaagttattttagttaacattaattgg-aagtatcggggaagatatcaatgcaggataattatcgcatactatcctgatatgtatcagaaagtatc 133  Q
    |||||||||||||||||||||||||||| |||||| |||| |  |||| ||||||||||||||||  |||||||||||||| ||||| | |||||||    
T  29965178 ttaagttattttagttaacattaattgggaagtattggggcatgtatcgatgcaggataattatcagatactatcctgatacgtatcgggaagtatc 29965082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 28 - 256
Target Start/End: Complemental strand, 42229907 - 42229688
Alignment:
Q  28 tactcaaaacttaagttattttagttaacattaatt-ggaagtatcggggaagatatcaatgcaggataattatcgcatactatcctgatatgtatcaga 126  Q
    ||||||| | ||||||||||||| |||||||||||| |||||||| |||| || |||   |||||||||||||||| ||||| |||||||              
T  42229907 tactcaagagttaagttattttaattaacattaattgggaagtattggggcaggtattggtgcaggataattatcggatactctcctgat---------- 42229818  T
Q  127 aagtatcggataattattttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgcatgatacg 226  Q
    | ||||||||||||||||||         ||||||||||| ||||||||||||  | |||| |||| | |||||||  |||||||||| |||| ||||||    
T  42229817 acgtatcggataattattttttttaaaaataaaatttaattttcggatactcttctgatacgtatcaggaagtatcgggcaggtatcggtgcaggatacg 42229718  T
Q  227 cagaagatacaatacatcatccattttgaa 256  Q
    |||  |||| ||||| ||||| ||||||||    
T  42229717 caggggatataatacgtcatctattttgaa 42229688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 86 - 256
Target Start/End: Complemental strand, 39664140 - 39663972
Alignment:
Q  86 atgcaggataattatcgcatactatcctgatatgtatcagaaagtatcggataattattttnnnnnnnnntaaaatttaatcttcggatactctcttaat 185  Q
    ||||||||||||||||| ||||| |||||||| ||||| | ||||||| ||||||||||           ||||| |||||||||| ||||| |  | ||    
T  39664140 atgcaggataattatcggatactttcctgatacgtatcgggaagtatcagataattatt--aaaaaaaaataaaaattaatcttcgaatactattctgat 39664043  T
Q  186 acatatcggaaagtatcatgcaggtatcgatgcatgatacgcagaagatacaatacatcatccattttgaa 256  Q
    || ||||||||||||||   ||||||||| |||| ||||||||||  ||| ||||||||| ||||||||||    
T  39664042 acgtatcggaaagtatcggacaggtatcggtgcaggatacgcagagaatagaatacatcaaccattttgaa 39663972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 104 - 256
Target Start/End: Complemental strand, 48333177 - 48333029
Alignment:
Q  104 atactatcctgatatgtatcagaaagtatcggataattattttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatca 203  Q
    ||||| |||||||| ||||||| |||||||  |||||||||||         |||||||||||||||| ||||||| |||||| ||||||| || |||      
T  48333177 atactttcctgatacgtatcaggaagtatcaaataattatttttttttaatataaaatttaatcttcgaatactcttttaatatatatcgggaaatat-- 48333080  T
Q  204 tgcaggtatcgatgcatgatacgcagaagatacaatacatcatccattttgaa 256  Q
      ||||||| |||||| ||| || |  ||||||||||||||||||||||||||    
T  48333079 --caggtattgatgcaggatgcgtaagagatacaatacatcatccattttgaa 48333029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 156 - 252
Target Start/End: Complemental strand, 3983811 - 3983715
Alignment:
Q  156 taaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgcatgatacgcagaagatacaatacatcatccattt 252  Q
    ||||||||||||||||||||||||| | |||| |||||| ||||||||  || |||||| |||| ||||| | || |||||| ||| ||||||||||    
T  3983811 taaaatttaatcttcggatactctcctgatacgtatcgggaagtatcagacaagtatcggtgcaggatacacggaggatacagtacgtcatccattt 3983715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 117 - 256
Target Start/End: Complemental strand, 40497483 - 40497344
Alignment:
Q  117 atgtatcagaaagtatcggataattattttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgat 216  Q
    ||||||| ||||||||||||||||||||||         ||||||||||| || ||||||||||   |||| |||||| |||||||  ||| |||||| |    
T  40497483 atgtatcggaaagtatcggataattattttttttaaaaataaaatttaatatttggatactctccggatacgtatcgggaagtatcgggcaagtatcggt 40497384  T
Q  217 gcatgatacgcagaagatacaatacatcatccattttgaa 256  Q
    ||| |||||||||  |||||  ||| ||||||||||||||    
T  40497383 gcaggatacgcaggggatacggtacgtcatccattttgaa 40497344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 100
Target Start/End: Complemental strand, 983439 - 983356
Alignment:
Q  18 aacacatcagtactcaaaacttaagttattttagttaacattaatt-ggaagtatcggggaagatatcaatgcaggataattat 100  Q
    ||||||| ||||||||| | ||||||| |||||||||||||||||| |||| |||||||| ||||| |  ||||||||||||||    
T  983439 aacacataagtactcaagagttaagttgttttagttaacattaattgggaactatcggggcagatagcggtgcaggataattat 983356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 119 - 256
Target Start/End: Original strand, 28882645 - 28882782
Alignment:
Q  119 gtatcagaaagtatcggataattattttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgc 218  Q
    ||||| |||||||||||| |||||||||         ||||||||||| || ||||||||||   |||| ||||||||||||||  |||  ||||| |||    
T  28882645 gtatcggaaagtatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggcatatatcggtgc 28882744  T
Q  219 atgatacgcagaagatacaatacatcatccattttgaa 256  Q
    |||||||||||  |||||  ||| ||||||||||||||    
T  28882745 atgatacgcaggggatacggtacgtcatccattttgaa 28882782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 117 - 253
Target Start/End: Original strand, 25937029 - 25937165
Alignment:
Q  117 atgtatcagaaagtatcggataattattttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgat 216  Q
    |||||||||||||||||||||||||| |||         ||||||||||| ||  |||||||||   |||| ||||||||||||||  ||| |||| | |    
T  25937029 atgtatcagaaagtatcggataattaatttttttaaaaataaaatttaatatttagatactctccagatacgtatcggaaagtatcgggcatgtattggt 25937128  T
Q  217 gcatgatacgcagaagatacaatacatcatccatttt 253  Q
    | | ||||||||| |||||| |||| |||||||||||    
T  25937129 gtaggatacgcaggagatacgatacgtcatccatttt 25937165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 2567134 - 2567178
Alignment:
Q  18 aacacatcagtactcaaaacttaagttattttagttaacattaat 62  Q
    ||||||||||||||||| | |||||||||||||||||||||||||    
T  2567134 aacacatcagtactcaagagttaagttattttagttaacattaat 2567178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 156 - 256
Target Start/End: Complemental strand, 35389864 - 35389764
Alignment:
Q  156 taaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgcatgatacgcagaagatacaatacatcatccattttga 255  Q
    ||||||||||| || ||||||||||   |||| |||||| |||||||  |||||||||| |||| |||||||||  |||||  ||| |||||||||||||    
T  35389864 taaaatttaatatttggatactctcccgatacgtatcgggaagtatcgggcaggtatcggtgcaggatacgcaggggatacggtacgtcatccattttga 35389765  T
Q  256 a 256  Q
    |    
T  35389764 a 35389764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 184 - 256
Target Start/End: Original strand, 42464939 - 42465011
Alignment:
Q  184 atacatatcggaaagtatcatgcaggtatcgatgcatgatacgcagaagatacaatacatcatccattttgaa 256  Q
    |||| |||||| |||||||  |||||||||| |||| |||||||||| |||||| ||| ||||||||||||||    
T  42464939 atacgtatcgggaagtatcgggcaggtatcggtgcaggatacgcagaggatacagtacgtcatccattttgaa 42465011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 119 - 256
Target Start/End: Complemental strand, 22310856 - 22310719
Alignment:
Q  119 gtatcagaaagtatcggataattattttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgc 218  Q
    |||||||||||||||||| |||||||||         ||||||||||| ||  |||||||| |  |||| |||||| |||||||| |||||||||| |||    
T  22310856 gtatcagaaagtatcggaaaattattttcttaaaaaataaaatttaatattttgatactctatcgatacgtatcgggaagtatcaggcaggtatcggtgc 22310757  T
Q  219 atgatacgcagaagatacaatacatcatccattttgaa 256  Q
    | ||||| |||  |||||  ||| ||||||||| ||||    
T  22310756 aggatacacaggggatacggtacgtcatccattgtgaa 22310719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 256
Target Start/End: Complemental strand, 983308 - 983208
Alignment:
Q  156 taaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgcatgatacgcagaagatacaatacatcatccattttga 255  Q
    |||||||||||||| |||||||||| | |||| |||||| ||||||||  ||| ||||  ||||  |||| |||  ||||| |||| |||||||||||||    
T  983308 taaaatttaatctttggatactctcctgatacgtatcgggaagtatcagacagatatcagtgcaaaatacacaggggatacgatacgtcatccattttga 983209  T
Q  256 a 256  Q
    |    
T  983208 a 983208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 256
Target Start/End: Complemental strand, 7327826 - 7327726
Alignment:
Q  156 taaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgcatgatacgcagaagatacaatacatcatccattttga 255  Q
    ||||||||||| || ||||||| ||   |||| |||||| |||||||  |||||||||| |||| |||||||||  |||||  ||| |||||||||||||    
T  7327826 taaaatttaatatttggatactatccggatacgtatcgggaagtatcgggcaggtatcggtgcaggatacgcaggggatacggtacgtcatccattttga 7327727  T
Q  256 a 256  Q
    |    
T  7327726 a 7327726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 256
Target Start/End: Complemental strand, 29915947 - 29915875
Alignment:
Q  184 atacatatcggaaagtatcatgcaggtatcgatgcatgatacgcagaagatacaatacatcatccattttgaa 256  Q
    |||| |||||| ||||||||  ||||||||| ||||||||||||||  ||||| |||| ||||| ||||||||    
T  29915947 atacgtatcgggaagtatcagacaggtatcggtgcatgatacgcaggggatacgatacgtcatctattttgaa 29915875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 256
Target Start/End: Complemental strand, 29965100 - 29965028
Alignment:
Q  184 atacatatcggaaagtatcatgcaggtatcgatgcatgatacgcagaagatacaatacatcatccattttgaa 256  Q
    |||| |||||| ||||||||  ||||||||| ||||||||||||||  ||||| |||| ||||| ||||||||    
T  29965100 atacgtatcgggaagtatcagacaggtatcggtgcatgatacgcaggggatacgatacgtcatctattttgaa 29965028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 205 - 256
Target Start/End: Complemental strand, 1528567 - 1528516
Alignment:
Q  205 gcaggtatcgatgcatgatacgcagaagatacaatacatcatccattttgaa 256  Q
    |||||||||||||||||||||||||  ||||  |||| ||||||||||||||    
T  1528567 gcaggtatcgatgcatgatacgcaggggatatgatacgtcatccattttgaa 1528516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 144
Target Start/End: Original strand, 19349538 - 19349596
Alignment:
Q  86 atgcaggataattatcgcatactatcctgatatgtatcagaaagtatcggataattatt 144  Q
    ||||||||||||||||| || || |||||||| ||||| | |||||||| |||||||||    
T  19349538 atgcaggataattatcggattctttcctgatacgtatcgggaagtatcgaataattatt 19349596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 202
Target Start/End: Complemental strand, 28704880 - 28704795
Alignment:
Q  117 atgtatcagaaagtatcggataattattttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatc 202  Q
    ||||||||||||||||||||||||||||||         ||||||||||| ||  |||||||||   |||||||| ||||||||||    
T  28704880 atgtatcagaaagtatcggataattattttttaaaaaaataaaatttaatattttgatactctccggatacatattggaaagtatc 28704795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 256
Target Start/End: Original strand, 1679702 - 1679802
Alignment:
Q  156 taaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgcatgatacgcagaagatacaatacatcatccattttga 255  Q
    ||||||||||| || ||||||||||   |||| |||||| |||||||  |||||||||| |||| |||| ||||  |||||  ||| | |||||||||||    
T  1679702 taaaatttaatatttggatactctccggatacgtatcgggaagtatcgggcaggtatcggtgcaggatatgcagtggatacggtacgttatccattttga 1679801  T
Q  256 a 256  Q
    |    
T  1679802 a 1679802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 228
Target Start/End: Complemental strand, 33240064 - 33239992
Alignment:
Q  156 taaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgcatgatacgca 228  Q
    |||||| |||| || ||||||||||   |||| |||||| |||||||  ||||||||||||||| ||||||||    
T  33240064 taaaatataatatttggatactctcccgatacgtatcgggaagtatcgggcaggtatcgatgcaggatacgca 33239992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 256
Target Start/End: Complemental strand, 48122939 - 48122839
Alignment:
Q  156 taaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgcatgatacgcagaagatacaatacatcatccattttga 255  Q
    ||||||||||| || |||||||||||  |||| |||||| || ||||  ||| |||||| |||| |||| ||||  |||||  ||| |||||||||||||    
T  48122939 taaaatttaatatttggatactctctggatacgtatcgggaaatatcgggcatgtatcggtgcaggatatgcaggggatacggtacgtcatccattttga 48122840  T
Q  256 a 256  Q
    |    
T  48122839 a 48122839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 52684580 - 52684536
Alignment:
Q  18 aacacatcagtactcaaaacttaagttattttagttaacattaat 62  Q
    ||||||| ||||||||| | || ||||||||||||||||||||||    
T  52684580 aacacattagtactcaatagttgagttattttagttaacattaat 52684536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 106; Significance: 4e-53; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 18 - 253
Target Start/End: Complemental strand, 34146433 - 34146197
Alignment:
Q  18 aacacatcagtactcaaaacttaagttattttagttaacattaattgg-aagtatcggggaagatatcaatgcaggataattatcgcatactatcctgat 116  Q
    |||| |||| ||||||| | |||| ||||||||||||||||||||||| ||||||||||| |||||||| ||||| |||||||||| ||||| |||||||    
T  34146433 aacaaatcaatactcaagagttaaattattttagttaacattaattgggaagtatcggggcagatatcagtgcagaataattatcggatactctcctgat 34146334  T
Q  117 atgtatcagaaagtatcggataattattttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgat 216  Q
    | ||||||| ||||||||||||||||||||         |||||||||||||| |||||||||| | |||| |||||| |||||||| |||| ||||| |    
T  34146333 acgtatcaggaagtatcggataattattttttttaaaaataaaatttaatctttggatactctcctgatacgtatcgggaagtatcaggcagatatcggt 34146234  T
Q  217 gcatgatacgcagaagatacaatacatcatccatttt 253  Q
    |||  ||||||||||||||| |||| |||||||||||    
T  34146233 gcagaatacgcagaagatacgatacgtcatccatttt 34146197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 22 - 256
Target Start/End: Complemental strand, 2319524 - 2319289
Alignment:
Q  22 catcagtactcaaaacttaagttattttagttaacattaattgg-aagtatcggggaagatatcaatgcaggataattatcgcatactatcctgatatgt 120  Q
    ||||||||||||| | |||||||||||||||||||||||||||| ||||||| ||| |||||||||| |||||||||||||| ||||| |||||||| ||    
T  2319524 catcagtactcaatagttaagttattttagttaacattaattgggaagtatcagggcagatatcaatccaggataattatcggatactctcctgatacgt 2319425  T
Q  121 atcagaaagtatcggataattattttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgcat 220  Q
    ||| | | ||||||||||||||||||         ||||||||||||||||||||||||  | |||| |||| | |||||||| ||| |||||| ||||     
T  2319424 atcgggacgtatcggataattattttttaaaaaaataaaatttaatcttcggatactcttctgatacgtatcaggaagtatcaagcaagtatcggtgcaa 2319325  T
Q  221 gatacgcagaagatacaatacatcatccattttgaa 256  Q
    |||||||||  ||||| |||| ||||||||||||||    
T  2319324 gatacgcaggggatacgatacgtcatccattttgaa 2319289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 28 - 256
Target Start/End: Complemental strand, 44156841 - 44156611
Alignment:
Q  28 tactcaaaacttaagttattttagttaacattaattgg-aagtatcggggaagatatcaatgcaggataattatcgcatactatcctgatatgtatcaga 126  Q
    ||||||| | |||||||||||||||||||||||||||| |||||| |||  || ||||  |||||||||||||||| |||| ||||||||| |||||||     
T  44156841 tactcaagagttaagttattttagttaacattaattgggaagtattgggtcaggtatcggtgcaggataattatcggataccatcctgatacgtatcagg 44156742  T
Q  127 aagtatcggataatta-ttttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgcatgatac 225  Q
    |||||||||||||||| ||||         ||||||||||||||||||||||||| | |||| |||||| ||||||||  || |||||||||||||||||    
T  44156741 aagtatcggataattattttttaaaaaaaataaaatttaatcttcggatactctcctgatacgtatcgggaagtatcagacatgtatcgatgcatgatac 44156642  T
Q  226 gcagaagatacaatacatcatccattttgaa 256  Q
    ||||  ||||| |||  ||||||||||||||    
T  44156641 gcaggggatacgatatgtcatccattttgaa 44156611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 19 - 263
Target Start/End: Complemental strand, 21104734 - 21104490
Alignment:
Q  19 acacatcagtactcaaaacttaagttattttagttaacattaatt-ggaagtatcggggaagatatcaatgcaggataattatcgcatactatcctgata 117  Q
    |||||||| ||||||||| |||||||||||||||||||||||||| ||||||||||||| |||||||  || |||||||| |||| ||||| ||||||||    
T  21104734 acacatcaatactcaaaagttaagttattttagttaacattaattgggaagtatcggggcagatatcggtgtaggataatgatcggatactttcctgata 21104635  T
Q  118 tgtatcagaaagtatcggataattattttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatg 217  Q
     ||||  | || |||||||||||||||||         || ||||||||||||||||||||  || |||| |||||| || |||||  ||| ||||| ||    
T  21104634 cgtatagggaaatatcggataattatttttaaaaaaagtataatttaatcttcggatactcctttgatacgtatcgggaaatatcagacagatatcggtg 21104535  T
Q  218 catgatacgcagaagatacaatacatcatccattttgaaagtattg 263  Q
    || |||||||||| ||||| |||| ||||||||||| |||||||||    
T  21104534 caagatacgcagaggatacgatacgtcatccatttt-aaagtattg 21104490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 18 - 256
Target Start/End: Original strand, 3545445 - 3545685
Alignment:
Q  18 aacacatcagtactcaaaacttaagttattttagttaacattaatt-ggaagtatcggggaagatatcaatgcaggataattatcgcatactatcctgat 116  Q
    ||||||||||||||||| | ||||||||||||| |||||||||||| |||||| | ||||||||||||| |||| ||||||||||  ||||| || ||||    
T  3545445 aacacatcagtactcaagaattaagttattttaattaacattaattaggaagttttggggaagatatcagtgcatgataattatcagatactctcttgat 3545544  T
Q  117 atgtatcagaaagtatcggataattatt-ttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcga 215  Q
    ||||||| | ||| ||| |||||||||| ||         ||||||||||||||||||| ||||| | ||||||||||  ||||||||  || ||||||     
T  3545545 atgtatcgggaagcatctgataattattatttttttaaaataaaatttaatcttcggatgctctcctgatacatatcgagaagtatcagacaagtatcgg 3545644  T
Q  216 tgcatgatacgcagaagatacaatacatcatccattttgaa 256  Q
    ||||  ||||| | ||||||| |||| ||||||||||||||    
T  3545645 tgcagaatacgtaaaagatacgatacgtcatccattttgaa 3545685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 18 - 253
Target Start/End: Original strand, 31236051 - 31236287
Alignment:
Q  18 aacacatcagtactcaaaacttaagttattttagttaacattaattg-gaagtatcggggaagatatcaatgcaggataattatcgcatactatcctgat 116  Q
    |||||||||||||| || | |||||||||||||||||||||| | || ||| ||||| || ||||||| ||| ||||||||||||  ||||| |||||||    
T  31236051 aacacatcagtactgaagagttaagttattttagttaacatttactgtgaaatatcgaggcagatatcgatgtaggataattatcagatactctcctgat 31236150  T
Q  117 atgtatcagaaagtatcggataattattttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgat 216  Q
    | ||||| | ||||||||| | ||||||||         ||||||||||||||||||||||||| | |||| |||||| || |||||||||||| | | |    
T  31236151 acgtatcgggaagtatcggctgattattttttaaaaaattaaaatttaatcttcggatactctcctgatacgtatcgggaaatatcatgcaggtgtgggt 31236250  T
Q  217 gcatgatacgcagaagatacaatacatcatccatttt 253  Q
    ||| |||||||||  |||||||||| | |||||||||    
T  31236251 gcaggatacgcaggggatacaatacgttatccatttt 31236287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 18 - 256
Target Start/End: Complemental strand, 35342571 - 35342331
Alignment:
Q  18 aacacatcagtactcaaaacttaagttattttagttaacattaatt-ggaagtatcggggaagatatcaatgcaggataattatcgcatactatcctgat 116  Q
    |||||||||||| |||| | |||||||||||||||||||||||||| ||||||||| ||| ||||| |  || |||||||| |||| ||||| |||||||    
T  35342571 aacacatcagtaatcaagagttaagttattttagttaacattaattgggaagtatcagggcagatacctgtgtaggataatgatcggatactctcctgat 35342472  T
Q  117 atgtatcagaaagtatcggataatta-ttttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcga 215  Q
    | ||||| | ||||||| |||||||| ||||         |||||||||||||||||||||||| || |||| |||||| |||||||| | ||||||||     
T  35342471 acgtatcgggaagtatcagataattatttttttttaaaaataaaatttaatcttcggatactcttttgatacgtatcgggaagtatcaggtaggtatcgg 35342372  T
Q  216 tgcatgatacgcagaagatacaatacatcatccattttgaa 256  Q
    |||| ||||||||   |||||  ||| ||||||||||||||    
T  35342371 tgcaggatacgcaagggatacggtacgtcatccattttgaa 35342331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 38 - 253
