View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3434_low_45 (Length: 227)

Name: NF3434_low_45
Description: NF3434
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3434_low_45
NF3434_low_45
[»] chr5 (24 HSPs)
chr5 (77-177)||(42522851-42522951)
chr5 (120-177)||(21259804-21259861)
chr5 (126-177)||(1138599-1138650)
chr5 (126-177)||(15855883-15855934)
chr5 (126-177)||(16472995-16473046)
chr5 (126-177)||(21261983-21262034)
chr5 (126-177)||(35420692-35420743)
chr5 (94-167)||(2268672-2268745)
chr5 (121-177)||(12744866-12744922)
chr5 (121-177)||(13754366-13754422)
chr5 (126-177)||(1456102-1456153)
chr5 (126-177)||(12807951-12808002)
chr5 (94-136)||(21262041-21262083)
chr5 (126-177)||(24397325-24397377)
chr5 (121-177)||(37552383-37552439)
chr5 (121-177)||(37655227-37655282)
chr5 (101-136)||(1138657-1138692)
chr5 (126-177)||(4266022-4266073)
chr5 (126-177)||(20476471-20476522)
chr5 (101-136)||(20476529-20476564)
chr5 (134-177)||(35806975-35807018)
chr5 (126-177)||(43539147-43539198)
chr5 (94-132)||(28056194-28056232)
chr5 (91-136)||(35807033-35807078)
[»] chr7 (26 HSPs)
chr7 (101-177)||(35665671-35665747)
chr7 (121-177)||(34052319-34052375)
chr7 (126-177)||(30259146-30259197)
chr7 (126-177)||(38883261-38883312)
chr7 (126-176)||(30594734-30594784)
chr7 (126-177)||(24836060-24836111)
chr7 (121-177)||(40358155-40358211)
chr7 (126-177)||(3953122-3953173)
chr7 (126-177)||(10936550-10936601)
chr7 (126-177)||(25742511-25742562)
chr7 (126-177)||(35339358-35339409)
chr7 (126-177)||(45997588-45997639)
chr7 (130-175)||(48103410-48103455)
chr7 (126-177)||(9285794-9285845)
chr7 (126-177)||(9289861-9289912)
chr7 (101-136)||(30259104-30259139)
chr7 (94-129)||(33749749-33749784)
chr7 (126-175)||(20184318-20184368)
chr7 (94-136)||(31231645-31231687)
chr7 (126-177)||(31231694-31231747)
chr7 (94-136)||(45997539-45997581)
chr7 (101-130)||(21581184-21581213)
chr7 (126-175)||(37093810-37093859)
chr7 (132-177)||(40596771-40596816)
chr7 (104-136)||(12142291-12142323)
chr7 (101-129)||(35339316-35339344)
[»] scaffold0006 (1 HSPs)
scaffold0006 (94-177)||(72319-72402)
[»] chr4 (27 HSPs)
chr4 (126-177)||(35360716-35360767)
chr4 (126-177)||(55107564-55107615)
chr4 (126-177)||(530749-530800)
chr4 (126-177)||(1298952-1299003)
chr4 (121-176)||(27434651-27434706)
chr4 (126-177)||(52824279-52824330)
chr4 (121-176)||(4895013-4895068)
chr4 (126-177)||(13204417-13204468)
chr4 (126-177)||(18417697-18417748)
chr4 (126-177)||(20435220-20435271)
chr4 (126-177)||(23482001-23482052)
chr4 (101-140)||(43486238-43486277)
chr4 (126-175)||(24294509-24294558)
chr4 (101-136)||(1299010-1299045)
chr4 (126-177)||(4552825-4552876)
chr4 (101-136)||(4552883-4552918)
chr4 (126-177)||(16995634-16995685)
chr4 (101-136)||(20435178-20435213)
chr4 (126-177)||(21048785-21048835)
chr4 (101-136)||(24915832-24915867)
chr4 (126-177)||(28809927-28809978)
chr4 (126-175)||(23928647-23928696)
chr4 (126-175)||(32318800-32318849)
chr4 (126-177)||(4688327-4688379)
chr4 (126-177)||(24915874-24915930)
chr4 (121-176)||(24969616-24969674)