Target Start/End: Complemental strand, 12206257 - 12206042
Alignment:
Q  38 ttaagttattttagttaacattaattgg-aagtatcggggaagatatcaatgcaggataattatcgcatactatcctgatatgtatcagaaagtatcgga 136  Q
    ||||||||||||||||| |||||||||| ||||||||||| | |||||| |||||||||||||||| ||||| || ||||| |||||  ||  |||||||    
T  12206257 ttaagttattttagttaccattaattgggaagtatcggggcatatatcagtgcaggataattatcggatactctcatgatacgtatcgaaatttatcgga 12206158  T
Q  137 taattattttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgcatgatacgcagaagatac 236  Q
    |||||||| |         |||||||||||||||| |||||||| | |||| ||| | ||| ||||| ||||||||||||||| ||||| |||| |||||    
T  12206157 taattattat-tttttaaataaaatttaatcttcgaatactctcctgatacgtattgaaaaatatcaggcaggtatcgatgcaagatacacagatgatac 12206059  T
Q  237 aatacatcatccatttt 253  Q
     |||| |||||||||||    
T  12206058 gatacgtcatccatttt 12206042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 28 - 256
Target Start/End: Complemental strand, 1005755 - 1005527
Alignment:
Q  28 tactcaaaacttaagttattttagttaacattaattgg-aagtatcggggaagatatcaatgcaggataattatcgcatactatcctgatatgtatcaga 126  Q
    ||||||| | ||||||||||||| |||||||||||||| |||||| |||| ||||||   |||||||||||||||  ||||| | |||||| |||||||     
T  1005755 tactcaagagttaagttattttaattaacattaattgggaagtattggggcagatattggtgcaggataattatcagatactcttctgatacgtatcagg 1005656  T
Q  127 aagtatcggataattattttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgcatgatacg 226  Q
    ||||||| |||||||||||          ||||||||||||||| ||||||||  |||||| |||||| |||||||   ||||||||| |||| ||||||    
T  1005655 aagtatcagataattatttaaaaaataaataaaatttaatcttcagatactcttctaatacgtatcgggaagtatc-gacaggtatcggtgcaggatacg 1005557  T
Q  227 cagaagatacaatacatcatccattttgaa 256  Q
    |||  ||||| |||| ||||||||||||||    
T  1005556 caggggatacgatacgtcatccattttgaa 1005527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 28 - 256
Target Start/End: Original strand, 8482792 - 8483021
Alignment:
Q  28 tactcaaaacttaagttattttagttaacattaattgg-aagtatcggggaagatatcaatgcaggataattatcgcatactatcctgatatgtatcaga 126  Q
    ||||||| | ||||||||||||| |||||||| ||||| |||||| | || || ||||  |||||||||||||||| || || | ||||||||||||       
T  8482792 tactcaagagttaagttattttaattaacattgattgggaagtattgaggcaggtatcggtgcaggataattatcggatgctcttctgatatgtatcgcg 8482891  T
Q  127 aagtatcggataattattttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgcatgatacg 226  Q
    ||||||||||||||||||||         ||||||||||||||||||||||||  | |||| |||||||||||||||  ||| ||||| |||| ||||||    
T  8482892 aagtatcggataattattttttaaaaaaataaaatttaatcttcggatactcttctgatacgtatcggaaagtatcagacagatatcggtgcaggatacg 8482991  T
Q  227 cagaagatacaatacatcatccattttgaa 256  Q
    || | ||||| |||| |||| |||||||||    
T  8482992 caaaggatacgatacgtcattcattttgaa 8483021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 28 - 203
Target Start/End: Complemental strand, 3564083 - 3563907
Alignment:
Q  28 tactcaaaacttaagttattttagttaacattaattgg-aagtatcggggaagatatcaatgcaggataattatcgcatactatcctgatatgtatcaga 126  Q
    ||||||| | ||||||||||||| |||||||||||||| |||||| | || || |||| ||||||||||||||||| ||||| | |||||| ||||| |     
T  3564083 tactcaagagttaagttattttacttaacattaattgggaagtattgtggcaggtatcgatgcaggataattatcggatactcttctgatacgtatcggg 3563984  T
Q  127 aagtatcggataattattttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatca 203  Q
    ||||||| ||||||||||||         ||||||||||||||||||||||||| | |||| |||||| ||||||||    
T  3563983 aagtatcagataattattttttaaagaaataaaatttaatcttcggatactctcctgatacgtatcgggaagtatca 3563907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 38 - 256
Target Start/End: Original strand, 14217035 - 14217258
Alignment:
Q  38 ttaagttattttagttaacattaattgg-aagtatcggggaagatatcaatgcaggataattatcgcatactatcctgatatgtatcagaaagtatcgga 136  Q
    |||||| |||||| |||||||||||||| |||||| |||| |  ||||| |||||||||||||||| ||||| |||||||| ||||| | ||||||||||    
T  14217035 ttaagtcattttacttaacattaattgggaagtattggggcatgtatcagtgcaggataattatcggatactctcctgatacgtatcgggaagtatcgga 14217134  T
Q  137 taattatttt----nnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgcatgatacgcagaag 232  Q
    ||||||||||              |||||||||||||  |||||||||   |||| |||||||||||||||  ||| ||||| ||||  ||||||||  |    
T  14217135 taattattttaaaaaaaaaaaaaaaaaatttaatctttagatactctccagatacgtatcggaaagtatcaaacagatatcggtgcagaatacgcagggg 14217234  T
Q  233 atacaatacatcatccattttgaa 256  Q
    ||||||||| ||||||||||||||    
T  14217235 atacaatacgtcatccattttgaa 14217258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 96 - 256
Target Start/End: Complemental strand, 35996816 - 35996657
Alignment:
Q  96 attatcgcatactatcctgatatgtatcagaaagtatcggataattattttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcgga 195  Q
    ||||||| ||||| |||||||| ||||| | ||||||||||||||||||||         |||||||||||||||| |||||||| | |||| ||||| |    
T  35996816 attatcgaatactttcctgatacgtatcgggaagtatcggataattattttttaaaaaa-taaaatttaatcttcgaatactctcctgatacgtatcgaa 35996718  T
Q  196 aagtatcatgcaggtatcgatgcatgatacgcagaagatacaatacatcatccattttgaa 256  Q
    |||||||   ||||||||| |||| |||||||||  ||||||||||||||| |||||||||    
T  35996717 aagtatcgaacaggtatcggtgcaagatacgcaggggatacaatacatcattcattttgaa 35996657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 28 - 146
Target Start/End: Complemental strand, 14824382 - 14824263
Alignment:
Q  28 tactcaaaacttaagttattttagttaacattaattgg-aagtatcggggaagatatcaatgcaggataattatcgcatactatcctgatatgtatcaga 126  Q
    ||||||| | ||||||||||||| |||||||||||||| |||||| ||||||| |||   |||||||||||||||| ||||| |||||||| ||||| |     
T  14824382 tactcaagagttaagttattttaattaacattaattgggaagtattggggaaggtattggtgcaggataattatcggatactctcctgatacgtatcggg 14824283  T
Q  127 aagtatcggataattatttt 146  Q
    || |||||||||||||||||    
T  14824282 aaatatcggataattatttt 14824263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 28 - 256
Target Start/End: Complemental strand, 4562032 - 4561802
Alignment:
Q  28 tactcaaaacttaagttattttagttaacattaattgg-aagtatcggggaagatatcaatgcaggataattatcgcatactatcctgatatgtatcaga 126  Q
    ||||||| | |||||||||||||  ||||||||||||| |||||| |||  || |||   |||| ||||||||||| ||||| |||||||| ||||| |     
T  4562032 tactcaagagttaagttattttaagtaacattaattgggaagtattgggacaggtattggtgcatgataattatcggatactctcctgatacgtatcggg 4561933  T
Q  127 aagtatcggataatta-ttttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgcatgatac 225  Q
    ||||||| |||||||| ||||         ||||||||||||||||||||||||  | |||  |||||| |||||||  |||||||||| |||| |||||    
T  4561932 aagtatcagataattatttttttaaaaaaataaaatttaatcttcggatactcttctgatatgtatcgggaagtatcgggcaggtatcggtgcaggatac 4561833  T
Q  226 gcagaagatacaatacatcatccattttgaa 256  Q
     ||    |||| |||| ||||||||||||||    
T  4561832 acaaggaatacgatacgtcatccattttgaa 4561802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 117 - 256
Target Start/End: Complemental strand, 7876867 - 7876728
Alignment:
Q  117 atgtatcagaaagtatcggataattattttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgat 216  Q
    ||||||| ||||||||||||||||||||||         ||||||||||| || ||||||||||   |||| |||||| |||||||  |||||||||| |    
T  7876867 atgtatcggaaagtatcggataattatttttttaaaaaataaaatttaatatttggatactctccggatacgtatcgggaagtatcgggcaggtatcggt 7876768  T
Q  217 gcatgatacgcagaagatacaatacatcatccattttgaa 256  Q
    ||| |||||||||  |||||  ||| ||||||||||||||    
T  7876767 gcaggatacgcaggggatacggtacgtcatccattttgaa 7876728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 119 - 256
Target Start/End: Complemental strand, 33324969 - 33324832
Alignment:
Q  119 gtatcagaaagtatcggataattattttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgc 218  Q
    ||||| ||||||||| ||||||||||||         ||||||||||| || ||||||||||   |||| |||||| |||||||  |||||||||| |||    
T  33324969 gtatcggaaagtatcagataattattttttttaaaaataaaatttaatatttggatactctccggatacgtatcgggaagtatcgggcaggtatcggtgc 33324870  T
Q  219 atgatacgcagaagatacaatacatcatccattttgaa 256  Q
    | |||||||||  |||||  ||||||||||||||||||    
T  33324869 aggatacgcaggggatacggtacatcatccattttgaa 33324832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 156 - 256
Target Start/End: Original strand, 4170506 - 4170606
Alignment:
Q  156 taaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgcatgatacgcagaagatacaatacatcatccattttga 255  Q
    ||||||||||| || ||||||||||   |||| |||||| |||||||| |||||||||| |||| |||||||||  |||||  ||| |||||||||||||    
T  4170506 taaaatttaatatttggatactctccggatacgtatcgggaagtatcaggcaggtatcggtgcaggatacgcaggggatacggtacgtcatccattttga 4170605  T
Q  256 a 256  Q
    |    
T  4170606 a 4170606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 38 - 256
Target Start/End: Complemental strand, 4355545 - 4355339
Alignment:
Q  38 ttaagttattttagttaacattaatt-ggaagtatcggggaagatatcaatgcaggataattatcgcatactatcctgatatgtatcagaaagtatcgga 136  Q
    |||||||||||||||||||||||||| |||||||| |||| || ||||| || |||||||||||||              | ||||| | ||||||||||    
T  4355545 ttaagttattttagttaacattaattgggaagtattggggcaggtatcagtgtaggataattatcg-------------gacgtatcgggaagtatcgga 4355459  T
Q  137 taattattttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgcatgatacgcagaagatac 236  Q
    |||||| |||         |||||||||||||| | |||||||| | |||| |||||| |||||||| |||||||||| ||||  ||||||||   ||||    
T  4355458 taattagttttttaaaaaataaaatttaatctttgcatactctcctgatacgtatcgggaagtatcaagcaggtatcggtgcagaatacgcagggaatac 4355359  T
Q  237 aatacatcatccattttgaa 256  Q
     |||| ||||||||||||||    
T  4355358 gatacgtcatccattttgaa 4355339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 28 - 142
Target Start/End: Complemental strand, 24585778 - 24585662
Alignment:
Q  28 tactcaaaacttaagttattttagttaa-cattaattgg-aagtatcggggaagatatcaatgcaggataattatcgcatactatcctgatatgtatcag 125  Q
    ||||||| | |||||||||||||||||| |||||||||| ||||||  ||| || ||| | |||||||||||||||| ||||| |||||||| ||||||     
T  24585778 tactcaagagttaagttattttagttaaacattaattgggaagtattagggcaggtattagtgcaggataattatcgaatactctcctgatacgtatcaa 24585679  T
Q  126 aaagtatcggataatta 142  Q
     || ||| |||||||||    
T  24585678 gaaatattggataatta 24585662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 156 - 256
Target Start/End: Original strand, 37134302 - 37134402
Alignment:
Q  156 taaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgcatgatacgcagaagatacaatacatcatccattttga 255  Q
    |||||||||||||||  |||||||||| |||| |||||| |||||||| |||| ||||  |||| |||||||||| |||||  ||| ||||| |||||||    
T  37134302 taaaatttaatcttcatatactctcttgatacgtatcgggaagtatcaagcagatatcagtgcaggatacgcagaggatacggtacgtcatctattttga 37134401  T
Q  256 a 256  Q
    |    
T  37134402 a 37134402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 38 - 132
Target Start/End: Complemental strand, 5588271 - 5588176
Alignment:
Q  38 ttaagttattttagttaacattaatt-ggaagtatcggggaagatatcaatgcaggataattatcgcatactatcctgatatgtatcagaaagtat 132  Q
    |||||||||||||||||||||||||| |||||| | |||| || ||||  || ||||||||||| | ||||| || ||||||||||||| ||||||    
T  5588271 ttaagttattttagttaacattaattgggaagtgttggggcaggtatcggtgtaggataattattggatactctcatgatatgtatcaggaagtat 5588176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 256
Target Start/End: Original strand, 28746657 - 28746756
Alignment:
Q  157 aaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgcatgatacgcagaagatacaatacatcatccattttgaa 256  Q
    |||| ||||||||||||||||||  | |||| ||||| ||||||||  |||||||||| |||| |||||||||  ||||| |||| ||| ||||||||||    
T  28746657 aaaaattaatcttcggatactcttctgatacgtatcgaaaagtatcgggcaggtatcggtgcaggatacgcaggggatacgatacgtcaaccattttgaa 28746756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 28 - 256
Target Start/End: Original strand, 1776311 - 1776540
Alignment:
Q  28 tactcaaaacttaagttattttagttaacattaattggaagt-atcggggaagatatcaatgcaggataattatcgcatactatcctgatatgtatcaga 126  Q
    ||||||| | ||||||||||||| ||||  |||||||||| | || |||| || |||   |||||||||||||||  ||||| | |||||| ||||| |     
T  1776311 tactcaagagttaagttattttatttaatgttaattggaaattattggggcaggtataggtgcaggataattatcagatacttttctgatacgtatcggg 1776410  T
Q  127 aagtatcggataattattttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgcatgatacg 226  Q
    |||||||| || ||| ||||         ||||||||||||||||||||||||  | |||| |||||||||  |||  |||||||||| ||||  |||||    
T  1776411 aagtatcgaatgattttttttttaaaaaataaaatttaatcttcggatactcttctgatacgtatcggaaatgatcgggcaggtatcggtgcagaatacg 1776510  T
Q  227 cagaagatacaatacatcatccattttgaa 256  Q
    ||   ||||| |||| ||| ||||||||||    
T  1776511 caagggatacgatacgtcaaccattttgaa 1776540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 28 - 125
Target Start/End: Original strand, 40431896 - 40431994
Alignment:
Q  28 tactcaaaacttaagttattttagttaacattaattggaa-gtatcggggaagatatcaatgcaggataattatcgcatactatcctgatatgtatcag 125  Q
    ||||||| | ||||||||||||||| ||||||||||| || |||| |||| || || |  |||||||||||||||| ||||| |||||||| |||||||    
T  40431896 tactcaatagttaagttattttagtaaacattaattgaaaagtattggggcaggtaacggtgcaggataattatcggatactgtcctgatacgtatcag 40431994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 122
Target Start/End: Complemental strand, 10573747 - 10573642
Alignment:
Q  18 aacacatcagtactcaaaacttaagttattttagttaacattaattg-gaagtatcggggaagatatcaatgcaggataattatcgcatactatcctgat 116  Q
    ||||||||| ||||||| | |||||||||||| |||||||||||||| ||| |||||||  |  |||| |||||| |||||||||| ||||| ||| |||    
T  10573747 aacacatcactactcaatagttaagttattttggttaacattaattgagaaatatcgggacatgtatcgatgcagaataattatcggatactctccagat 10573648  T
Q  117 atgtat 122  Q
    | ||||    
T  10573647 acgtat 10573642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 156 - 261
Target Start/End: Original strand, 40497389 - 40497494
Alignment:
Q  156 taaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgcatgatacgcagaagatacaatacatcatccattttga 255  Q
    |||||||||||||| |||||||||| | |||| |||||| ||||||||  ||||||||  |||| |||||||||  ||||   ||| ||||||||||| |    
T  40497389 taaaatttaatctttggatactctcctgatacgtatcgggaagtatcagacaggtatcactgcaagatacgcaggggataaggtacgtcatccattttta 40497488  T
Q  256 aagtat 261  Q
    ||||||    
T  40497489 aagtat 40497494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 156 - 256
Target Start/End: Original strand, 38602326 - 38602426
Alignment:
Q  156 taaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgcatgatacgcagaagatacaatacatcatccattttga 255  Q
    ||||||||||| || ||||||||||   |||| |||||| |||||||  |||||||||| |||| |||||||||  |||||  ||| |||||||||||||    
T  38602326 taaaatttaatatttggatactctccggatacgtatcgggaagtatcgggcaggtatcggtgcaggatacgcaggggatacggtacgtcatccattttga 38602425  T
Q  256 a 256  Q
    |    
T  38602426 a 38602426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 256
Target Start/End: Complemental strand, 24585637 - 24585544
Alignment:
Q  162 ttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgcatgatacgcagaagatacaatacatcatccattttgaa 256  Q
    |||||||| |||||| ||| | |||| |||| | ||||||||  ||||||||| |||| |||||||||  ||||| |||||||||||||||||||    
T  24585637 ttaatctttggatacactcctgatacgtatctggaagtatcagacaggtatcggtgcaggatacgcagg-gatacgatacatcatccattttgaa 24585544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 158 - 256
Target Start/End: Complemental strand, 25933677 - 25933579
Alignment:
Q  158 aaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgcatgatacgcagaagatacaatacatcatccattttgaa 256  Q
    ||||||||||||||||||||||| | ||   |||||  ||||||||   || ||| | ||||||||||||||  ||||| |||||||||||||||||||    
T  25933677 aaatttaatcttcggatactctcctgatctgtatcgagaagtatcagatagatattggtgcatgatacgcaggggatacgatacatcatccattttgaa 25933579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 67
Target Start/End: Complemental strand, 9293358 - 9293309
Alignment:
Q  18 aacacatcagtactcaaaacttaagttattttagttaacattaattggaa 67  Q
    |||||||| |||||||| | || |||||||||||||||||||||||||||    
T  9293358 aacacatcggtactcaatagttgagttattttagttaacattaattggaa 9293309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 256
Target Start/End: Original strand, 6497653 - 6497753
Alignment:
Q  156 taaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgcatgatacgcagaagatacaatacatcatccattttga 255  Q
    ||||||||||| || ||||||||||   |||| |||||| ||| ||||  ||||||||| |||| |||||||||  |||||  ||| |||||||||||||    
T  6497653 taaaatttaatatttggatactctccggatacgtatcgggaagaatcagacaggtatcggtgcaggatacgcaggggatacggtacgtcatccattttga 6497752  T
Q  256 a 256  Q
    |    
T  6497753 a 6497753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 256
Target Start/End: Original strand, 7807339 - 7807478
Alignment:
Q  117 atgtatcagaaagtatcggataattattttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgat 216  Q
    ||||||| |||||||||||||| |||||||         ||||||||||| || ||||||| ||   |||| |||||| |||||||   ||||||||| |    
T  7807339 atgtatcggaaagtatcggatagttattttttaaaaaaataaaatttaatatttggatactttccggatacgtatcgggaagtatcgaacaggtatcggt 7807438  T
Q  217 gcatgatacgcagaagatacaatacatcatccattttgaa 256  Q
     || |||||||||  ||||| |||| ||||||||||||||    
T  7807439 acaagatacgcaggggatacgatacgtcatccattttgaa 7807478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 256
Target Start/End: Complemental strand, 22484381 - 22484281
Alignment:
Q  156 taaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgcatgatacgcagaagatacaatacatcatccattttga 255  Q
    ||||||||||| || ||||||||||   |||| |||||| |||||||   ||| |||||||||| |||||||||   ||||  |||||||||||||||||    
T  22484381 taaaatttaatatttggatactctccggatacgtatcgggaagtatcggacagatatcgatgcaggatacgcagggaatacggtacatcatccattttga 22484282  T
Q  256 a 256  Q
    |    
T  22484281 a 22484281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 126 - 228
Target Start/End: Original strand, 40308871 - 40308973
Alignment:
Q  126 aaagtatcggataattattttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgcatgatac 225  Q
    |||||||||||||||||||||         ||||||||||| || ||||||||||   |||| |||||| |||||||  |||||||||| |||| |||||    
T  40308871 aaagtatcggataattattttttttaaaaataaaatttaatatttggatactctccggatacgtatcgggaagtatcgggcaggtatcggtgcaggatac 40308970  T
Q  226 gca 228  Q
    |||    
T  40308971 gca 40308973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 158 - 253
Target Start/End: Original strand, 40432003 - 40432094
Alignment:
Q  158 aaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgcatgatacgcagaagatacaatacatcatccatttt 253  Q
    ||||||||||||| ||||||||| | |||| |||| ||||||   ||||||||||||||||| |||  ||||  ||||| |||| |||||||||||    
T  40432003 aaatttaatcttcagatactctcatgatacgtatcagaaagt---atgcaggtatcgatgcaggattggcag-ggatacgatacttcatccatttt 40432094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 256
Target Start/End: Complemental strand, 16561914 - 16561814
Alignment:
Q  156 taaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgcatgatacgcagaagatacaatacatcatccattttga 255  Q
    ||||||||||| || ||||||||||   |||| |||||| |||||||  |||||||||| ||||  |||||||   |||||  ||| |||||||||||||    
T  16561914 taaaatttaatatttggatactctccggatacgtatcgggaagtatcgggcaggtatcggtgcagaatacgcaagggatacggtacgtcatccattttga 16561815  T
Q  256 a 256  Q
    |    
T  16561814 a 16561814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 256
Target Start/End: Complemental strand, 18301086 - 18300986
Alignment:
Q  156 taaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgcatgatacgcagaagatacaatacatcatccattttga 255  Q
    ||||||||||| || ||||||||||   |||| |||||  ||||||||  ||||||||| ||||  |||| |||  ||||| |||| |||||||||||||    
T  18301086 taaaatttaatatttggatactctcccgatacgtatcgagaagtatcagacaggtatcggtgcagaatacacaggggatacgatacgtcatccattttga 18300987  T
Q  256 a 256  Q
    |    
T  18300986 a 18300986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 256
Target Start/End: Complemental strand, 22571051 - 22570951
Alignment:
Q  156 taaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgcatgatacgcagaagatacaatacatcatccattttga 255  Q
    ||||||||||| || |||||||| |   |||| |||| | |||||||  |||||||||| |||| |||||||||| |||||  ||| ||||| |||||||    
T  22571051 taaaatttaatatttggatactccccggatacgtatcaggaagtatcgggcaggtatcggtgcaggatacgcagaggatacggtacgtcatctattttga 22570952  T
Q  256 a 256  Q
    |    
T  22570951 a 22570951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 93; Significance: 2e-45; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 18 - 256
Target Start/End: Original strand, 46431798 - 46432037
Alignment:
Q  18 aacacatcagtactcaaaacttaagttattttagttaacattaattg-gaagtatcggggaagatatcaatgcaggataattatcgcatactatcctgat 116  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||| ||| |||| ||| || ||||  |||| ||||||||||| ||||| |||||||    
T  46431798 aacacatcagtactcaagagttaagttattttagttaacattaattgtgaaatatcagggcaggtatcggtgcatgataattatcggatactctcctgat 46431897  T
Q  117 atgtatcagaaagtatcggataattattttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgat 216  Q
    |  ||||  |||||||||||||||||||||         |||||||||||||| |||||||||||| |||| |||||| ||||||||  ||||||||| |    
T  46431898 acatatcgaaaagtatcggataattatttttttttaaaataaaatttaatctttggatactctcttgatacgtatcgggaagtatcagtcaggtatcgtt 46431997  T
Q  217 gcatgatacgcagaagatacaatacatcatccattttgaa 256  Q
    ||| |||| ||||| ||||| |||| |||||| |||||||    
T  46431998 gcaggatatgcagaggatacgatacgtcatccgttttgaa 46432037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 28 - 256
Target Start/End: Complemental strand, 40694313 - 40694084
Alignment:
Q  28 tactcaaaacttaagttattttagttaacattaattgg-aagtatcggggaagatatcaatgcaggataattatcgcatactatcctgatatgtatcaga 126  Q
    ||||||| | |||||||||||||||||| ||||||||| |||||| |||| |||||||| |||||||||||||| | ||||| |||| ||| ||||| |     
T  40694313 tactcaagagttaagttattttagttaatattaattgggaagtattggggcagatatcagtgcaggataattattggatactctcctcatacgtatcggg 40694214  T
Q  127 aagtatcggataattattttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgcatgatacg 226  Q
    ||||||| ||||||||||||         ||||||||||||||| ||||||||| | |||| |||||| ||||||||  ||||||||| ||||  |||||    
T  40694213 aagtatcagataattattttataaaaaaataaaatttaatcttcagatactctcctgatacgtatcgggaagtatcaatcaggtatcggtgcagaatacg 40694114  T
Q  227 cagaagatacaatacatcatccattttgaa 256  Q
    ||   ||||| |||||||||||||||||||    
T  40694113 catgggatacgatacatcatccattttgaa 40694084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 18 - 256
Target Start/End: Complemental strand, 17892501 - 17892262
Alignment:
Q  18 aacacatcagtactcaaaacttaagttattttagttaacattaatt-ggaagtatcggggaagatatcaatgcaggataattatcgcatactatcctgat 116  Q
    ||||||||||||||||| | |||||||||||| ||||||||||||| ||||||||||||| |||||    || |||||||| || | ||||| |||||||    
T  17892501 aacacatcagtactcaagagttaagttatttttgttaacattaattgggaagtatcggggcagatactggtgtaggataatgattggatactctcctgat 17892402  T
Q  117 atgtatcagaaagtatcggataattattttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgat 216  Q
    | ||||  | |||||||  |||||||||||         ||||||||||||||||||||||||  | ||||||||||| |||||||  |||||||||| |    
T  17892401 acgtattgggaagtatcatataattatttttttttaaaataaaatttaatcttcggatactcttctgatacatatcgggaagtatcgggcaggtatcggt 17892302  T
Q  217 gcatgatacgcagaagatacaatacatcatccattttgaa 256  Q
    | ||||||||||  ||||||  ||| || |||||||||||    
T  17892301 gtatgatacgcatgagatacggtacgtcgtccattttgaa 17892262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 18 - 133
Target Start/End: Original strand, 44521911 - 44522027
Alignment:
Q  18 aacacatcagtactcaaaacttaagttattttagttaacattaattggaa-gtatcggggaagatatcaatgcaggataattatcgcatactatcctgat 116  Q
    ||||||| ||||||||| | |||||||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||| ||||| |||||||    
T  44521911 aacacattagtactcaagagttaagttattttagttaacattaattggaaagtatcggggcagatatcaatgaaggataattatcggatactctcctgat 44522010  T
Q  117 atgtatcagaaagtatc 133  Q
    | ||||| |||| ||||    
T  44522011 acgtatcggaaaatatc 44522027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 28 - 256
Target Start/End: Original strand, 36511808 - 36512038
Alignment:
Q  28 tactcaaaacttaagttattttagttaacattaattgg-aagtatcggggaagatatcaatgcaggataattatcgcatactatcctgatatgtatcaga 126  Q
    ||||||| | ||||||||||||| ||||| |||||||| || ||| |||| || ||| | | |||||||||||||| ||||| |||||||| |||||||     
T  36511808 tactcaagagttaagttattttatttaacgttaattgggaattattggggcaggtataagttcaggataattatcggatactttcctgatacgtatcagg 36511907  T
Q  127 aagtatcggataatta-ttttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgcatgatac 225  Q
    |||||||||||||||| ||||         ||||||||||||||||||||||||  | |||| ||||||||||||||  ||| ||||||  ||| |||||    
T  36511908 aagtatcggataattatttttttaaaaaaataaaatttaatcttcggatactcttctgatacgtatcggaaagtatcgggcaagtatcggcgcaggatac 36512007  T
Q  226 gcagaagatacaatacatcatccattttgaa 256  Q
    |||   |||||||||| ||| ||||||||||    
T  36512008 gcacgggatacaatacgtcaaccattttgaa 36512038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 18 - 202
Target Start/End: Original strand, 42630349 - 42630535
Alignment:
Q  18 aacacatcagtactcaaaacttaagttattttagttaacattaattg-gaagtatcggggaagatatcaatgcaggataattatcgcatactatcctgat 116  Q
    ||||||| |||||| || | || |||||||||||||||||||||||| |||||||||| | |||||||| |||| ||||||||||| |||||  ||||||    
T  42630349 aacacataagtactgaagagttcagttattttagttaacattaattgtgaagtatcggagcagatatcagtgcaagataattatcggatactcacctgat 42630448  T
Q  117 atgtatcagaaagtatcggataattatt-ttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatc 202  Q
    | ||||||| |||||||||||||||||| ||         |||||||||||||||||||| |||| | |||| ||||||||| ||||    
T  42630449 acgtatcaggaagtatcggataattattatttttttaaaataaaatttaatcttcggatattctcctgatacgtatcggaaaatatc 42630535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 21 - 132
Target Start/End: Complemental strand, 49470530 - 49470419
Alignment:
Q  21 acatcagtactcaaaacttaagttattttagttaacattaattggaagtatcggggaagatatcaatgcaggataattatcgcatactatcctgatatgt 120  Q
    |||| ||||||||| | ||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||  ||||| |||||||| ||    
T  49470530 acatgagtactcaagagttaagttattttagttaacattaattggaagtatcggggcagatatcagtgcaggataattatcagatactctcctgatacgt 49470431  T
Q  121 atcagaaagtat 132  Q
    ||| | ||||||    
T  49470430 atcgggaagtat 49470419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 18 - 224
Target Start/End: Original strand, 24793596 - 24793803
Alignment:
Q  18 aacacatcagtactcaaaacttaagttattttagttaacattaatt-ggaagtatcggggaagatatcaatgcaggataattatcgcatactatcctgat 116  Q
    ||||||||||||||||| | |||||||||||||||||||||||||| |||||||||| || || ||    || |||||||| |||| ||||| |||||||    
T  24793596 aacacatcagtactcaagagttaagttattttagttaacattaattgggaagtatcgaggtagttactggtgtaggataatgatcggatactctcctgat 24793695  T
Q  117 atgtatcagaaagtatcggataattattttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgat 216  Q
    | ||||  | ||||||| ||||||||||||         ||||||||||||||||||||||||  | |||| ||||| ||||||| |  |||||||||||    
T  24793696 acgtattgggaagtatcagataattatttttttaaaaaataaaatttaatcttcggatactcttctgatacgtatcgaaaagtattagacaggtatcgat 24793795  T
Q  217 gcatgata 224  Q
    ||| ||||    
T  24793796 gcaggata 24793803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 18 - 256
Target Start/End: Original strand, 37992399 - 37992637
Alignment:
Q  18 aacacatcagtactcaaaacttaagttattttagttaacattaattg-gaagtatcggggaagatatcaatgcaggataattatcgcatactatcctgat 116  Q
    |||||||| |||||||| | ||||||||||||||||||  ||||||| ||| |||||||| |||||||  ||||| ||||| |||  ||||| |||||||    
T  37992399 aacacatcggtactcaagagttaagttattttagttaa--ttaattgagaaatatcggggcagatatcggtgcagaataatcatcagatactctcctgat 37992496  T
Q  117 atgtatcagaaagtatcggataatta-ttttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcga 215  Q
    ||||||| | || ||||||||||||| ||||         |||||||||||||| |||||||||  | |||| |||||||||||||||  || ||||||     
T  37992497 atgtatcgggaattatcggataattatttttttaaaaaaataaaatttaatctttggatactcttctgatacgtatcggaaagtatcagacatgtatcgg 37992596  T
Q  216 tgcatgatacgcagaagatacaatacatcatccattttgaa 256  Q
    |||| ||| ||||   |||||||||| || |||||||||||    
T  37992597 tgcaagatccgcaagggatacaatacgtcttccattttgaa 37992637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 28 - 179
Target Start/End: Original strand, 31946101 - 31946253
Alignment:
Q  28 tactcaaaacttaagttattttagttaacattaattgg-aagtatcggggaagatatcaatgcaggataattatcgcatactatcctgatatgtatcaga 126  Q
    ||||||| | ||||||||||||| |||||||||||||| |||||| |||| ||||||   | |||||||||||||| ||||| |||||||| ||||| |     
T  31946101 tactcaagagttaagttattttaattaacattaattgggaagtattggggcagatattgttacaggataattatcggatactctcctgatacgtatcggg 31946200  T
Q  127 aagtatcggataattattttnnnnnnnnntaaaatttaatcttcggatactct 179  Q
    ||||||||||||||||||||         ||||||||||||||||||||||||    
T  31946201 aagtatcggataattattttttttaaaaataaaatttaatcttcggatactct 31946253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 18 - 179
Target Start/End: Complemental strand, 36943922 - 36943760
Alignment:
Q  18 aacacatcagtactcaaaacttaagttattttagttaacattaatt-ggaagtatcggggaagatatcaatgcaggataattatcgcatactatcctgat 116  Q
    ||||||||| ||||||| | |||||||||||||||||||||||||| ||||||||| ||| ||||| |  || |||||||| |||  ||||| |||||||    
T  36943922 aacacatcactactcaagagttaagttattttagttaacattaattgggaagtatcagggcagataccggtgtaggataatgatcagatactctcctgat 36943823  T
Q  117 atgtatcagaaagtatcggataattattttnnnnnnnnntaaaatttaatcttcggatactct 179  Q
    | ||||||| ||||||| ||||||||||||         |||| |||||||||||||||||||    
T  36943822 acgtatcaggaagtatcagataattatttttaaaaaaaataaattttaatcttcggatactct 36943760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 16 - 145
Target Start/End: Original strand, 3109168 - 3109298
Alignment:
Q  16 ataacacatcagtactcaaaacttaagttattttagttaacattaatt-ggaagtatcggggaagatatcaatgcaggataattatcgcatactatcctg 114  Q
    ||||||||||||||||||| | |||||||||||||||||||||||||| ||||||||||||| ||||| |  || |||||||| || | ||||| ||| |    
T  3109168 ataacacatcagtactcaagagttaagttattttagttaacattaattgggaagtatcggggcagataccggtgtaggataatgattggatactctccgg 3109267  T
Q  115 atatgtatcagaaagtatcggataattattt 145  Q
    ||| |||||   |||||||||||||||||||    
T  3109268 atacgtatcgagaagtatcggataattattt 3109298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 253
Target Start/End: Complemental strand, 2586589 - 2586353
Alignment:
Q  18 aacacatcagtactcaaaacttaagttattttagttaacattaatt-ggaagtatcggggaagatatcaatgcaggataattatcgcatactatcctgat 116  Q
    ||||||||||| || || | |||||||||||||||||||||||||| ||||||||||||| ||||| |  || |||||||| |||  ||||| ||||| |    
T  2586589 aacacatcagtcctgaagagttaagttattttagttaacattaattgggaagtatcggggcagataccggtgtaggataatgatcagatactctcctggt 2586490  T
Q  117 atgtatcagaaagtatcggataattattttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgat 216  Q
    ||||||| | |||||| |||||||||||||          ||| |||||||||||||||||||  | |||| ||| ||||||||||  |||||| ||| |    
T  2586489 atgtatcgggaagtataggataattattttttaaaaaaacaaattttaatcttcggatactcttctgatacgtattggaaagtatcgggcaggtgtcggt 2586390  T
Q  217 gcatgatacgcagaagatacaatacatcatccatttt 253  Q
    | | ||||| |||  |||||  ||| |||||||||||    
T  2586389 gaaggatactcaggggatacggtacgtcatccatttt 2586353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 16 - 146
Target Start/End: Complemental strand, 754425 - 754294
Alignment:
Q  16 ataacacatcagtactcaaaacttaagttattttagttaacattaattgg-aagtatcggggaagatatcaatgcaggataattatcgcatactatcctg 114  Q
    ||||||||||| ||| ||| | |||||||| ||||||||||||||| ||| |||||||||||  ||||||  || |||||||| |||| ||||| |||||    
T  754425 ataacacatcaatacacaagagttaagttagtttagttaacattaaatggtaagtatcggggcggatatcggtgtaggataatgatcggatactctcctg 754326  T
Q  115 atatgtatcagaaagtatcggataattatttt 146  Q
    ||| ||||||| ||||||  ||||||||||||    
T  754325 atacgtatcaggaagtatatgataattatttt 754294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 28 - 138
Target Start/End: Complemental strand, 51859038 - 51858927
Alignment:
Q  28 tactcaaaacttaagttattttagttaacattaattgg-aagtatcggggaagatatcaatgcaggataattatcgcatactatcctgatatgtatcaga 126  Q
    ||||||| | |||||||||||||||||||||||||||| |||||| | || || ||||| |||| ||||||||||| ||||| |||||||| ||||| |     
T  51859038 tactcaagagttaagttattttagttaacattaattgggaagtattgaggcaggtatcagtgcaagataattatcggatactctcctgatacgtatcggg 51858939  T
Q  127 aagtatcggata 138  Q
    ||||||||||||    
T  51858938 aagtatcggata 51858927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 156 - 256
Target Start/End: Complemental strand, 41145726 - 41145626
Alignment:
Q  156 taaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgcatgatacgcagaagatacaatacatcatccattttga 255  Q
    ||||||||||| || ||||||||||  ||||| ||||||||||||||   |||||||||||||| |||||||||  |||||| ||| |||||||||||||    
T  41145726 taaaatttaatatttggatactctccgaatacgtatcggaaagtatcggacaggtatcgatgcaggatacgcaggggatacagtacgtcatccattttga 41145627  T
Q  256 a 256  Q
    |    
T  41145626 a 41145626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 28 - 145
Target Start/End: Complemental strand, 1177220 - 1177102
Alignment:
Q  28 tactcaaaacttaagttattttagttaacattaattgg-aagtatcggggaagatatcaatgcaggataattatcgcatactatcctgatatgtatcaga 126  Q
    ||||||| | ||||||||||||| ||||| |||||||| || ||| |||| || |||   |||||||||||||||| ||||| |||||||| ||||| |     
T  1177220 tactcaagagttaagttattttatttaacgttaattgggaattattggggcaggtataggtgcaggataattatcggatactttcctgatacgtatcggg 1177121  T
Q  127 aagtatcggataattattt 145  Q
    |||||||||||||||||||    
T  1177120 aagtatcggataattattt 1177102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 119 - 256
Target Start/End: Complemental strand, 52721415 - 52721278
Alignment:
Q  119 gtatcagaaagtatcggataattattttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgc 218  Q
    ||||| ||||||||||||||||||||||         ||||||||||| || ||||||||||  ||||| |||||| |||||||| |||| ||||| |||    
T  52721415 gtatcggaaagtatcggataattattttataaaaaaataaaatttaatatttggatactctccgaatacgtatcgggaagtatcaggcagatatcggtgc 52721316  T
Q  219 atgatacgcagaagatacaatacatcatccattttgaa 256  Q
    | |||||||||  ||||| |||| ||||| ||||||||    
T  52721315 aggatacgcaggggatacgatacgtcatctattttgaa 52721278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 117 - 256
Target Start/End: Original strand, 8064074 - 8064213
Alignment:
Q  117 atgtatcagaaagtatcggataattattttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgat 216  Q
    ||||||| ||||||||||||||||||||||         ||||||||||| ||  |||||||||   |||| ||||||||||||||  |||||||||| |    
T  8064074 atgtatcggaaagtatcggataattattttttaaaaaaataaaatttaatatttagatactctccggatacgtatcggaaagtatcgggcaggtatcggt 8064173  T
Q  217 gcatgatacgcagaagatacaatacatcatccattttgaa 256  Q
    ||| |||||||||  |||||  ||| ||||||||||||||    
T  8064174 gcaggatacgcaggggatacggtacgtcatccattttgaa 8064213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 117 - 256
Target Start/End: Complemental strand, 19738850 - 19738711
Alignment:
Q  117 atgtatcagaaagtatcggataattattttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgat 216  Q
    ||||||| ||||||||||||||||||||||         ||||||||||| || ||||||||||   |||| |||||| |||||||  |||||||||| |    
T  19738850 atgtatcggaaagtatcggataattattttttaaaaaaataaaatttaatatttggatactctccggatacgtatcgggaagtatcgggcaggtatcggt 19738751  T
Q  217 gcatgatacgcagaagatacaatacatcatccattttgaa 256  Q
    ||| |||||||||  |||||  ||| ||||||||||||||    
T  19738750 gcaggatacgcaggggatacggtacgtcatccattttgaa 19738711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 119 - 256
Target Start/End: Original strand, 52122836 - 52122973
Alignment:
Q  119 gtatcagaaagtatcggataattattttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgc 218  Q
    ||||| ||||||||| ||||||||||||         ||||||||||| || ||||||||||   |||| |||||| |||||||  |||||||||| |||    
T  52122836 gtatcggaaagtatcagataattattttttaaaaaaataaaatttaatatttggatactctccggatacgtatcgggaagtatcgggcaggtatcggtgc 52122935  T
Q  219 atgatacgcagaagatacaatacatcatccattttgaa 256  Q
    | |||||||||  |||||| ||| ||||||||||||||    
T  52122936 aggatacgcaggggatacagtacgtcatccattttgaa 52122973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 156 - 253
Target Start/End: Original strand, 5325725 - 5325822
Alignment:
Q  156 taaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgcatgatacgcagaagatacaatacatcatccatttt 253  Q
    ||||||||||| || ||||||||||   |||| |||||| |||||||  |||||||||| |||| |||||||||  |||||||||| |||||||||||    
T  5325725 taaaatttaatatttggatactctccagatacgtatcgggaagtatcgggcaggtatcggtgcaggatacgcaggggatacaatacgtcatccatttt 5325822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 28 - 136
Target Start/End: Complemental strand, 51675032 - 51674923
Alignment:
Q  28 tactcaaaacttaagttattttagttaacattaatt-ggaagtatcggggaagatatcaatgcaggataattatcgcatactatcctgatatgtatcaga 126  Q
    ||||||||| |||||||||||||||||||||||||| |||| ||| |  | |||||||  ||||||||||||||   ||||| | ||||||| |||| ||    
T  51675032 tactcaaaaattaagttattttagttaacattaattgggaaatattgaagcagatatccgtgcaggataattataaaatacttttctgatatatatcgga 51674933  T
Q  127 aagtatcgga 136  Q
    ||||||||||    
T  51674932 aagtatcgga 51674923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 120 - 256
Target Start/End: Complemental strand, 53322487 - 53322351
Alignment:
Q  120 tatcagaaagtatcggataattattttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgca 219  Q
    |||| ||||||||||||||||||||||         ||||||||||| || ||||||||||   |||| |||||| |||||||  || ||||||  ||||    
T  53322487 tatcggaaagtatcggataattattttttaaaaaaataaaatttaatatttggatactctccggatacgtatcgggaagtatcgagccggtatcagtgca 53322388  T
Q  220 tgatacgcagaagatacaatacatcatccattttgaa 256  Q
     |||||||| | ||||| |||| ||||||||||||||    
T  53322387 ggatacgcaaaggatacgatacgtcatccattttgaa 53322351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 24784625 - 24784581
Alignment:
Q  18 aacacatcagtactcaaaacttaagttattttagttaacattaat 62  Q
    ||||||||||||||||| | |||||||||||||||||||||||||    
T  24784625 aacacatcagtactcaagagttaagttattttagttaacattaat 24784581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 24823641 - 24823685
Alignment:
Q  18 aacacatcagtactcaaaacttaagttattttagttaacattaat 62  Q
    ||||||||||||||||| | |||||||||||||||||||||||||    