chr4 (126-177)||(42274572-42274624)
[»] chr1 (35 HSPs)
chr1 (126-177)||(28243998-28244049)
chr1 (126-177)||(48645094-48645145)
chr1 (126-177)||(3607809-3607860)
chr1 (126-177)||(5189509-5189560)
chr1 (126-177)||(9895293-9895344)
chr1 (126-177)||(19954991-19955042)
chr1 (101-176)||(28447928-28448003)
chr1 (126-177)||(42561375-42561426)
chr1 (126-177)||(50627171-50627222)
chr1 (126-176)||(2125150-2125200)
chr1 (121-177)||(1387818-1387874)
chr1 (121-177)||(2854607-2854663)
chr1 (121-177)||(23698577-23698633)
chr1 (121-177)||(48954289-48954345)
chr1 (126-177)||(6079424-6079475)
chr1 (126-177)||(14387095-14387146)
chr1 (126-177)||(19797061-19797112)
chr1 (126-177)||(27241004-27241055)
chr1 (94-136)||(3607760-3607802)
chr1 (126-177)||(9978131-9978183)
chr1 (126-177)||(15324666-15324718)
chr1 (126-177)||(27928377-27928429)
chr1 (126-177)||(47940650-47940702)
chr1 (101-136)||(27240962-27240997)
chr1 (126-176)||(18651330-18651380)
chr1 (126-177)||(27926330-27926383)
chr1 (94-132)||(49284325-49284363)
chr1 (127-176)||(16755266-16755315)
chr1 (126-175)||(27670185-27670234)
chr1 (126-177)||(4299472-4299526)
chr1 (126-177)||(21930420-21930472)
chr1 (126-177)||(26208464-26208516)
chr1 (126-170)||(29598370-29598414)
chr1 (126-177)||(50162618-50162670)
chr1 (126-177)||(51789677-51789726)
[»] chr2 (26 HSPs)
chr2 (126-175)||(6605777-6605826)
chr2 (126-177)||(3116916-3116967)
chr2 (126-177)||(9933649-9933700)
chr2 (126-177)||(12850622-12850673)
chr2 (101-148)||(17434735-17434782)
chr2 (126-177)||(24101912-24101963)
chr2 (126-177)||(34490496-34490547)
chr2 (126-177)||(45408665-45408716)
chr2 (121-177)||(9281422-9281478)
chr2 (126-177)||(16705773-16705824)
chr2 (126-177)||(34455925-34455976)
chr2 (126-172)||(22269767-22269813)
chr2 (126-175)||(2818708-2818757)
chr2 (101-134)||(26274472-26274505)
chr2 (126-177)||(1924060-1924112)
chr2 (126-177)||(20892924-20892976)
chr2 (126-177)||(23835916-23835968)
chr2 (101-136)||(3116974-3117009)
chr2 (126-177)||(9850838-9850888)
chr2 (101-136)||(9933607-9933642)
chr2 (101-136)||(40362580-40362615)
chr2 (101-136)||(42713815-42713850)
chr2 (126-175)||(7737106-7737156)
chr2 (126-174)||(27920615-27920663)
chr2 (126-177)||(29229443-29229495)
chr2 (126-177)||(29342743-29342795)
[»] scaffold0122 (2 HSPs)
scaffold0122 (126-177)||(45874-45925)
scaffold0122 (101-136)||(45932-45967)
[»] chr8 (22 HSPs)
chr8 (126-177)||(29781039-29781090)
chr8 (126-177)||(40891053-40891104)
chr8 (126-177)||(38405178-38405230)
chr8 (121-177)||(38520058-38520114)
chr8 (121-177)||(38629514-38629570)
chr8 (126-177)||(33100725-33100776)
chr8 (115-173)||(4035785-4035843)
chr8 (102-147)||(8920150-8920195)
chr8 (121-177)||(12234506-12234563)
chr8 (126-177)||(4262056-4262107)
chr8 (101-136)||(15882299-15882334)
chr8 (126-177)||(24211358-24211409)
chr8 (126-177)||(37114278-37114329)
chr8 (94-132)||(37114340-37114378)
chr8 (94-132)||(38405241-38405279)
chr8 (126-175)||(8210365-8210414)
chr8 (126-175)||(40393765-40393814)
chr8 (129-177)||(10778697-10778745)
chr8 (132-172)||(14834755-14834795)