T  24823641 aacacatcagtactcaagagttaagttattttagttaacattaat 24823685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 52721607 - 52721563
Alignment:
Q  18 aacacatcagtactcaaaacttaagttattttagttaacattaat 62  Q
    ||||||||||||||||| | |||||||||||||||||||||||||    
T  52721607 aacacatcagtactcaagagttaagttattttagttaacattaat 52721563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 256
Target Start/End: Original strand, 44521994 - 44522081
Alignment:
Q  169 tcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgcatgatacgcagaagatacaatacatcatccattttgaa 256  Q
    |||||||||||| | |||| ||||||||| |||||  ||| ||||| ||||  ||| |||| ||||| ||||||||||||||||||||    
T  44521994 tcggatactctcctgatacgtatcggaaaatatcaaacagatatcggtgcagaatatgcaggagatataatacatcatccattttgaa 44522081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 187 - 256
Target Start/End: Original strand, 44121877 - 44121946
Alignment:
Q  187 catatcggaaagtatcatgcaggtatcgatgcatgatacgcagaagatacaatacatcatccattttgaa 256  Q
    |||||| | |||||||  |||||||||| |||| |||||||||||||||| |||| || |||||||||||    
T  44121877 catatcaggaagtatcgggcaggtatcggtgcaggatacgcagaagatacgatacgtcgtccattttgaa 44121946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 156 - 201
Target Start/End: Complemental strand, 49069294 - 49069249
Alignment:
Q  156 taaaatttaatcttcggatactctcttaatacatatcggaaagtat 201  Q
    |||||||||||||||| |||||||| ||||||||||| ||||||||    
T  49069294 taaaatttaatcttcgaatactctcctaatacatatcagaaagtat 49069249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 256
Target Start/End: Complemental strand, 4400582 - 4400482
Alignment:
Q  156 taaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgcatgatacgcagaagatacaatacatcatccattttga 255  Q
    ||||||||||| ||| ||||||||| | |||| |||||| ||||||||  || |||||| | |||||||| ||| |||||| ||  ||||| ||||||||    
T  4400582 taaaatttaatattctgatactctcctgatacgtatcgggaagtatcagacaagtatcggttcatgatacacaggagatacgatttatcattcattttga 4400483  T
Q  256 a 256  Q
    |    
T  4400482 a 4400482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 256
Target Start/End: Complemental strand, 5834944 - 5834844
Alignment:
Q  156 taaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgcatgatacgcagaagatacaatacatcatccattttga 255  Q
    ||||||||||| || ||||||||||   |||| |||||| ||| |||  |||||||||| |||| |||||||||  |||||  ||| |||||||||||||    
T  5834944 taaaatttaatatttggatactctcccgatacgtatcgggaagcatcgggcaggtatcggtgcaggatacgcaggggatacggtacgtcatccattttga 5834845  T
Q  256 a 256  Q
    |    
T  5834844 a 5834844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 164 - 256
Target Start/End: Complemental strand, 27982002 - 27981910
Alignment:
Q  164 aatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgcatgatacgcagaagatacaatacatcatccattttgaa 256  Q
    |||||||  |||||||||| |||| ||||| |||||||||  ||| ||||| || | ||| ||||| |||||| |||| ||||||||||||||    
T  27982002 aatcttcaaatactctcttgatacgtatcgaaaagtatcagacagatatcggtggaggatgcgcaggagatacgatacgtcatccattttgaa 27981910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 256
Target Start/End: Complemental strand, 28377110 - 28377010
Alignment:
Q  156 taaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgcatgatacgcagaagatacaatacatcatccattttga 255  Q
    ||||||||||| || ||||||||||    ||| ||||| ||||||||  | |||||||| |||| ||||| ||| |||||| |||| |||||||||||||    
T  28377110 taaaatttaatatttggatactctcccggtacgtatcgaaaagtatcgggtaggtatcggtgcaggatacacaggagatacgatacgtcatccattttga 28377011  T
Q  256 a 256  Q
    |    
T  28377010 a 28377010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 39957941 - 39957897
Alignment:
Q  18 aacacatcagtactcaaaacttaagttattttagttaacattaat 62  Q
    |||||||||||| |||| | |||||||||||||||||||||||||    
T  39957941 aacacatcagtattcaagaattaagttattttagttaacattaat 39957897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 256
Target Start/End: Complemental strand, 47607295 - 47607124
Alignment:
Q  88 gcaggataattatcgcatactatcctgatatgtatcagaaagtatcggataa----ttattttnnnnnnnnntaaaatttaatcttcggatactctctta 183  Q
    |||| |||||||||| |||||||||||||| ||||| | ||||||| |||||    ||||||          ||||||||||||||| ||| ||||| |     
T  47607295 gcagaataattatcggatactatcctgatacgtatcgggaagtatcagataattttttatttattttttaaataaaatttaatcttcagatgctctcctg 47607196  T
Q  184 atacatatcggaaagtatcatgcaggtatcgatgcatgatacgcagaagatacaatacatcatccattttgaa 256  Q
    |||| |||| | || ||||| |||| ||||| |||| ||||||||| |||||| |||  ||||||||||||||    
T  47607195 atacgtatcaggaaatatcaggcagatatcg-tgcaggatacgcaggagatacgatatgtcatccattttgaa 47607124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 722493 - 722575
Alignment:
Q  16 ataacacatcagtactcaaaacttaagttattttagttaacattaattgg-aagtatcggggaagatatcaatgcaggataat 97  Q
    ||||||||||| ||| ||| | |||||||| ||||||||||||||| ||| |||||||||||  ||||||  || ||||||||    
T  722493 ataacacatcaatacacaagagttaagttagtttagttaacattaaatggtaagtatcggggcggatatcggtgtaggataat 722575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 156 - 201
Target Start/End: Complemental strand, 21637779 - 21637734
Alignment:
Q  156 taaaatttaatcttcggatactctcttaatacatatcggaaagtat 201  Q
    ||||||||||||||||||||||||| | |||| |||||| ||||||    
T  21637779 taaaatttaatcttcggatactctcctgatacgtatcgggaagtat 21637734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 169 - 253
Target Start/End: Complemental strand, 51858933 - 51858849
Alignment:
Q  169 tcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgc-atgatacgcagaagatacaatacatcatccatttt 253  Q
    |||||||||||| | |||| |||||| ||||||||  ||||||||| ||| | ||||||||| |||||| |||| |||||||||||    
T  51858933 tcggatactctcctgatacgtatcgggaagtatcagacaggtatcg-tgcaaggatacgcaggagatacgatacgtcatccatttt 51858849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 168 - 256
Target Start/End: Complemental strand, 1177083 - 1176995
Alignment:
Q  168 ttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgcatgatacgcagaagatacaatacatcatccattttgaa 256  Q
    ||||||||||||  | |||||||||||||||||||  |||||||| | |||| |||||| ||  ||||| |||| ||| | ||||||||    
T  1177083 ttcggatactcttctgatacatatcggaaagtatcgggcaggtatgggtgcaggatacgtaggggatacgatacgtcaactattttgaa 1176995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 256
Target Start/End: Complemental strand, 10257774 - 10257714
Alignment:
Q  196 aagtatcatgcaggtatcgatgcatgatacgcagaagatacaatacatcatccattttgaa 256  Q
    |||||||  |||||||||||| ||  ||||||||  ||||| |||||||||||||||||||    
T  10257774 aagtatcgggcaggtatcgatacagaatacgcagcggatacgatacatcatccattttgaa 10257714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 256
Target Start/End: Original strand, 42472573 - 42472673
Alignment:
Q  156 taaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgcatgatacgcagaagatacaatacatcatccattttga 255  Q
    ||||||||||| || ||||||||||   |||| ||| || |||||||  ||| |||||| |||| |||||||||   ||||| ||| |||||||||||||    
T  42472573 taaaatttaatatttggatactctccggatacgtattgggaagtatcgggcaagtatcggtgcaggatacgcagggaatacagtacgtcatccattttga 42472672  T
Q  256 a 256  Q
    |    
T  42472673 a 42472673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 89; Significance: 6e-43; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 18 - 256
Target Start/End: Original strand, 44960000 - 44960239
Alignment:
Q  18 aacacatcagtactcaaaacttaagttattttagttaacattaatt-ggaagtatcggggaagatatcaatgcaggataattatcgcatactatcctgat 116  Q
    ||||||||||||||||| | |||||||||||||||||||||||||| |||| || ||||| || ||||| ||||| |||||||||| |||||  ||||||    
T  44960000 aacacatcagtactcaagagttaagttattttagttaacattaattgggaaataccggggtaggtatcagtgcagaataattatcggatactcccctgat 44960099  T
Q  117 atgtatcagaaagtatcggataattattttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgat 216  Q
    ||||||| | ||||||| ||||||||||||         |||||||||||||| |||||||||  | ||||||||||| ||||||||  ||||| ||  |    
T  44960100 atgtatcgggaagtatccgataattatttttacaaaaaataaaatttaatctttggatactcttctgatacatatcgggaagtatcagacaggtgtcagt 44960199  T
Q  217 gcatgatacgcagaagatacaatacatcatccattttgaa 256  Q
    ||| |||||||||  ||||| |||| ||||||||||||||    
T  44960200 gcaggatacgcaggggatacgatacgtcatccattttgaa 44960239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 28 - 256
Target Start/End: Complemental strand, 24956491 - 24956262
Alignment:
Q  28 tactcaaaacttaagttattttagttaacattaattgg-aagtatcggggaagatatcaatgcaggataattatcgcatactatcctgatatgtatcaga 126  Q
    ||||||| | |||||||||||||||||||||||||||| |||||| | || || ||||  |||||||||||||||  ||||| || ||||| |||| ||     
T  24956491 tactcaagagttaagttattttagttaacattaattgggaagtattgtggcaggtatcggtgcaggataattatcagatactctcttgatacgtattagg 24956392  T
Q  127 aagtatcggataattattttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgcatgatacg 226  Q
    ||||||||||||||||||||         ||||||||||||||||||||||||||| |||| ||||||||||||||| ||| ||||| |||||||||| |    
T  24956391 aagtatcggataattatttttctttaaaataaaatttaatcttcggatactctcttgatacgtatcggaaagtatcaggcatgtatcaatgcatgatatg 24956292  T
Q  227 cagaagatacaatacatcatccattttgaa 256  Q
     ||  ||||| |||| ||||| ||||||||    
T  24956291 taggggatacgatacgtcatcaattttgaa 24956262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 18 - 257
Target Start/End: Complemental strand, 40041628 - 40041389
Alignment:
Q  18 aacacatcagtactcaaaacttaagttattttagttaacattaattgg-aagtatcggggaagatatcaatgcaggataattatcgcatactatcctgat 116  Q
    ||||||||||||||||| | |||| ||||||||||||||||||||||| || |||||||| || ||||| |||||||||||||||| ||||| |||||||    
T  40041628 aacacatcagtactcaatagttaaattattttagttaacattaattgggaaatatcggggcaggtatcagtgcaggataattatcggatactctcctgat 40041529  T
Q  117 atgtatcagaaagtatcggataattattttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgat 216  Q
    | ||||| | || |||||||||||||||||         ||||||||||||||||||||||||| | |||| ||||   ||||||||  || |||||  |    
T  40041528 acgtatcgggaaatatcggataattatttt-ttttaaaataaaatttaatcttcggatactctcctgatacgtatcaagaagtatcagacatgtatcagt 40041430  T
Q  217 gcatgatacgcagaagatacaatacatcatccattttgaaa 257  Q
     || |||||| || |||||| |||||||||| |||||||||    
T  40041429 acaggatacgtaggagatacgatacatcatctattttgaaa 40041389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 18 - 256
Target Start/End: Complemental strand, 35160114 - 35159876
Alignment:
Q  18 aacacatcagtactcaaaacttaagttattttagttaacattaattg-gaagtatcggggaagatatcaatgcaggataattatcgcatactatcctgat 116  Q
    ||||||||||||||||| | |||| |||||||| ||||||||||||| |||||||||||| |||||||| || | ||| ||||||| ||||| | |||||    
T  35160114 aacacatcagtactcaagagttaaattattttaattaacattaattgagaagtatcggggcagatatcagtgaaagat-attatcggatactcttctgat 35160016  T
Q  117 atgtatcagaaagtatcggataattattttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgat 216  Q
    ||||||| | || |||| ||||||||||||         ||||||||||||||||||||||||| | |||| |||||| |||||| |  || |||||| |    
T  35160015 atgtatcgggaactatcagataattatttttttttaaaataaaatttaatcttcggatactctcctgatacgtatcgggaagtattagacaagtatcggt 35159916  T
Q  217 gcatgatacgcagaagatacaatacatcatccattttgaa 256  Q
    |||  ||| ||||  ||||| |||||||||||||||||||    
T  35159915 gcagaatatgcaggggatacgatacatcatccattttgaa 35159876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 28 - 257
Target Start/End: Original strand, 23970001 - 23970231
Alignment:
Q  28 tactcaaaacttaagttattttagttaacattaattg-gaagtatcggggaagatatcaatgcaggataattatcgcatactatcctgatatgtatcaga 126  Q
    ||||||| | ||||||||||||| ||||||||||||| |||||||  ||| |  |||   |||||||||||||||| ||||| |||||||| ||||| ||    
T  23970001 tactcaagagttaagttattttaattaacattaattgagaagtattagggcatgtattggtgcaggataattatcggatactctcctgatacgtatcgga 23970100  T
Q  127 aagtatcggataattattttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgcatgatacg 226  Q
    ||||||||| ||||||||||         ||||||||||||||| ||||||||  |||||| |||| | ||||||||  ||| |||||||||||||||||    
T  23970101 aagtatcgggtaattattttttaagaaaataaaatttaatcttcagatactcttctaatacgtatcaggaagtatcagacagatatcgatgcatgatacg 23970200  T
Q  227 cagaagatacaatacatcatccattttgaaa 257  Q
    |||  |||| ||||| ||||||||| |||||    
T  23970201 caggggatataatacgtcatccattatgaaa 23970231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 19 - 145
Target Start/End: Original strand, 36757882 - 36758009
Alignment:
Q  19 acacatcagtactcaaaacttaagttattttagttaacattaatt-ggaagtatcggggaagatatcaatgcaggataattatcgcatactatcctgata 117  Q
    |||||||||||||||| | |||||||||||||||||||||||||| ||||||||| ||| |||||||| || | ||||||||||| ||||| ||||||||    
T  36757882 acacatcagtactcaagagttaagttattttagttaacattaattgggaagtatcagggcagatatcagtgaaagataattatcggatactctcctgata 36757981  T
Q  118 tgtatcagaaagtatcggataattattt 145  Q
     ||||| | |||||| ||||||||||||    
T  36757982 cgtatcgggaagtattggataattattt 36758009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 19 - 145
Target Start/End: Original strand, 36767406 - 36767533
Alignment:
Q  19 acacatcagtactcaaaacttaagttattttagttaacattaatt-ggaagtatcggggaagatatcaatgcaggataattatcgcatactatcctgata 117  Q
    |||||||||||||||| | |||||||||||||||||||||||||| ||||||||| ||| |||||||| || | ||||||||||| ||||| ||||||||    
T  36767406 acacatcagtactcaagagttaagttattttagttaacattaattgggaagtatcagggcagatatcagtgaaagataattatcggatactctcctgata 36767505  T
Q  118 tgtatcagaaagtatcggataattattt 145  Q
     ||||| | |||||| ||||||||||||    
T  36767506 cgtatcgggaagtattggataattattt 36767533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 28 - 253
Target Start/End: Complemental strand, 21409630 - 21409405
Alignment:
Q  28 tactcaaaacttaagttattttagttaacattaattgg-aagtatcggggaagatatcaatgcaggataattatcgcatactatcctgatatgtatcaga 126  Q
    ||||||| | |||||||||||||||||||||||||||| |||||| |||| || ||||  || ||||||||||||  ||||| |||||||| |||| ||     
T  21409630 tactcaagagttaagttattttagttaacattaattggaaagtattggggcaggtatcggtgtaggataattatcagatactctcctgatacgtattagg 21409531  T
Q  127 aagtatcggataattattttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgcatgatacg 226  Q
    ||||||| ||||||||||||         |||||||||||||| |||||||||| | |||| |||||| | |||||| |||||||||  |||| ||||      
T  21409530 aagtatccgataattatttt-taaaaaaataaaatttaatctttggatactctcctgatacgtatcgggatgtatcaggcaggtatcagtgcaggatata 21409432  T
Q  227 cagaagatacaatacatcatccatttt 253  Q
    ||| |||||| |||| |||||||||||    
T  21409431 caggagatacgatacgtcatccatttt 21409405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 19 - 117
Target Start/End: Original strand, 36763662 - 36763761
Alignment:
Q  19 acacatcagtactcaaaacttaagttattttagttaacattaatt-ggaagtatcggggaagatatcaatgcaggataattatcgcatactatcctgata 117  Q
    |||||||||||||||| | |||||||||||||||||||||||||| ||||||||||||| |||||||| || | ||||||||||| ||||| ||||||||    
T  36763662 acacatcagtactcaagagttaagttattttagttaacattaattgggaagtatcggggcagatatcagtgaaagataattatcggatactctcctgata 36763761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 28 - 180
Target Start/End: Original strand, 554765 - 554918
Alignment:
Q  28 tactcaaaacttaagttattttagttaacattaattgg-aagtatcggggaagatatcaatgcaggataattatcgcatactatcctgatatgtatcaga 126  Q
    ||||||| | |||||||||||||||||||||| ||||| |||||| |||| || ||||  |||||||||||||||| ||||| ||||||||  |||| |     
T  554765 tactcaagagttaagttattttagttaacattgattgggaagtattggggcaggtatcggtgcaggataattatcggatactctcctgatacttatcggg 554864  T
Q  127 aagtatcggataattattttnnnnnnnnntaaaatttaatcttcggatactctc 180  Q
    ||||||||||||||||||||         |||||||||||||||| ||||||||    
T  554865 aagtatcggataattatttttaaaaaaaataaaatttaatcttcgaatactctc 554918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 18 - 192
Target Start/End: Complemental strand, 21180086 - 21179911
Alignment:
Q  18 aacacatcagtactcaaaacttaagttattttagttaacattaattgg-aagtatcggggaagatatcaatgcaggataattatcgcatactatcctgat 116  Q
    ||||||||||||||||| | ||||||||||||||||| |||||  ||| || ||| |||| || |||  ||||| ||||||||||  ||||| |||||||    
T  21180086 aacacatcagtactcaagagttaagttattttagttatcattagctgggaaatattggggcaggtattgatgcatgataattatcagatactctcctgat 21179987  T
Q  117 atgtatcagaaagtatcggataattattttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatc 192  Q
    | ||||| | |||||||||||||||||| |         ||||||||||||||||||||||||| | |||||||||    
T  21179986 acgtatcgggaagtatcggataattattattttttaaaataaaatttaatcttcggatactctcctgatacatatc 21179911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 135
Target Start/End: Original strand, 15878289 - 15878407
Alignment:
Q  18 aacacatcagtactcaaaacttaagttattttagttaacattaatt-ggaagtatcggggaagatatcaatgcaggataattatcgcatactatcctgat 116  Q
    ||||||||| ||||||| | |||||||||||||||||| ||||||| ||||||||||||| ||||| |  || |||||||| |||| ||||| |||||||    
T  15878289 aacacatcaatactcaagagttaagttattttagttaatattaattgggaagtatcggggcagataccggtgtaggataatgatcggatactctcctgat 15878388  T
Q  117 atgtatcagaaagtatcgg 135  Q
    | ||||| |||||||||||    
T  15878389 acgtatcggaaagtatcgg 15878407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 156 - 256
Target Start/End: Original strand, 1043075 - 1043175
Alignment:
Q  156 taaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgcatgatacgcagaagatacaatacatcatccattttga 255  Q
    ||||||||||| || ||||||||||   |||| ||||||||||||||| ||||||||||||||| |||||||||  ||||| |||| |||||||||||||    
T  1043075 taaaatttaatatttggatactctcccgatacgtatcggaaagtatcaggcaggtatcgatgcaggatacgcaggggatacgatacgtcatccattttga 1043174  T
Q  256 a 256  Q
    |    
T  1043175 a 1043175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 16 - 146
Target Start/End: Original strand, 1400131 - 1400262
Alignment:
Q  16 ataacacatcagtactcaaaacttaagttattttagttaacattaatt-ggaagtatcggggaagatatcaatgcaggataattatcgcatactatcctg 114  Q
    ||||||||||| |||| || | ||||||||||||| |||||||||||| ||||||||||||| |||||    || |||||||| |||| ||||| |||||    
T  1400131 ataacacatcaatacttaagagttaagttattttaattaacattaattgggaagtatcggggcagatacatgtgtaggataatgatcggatactctcctg 1400230  T
Q  115 atatgtatcagaaagtatcggataattatttt 146  Q
    ||| ||||| | ||||||| ||||||||||||    
T  1400231 atacgtatcgggaagtatcagataattatttt 1400262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 117 - 256
Target Start/End: Complemental strand, 34238308 - 34238169
Alignment:
Q  117 atgtatcagaaagtatcggataattattttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgat 216  Q
    ||||||| ||||||||||||||||||||||         ||||||||||| || ||||||||||  ||||| ||||||||||||||  |||||||||| |    
T  34238308 atgtatcggaaagtatcggataattattttttttaaaaataaaatttaatatttggatactctccgaatacgtatcggaaagtatcgggcaggtatcggt 34238209  T
Q  217 gcatgatacgcagaagatacaatacatcatccattttgaa 256  Q
    |||  ||||||||  |||||  ||| ||||||||||||||    
T  34238208 gcagaatacgcaggggatacggtacgtcatccattttgaa 34238169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 38 - 203
Target Start/End: Complemental strand, 44269955 - 44269789
Alignment:
Q  38 ttaagttattttagttaacattaattg-gaagtatcggggaagatatcaatgcaggataattatcgcatactatcctgatatgtatcagaaagtatcgga 136  Q
    |||||||||||||||||||||| |||| ||| ||||| || ||||||| ||| || |||||||||  ||||| || ||||| ||||| | |||||||||     
T  44269955 ttaagttattttagttaacatttattgtgaaatatcgaggcagatatcgatgtagaataattatcagatactttcttgatacgtatcgggaagtatcggt 44269856  T
Q  137 taattattttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatca 203  Q
    ||||||||||         ||||||||||||||| ||||||||  | |||| ||||| |||||||||    
T  44269855 taattatttttttaaaaattaaaatttaatcttcagatactctactgatacgtatcgaaaagtatca 44269789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 119 - 256
Target Start/End: Complemental strand, 38263147 - 38263010
Alignment:
Q  119 gtatcagaaagtatcggataattattttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgc 218  Q
    ||||| ||||||||| ||||||||||||         ||||||||||| || ||||||||||   |||| ||||||||||||||  ||||||||||||||    
T  38263147 gtatcggaaagtatcagataattattttttaaaaaaataaaatttaatatttggatactctccggatacgtatcggaaagtatcgggcaggtatcgatgc 38263048  T
Q  219 atgatacgcagaagatacaatacatcatccattttgaa 256  Q
    | ||||||||||  ||||  ||| ||||||||||||||    
T  38263047 aggatacgcagagaatacggtacgtcatccattttgaa 38263010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 18 - 257
Target Start/End: Complemental strand, 33454320 - 33454080
Alignment:
Q  18 aacacatcagtactcaaaacttaagttattttagttaacattaatt-ggaagtatcggggaagatatcaatgcaggataattatcgcatactatcctgat 116  Q
    ||||||| ||||||||| | ||||||| ||||||| |||||||||| |||| |||||||| |  ||||  || ||||||||||||| ||||| | || ||    
T  33454320 aacacataagtactcaagagttaagtttttttagtcaacattaattgggaaatatcggggcaagtatcggtgtaggataattatcgaatactcttctaat 33454221  T
Q  117 atgtatcagaaagtatcggataattattttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgat 216  Q
    | ||||  | ||||||| | ||||||||||         |||||||||||||||||||||| || | |||| |||||  |||||||   ||  ||||  |    
T  33454220 aagtattgggaagtatcagctaattatttttttaaaaaataaaatttaatcttcggatactttcctgatacgtatcgagaagtatctgacatatatcagt 33454121  T
Q  217 gcatgatacgcagaagatacaatacatcatccattttgaaa 257  Q
    ||| |||||||||  ||||| |||| |||||||||||||||    
T  33454120 gcaggatacgcaggggatacgatacgtcatccattttgaaa 33454080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 125 - 256
Target Start/End: Original strand, 26845869 - 26846000
Alignment:
Q  125 gaaagtatcggataattattttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgcatgata 224  Q
    ||||||||||||||||||||||         ||||||||||| || ||||||||||  ||||| |||||| ||||||   |||||||||| |||| ||||    
T  26845869 gaaagtatcggataattattttttttaaaaataaaatttaatatttggatactctccaaatacgtatcgggaagtattgggcaggtatcggtgcaggata 26845968  T
Q  225 cgcagaagatacaatacatcatccattttgaa 256  Q
    ||||  ||||||  ||||||||||||||||||    
T  26845969 cgcatgagatacggtacatcatccattttgaa 26846000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 117 - 256
Target Start/End: Complemental strand, 40095800 - 40095661
Alignment:
Q  117 atgtatcagaaagtatcggataattattttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgat 216  Q
    ||||||| ||||||||||||||||||||||         ||||||||||| ||  |||||||||   |||| ||||||||||||||  |||||||||| |    
T  40095800 atgtatcggaaagtatcggataattattttttaaaaaaataaaatttaatatttagatactctccggatacgtatcggaaagtatcgggcaggtatcggt 40095701  T
Q  217 gcatgatacgcagaagatacaatacatcatccattttgaa 256  Q
    ||| |||||||||  |||||  ||| ||||||||||||||    
T  40095700 gcaggatacgcaggggatacggtacgtcatccattttgaa 40095661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 135
Target Start/End: Original strand, 23078974 - 23079092
Alignment:
Q  18 aacacatcagtactcaaaacttaagttattttagttaacattaatt-ggaagtatcggggaagatatcaatgcaggataattatcgcatactatcctgat 116  Q
    |||||||||||||| || | ||||||||||||| |||||||||||| |||| |||||||  || ||||  | |||||||| ||||| ||||| |||||||    
T  23078974 aacacatcagtacttaagagttaagttattttaattaacattaattgggaaatatcgggacaggtatcggtacaggataactatcggatactctcctgat 23079073  T
Q  117 atgtatcagaaagtatcgg 135  Q
    | ||||| | |||||||||    
T  23079074 acgtatcgggaagtatcgg 23079092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 156 - 256
Target Start/End: Original strand, 9250426 - 9250526
Alignment:
Q  156 taaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgcatgatacgcagaagatacaatacatcatccattttga 255  Q
    ||||||||||| || ||||||||||   |||| |||||| |||||||  |||||||||| |||| |||||||||  ||||| |||| |||||||||||||    
T  9250426 taaaatttaatatttggatactctccggatacgtatcgggaagtatcgggcaggtatcggtgcaggatacgcaggggatacgatacgtcatccattttga 9250525  T
Q  256 a 256  Q
    |    
T  9250526 a 9250526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 156 - 256
Target Start/End: Complemental strand, 25969508 - 25969408
Alignment:
Q  156 taaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgcatgatacgcagaagatacaatacatcatccattttga 255  Q
    ||||||||||| || ||||||||||   |||| |||||| |||||||  |||||||||| |||| |||||||||  ||||| |||| |||||||||||||    
T  25969508 taaaatttaatatttggatactctccggatacgtatcgggaagtatcgggcaggtatcggtgcaggatacgcaggggatacgatacgtcatccattttga 25969409  T
Q  256 a 256  Q
    |    
T  25969408 a 25969408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 117 - 256
Target Start/End: Complemental strand, 27354071 - 27353932
Alignment:
Q  117 atgtatcagaaagtatcggataattattttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgat 216  Q
    ||||||| ||||||||||||||||||||||         ||||||||||| || ||||||||||   |||| |||||| |||||||  |||||||||| |    
T  27354071 atgtatcggaaagtatcggataattattttttaaaaaaataaaatttaatatttggatactctccggatacgtatcgggaagtatcgggcaggtatcggt 27353972  T
Q  217 gcatgatacgcagaagatacaatacatcatccattttgaa 256  Q
    ||| |||||||||   ||||  ||| ||||||||||||||    
T  27353971 gcaggatacgcagggaatacggtacgtcatccattttgaa 27353932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 156 - 256
Target Start/End: Original strand, 34122621 - 34122721
Alignment:
Q  156 taaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgcatgatacgcagaagatacaatacatcatccattttga 255  Q
    ||||||||||| || ||||||||||   |||| |||||| |||||||  |||||||||| |||| |||||||||| |||||  ||| |||||||||||||    
T  34122621 taaaatttaatatttggatactctccagatacgtatcgggaagtatcgggcaggtatcggtgcaggatacgcagaggatacggtacgtcatccattttga 34122720  T
Q  256 a 256  Q
    |    
T  34122721 a 34122721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 117 - 256
Target Start/End: Complemental strand, 48163558 - 48163419
Alignment:
Q  117 atgtatcagaaagtatcggataattattttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgat 216  Q
    ||||||| ||||||||||||||||||||||         ||||||||||| || ||||||||||   |||| |||||| |||||||  |||||||||| |    
T  48163558 atgtatcggaaagtatcggataattattttttaaaaaaataaaatttaatatttggatactctccggatacgtatcgggaagtatcgggcaggtatcggt 48163459  T
Q  217 gcatgatacgcagaagatacaatacatcatccattttgaa 256  Q
    ||| |||||||||  |||||  ||| ||| ||||||||||    
T  48163458 gcaggatacgcaggggatacggtacgtcacccattttgaa 48163419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 198 - 256
Target Start/End: Complemental strand, 7416693 - 7416635
Alignment:
Q  198 gtatcatgcaggtatcgatgcatgatacgcagaagatacaatacatcatccattttgaa 256  Q
    |||||| |||| |||||||||| |||||  |||||||||||||||||||||||||||||    
T  7416693 gtatcaggcagatatcgatgcaagatacatagaagatacaatacatcatccattttgaa 7416635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 119 - 256
Target Start/End: Complemental strand, 11829837 - 11829700
Alignment:
Q  119 gtatcagaaagtatcggataattattttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgc 218  Q
    ||||| ||||||||||||||||||||||         ||||||||||| || ||||||||||   |||| ||| || |||||||| |||| ||||| |||    
T  11829837 gtatcggaaagtatcggataattattttttttaaaaataaaatttaatatttggatactctccggatacgtattgggaagtatcaggcagatatcggtgc 11829738  T
Q  219 atgatacgcagaagatacaatacatcatccattttgaa 256  Q
    | |||||||||  |||||  ||| ||||||||||||||    
T  11829737 aggatacgcaggggatacggtacgtcatccattttgaa 11829700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 156 - 202
Target Start/End: Original strand, 19820868 - 19820914
Alignment:
Q  156 taaaatttaatcttcggatactctcttaatacatatcggaaagtatc 202  Q
    ||||||||||||||||||||||||| | |||||||||||||||||||    
T  19820868 taaaatttaatcttcggatactctcctgatacatatcggaaagtatc 19820914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 159 - 253
Target Start/End: Complemental strand, 38064703 - 38064609
Alignment:
Q  159 aatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgcatgatacgcagaagatacaatacatcatccatttt 253  Q
    |||||||||||||||||||||| | |||| ||||||||||||||   ||||||||  |||||||||||||  ||||||  ||  |||||||||||    
T  38064703 aatttaatcttcggatactctcctgatacgtatcggaaagtatcggtcaggtatcagtgcatgatacgcatgagatacgttatgtcatccatttt 38064609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 117 - 257
Target Start/End: Complemental strand, 16850936 - 16850796
Alignment:
Q  117 atgtatcagaaagtatcggataattattttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgat 216  Q
    ||||||| ||||||||||||||||||||||         ||||||||||| || |||||||||    |||| ||||||||||||||  ||| |||||| |    
T  16850936 atgtatcggaaagtatcggataattatttttttaaaaaataaaatttaatatttggatactcttcagatacgtatcggaaagtatcgggcaagtatcggt 16850837  T
Q  217 gcatgatacgcagaagatacaatacatcatccattttgaaa 257  Q
    ||||||||| |||   ||||  ||| |||||||||||||||    
T  16850836 gcatgatacacagggaatacggtacgtcatccattttgaaa 16850796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 156 - 253
Target Start/End: Original strand, 27398051 - 27398148
Alignment:
Q  156 taaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgcatgatacgcagaagatacaatacatcatccatttt 253  Q
    ||||||||||| || ||||||||||   |||||||| ||||||||||  |||||||||  |||| |||||||||  |||||| ||| |||||||||||    
T  27398051 taaaatttaatatttggatactctccggatacatattggaaagtatcgagcaggtatcagtgcaggatacgcaggggatacagtacgtcatccatttt 27398148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 196
Target Start/End: Complemental strand, 38064916 - 38064736
Alignment:
Q  18 aacacatcagtactcaaaacttaagttattttagtt-aacattaattgg-aagtatcggggaagatatcaatgcaggataattatcgcatactatcctga 115  Q
    ||||||| ||||||||||| |||||||||||||||| || ||||||||| || || ||||| || |||   |||||||||||||||  ||||  ||| ||    
T  38064916 aacacattagtactcaaaagttaagttattttagtttaatattaattgggaaataacggggtaggtattggtgcaggataattatcagataccctccaga 38064817  T
Q  116 tatgtatcagaaagtatcggataattattttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaa 196  Q
    || ||||  | || |||| ||||||| || |         ||||||||||||||||||||||||||| |||| ||||||||    
T  38064816 tacgtattgggaaatatctgataatttttattttaaaaaataaaatttaatcttcggatactctcttgatacgtatcggaa 38064736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 156 - 256
Target Start/End: Original strand, 18113943 - 18114043
Alignment:
Q  156 taaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgcatgatacgcagaagatacaatacatcatccattttga 255  Q
    ||||||||||||||| ||||||||| | ||||||||| | |||||||| |||| ||||| |||| |||||  ||| ||||   ||| |||||||||||||    
T  18113943 taaaatttaatcttcagatactctcctgatacatatcaggaagtatcaggcagatatcggtgcaggatacatagaggatatggtacgtcatccattttga 18114042  T
Q  256 a 256  Q
    |    
T  18114043 a 18114043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 117 - 256
Target Start/End: Original strand, 27555334 - 27555473
Alignment:
Q  117 atgtatcagaaagtatcggataattattttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgat 216  Q
    ||||||| ||||||||||||||||||||||         ||||||||||| || ||||||||||   |||| |||||| |||||||   ||||||||| |    
T  27555334 atgtatcggaaagtatcggataattattttttaaaaaaataaaatttaatatttggatactctccggatacgtatcgggaagtatcggacaggtatcggt 27555433  T
Q  217 gcatgatacgcagaagatacaatacatcatccattttgaa 256  Q
    |||  |||||||||  ||||  ||| ||||||||||||||    
T  27555434 gcagaatacgcagagaatacggtacgtcatccattttgaa 27555473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 47719953 - 47719997
Alignment:
Q  18 aacacatcagtactcaaaacttaagttattttagttaacattaat 62  Q
    ||||||||||||||||| | |||||||||||||||||||||||||    
T  47719953 aacacatcagtactcaagagttaagttattttagttaacattaat 47719997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 203
Target Start/End: Complemental strand, 23311833 - 23311786
Alignment:
Q  156 taaaatttaatcttcggatactctcttaatacatatcggaaagtatca 203  Q
    ||||||||||||||||||||||||| | ||||||||||| ||||||||    
T  23311833 taaaatttaatcttcggatactctcctgatacatatcgggaagtatca 23311786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 64
Target Start/End: Complemental strand, 11058698 - 11058652
Alignment:
Q  18 aacacatcagtactcaaaacttaagttattttagttaacattaattg 64  Q
    ||||||||||||| ||| | |||||||||||||||||||||||||||    
T  11058698 aacacatcagtacacaagagttaagttattttagttaacattaattg 11058652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 256
Target Start/End: Complemental strand, 11058463 - 11058363
Alignment:
Q  156 taaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgcatgatacgcagaagatacaatacatcatccattttga 255  Q
    |||||||||||  || |||||||||  ||||| |||| ||||||||||  ||| ||||| |||| |||||||||  |||||  ||| |||||||||||||    
T  11058463 taaaatttaataatctgatactctcccaatacgtatctgaaagtatcagacagatatcggtgcaggatacgcaggggatacggtacgtcatccattttga 11058364  T
Q  256 a 256  Q
    |    
T  11058363 a 11058363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 28 - 108
Target Start/End: Complemental strand, 48153785 - 48153704
Alignment:
Q  28 tactcaaaacttaagttattttagttaacattaatt-ggaagtatcggggaagatatcaatgcaggataattatcgcatact 108  Q
    ||||||| | ||||||||||||| |||||||||||| |||||||| |||| || |||   |||| ||||||||||| |||||    
T  48153785 tactcaagagttaagttattttaattaacattaattgggaagtattggggcaggtattggtgcaagataattatcgaatact 48153704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 200
Target Start/End: Original strand, 8056338 - 8056382
Alignment:
Q  156 taaaatttaatcttcggatactctcttaatacatatcggaaagta 200  Q
    ||||||||||||||| ||||||||| | |||| ||||||||||||    
T  8056338 taaaatttaatcttcagatactctcctgatacgtatcggaaagta 8056382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 256
Target Start/End: Complemental strand, 19510634 - 19510534
Alignment:
Q  156 taaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgcatgatacgcagaagatacaatacatcatccattttga 255  Q
    ||||||||||| || |||||||| |   ||||||||| | |||||||  ||| |||||  |||||||||| |||  ||||| |||| |||||||||||||    
T  19510634 taaaatttaatatttggatactcacccgatacatatcaggaagtatcgggcatgtatcagtgcatgatacacaggggatacgatacgtcatccattttga 19510535  T
Q  256 a 256  Q
    |    
T  19510534 a 19510534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 89; Significance: 6e-43; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 18 - 253
Target Start/End: Original strand, 41675855 - 41676090
Alignment:
Q  18 aacacatcagtactcaaaacttaagttattttagttaacattaattggaagtatcggggaagatatcaatgcaggataattatcgcatactatcctgata 117  Q
    ||||||||||||||||| | ||||||||||||| |||||||||||||| |||||||||| ||||| |  || |||||||| |||| ||||| ||||||||    
T  41675855 aacacatcagtactcaagagttaagttattttaattaacattaattgggagtatcggggcagataccggtgtaggataatgatcggatactctcctgata 41675954  T
Q  118 tgtatcagaaagtatcggataattattttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatg 217  Q
     ||||| | |||||| |||||||||||||         ||||||||||||||||||||||||   |||||||||  | |||||||   ||||||||| ||    
T  41675955 agtatcgggaagtattggataattattttttaaaaaaataaaatttaatcttcggatactcttccaatacatattaggaagtatcggacaggtatcggtg 41676054  T
Q  218 catgatacgcagaagatacaatacatcatccatttt 253  Q
    |||||||||||| ||||||  ||| |||||||||||    
T  41676055 catgatacgcaggagatacggtacgtcatccatttt 41676090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 28 - 256
Target Start/End: Complemental strand, 29168190 - 29167961
Alignment:
Q  28 tactcaaaacttaagttattttagttaacattaattgg-aagtatcggggaagatatcaatgcaggataattatcgcatactatcctgatatgtatcaga 126  Q
    ||||||| | |||||||||||||||||| ||||||||| |||||| |||| || ||||| |||||||||||||| |  |||| |||| ||| ||||| |     
T  29168190 tactcaatagttaagttattttagttaatattaattgggaagtattggggtaggtatcagtgcaggataattattgggtactctcctcatacgtatcggg 29168091  T
Q  127 aagtatcggataattattttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgcatgatacg 226  Q
    ||||||| ||||||||||||         | ||||||||||||||||||||||| | |||| || ||| ||||||||||||||||||| |||| ||||||    
T  29168090 aagtatcagataattattttttaaaaaaattaaatttaatcttcggatactctcctgatacgtaacgggaagtatcatgcaggtatcggtgcaggatacg 29167991  T
Q  227 cagaagatacaatacatcatccattttgaa 256  Q
    |||  ||||  |||| ||||||||||||||    
T  29167990 caggggatatgatacgtcatccattttgaa 29167961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 27 - 256
Target Start/End: Complemental strand, 9781886 - 9781656
Alignment:
Q  27 gtactcaaaacttaagttattttagttaacattaattgg-aagtatcggggaagatatcaatgcaggataattatcgcatactatcctgatatgtatcag 125  Q
    |||||||| | ||||||||||||| ||||| |||||||| || ||| |||| || |||   |||||||||||||||| ||||| |||||||| ||||| |    
T  9781886 gtactcaagagttaagttattttatttaacgttaattgggaattattggggcaggtataggtgcaggataattatcggatactttcctgatacgtatcgg 9781787  T
Q  126 aaagtatcggataattattttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgcatgatac 225  Q
     ||||||||||||||||||||          |||| ||||||||||||||||||  | |||| ||||||||||||||  |||||||||| |||| |||||    
T  9781786 gaagtatcggataattattttaaaaaaaaaaaaaaattaatcttcggatactcttctgatacgtatcggaaagtatcgggcaggtatcggtgcaggatac 9781687  T
Q  226 gcagaagatacaatacatcatccattttgaa 256  Q
    ||||  ||||| |||| ||| ||||||||||    
T  9781686 gcaggggatacgatacgtcaaccattttgaa 9781656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 64 - 256
Target Start/End: Original strand, 48715137 - 48715329
Alignment:
Q  64 ggaagtatcggggaagatatcaatgcaggataattatcgcatactatcctgatatgtatcagaaagtatcggataattattttnnnnnnnnntaaaattt 163  Q
    |||||||||||||||||||||| | || ||||||||||  ||||| || ||||||||||| | ||||||| ||||||||||||         ||||||||    
T  48715137 ggaagtatcggggaagatatcagtacatgataattatcagatactctcttgatatgtatcgggaagtatctgataattattttttaaaacaataaaattt 48715236  T
Q  164 aatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgcatgatacgcagaagatacaatacatcatccattttgaa 256  Q
    |||||||||| |||||| | |||| |||||| |||||||  || ||||||| || | ||||||||| |||||| |||||  ||||||||||||    
T  48715237 aatcttcggacactctcctgatacgtatcgggaagtatcgggccggtatcggtgtaggatacgcaggagatacgatacaatatccattttgaa 48715329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 20 - 194
Target Start/End: Original strand, 24589991 - 24590166
Alignment:
Q  20 cacatcagtactcaaaacttaagttattttagttaacattaatt-ggaagtatcggggaagatatcaatgcaggataattatcgcatactatcctgatat 118  Q
    ||||||||||||||| | |||||||||||||||||||||||||| ||||||||||||  |  ||||  || |||||||| |||| ||||| || ||||||    
T  24589991 cacatcagtactcaagagttaagttattttagttaacattaattgggaagtatcgggacatgtatcggtgtaggataatgatcggatactctcttgatat 24590090  T
Q  119 gtatcagaaagtatcggataattattttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcgg 194  Q
    ||||| | ||||||| ||||||||||||         |||||||||||||||  |||||||||| |||| ||||||    
T  24590091 gtatcgggaagtatcagataattattttttaaaaaaataaaatttaatcttcaaatactctcttgatacgtatcgg 24590166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 18 - 145
Target Start/End: Complemental strand, 47654917 - 47654789
Alignment:
Q  18 aacacatcagtactcaaaacttaagttattttagttaacattaattgg-aagtatcggggaagatatcaatgcaggataattatcgcatactatcctgat 116  Q
    ||||||||||||||||| | ||||||| ||||||| |||||||||||| || |||||||| || ||||  || ||||||||||||| ||||||| |||||    
T  47654917 aacacatcagtactcaagagttaagtttttttagtcaacattaattggaaaatatcggggcaggtatcggtgtaggataattatcgaatactattctgat 47654818  T
Q  117 atgtatcagaaagtatcggataattattt 145  Q
    | |||| || | |||||||||||||||||    
T  47654817 aagtatgaggatgtatcggataattattt 47654789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 18 - 179
Target Start/End: Complemental strand, 38218636 - 38218474
Alignment:
Q  18 aacacatcagtactcaaaacttaagttattttagttaacattaattgg-aagtatcggggaagatatcaatgcaggataattatcgcatactatcctgat 116  Q
    ||||||||| ||||||| | |||||||||||||| ||| ||||||||| ||||||||||| |||||    || |||||||| |||| ||||| |||| ||    
T  38218636 aacacatcaatactcaagagttaagttattttagctaatattaattgggaagtatcggggcagatactggtgtaggataatgatcggatactctcctaat 38218537  T
Q  117 atgtatcagaaagtatcggataattattttnnnnnnnnntaaaatttaatcttcggatactct 179  Q
    ||||||| | |||||||| |||||||||||         ||||||||||||||||||||||||    
T  38218536 atgtatcgggaagtatcgaataattattttttaaaaaaataaaatttaatcttcggatactct 38218474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 133
Target Start/End: Original strand, 2472786 - 2472904
Alignment:
Q  16 ataacacatcagtactcaaaacttaagttattttagttaacattaatt-ggaagtatcggggaagatatcaatgcaggataattatcgcatactatcctg 114  Q
    |||||||||  |||||||| | |||||||||||||||||||||||||| |||| |||||||| || | ||| ||| |||||||||||| ||||| |||||    
T  2472786 ataacacattcgtactcaagagttaagttattttagttaacattaattgggaaatatcggggcaggtgtcagtgctggataattatcggatactctcctg 2472885  T
Q  115 atatgtatcagaaagtatc 133  Q
    ||| ||||| |||||||||    
T  2472886 atacgtatcggaaagtatc 2472904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 38 - 257
Target Start/End: Original strand, 9528728 - 9528944
Alignment:
Q  38 ttaagttattttagttaacattaattg-gaagtatcggggaagatatcaatgcaggataattatcgcatactatcctgatatgtatcagaaagtatcgga 136  Q
    ||||||||||||||||||||||||||  ||||||| |||| || ||||  ||||| |||||||||| ||||| |||| ||| ||||| | ||||||| ||    
T  9528728 ttaagttattttagttaacattaattaagaagtattggggcaggtatctgtgcagaataattatcggatactctcctaatacgtatcgggaagtatcaga 9528827  T
Q  137 taattattttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgcatgatacgcagaagatac 236  Q
    ||||||||||          |||| ||||||||| |||||| ||   |||| |||||| ||||||||  ||||||||| |||| ||||| ||   |||||    
T  9528828 taattatttttaaaaa----aaaaattaatcttcagatactatcccgatacgtatcgggaagtatcaaacaggtatcggtgcaagatacacaagggatac 9528923  T
Q  237 aatacatcatccattttgaaa 257  Q
    ||||| |||||||||||||||    
T  9528924 aatacgtcatccattttgaaa 9528944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 117
Target Start/End: Complemental strand, 36551637 - 36551537
Alignment:
Q  18 aacacatcagtactcaaaacttaagttattttagttaacattaatt-ggaagtatcggggaagatatcaatgcaggataattatcgcatactatcctgat 116  Q
    ||||||||| ||||||| | |||||||||||||||||||||||||| ||||||||||||| ||||||| ||  |||||||| |||| ||||| |||||||    
T  36551637 aacacatcactactcaagagttaagttattttagttaacattaattgggaagtatcggggcagatatcgatataggataatgatcggatactctcctgat 36551538  T
Q  117 a 117  Q
    |    
T  36551537 a 36551537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 18 - 219
Target Start/End: Complemental strand, 24851723 - 24851525
Alignment:
Q  18 aacacatcagtactcaaaacttaagttattttagttaacattaattgg-aagtatcggggaagatatcaatgcaggataattatcgcatactatcctgat 116  Q
    ||||||||| ||||||| | |||||||||||||||||||||||||||| || |||||||| || |    |||   ||||||||||| ||||| |||||||    
T  24851723 aacacatcattactcaagagttaagttattttagttaacattaattggaaaatatcggggcaggt----atgggtgataattatcggatactctcctgat 24851628  T
Q  117 atgtatcagaaagtatcggataattattttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgat 216  Q
      ||||| | ||||||||||||||||||||         |||||||||||||| |||||||||||| |||  |||  | ||||||||  ||||||||| |    
T  24851627 gcgtatcgggaagtatcggataattattttttaaaaaaataaaatttaatctttggatactctcttgatatgtattaggaagtatcagacaggtatcggt 24851528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 256
Target Start/End: Complemental strand, 29862040 - 29861815
Alignment:
Q  28 tactcaaaacttaagttattttagttaacattaattgg-aagtatcggggaagatatcaatgcaggataattatcgcatactatcctgatatgtatcaga 126  Q
    ||||||| | ||||||||||||| ||||| |||||||| || ||| |||  || |||   |||||||||||||||| ||||| |||||||| |||||       
T  29862040 tactcaagagttaagttattttatttaacgttaattgggaattattgggacaggtataggtgcaggataattatcggatactttcctgatacgtatcgag 29861941  T
Q  127 aagtatcggataattattttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgcatgatacg 226  Q
    |||||||||||||||||||          |||||    |||||||||||||||  | |||| ||||||||||||||  |||||| | | |||||||||||    
T  29861940 aagtatcggataattatttaaaaaaaaaataaaa----atcttcggatactcttctgatacgtatcggaaagtatcgggcaggtgtgggtgcatgatacg 29861845  T
Q  227 cagaagatacaatacatcatccattttgaa 256  Q
     || ||||||||||| ||| ||||||||||    
T  29861844 taggagatacaatacgtcaaccattttgaa 29861815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 156 - 256
Target Start/End: Original strand, 34432387 - 34432487
Alignment:
Q  156 taaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgcatgatacgcagaagatacaatacatcatccattttga 255  Q
    ||||||||||||||||||||||||| | |||| |||| | |||||||| |||| || |  ||||||||||||||  |||||||||| |||||||||||||    
T  34432387 taaaatttaatcttcggatactctcctgatacgtatcaggaagtatcaggcagataccagtgcatgatacgcaggggatacaatacgtcatccattttga 34432486  T
Q  256 a 256  Q
    |    
T  34432487 a 34432487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 117 - 256
Target Start/End: Original strand, 6916839 - 6916978
Alignment:
Q  117 atgtatcagaaagtatcggataattattttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgat 216  Q
    ||||||| ||||||||||||||||||||||         ||||||||||| ||  |||||||||   |||| ||||||||||||||  |||||||||| |    
T  6916839 atgtatcggaaagtatcggataattattttttaaaaaaataaaatttaatatttagatactctccggatacgtatcggaaagtatcgggcaggtatcggt 6916938  T
Q  217 gcatgatacgcagaagatacaatacatcatccattttgaa 256  Q
    ||| |||||||||  |||||  ||| ||||||||||||||    
T  6916939 gcaggatacgcaggggatacggtacgtcatccattttgaa 6916978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 117 - 256
Target Start/End: Complemental strand, 37104273 - 37104134
Alignment:
Q  117 atgtatcagaaagtatcggataattattttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgat 216  Q
    ||||||| ||||||||||||||||||||||         ||||||||||| || ||||||||||   |||| |||| | |||||||  |||||||||| |    
T  37104273 atgtatcggaaagtatcggataattatttttttaaaaaataaaatttaatatttggatactctccggatacgtatcaggaagtatcgggcaggtatcggt 37104174  T
Q  217 gcatgatacgcagaagatacaatacatcatccattttgaa 256  Q
    ||| |||||||||  ||||| |||| ||||||||||||||    
T  37104173 gcaggatacgcaggggatacgatacgtcatccattttgaa 37104134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 117 - 256
Target Start/End: Complemental strand, 38330580 - 38330441
Alignment:
Q  117 atgtatcagaaagtatcggataattattttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgat 216  Q
    ||||||| ||||||||||||||||||||||         ||||||||||| ||  |||||||||   |||| ||||||||||||||  |||||||||| |    
T  38330580 atgtatcggaaagtatcggataattattttttaaaaaaataaaatttaatatttagatactctccggatacgtatcggaaagtatcgggcaggtatcggt 38330481  T
Q  217 gcatgatacgcagaagatacaatacatcatccattttgaa 256  Q
    ||| |||||||||  |||||  ||| ||||||||||||||    
T  38330480 gcaggatacgcaggggatacggtacgtcatccattttgaa 38330441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 117 - 256
Target Start/End: Original strand, 52895678 - 52895817
Alignment:
Q  117 atgtatcagaaagtatcggataattattttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgat 216  Q
    ||||||| ||||||||||||||||||||||         ||||||||||| ||  |||||||||   |||| ||||||||||||||  |||||||||| |    
T  52895678 atgtatcggaaagtatcggataattattttttaaaaaaataaaatttaatatttagatactctccggatacgtatcggaaagtatcgggcaggtatcggt 52895777  T
Q  217 gcatgatacgcagaagatacaatacatcatccattttgaa 256  Q
    ||| |||||||||  |||||  ||| ||||||||||||||    
T  52895778 gcaggatacgcaggggatacggtacgtcatccattttgaa 52895817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 119 - 256
Target Start/End: Complemental strand, 1036610 - 1036473
Alignment:
Q  119 gtatcagaaagtatcggataattattttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgc 218  Q
    ||||| ||||||||| ||||||||||||         ||||||||||| || ||||||||||   |||| ||||||||||||||  |||||||||| |||    
T  1036610 gtatcggaaagtatcagataattatttttttaaaaaataaaatttaatatttggatactctccggatacgtatcggaaagtatcgggcaggtatcggtgc 1036511  T
Q  219 atgatacgcagaagatacaatacatcatccattttgaa 256  Q
    | |||||||||  |||||  ||| ||||||||||||||    
T  1036510 aggatacgcaggggatacggtacgtcatccattttgaa 1036473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 119 - 256
Target Start/End: Complemental strand, 1043378 - 1043241
Alignment:
Q  119 gtatcagaaagtatcggataattattttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgc 218  Q
    ||||| ||||||||| ||||||||||||         ||||||||||| || ||||||||||   |||| |||||| |||||||  |||||||||| |||    
T  1043378 gtatcggaaagtatcagataattattttttttaaaaataaaatttaatatttggatactctccggatacgtatcgggaagtatcgggcaggtatcggtgc 1043279  T
Q  219 atgatacgcagaagatacaatacatcatccattttgaa 256  Q
    | |||||||||  |||||  ||||||||||||||||||    
T  1043278 aggatacgcaggggatacggtacatcatccattttgaa 1043241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 156 - 229
Target Start/End: Complemental strand, 2364791 - 2364718
Alignment:
Q  156 taaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgcatgatacgcag 229  Q
    ||||||||||||||||||||||||  | |||| |||||||||||||   ||||||||||||||| |||||||||    
T  2364791 taaaatttaatcttcggatactcttctgatacgtatcggaaagtattgggcaggtatcgatgcaggatacgcag 2364718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 117 - 256
Target Start/End: Complemental strand, 40776149 - 40776009
Alignment:
Q  117 atgtatcagaaa-gtatcggataattattttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcga 215  Q
    |||||||||||| ||||||||||||| ||||         ||||||||||||||||||||||| | | |||| |||||  ||||||||||||| ||| |     
T  40776149 atgtatcagaaaagtatcggataattgttttttaaaaaaataaaatttaatcttcggatactcgcctgatacgtatcgagaagtatcatgcagatattgg 40776050  T
Q  216 tgcatgatacgcagaagatacaatacatcatccattttgaa 256  Q
    |||| |||||||||  |||||| ||| || |||||||||||    
T  40776049 tgcaggatacgcaggggatacattacgtcttccattttgaa 40776009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 117 - 256
Target Start/End: Original strand, 28949206 - 28949345
Alignment:
Q  117 atgtatcagaaagtatcggataattattttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgat 216  Q
    ||||||| ||||||||||||||||||||||         ||||||||||| || ||||||||||   |||| |||| | |||||||  |||||||||| |    
T  28949206 atgtatcggaaagtatcggataattattttttaaaaaaataaaatttaatatttggatactctccggatacgtatcaggaagtatcgggcaggtatcggt 28949305  T
Q  217 gcatgatacgcagaagatacaatacatcatccattttgaa 256  Q
    ||| |||||||||  |||||  ||| ||||||||||||||    
T  28949306 gcaggatacgcaggggatacggtacgtcatccattttgaa 28949345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 38 - 145
Target Start/End: Original strand, 34096438 - 34096546
Alignment:
Q  38 ttaagttattttagttaacattaattg-gaagtatcggggaagatatcaatgcaggataattatcgcatactatcctgatatgtatcagaaagtatcgga 136  Q
    ||||||||||||| ||||| ||||||| ||| ||| |||| || |||   |||||||||||||| | ||||| |||||||| ||||| | ||||||||||    
T  34096438 ttaagttattttatttaacgttaattgagaattattggggcaggtataggtgcaggataattattggatactttcctgatacgtatcgggaagtatcgga 34096537  T
Q  137 taattattt 145  Q
    |||||||||    
T  34096538 taattattt 34096546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 65
Target Start/End: Complemental strand, 33039863 - 33039816
Alignment:
Q  18 aacacatcagtactcaaaacttaagttattttagttaacattaattgg 65  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||    
T  33039863 aacacatcagtactcaagagttaagttattttagttaacattaattgg 33039816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 256
Target Start/End: Complemental strand, 43189768 - 43189669
Alignment:
Q  157 aaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgcatgatacgcagaagatacaatacatcatccattttgaa 256  Q
    |||||||||| || |||||||||| | |||| |||||  |||||||  |||||||||| |||| |||||||||  |||||  ||||||||||||||||||    
T  43189768 aaaatttaatatttggatactctcctgatacgtatcgagaagtatcgggcaggtatcggtgcaggatacgcaggggatacggtacatcatccattttgaa 43189669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 156 - 256
Target Start/End: Complemental strand, 14167198 - 14167098
Alignment:
Q  156 taaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgcatgatacgcagaagatacaatacatcatccattttga 255  Q
    ||||||||||||||||||||||||  | |||| |||| | ||||||||  ||| ||||| |||| |||||||||  ||||| |||  |||||||||||||    
T  14167198 taaaatttaatcttcggatactcttctgatacgtatcaggaagtatcagacagatatcggtgcaggatacgcaggtgatacgataagtcatccattttga 14167099  T
Q  256 a 256  Q
    |    
T  14167098 a 14167098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 156 - 256
Target Start/End: Original strand, 20409558 - 20409658
Alignment:
Q  156 taaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgcatgatacgcagaagatacaatacatcatccattttga 255  Q
    ||||||||||| || ||||||||||   |||| |||||| |||||||  |||||||||| |||| |||||||||  |||||  ||| |||||||||||||    
T  20409558 taaaatttaatatttggatactctccggatacgtatcgggaagtatcgggcaggtatcggtgcaggatacgcaggggatacggtacgtcatccattttga 20409657  T
Q  256 a 256  Q
    |    
T  20409658 a 20409658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 256
Target Start/End: Original strand, 2472871 - 2472958
Alignment:
Q  169 tcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgcatgatacgcagaagatacaatacatcatccattttgaa 256  Q
    |||||||||||| | |||| ||||||||||||||| ||||||| || |||| |||| ||||  ||||| |||| ||||| ||||||||    
T  2472871 tcggatactctcctgatacgtatcggaaagtatcaggcaggtaccggtgcaggatatgcaggggatacgatacgtcatctattttgaa 2472958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 253
Target Start/End: Original strand, 28659267 - 28659401
Alignment:
Q  119 gtatcagaaagtatcggataattattttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgc 218  Q
    ||||| ||| ||||||||||||||||||         ||||||||||| || ||||||||||   |||| ||||||||||||||  ||| |||||| |||    
T  28659267 gtatcggaacgtatcggataattattttttaaaaaaataaaatttaatatttggatactctccggatacgtatcggaaagtatcgggcatgtatcggtgc 28659366  T
Q  219 atgatacgcagaagatacaatacatcatccatttt 253  Q
    |||||||||||   ||||  ||| |||||||||||    
T  28659367 atgatacgcagggaataccgtacgtcatccatttt 28659401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 117 - 253
Target Start/End: Complemental strand, 3427001 - 3426865
Alignment:
Q  117 atgtatcagaaagtatcggataattattttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgat 216  Q
    |||||||  |||||||||||||||||||||         ||||||||||| || ||||||||||   |||| |||| | |||||||   || |||||| |    
T  3427001 atgtatcgcaaagtatcggataattatttttttaaaaaataaaatttaatatttggatactctccggatacgtatcaggaagtatcggacatgtatcggt 3426902  T
Q  217 gcatgatacgcagaagatacaatacatcatccatttt 253  Q
    ||| |||||||||  |||||||||| |||||||||||    
T  3426901 gcaggatacgcaggggatacaatacgtcatccatttt 3426865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 156 - 257
Target Start/End: Complemental strand, 25256730 - 25256629
Alignment:
Q  156 taaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgcatgatacgcagaagatacaatacatcatccattttga 255  Q
    ||||||||||| || | ||||||||   |||| |||||| |||||||   ||||||||| ||||  ||||||||| |||||| ||| |||||||||||||    
T  25256730 taaaatttaatatttgaatactctccggatacgtatcgggaagtatcggacaggtatcggtgcagaatacgcagaggatacagtacgtcatccattttga 25256631  T
Q  256 aa 257  Q
    ||    
T  25256630 aa 25256629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 253
Target Start/End: Complemental strand, 33039790 - 33039630
Alignment:
Q  92 gataattatcgcatactatcctgatatgtatcagaaagtatcggataattattttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatat 191  Q
    ||||||||||| ||||| |||| ||| ||||| | ||||||||||||||||||||         || |||||||| ||||||||||||||| ||| ||||    
T  33039790 gataattatcggatactctcctcatacgtatcgggaagtatcggataattatttt-tttttaaatataatttaattttcggatactctcttgatatatat 33039692  T
Q  192 cggaaagtatcatgcaggtatcgatgcatgatacgcagaagatacaatacatcatccatttt 253  Q
    |||  |||||    ||||||||| |||| ||||||||   |||||||||  | |||||||||    
T  33039691 cggggagtattgaacaggtatcggtgcaggatacgcaagggatacaatatgttatccatttt 33039630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 156 - 253
Target Start/End: Complemental strand, 37922381 - 37922284
Alignment:
Q  156 taaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgcatgatacgcagaagatacaatacatcatccatttt 253  Q
    ||||||||||||||  ||||||||| ||| ||||||||  |||||||| |||| ||| |||||| |||| |||  ||||||| ||| || ||||||||    
T  37922381 taaaatttaatctttagatactctcctaacacatatcgagaagtatcaagcagatattgatgcaggatatgcatgagatacagtacgtcgtccatttt 37922284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 256
Target Start/End: Complemental strand, 5984341 - 5984241
Alignment:
Q  156 taaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgcatgatacgcagaagatacaatacatcatccattttga 255  Q
    ||||||||||| || ||||||||||   |||| ||| || |||||||| ||| |||||| ||||  ||||||||  |||||| ||| |||||||||||||    
T  5984341 taaaatttaatatttggatactctccagatacgtattgggaagtatcaagcatgtatcggtgcagaatacgcaggggatacagtacgtcatccattttga 5984242  T
Q  256 a 256  Q
    |    
T  5984241 a 5984241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 256
Target Start/End: Original strand, 13012996 - 13013096
Alignment:
Q  156 taaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgcatgatacgcagaagatacaatacatcatccattttga 255  Q
    ||||||||||| || ||||||||||   |||| |||||| |||||||  |||||||||  |||||||||| |||  ||||| |||  |||||||||||||    
T  13012996 taaaatttaatatttggatactctcccgatacgtatcgggaagtatcgggcaggtatcagtgcatgatacacaggggatacgatatgtcatccattttga 13013095  T
Q  256 a 256  Q
    |    
T  13013096 a 13013096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 256
Target Start/End: Original strand, 31653406 - 31653506
Alignment:
Q  156 taaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgcatgatacgcagaagatacaatacatcatccattttga 255  Q
    ||||||||||| || ||||||||||   |||| |||||| |||||||  |||| ||||| |||||||||| ||   ||||| |||||| |||||||||||    
T  31653406 taaaatttaatatttggatactctcccgatacgtatcgggaagtatcgggcagatatcggtgcatgatacacaagggatacgatacattatccattttga 31653505  T
Q  256 a 256  Q
    |    
T  31653506 a 31653506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 256
Target Start/End: Original strand, 37346852 - 37346952
Alignment:
Q  156 taaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgcatgatacgcagaagatacaatacatcatccattttga 255  Q
    ||||||||||| || |||||||| |   |||| |||||| |||||||  |||||||||| |||| |||||||||  |||||  ||| |||||||||||||    
T  37346852 taaaatttaatatttggatactcccccgatacgtatcgggaagtatcgggcaggtatcggtgcaggatacgcaggggatacggtacgtcatccattttga 37346951  T
Q  256 a 256  Q
    |    
T  37346952 a 37346952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 157 - 256
Target Start/End: Original strand, 3708284 - 3708383
Alignment:
Q  157 aaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgcatgatacgcagaagatacaatacatcatccattttgaa 256  Q
    |||||||||| |||| |||||||| | |||| ||||| ||||||||  ||| |||| | || | |||| ||||| ||||| |||| ||||||||||||||    
T  3708284 aaaatttaatattcgaatactctcctgatacgtatcgaaaagtatcgggcatgtattggtgtaggatatgcagaggatacgatacgtcatccattttgaa 3708383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 214
Target Start/End: Original strand, 2222983 - 2223041
Alignment:
Q  156 taaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcg 214  Q
    ||||||||||||||| ||||||||| | |||| ||||||||| |||||  |||||||||    
T  2222983 taaaatttaatcttcagatactctcctgatacgtatcggaaaatatcagacaggtatcg 2223041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 156 - 253
Target Start/End: Original strand, 32381063 - 32381160
Alignment:
Q  156 taaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgcatgatacgcagaagatacaatacatcatccatttt 253  Q
    ||||||||||||||||||||||||| | |||| ||| || ||||||||  ||  ||| | ||||||||| ||||  |||||  || ||||||||||||    
T  32381063 taaaatttaatcttcggatactctcctgatacgtattgggaagtatcagacaaatattggtgcatgatatgcaggggatacggtatatcatccatttt 32381160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 145
Target Start/End: Complemental strand, 10763886 - 10763779
Alignment:
Q  38 ttaagttattttagttaacattaatt-ggaagtatcggggaagatatcaatgcaggataattatcgcatactatcctgatatgtatcagaaagtatcgga 136  Q
    ||||||||||||| ||||| |||||| |||| ||| |||| || |||   |||||||||||||||  ||||| | |||||| ||| | | ||||||||||    
T  10763886 ttaagttattttatttaacgttaattgggaattattggggcaggtataggtgcaggataattatcagatacttttctgatacgta-ccggaagtatcgga 10763788  T
Q  137 taattattt 145  Q
    |||||||||    
T  10763787 taattattt 10763779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 78; Significance: 2e-36; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 18 - 253
Target Start/End: Original strand, 6707906 - 6708142
Alignment:
Q  18 aacacatcagtactcaaaacttaagttattttagttaacattaattgga-agtatcggggaagatatcaatgcaggataattatcgcatactatcctgat 116  Q
    ||||||||| ||||||| | ||||||||||||||| ||||||||||||  | || ||||| || ||||  ||| || ||||||||| ||||| | |||||    
T  6707906 aacacatcaatactcaagagttaagttattttagtcaacattaattggggaataacggggcaggtatcggtgctgggtaattatcgaatactcttctgat 6708005  T
Q  117 atgtatcagaaagtatcggataattattttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgat 216  Q
    | ||||| | ||||||||||||||||||||         ||| ||||||||||||||||||||| | |||||||| ||||||||||| | |||||||| |    
T  6708006 aagtatcgggaagtatcggataattatttttttttaaaataatatttaatcttcggatactctcctgatacatattggaaagtatcaggaaggtatcggt 6708105  T
Q  217 gcatgatacgcagaagatacaatacatcatccatttt 253  Q
    ||||||||| |||  |||||||||  |||||||||||    
T  6708106 gcatgatacacaggggatacaatatgtcatccatttt 6708142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 51 - 256
Target Start/End: Complemental strand, 26327374 - 26327169
Alignment:
Q  51 gttaacattaattg-gaagtatcggggaagatatcaatgcaggataattatcgcatactatcctgatatgtatcagaaagtatcggataattattttnnn 149  Q
    |||||||||||||| ||| |||||||| || ||||  ||||||||||| |||| ||||| | | |||| ||||| | ||||||||||||||||||||       
T  26327374 gttaacattaattgcgaaatatcggggcaggtatcggtgcaggataatcatcgaatactcttcagataagtatcgggaagtatcggataattattttttt 26327275  T
Q  150 nnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgcatgatacgcagaagatacaatacatcatcca 249  Q
          |||||||||||||||||||||||||||| ||| |||||| |||||||  |||||||||| |||| ||||| ||| |||||| |||| |||||||    
T  26327274 taaaaataaaatttaatcttcggatactctctta-tacgtatcgggaagtatcgggcaggtatcggtgcaggatacacaggagatacgatacgtcatcca 26327176  T
Q  250 ttttgaa 256  Q
    |||||||    
T  26327175 ttttgaa 26327169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 28 - 263
Target Start/End: Complemental strand, 19128396 - 19128161
Alignment:
Q  28 tactcaaaacttaagttattttagttaacattaattgg-aagtatcggggaagatatcaatgcaggataattatcgcatactatcctgatatgtatcaga 126  Q
    ||||||| | ||||||||||||| ||||| |||||||| || |||||||| ||| ||   || ||||||||||||| ||||| |||||||| ||||| |     
T  19128396 tactcaagagttaagttattttatttaacgttaattgggaattatcggggcagacataggtgaaggataattatcggatactttcctgatacgtatcggg 19128297  T
Q  127 aagtatcggataattattttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgcatgatacg 226  Q
    ||||||||||||||||||||         ||||||||||||||||||||||||  | |||| ||||||||||||||  || ||||| | |||| |||||     
T  19128296 aagtatcggataattatttttaaaaaaaataaaatttaatcttcggatactcttctgatacgtatcggaaagtatcgggcgggtattggtgcaggataca 19128197  T
Q  227 cagaagatacaatacatcatccattttgaaagtattg 263  Q
    |||  ||||| |||| ||| ||||||| |||||||||    
T  19128196 caggggatacgatacgtcaaccatttt-aaagtattg 19128161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 18 - 256
Target Start/End: Original strand, 13607650 - 13607889
Alignment:
Q  18 aacacatcagtactcaaaacttaagttattttagttaacattaattg-gaagtatcggggaagatatcaatgcaggataattatcgcatactatcctgat 116  Q
    ||||||||| ||||||| | |||||||||||||||||||||||||||  || ||| |||| || ||||  || ||||||||||||  |||||||||||||    
T  13607650 aacacatcaatactcaagaattaagttattttagttaacattaattgaaaaatattggggcaggtatcggtgtaggataattatcatatactatcctgat 13607749  T
Q  117 atgtatcagaaagtatcggataattattttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgat 216  Q
    | ||||| | |||||||  ||||||||||            ||| ||||||||||||||||||| | |||| |||| |||| ||| | |||||||||  |    
T  13607750 acgtatcgggaagtatcatataattatttataaaataaaataaagttaatcttcggatactctcctgatacgtatcagaaattattaggcaggtatcagt 13607849  T
Q  217 gcatgatacgcagaagatacaatacatcatccattttgaa 256  Q
    ||| |||| ||||| ||||| |||| ||||||||||||||    
T  13607850 gcaggatatgcagaggatacgatacgtcatccattttgaa 13607889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 16 - 179
Target Start/End: Complemental strand, 7255176 - 7255011
Alignment:
Q  16 ataacacatcagtactcaaaacttaagttattttagttaacattaattgg-aagtatcggggaagatatcaatgcaggataattatcgcatactatcctg 114  Q
    ||||||||||||||||||| | ||||||||||| |||||||||||||||| || |||||||| || ||||  |||| |||| |||||| ||||| |||||    
T  7255176 ataacacatcagtactcaagagttaagttatttaagttaacattaattggaaaatatcggggcaggtatcggtgcatgatacttatcggatactctcctg 7255077  T
Q  115 atatgtatcagaaagtatcggataattatt-ttnnnnnnnnntaaaatttaatcttcggatactct 179  Q
    ||| ||||| | ||||||| |||||||||| ||         ||||||||||||||||||||||||    
T  7255076 atacgtatcgggaagtatcagataattattattatttttaaataaaatttaatcttcggatactct 7255011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 18 - 142
Target Start/End: Original strand, 10894384 - 10894509
Alignment:
Q  18 aacacatcagtactcaaaacttaagttattttagttaacattaattgg-aagtatcggggaagatatcaatgcaggataattatcgcatactatcctgat 116  Q
    ||||||||| ||||| | | |||||| ||||||||||||||||||||| || |||||||| || ||||  |||||||||||||||| ||||| |||||||    
T  10894384 aacacatcaatactcgagagttaagtaattttagttaacattaattgggaaatatcggggtaggtatcggtgcaggataattatcggatactctcctgat 10894483  T
Q  117 atgtatcagaaagtatcggataatta 142  Q
    | |||| || |||||||| |||||||    
T  10894484 acgtattaggaagtatcgaataatta 10894509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 18 - 253
Target Start/End: Complemental strand, 11105539 - 11105303
Alignment:
Q  18 aacacatcagtactcaaaacttaagttattttagttaacattaattg-gaagtatcggggaagatatcaatgcaggataattatcgcatactatcctgat 116  Q
    |||| |||| ||||||| | |||| |||||||| ||||||||||||| |||||||||| |||||||||  || |||||||| |||| ||||| |  ||||    
T  11105539 aacatatcaatactcaagaattaatttattttatttaacattaattgagaagtatcggagaagatatcgttgtaggataatgatcggatactcttttgat 11105440  T
Q  117 atgtatcagaaagtatcggataattattttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgat 216  Q
    ||||||  | |||||||| |||||||||||         |||||||||||||||| ||| |||  | |||| |||| |||||||||   || ||||||||    
T  11105439 atgtatacggaagtatcgaataattattttttaaaaaaataaaatttaatcttcgaatattcttctgatacgtatcagaaagtatcgaacatgtatcgat 11105340  T
Q  217 gcatgatacgcagaagatacaatacatcatccatttt 253  Q
    ||| |||||||| |  ||||  ||| |||||||||||    
T  11105339 gcaggatacgcaaagaatacggtacgtcatccatttt 11105303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 28 - 256
Target Start/End: Complemental strand, 234552 - 234320
Alignment:
Q  28 tactcaaaacttaagttattttagttaacattaattggaagt-atcggggaagatatcaatgcaggataattatcgcatactatcctgatatgtatcaga 126  Q
    ||||||| | ||||||||||||| ||||| |||||||||| | || |||| || |||  || || ||||||||||| ||||| |||||| |  |||| |     
T  234552 tactcaagagttaagttattttatttaacgttaattggaaattattggggcaggtatagattcaagataattatcggatactttcctgaaacatatcggg 234453  T
Q  127 aagtatcggataattattttnnnnnnnnntaaaat---ttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgcatgat 223  Q
    ||||||||||||||||||||          ||||    ||||||||||||||||||  | |||| ||||||||||||||  |||||||||| |||| |||    
T  234452 aagtatcggataattattttaaaaaaaaaaaaaaaaagttaatcttcggatactcttctgatacgtatcggaaagtatcgggcaggtatcggtgcaggat 234353  T
Q  224 acgcagaagatacaatacatcatccattttgaa 256  Q
    |||||| |||||| |||| ||| ||||||||||    
T  234352 acgcaggagatacgatacgtcaaccattttgaa 234320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 117 - 256
Target Start/End: Original strand, 31195834 - 31195973
Alignment:
Q  117 atgtatcagaaagtatcggataattattttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgat 216  Q
    ||||||| ||||||||||||||||||||||         ||||||||||| || ||||||||||   |||| |||||| |||||||  |||||||||| |    
T  31195834 atgtatcggaaagtatcggataattatttttttaaaaaataaaatttaatatttggatactctccagatacgtatcgggaagtatcgggcaggtatcggt 31195933  T
Q  217 gcatgatacgcagaagatacaatacatcatccattttgaa 256  Q
    ||| |||||||||  ||||| |||| ||||||||||||||    
T  31195934 gcaggatacgcaggggatacgatacgtcatccattttgaa 31195973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 117 - 256
Target Start/End: Original strand, 1036791 - 1036930
Alignment:
Q  117 atgtatcagaaagtatcggataattattttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgat 216  Q
    ||||||| ||||||||||||||||||||||         ||||||||||| ||  |||||||||   |||| ||||||||||||||  |||||||||| |    
T  1036791 atgtatcggaaagtatcggataattattttttaaaaaaataaaatttaatatttagatactctccggatacgtatcggaaagtatcgggcaggtatcggt 1036890  T
Q  217 gcatgatacgcagaagatacaatacatcatccattttgaa 256  Q
    ||| |||||||||  |||||  ||| ||||||||||||||    
T  1036891 gcaggatacgcaggggatacggtacgtcatccattttgaa 1036930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 25 - 135
Target Start/End: Original strand, 13045248 - 13045359
Alignment:
Q  25 cagtactcaaaacttaagttattttagttaacattaatt-ggaagtatcggggaagatatcaatgcaggataattatcgcatactatcctgatatgtatc 123  Q
    |||||||||| | |||||||||||||||| ||||||||| |||| ||| |||| |||||||  ||||||||| |||||  ||| | ||||||||  ||||    
T  13045248 cagtactcaagagttaagttattttagttgacattaattgggaaatattggggcagatatcggtgcaggatagttatcagatattctcctgatacttatc 13045347  T
Q  124 agaaagtatcgg 135  Q
    ||||||||||||    
T  13045348 agaaagtatcgg 13045359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 18 - 146
Target Start/End: Complemental strand, 31079852 - 31079726
Alignment:
Q  18 aacacatcagtactcaaaacttaagttattttagttaacattaattggaagtatcggggaagatatcaatgcaggataattatcgcatactatcctgata 117  Q
    |||||||||||| |||| | |||||||||||||||||||| |  | |||| |||||| | || ||||  |||| |||||| |||| ||||| ||||||||    
T  31079852 aacacatcagtattcaagatttaagttattttagttaacaat--tgggaaatatcggagcaggtatcggtgcatgataatcatcggatactctcctgata 31079755  T
Q  118 tgtatcagaaagtatcggataattatttt 146  Q
     ||||| | ||||||| ||||||||||||    
T  31079754 cgtatcgggaagtatcagataattatttt 31079726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 156 - 256
Target Start/End: Complemental strand, 3299255 - 3299155
Alignment:
Q  156 taaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgcatgatacgcagaagatacaatacatcatccattttga 255  Q
    ||||||||||||||   ||||||||   |||| ||||||||| |||||||||||||||| |||| |||| ||||| |||||  ||||||||| |||||||    
T  3299255 taaaatttaatctttaaatactctccagatacgtatcggaaaatatcatgcaggtatcggtgcaggatatgcagaggatacggtacatcatctattttga 3299156  T
Q  256 a 256  Q
    |    
T  3299155 a 3299155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 156 - 256
Target Start/End: Complemental strand, 27084099 - 27083999
Alignment:
Q  156 taaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgcatgatacgcagaagatacaatacatcatccattttga 255  Q
    |||||||||||||| |||||||||| | |||| ||| || ||||||   |||||||||| |||| |||||||||  ||||| |||| |||||||||||||    
T  27084099 taaaatttaatctttggatactctccttatacgtattgggaagtattgagcaggtatcggtgcaggatacgcaggggatacgatacgtcatccattttga 27084000  T
Q  256 a 256  Q
    |    
T  27083999 a 27083999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 133
Target Start/End: Original strand, 13061237 - 13061355
Alignment:
Q  16 ataacacatcagtactcaaaacttaagttattttagttaacattaatt-ggaagtatcggggaagatatcaatgcaggataattatcgcatactatcctg 114  Q
    ||||||||||| ||||||||| |||||||||||||||||| ||||||| |||| ||  |||| || |||   |||| |||| |||||  ||||| ||||     
T  13061237 ataacacatcaatactcaaaaattaagttattttagttaatattaattgggaaatactggggcaggtattgctgcaagatagttatcagatactctccta 13061336  T
Q  115 atatgtatcagaaagtatc 133  Q
    ||| |||||||||||||||    
T  13061337 atacgtatcagaaagtatc 13061355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 3212822 - 3212778
Alignment:
Q  18 aacacatcagtactcaaaacttaagttattttagttaacattaat 62  Q
    ||||||||||||||||| | |||||||||||||||||||||||||    
T  3212822 aacacatcagtactcaagagttaagttattttagttaacattaat 3212778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 28 - 123
Target Start/End: Complemental strand, 27084217 - 27084121
Alignment:
Q  28 tactcaaaacttaagttattttagttaacattaatt-ggaagtatcggggaagatatcaatgcaggataattatcgcatactatcctgatatgtatc 123  Q
    ||||||| | |||||||||||||||||||||||||| |||||||| |||| || ||||| ||||  |||||||||  ||| | |||||||| |||||    
T  27084217 tactcaagagttaagttattttagttaacattaattgggaagtatgggggcagttatcagtgcaaaataattatcagatattttcctgatacgtatc 27084121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 119 - 256
Target Start/End: Complemental strand, 8357109 - 8356972
Alignment:
Q  119 gtatcagaaagtatcggataattattttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgc 218  Q
    ||||| ||||||||||||||||||||||         ||||||||||| || |||||||||    |||| |||||| |||||||   ||||||||| |||    
T  8357109 gtatcggaaagtatcggataattatttttttaaaaaataaaatttaatatttggatactcttcggatacgtatcgggaagtatcggacaggtatcggtgc 8357010  T
Q  219 atgatacgcagaagatacaatacatcatccattttgaa 256  Q
    | |||||||||  |||||  ||| ||||||||||||||    
T  8357009 aggatacgcaggggatacggtacgtcatccattttgaa 8356972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 156 - 229
Target Start/End: Original strand, 7188783 - 7188856
Alignment:
Q  156 taaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgcatgatacgcag 229  Q
    ||||||||||| || ||||||||||   |||| |||| | |||||||| |||||||||| |||| |||||||||    
T  7188783 taaaatttaatatttggatactctccggatacgtatcaggaagtatcaggcaggtatcggtgcaggatacgcag 7188856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 256
Target Start/End: Complemental strand, 32018063 - 32017991
Alignment:
Q  184 atacatatcggaaagtatcatgcaggtatcgatgcatgatacgcagaagatacaatacatcatccattttgaa 256  Q
    |||| ||| ||||||||||  |||| ||||| |||| |||||||||  ||||| |||| ||||||||||||||    
T  32018063 atacgtataggaaagtatcgggcagatatcggtgcaggatacgcaggggatacgatacgtcatccattttgaa 32017991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 77; Significance: 9e-36; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 38 - 256
Target Start/End: Complemental strand, 27886423 - 27886204
Alignment:
Q  38 ttaagttattttagttaacattaattg-gaagtatcggggaagatatcaatgcaggataattatcgcatactatcctgatatgtatcagaaagtatcgga 136  Q
    |||||||||||| |||||||||||||| |||||||| ||| |||||||| |||| ||||||||||| ||||| |||||||||||||    ||||||| ||    
T  27886423 ttaagttattttcgttaacattaattgtgaagtatcagggcagatatcagtgcaagataattatcggatactctcctgatatgtattgagaagtatcaga 27886324  T
Q  137 taattattttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgcatgatacgcagaagatac 236  Q
    ||| ||||||         |||| |||||||||||||||||||| | |||| |||||| ||||||||  ||||||||| |||| |||| ||||   ||||    
T  27886323 taactattttttttaaaaataaactttaatcttcggatactctcctgatacgtatcgggaagtatcaaccaggtatcggtgcaggatatgcagggaatac 27886224  T
Q  237 aatacatcatccattttgaa 256  Q
    ||||| ||||||||||||||    
T  27886223 aatacgtcatccattttgaa 27886204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 38 - 256
Target Start/End: Complemental strand, 27945081 - 27944862
Alignment:
Q  38 ttaagttattttagttaacattaattg-gaagtatcggggaagatatcaatgcaggataattatcgcatactatcctgatatgtatcagaaagtatcgga 136  Q
    |||||||||||| |||||||||||||| |||||||| ||| |||||||| |||| ||||||||||| ||||| |||||||||||||    ||||||| ||    
T  27945081 ttaagttattttcgttaacattaattgtgaagtatcagggcagatatcagtgcaagataattatcggatactctcctgatatgtattgagaagtatcaga 27944982  T
Q  137 taattattttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgcatgatacgcagaagatac 236  Q
    ||| ||||||         |||| |||||||||||||||||||| | |||| |||||| ||||||||  ||||||||| |||| |||| ||||   ||||    
T  27944981 taactattttttttaaaaataaactttaatcttcggatactctcctgatacgtatcgggaagtatcaaccaggtatcggtgcaggatatgcagggaatac 27944882  T
Q  237 aatacatcatccattttgaa 256  Q
    ||||| ||||||||||||||    
T  27944881 aatacgtcatccattttgaa 27944862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 18 - 256
Target Start/End: Complemental strand, 38388920 - 38388681
Alignment:
Q  18 aacacatcagtactcaaaacttaagttattttagttaacattaattgg-aagtatcggggaagatatcaatgcaggataattatcgcatactatcctgat 116  Q
    ||||||||||||||| | | ||||||| ||||||| |||||||||||| || |||||||| || ||||  || ||||||||||||| ||||| | |||||    
T  38388920 aacacatcagtactcgagagttaagtttttttagtcaacattaattgggaaatatcggggcaggtatcggtgtaggataattatcgaatactcttctgat 38388821  T
Q  117 atgtatcagaaagtatcggataattattttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgat 216  Q
    | ||||||| |||||| |||||||| ||||         |||||||||||||||||||||| || | | || |||||  |||||||   ||||||||| |    
T  38388820 aagtatcaggaagtattggataattgttttttaaaaaaataaaatttaatcttcggatactttcctgacacgtatcgagaagtatcggacaggtatcggt 38388721  T
Q  217 gcatgatacgcagaagatacaatacatcatccattttgaa 256  Q
    ||| |||||||||| ||||||||||| |||||||||||||    
T  38388720 gcaggatacgcagaggatacaatacagcatccattttgaa 38388681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 28 - 256
Target Start/End: Complemental strand, 37372503 - 37372273
Alignment:
Q  28 tactcaaaacttaagttattttagttaacattaattgg-aagtatcggggaagatatcaatgcaggataattatcgcatactatcctgatatgtatcaga 126  Q
    ||||||| | |||||||||||||||||||||||||||| |||||| |||| || ||||  ||||  |||||||||| ||||| |||||||| ||||  |     
T  37372503 tactcaagaattaagttattttagttaacattaattgggaagtattggggcaggtatcggtgcaaaataattatcggatactctcctgatacgtattggg 37372404  T
Q  127 aagtatcggataattatt-ttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgcatgatac 225  Q
    |||||||| ||||||||| ||         ||||||||||||||||||||||||| | |||| |||||| ||||||||  ||||||||  |||| |||||    
T  37372403 aagtatcgaataattattattatttttaaataaaatttaatcttcggatactctcctgatacgtatcgggaagtatcagacaggtatcagtgcaggatac 37372304  T
Q  226 gcagaagatacaatacatcatccattttgaa 256  Q
    |||| |||||| |||| ||||||||||||||    
T  37372303 gcaggagatacgatacgtcatccattttgaa 37372273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 38 - 253
Target Start/End: Complemental strand, 27968338 - 27968120
Alignment:
Q  38 ttaagttattttagttaacattaattgg-aagtatcggggaagatatcaatgcaggataattatcgcatactatcctgatatgtatcagaaagtatcgga 136  Q
    |||||||||||||||||||||||||||| ||||||| ||| |||||||| |||| ||||||||||| ||||| ||||||||||||||   ||||||| ||    
T  27968338 ttaagttattttagttaacattaattgggaagtatcagggcagatatcagtgcaagataattatcggatactctcctgatatgtatcgagaagtatcaga 27968239  T
Q  137 taattattttnnnnnnnnntaaaatttaatcttcggatac--tctcttaatacatatcggaaagtatcatgcaggtatcgatgcatgatacgcagaagat 234  Q
    ||||||||||         |||| ||||||||||||||||  |||| | |||| |||||| ||||||||  ||||||||| |||| |||| ||||   ||    
T  27968238 taattatttttttaaaaaataaactttaatcttcggatacgatctcctgatacgtatcgggaagtatcagccaggtatcggtgcaggatatgcagggaat 27968139  T
Q  235 acaatacatcatccatttt 253  Q
    ||||||| ||||| |||||    
T  27968138 acaatacgtcatctatttt 27968120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 38 - 256
Target Start/End: Complemental strand, 32425154 - 32424935
Alignment:
Q  38 ttaagttattttagttaacattaattggaa-gtatcggggaagatatcaatgcaggataattatcgcatactatcctgatatgtatcagaaagtatcgga 136  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||| |  || |||||||| |||| ||||| ||||||||  |||| | ||||||||||    
T  32425154 ttaagttattttagttaacattaattggaaagtatcggggcagataccggtgtaggataatgatcggatactctcctgatacatatcgggaagtatcgga 32425055  T
Q  137 taattattttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgcatgatacgcagaagatac 236  Q
    ||||||||||         ||||||||||||||||||||||||  | |||| |||||  ||||||||  ||||||||| |||| ||||||||   |||||    
T  32425054 taattattttttttaaaaataaaatttaatcttcggatactcttctgatacgtatcgtgaagtatcagacaggtatcggtgcaggatacgcaagggatac 32424955  T
Q  237 aatacatcatccattttgaa 256  Q
      ||| ||||||||||||||    
T  32424954 ggtacgtcatccattttgaa 32424935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 28 - 256
Target Start/End: Complemental strand, 3892207 - 3891976
Alignment:
Q  28 tactcaaaacttaagttattttagttaacattaattgg-aagtatcggggaagatatcaatgcaggataattatcgcatactatcctgatatgtatcaga 126  Q
    ||||||| | |||||||||||||||||||||||||||| |||||| |||| || ||||  |||||||||||||||| ||||| |||||||| |||||       
T  3892207 tactcaagagttaagttattttagttaacattaattgggaagtattggggcaggtatcggtgcaggataattatcggatactctcctgatacgtatcgag 3892108  T
Q  127 aagtatcggataattattt--tnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgcatgata 224  Q
    ||||||| |||||||||||             ||||||||||||||| |||||||||  |||| ||| |||||||||||  || |||||| |||||||||    
T  3892107 aagtatcagataattatttaaaaaaaaaaacaaaaatttaatcttcgaatactctctcgatacgtattggaaagtatcagacaagtatcggtgcatgata 3892008  T
Q  225 cgcagaagatacaatacatcatccattttgaa 256  Q
    || || ||||| ||||| ||||||||||||||    
T  3892007 cgtaggagatataatacgtcatccattttgaa 3891976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 38 - 253
Target Start/End: Complemental strand, 28025324 - 28025106
Alignment:
Q  38 ttaagttattttagttaacattaattg-gaagtatcggggaagatatcaatgcaggataattatcgcatactatcctgatatgtatcagaaagtatcgga 136  Q
    |||||||||||| |||||||||||||| |||||||| ||| |||||||| |||| ||||||||||| ||||| ||||||||||||||   ||||||| ||    
T  28025324 ttaagttattttcgttaacattaattgtgaagtatcagggcagatatcagtgcaagataattatcggatactctcctgatatgtatcgagaagtatcaga 28025225  T
Q  137 taattattttnnnnnnnnntaaaatttaatcttcggatac--tctcttaatacatatcggaaagtatcatgcaggtatcgatgcatgatacgcagaagat 234  Q
    ||||||||||         |||| ||||||||||||||||  |||| | |||| |||||| ||||||||  ||||||||| |||| |||| ||||   ||    
T  28025224 taattatttttttaaaaaataaactttaatcttcggatacgatctcctgatacgtatcgggaagtatcagccaggtatcggtgcaggatatgcagggaat 28025125  T
Q  235 acaatacatcatccatttt 253  Q
    ||||||| ||||| |||||    
T  28025124 acaatacgtcatctatttt 28025106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 18 - 146
Target Start/End: Complemental strand, 7411855 - 7411726
Alignment:
Q  18 aacacatcagtactcaaaacttaagttattttagttaacattaattgg-aagtatcggggaagatatcaatgcaggataattatcgcatactatcctgat 116  Q
    |||||||| || ||||| | |||||||||||||||||||||||||||| ||||||||||| |  |||||||| |||||||| |||| ||||| |||||||    
T  7411855 aacacatcggttctcaagagttaagttattttagttaacattaattgggaagtatcggggcatgtatcaatgtaggataatgatcggatactctcctgat 7411756  T
Q  117 atgtatcagaaagtatcggataattatttt 146  Q
    |||||||   ||||||||||||||||||||    
T  7411755 atgtatcgagaagtatcggataattatttt 7411726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 156 - 256
Target Start/End: Original strand, 5818315 - 5818415
Alignment:
Q  156 taaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgcatgatacgcagaagatacaatacatcatccattttga 255  Q
    ||||||||||||||| ||||||||| | ||||||||||| || |||||||||||||||| |||| ||||||||   ||||| |||| |||||||||||||    
T  5818315 taaaatttaatcttcagatactctcctgatacatatcgggaaatatcatgcaggtatcggtgcaggatacgcaagtgatacgatacgtcatccattttga 5818414  T
Q  256 a 256  Q
    |    
T  5818415 a 5818415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 117 - 256
Target Start/End: Original strand, 22201302 - 22201441
Alignment:
Q  117 atgtatcagaaagtatcggataattattttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgat 216  Q
    ||||||| ||||||||||||||||||||||         ||||||||||| || ||||||||||   |||| ||||||||||||||  |||||||||| |    
T  22201302 atgtatcggaaagtatcggataattattttttaaaaaaataaaatttaatatttggatactctccggatacgtatcggaaagtatcgggcaggtatcggt 22201401  T
Q  217 gcatgatacgcagaagatacaatacatcatccattttgaa 256  Q
    ||| |||||||||  ||||| |||| ||||||||||||||    
T  22201402 gcaggatacgcaggggatacgatacgtcatccattttgaa 22201441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 38 - 256
Target Start/End: Complemental strand, 29355857 - 29355637
Alignment:
Q  38 ttaagttattttagttaacattaattg-gaagtatcggggaagatatcaatgcaggataattatcgcatactatcctgatatgtatcagaaagtatcgga 136  Q
    |||||||||| ||||||||||| |||| ||| ||||| || ||||||| | | ||||||||||||  ||||| |||| ||| ||||| | ||||||||      
T  29355857 ttaagttattgtagttaacatttattgtgaaatatcgaggcagatatcgacgtaggataattatcagatactttccttatacgtatcgggaagtatcgac 29355758  T
Q  137 taatta-ttttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgcatgatacgcagaagata 235  Q
    |||||| ||||         ||||||||||||||||||||||||| |  ||| |||||| |||||||| |||| |||||||||| ||||| |||  ||||    
T  29355757 taattactttttttaaaaattaaaatttaatcttcggatactctcctgctacgtatcgggaagtatcaagcagctatcgatgcaggatacccaggggata 29355658  T
Q  236 caatacatcatccattttgaa 256  Q
      |||  ||||||||||||||    
T  29355657 tgatatgtcatccattttgaa 29355637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 38 - 203
Target Start/End: Complemental strand, 20182606 - 20182440
Alignment:
Q  38 ttaagttattttagttaacattaattg-gaagtatcggggaagatatcaatgcaggataattatcgcatactatcctgatatgtatcagaaagtatcgga 136  Q
    |||||||||||||||||||||| |||| ||| ||||| || ||||||| ||| || |||||||||  ||||| || ||||| ||||| | |||||||||     
T  20182606 ttaagttattttagttaacatttattgtgaaatatcgaggcagatatcgatgtagaataattatcagatactttcttgatacgtatcgggaagtatcggt 20182507  T
Q  137 taattattttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatca 203  Q
    ||||||||||         ||||||||||||||| ||||||||  | |||| ||||| |||||||||    
T  20182506 taattatttttttaaaaattaaaatttaatcttcagatactctactgatacgtatcgaaaagtatca 20182440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 117 - 256
Target Start/End: Original strand, 34901347 - 34901486
Alignment:
Q  117 atgtatcagaaagtatcggataattattttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgat 216  Q
    ||||||| ||||||||||||||||||||||         ||||||||||| ||  |||||||||   |||| ||||||||||||||  |||||||||| |    
T  34901347 atgtatcggaaagtatcggataattattttttaaaaaaataaaatttaatatttagatactctccggatacgtatcggaaagtatcgggcaggtatcggt 34901446  T
Q  217 gcatgatacgcagaagatacaatacatcatccattttgaa 256  Q
    ||| |||||||||  |||||  ||| ||||||||||||||    
T  34901447 gcaggatacgcaggggatacggtacgtcatccattttgaa 34901486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 119 - 256
Target Start/End: Complemental strand, 32759524 - 32759387
Alignment:
Q  119 gtatcagaaagtatcggataattattttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgc 218  Q
    ||||| ||||||||||||||||||||||         ||||||||||| || ||||||||||   |||| |||||| |||||||  |||||||||| |||    
T  32759524 gtatcggaaagtatcggataattattttttaaaaaaataaaatttaatatttggatactctccagatacgtatcgggaagtatcgggcaggtatcggtgc 32759425  T
Q  219 atgatacgcagaagatacaatacatcatccattttgaa 256  Q
    | |||||||||  |||||  ||| ||||||||||||||    
T  32759424 aggatacgcaggggatacggtacgtcatccattttgaa 32759387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 117 - 256
Target Start/End: Original strand, 28876530 - 28876670
Alignment:
Q  117 atgtatcagaaagtatcggataattattttnnnnnnnnn-taaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcga 215  Q
    ||||||| ||||||||||||||||||||||          ||||||||||| || |||||||||||  |||| |||||  |||||||  ||||||||||     
T  28876530 atgtatcggaaagtatcggataattattttttttaaaaaataaaatttaatatttggatactctctggatacgtatcgagaagtatcgggcaggtatcgg 28876629  T
Q  216 tgcatgatacgcagaagatacaatacatcatccattttgaa 256  Q
    |||| |||||||||  |||||| ||| ||||||||||||||    
T  28876630 tgcaggatacgcaggggatacagtacgtcatccattttgaa 28876670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 117 - 256
Target Start/End: Complemental strand, 13422361 - 13422222
Alignment:
Q  117 atgtatcagaaagtatcggataattattttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgat 216  Q
    ||||||| |||||||| |||||||||||||         ||||||||||| || ||||||||||   |||| |||||| |||||||| |||||||||| |    
T  13422361 atgtatcggaaagtattggataattattttttaacaaaataaaatttaatatttggatactctccgtatacgtatcgggaagtatcaggcaggtatcggt 13422262  T
Q  217 gcatgatacgcagaagatacaatacatcatccattttgaa 256  Q
    ||| |||| ||||  |||||  ||| ||||||||||||||    
T  13422261 gcaggatatgcaggggatacggtacgtcatccattttgaa 13422222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 156 - 208
Target Start/End: Original strand, 24100197 - 24100249
Alignment:
Q  156 taaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcag 208  Q
    ||||||||||||||||||||||||| | |||||||||||||| ||||||||||    
T  24100197 taaaatttaatcttcggatactctcctgatacatatcggaaaatatcatgcag 24100249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 156 - 256
Target Start/End: Complemental strand, 32877551 - 32877451
Alignment:
Q  156 taaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgcatgatacgcagaagatacaatacatcatccattttga 255  Q
    ||||||||||| || ||||||||||   |||| |||||| |||||||  |||||||||| |||| |||||||||  ||||| |||| |||||||||||||    
T  32877551 taaaatttaatatttggatactctcccgatacgtatcgggaagtatcgggcaggtatcggtgcaggatacgcaggggatacgatacgtcatccattttga 32877452  T
Q  256 a 256  Q
    |    
T  32877451 a 32877451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 156 - 253
Target Start/End: Original strand, 45217224 - 45217321
Alignment:
Q  156 taaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgcatgatacgcagaagatacaatacatcatccatttt 253  Q
    ||||||||||| || ||||||||||   |||| ||||||||| ||||   ||||||||| |||| |||||||||  ||||||||| ||||||||||||    
T  45217224 taaaatttaatatttggatactctccggatacgtatcggaaaatatcggacaggtatcggtgcaggatacgcaggggatacaatatatcatccatttt 45217321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 156 - 256
Target Start/End: Original strand, 12580557 - 12580657
Alignment:
Q  156 taaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgcatgatacgcagaagatacaatacatcatccattttga 255  Q
    ||||||||||| || ||||||||||   |||| |||||| ||||||||  ||| ||||| |||| ||||||||| ||||||  ||||||||| |||||||    
T  12580557 taaaatttaatatttggatactctccggatacgtatcgggaagtatcagacagttatcggtgcaggatacgcaggagatacggtacatcatctattttga 12580656  T
Q  256 a 256  Q
    |    
T  12580657 a 12580657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 117 - 256
Target Start/End: Complemental strand, 16384770 - 16384631
Alignment:
Q  117 atgtatcagaaagtatcggataattattttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgat 216  Q
    ||||||| ||||||||||||||||||||||         ||||||||||| || |||||||||    |||| |||||| |||||||  |||||||||| |    
T  16384770 atgtatcggaaagtatcggataattatttttttaaaaaataaaatttaatatttggatactcttcggatacgtatcgggaagtatcgggcaggtatcggt 16384671  T
Q  217 gcatgatacgcagaagatacaatacatcatccattttgaa 256  Q
    ||| ||||| |||  |||||  ||| ||||||||||||||    
T  16384670 gcaggatactcaggggatacggtacgtcatccattttgaa 16384631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 157 - 253
Target Start/End: Original strand, 30804750 - 30804846
Alignment:
Q  157 aaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgcatgatacgcagaagatacaatacatcatccatttt 253  Q
    |||| ||||| ||||||||||||| | |||| ||||||||||||||  |||  ||| |||||| ||||||||| | ||||||||| ||||| |||||    
T  30804750 aaaaattaatattcggatactctcctgatacgtatcggaaagtatcgagcaaatattgatgcaagatacgcaggatatacaatacgtcatctatttt 30804846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 156 - 256
Target Start/End: Complemental strand, 36483549 - 36483449
Alignment:
Q  156 taaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgcatgatacgcagaagatacaatacatcatccattttga 255  Q
    ||||||||||| || |||||||||    |||| ||||||||||||||  |||||||||| |||| |||||||||  |||||  ||| |||||||||||||    
T  36483549 taaaatttaatatttggatactcttcggatacgtatcggaaagtatcgggcaggtatcggtgcaggatacgcaggggatacggtacgtcatccattttga 36483450  T
Q  256 a 256  Q
    |    
T  36483449 a 36483449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 40412796 - 40412754
Alignment:
Q  18 aacacatcagtactcaaaacttaagttattttagttaacatta 60  Q
    ||||||||||||||||| | |||||||||||||||||||||||    
T  40412796 aacacatcagtactcaagagttaagttattttagttaacatta 40412754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 256
Target Start/End: Original strand, 2872914 - 2873014
Alignment:
Q  156 taaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgcatgatacgcagaagatacaatacatcatccattttga 255  Q
    |||||||| || || ||||||||||   |||| |||||| |||||||  |||||||||| |||| |||||||||  |||||  ||| |||||||||||||    
T  2872914 taaaatttcatatttggatactctccggatacgtatcgggaagtatcgggcaggtatcggtgcaggatacgcaggggatacggtacgtcatccattttga 2873013  T
Q  256 a 256  Q
    |    
T  2873014 a 2873014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 256
Target Start/End: Complemental strand, 6028601 - 6028501
Alignment:
Q  156 taaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgcatgatacgcagaagatacaatacatcatccattttga 255  Q
    ||||||||||| || ||||||||||   |||  ||||||||||||||  |||| ||||| |||| |||||||||  |||||  ||| |||||||||||||    
T  6028601 taaaatttaatatttggatactctcccgatatgtatcggaaagtatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattttga 6028502  T
Q  256 a 256  Q
    |    
T  6028501 a 6028501  T

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Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 256
Target Start/End: Complemental strand, 25022239 - 25022139
Alignment:
Q  156 taaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgcatgatacgcagaagatacaatacatcatccattttga 255  Q
    ||||||||||| || ||||||||||   |||| |||| | |||||||  |||||||||| |||| ||||||||| ||||||  ||  |||||||||||||    
T  25022239 taaaatttaatatttggatactctcccgatacgtatcaggaagtatcgggcaggtatcggtgcaggatacgcaggagatacggtatgtcatccattttga 25022140  T
Q  256 a 256  Q
    |    
T  25022139 a 25022139  T

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Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 23 - 62
Target Start/End: Original strand, 8170976 - 8171015
Alignment:
Q  23 atcagtactcaaaacttaagttattttagttaacattaat 62  Q
    |||||||||||| | |||||||||||||||||||||||||    
T  8170976 atcagtactcaagagttaagttattttagttaacattaat 8171015  T

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Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 211 - 253
Target Start/End: Original strand, 27109223 - 27109265
Alignment:
Q  211 atcgatgcatgatacgcagaagatacaatacatcatccatttt 253  Q
    |||||||||||||||| || |||||| ||||||||||||||||    
T  27109223 atcgatgcatgatacgtaggagatacgatacatcatccatttt 27109265  T

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Target: scaffold0285 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0285
Description:

Target: scaffold0285; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 87 - 256
Target Start/End: Complemental strand, 13432 - 13264
Alignment:
Q  87 tgcaggataattatcgcatactatcctgatatgtatcagaaagtatcggataattattttnnnnnnnnntaaaatttaatcttcggatactctcttaata 186  Q
    |||||||||||||||| ||||| | |||||| ||||||| ||| ||||||||||||||||         ||||||||||||||| ||||||||||| |||    
T  13432 tgcaggataattatcgaatactcttctgataagtatcaggaagcatcggataattatttttaaaaaaa-taaaatttaatcttcagatactctcttgata 13334  T
Q  187 catatcggaaagtatcatgcaggtatcgatgcatgatacgcagaagatacaatacatcatccattttgaa 256  Q
    | |||||| |||||||   ||||||||| |||| ||||||||| |||||| |||| ||||||||||||||    
T  13333 cgtatcgggaagtatctgacaggtatcggtgcaggatacgcaggagatacgatacgtcatccattttgaa 13264  T

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Target: scaffold0640 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0640
Description:

Target: scaffold0640; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 119 - 256
Target Start/End: Original strand, 8059 - 8196
Alignment:
Q  119 gtatcagaaagtatcggataattattttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgc 218  Q
    ||||| ||||||||| ||||||||||||         ||||||||||| || ||||||||||   |||| |||||| |||||||  |||||||||| |||    
T  8059 gtatcggaaagtatcagataattattttttttaaaaataaaatttaatatttggatactctccggatacgtatcgggaagtatcgggcaggtatcggtgc 8158  T
Q  219 atgatacgcagaagatacaatacatcatccattttgaa 256  Q
    | |||||||||  |||||  ||||||||||||||||||    
T  8159 aggatacgcaggggatacggtacatcatccattttgaa 8196  T

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Target: scaffold0250 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 119 - 256
Target Start/End: Complemental strand, 5663 - 5526
Alignment:
Q  119 gtatcagaaagtatcggataattattttnnnnnnnnntaaaatttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgc 218  Q
    ||||| |||||||||||| |||||||||         ||||||||||| || ||||||||||   |||| |||||| |||||||  |||||||||| |||    
T  5663 gtatcggaaagtatcggaaaattattttcttaaaaaataaaatttaatatttggatactctcccgatacgtatcgggaagtatcgggcaggtatcggtgc 5564  T
Q  219 atgatacgcagaagatacaatacatcatccattttgaa 256  Q
    | |||||||||  |||||  ||| || |||||||||||    
T  5563 aggatacgcaggggatacggtacgtcgtccattttgaa 5526  T

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Target: scaffold0240 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 253
Target Start/End: Complemental strand, 10710 - 10617
Alignment:
Q  160 atttaatcttcggatactctcttaatacatatcggaaagtatcatgcaggtatcgatgcatgatacgcagaagatacaatacatcatccatttt 253  Q
    ||||||||||| ||||||||| | |||| |||||  |||||||  ||| |||||| ||||||||||||||  ||||   |||||||||||||||    
T  10710 atttaatcttctgatactctcctgatacgtatcgagaagtatcgggcaagtatcggtgcatgatacgcaggggatatggtacatcatccatttt 10617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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