chr8 (126-177)||(23940884-23940936)
chr8 (100-140)||(33940702-33940742)
chr8 (101-129)||(35467275-35467303)
[»] chr6 (17 HSPs)
chr6 (126-177)||(885425-885476)
chr6 (126-177)||(8091102-8091153)
chr6 (126-177)||(11687223-11687274)
chr6 (126-177)||(15546672-15546723)
chr6 (126-177)||(29609041-29609092)
chr6 (121-177)||(3369025-3369081)
chr6 (121-177)||(21380016-21380072)
chr6 (126-177)||(7808649-7808700)
chr6 (126-177)||(13172653-13172704)
chr6 (126-177)||(20501746-20501797)
chr6 (105-136)||(885483-885514)
chr6 (121-176)||(31764400-31764455)
chr6 (94-136)||(4238952-4238994)
chr6 (94-136)||(14393662-14393704)
chr6 (94-136)||(31764356-31764398)
chr6 (126-177)||(13439735-13439787)
chr6 (126-177)||(18998196-18998248)
[»] chr3 (39 HSPs)
chr3 (126-177)||(3970571-3970622)
chr3 (126-177)||(10441338-10441389)
chr3 (126-177)||(12838117-12838168)
chr3 (126-177)||(21969237-21969288)
chr3 (126-177)||(21991673-21991724)
chr3 (126-177)||(25488421-25488472)
chr3 (126-177)||(25561051-25561102)
chr3 (126-177)||(36329260-36329311)
chr3 (126-177)||(36657513-36657564)
chr3 (126-177)||(36822840-36822891)
chr3 (126-175)||(13078243-13078292)
chr3 (121-177)||(12789646-12789702)
chr3 (121-177)||(26906494-26906550)
chr3 (121-177)||(36278831-36278887)
chr3 (121-177)||(37506201-37506257)
chr3 (121-177)||(43150520-43150576)
chr3 (121-177)||(45487839-45487895)
chr3 (126-177)||(10017154-10017205)
chr3 (101-136)||(10254667-10254702)
chr3 (126-177)||(32237474-32237525)
chr3 (121-176)||(46664217-46664272)
chr3 (126-176)||(44920726-44920776)
chr3 (126-177)||(4072353-4072405)
chr3 (126-177)||(10117555-10117607)
chr3 (126-177)||(22101204-22101256)
chr3 (126-177)||(25446289-25446341)
chr3 (121-177)||(44611456-44611512)
chr3 (126-177)||(55340373-55340425)
chr3 (130-177)||(1476635-1476682)
chr3 (121-172)||(4567227-4567277)
chr3 (126-177)||(38125259-38125310)
chr3 (130-177)||(42105467-42105514)
chr3 (126-177)||(45712983-45713034)
chr3 (94-136)||(39677305-39677347)
chr3 (126-177)||(5529931-5529983)
chr3 (126-177)||(8831780-8831832)
chr3 (126-177)||(10254608-10254660)
chr3 (121-172)||(13724062-13724114)
chr3 (126-177)||(22176148-22176200)
[»] scaffold0107 (1 HSPs)
scaffold0107 (121-177)||(51103-51159)
[»] scaffold0118 (1 HSPs)
scaffold0118 (126-173)||(14486-14533)
[»] scaffold0391 (1 HSPs)
scaffold0391 (105-147)||(3644-3686)
[»] scaffold0653 (1 HSPs)
scaffold0653 (126-177)||(3473-3524)
[»] scaffold0188 (2 HSPs)
scaffold0188 (101-136)||(7184-7219)
scaffold0188 (126-175)||(7128-7177)
[»] scaffold0137 (1 HSPs)
scaffold0137 (126-177)||(10156-10206)
[»] scaffold0086 (2 HSPs)
scaffold0086 (126-177)||(48166-48217)
scaffold0086 (104-136)||(48224-48256)
[»] scaffold0163 (2 HSPs)
scaffold0163 (94-136)||(1970-2012)
scaffold0163 (126-177)||(2019-2071)
[»] scaffold0004 (1 HSPs)
scaffold0004 (91-147)||(90729-90785)


Alignment Details
Target: chr5 (Bit Score: 93; Significance: 2e-45; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 77 - 177
Target Start/End: Original strand, 42522851 - 42522951
Alignment:
Q  77 aggagaaaactaagtgatttttgcatggttcttaactaaattcatcatgattttctcaaagtttgttatatctaaataagatgtatttttagttaagaac 176  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42522851 aggagaaaactaagtgatttttgcatggttcttaactaaatttatcgtgattttctcaaagtttgttatatctaaataagatgtatttttagttaagaac 42522950  T
Q  177 c 177  Q
    |    
T  42522951 c 42522951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 120 - 177
Target Start/End: Original strand, 21259804 - 21259861
Alignment:
Q  120 atcatgattttctcaaagtttgttatatctaaataagatgtatttttagttaagaacc 177  Q
    ||||| ||||||||||||||||||||||| ||| || |||||||||||||||||||||    
T  21259804 atcataattttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaacc 21259861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 126 - 177
Target Start/End: Complemental strand, 1138650 - 1138599
Alignment:
Q  126 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaacc 177  Q
    ||||||||||||||||||||||| ||| || |||||||||||||||||||||    
T  1138650 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaacc 1138599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 126 - 177
Target Start/End: Complemental strand, 15855934 - 15855883
Alignment:
Q  126 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaacc 177  Q
    ||||||||||||||||||||||| ||| || |||||||||||||||||||||    
T  15855934 attttctcaaagtttgttatatcaaaaaaatatgtatttttagttaagaacc 15855883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 126 - 177
Target Start/End: Complemental strand, 16473046 - 16472995
Alignment:
Q  126 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaacc 177  Q
    ||||||||||||||||||||||| ||| || |||||||||||||||||||||    
T  16473046 attttctcaaagtttgttatatcaaaaaaatatgtatttttagttaagaacc 16472995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 126 - 177
Target Start/End: Complemental strand, 21262034 - 21261983
Alignment:
Q  126 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaacc 177  Q
    ||||||||||||||||||||||| ||| || |||||||||||||||||||||    
T  21262034 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaacc 21261983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 126 - 177
Target Start/End: Original strand, 35420692 - 35420743
Alignment:
Q  126 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaacc 177  Q
    ||||||||||||||||||||||| ||| || |||||||||||||||||||||    
T  35420692 attttctcaaagtttgttatatcaaaaaaatatgtatttttagttaagaacc 35420743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 94 - 167
Target Start/End: Complemental strand, 2268745 - 2268672
Alignment:
Q  94 tttttgcatggttcttaactaaattcatcatgattttctcaaagtttgttatatctaaataagatgtattttta 167  Q
    |||||| ||||||||||||||||||||   |||||| |||||||||||||||||  ||| || |||||||||||    
T  2268745 tttttgtatggttcttaactaaattcactgtgatttcctcaaagtttgttatattcaaaaaatatgtattttta 2268672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 121 - 177
Target Start/End: Complemental strand, 12744922 - 12744866
Alignment:
Q  121 tcatgattttctcaaagtttgttatatctaaataagatgtatttttagttaagaacc 177  Q
    |||| ||||||||||||||||||||||| ||| || |||||||||||||||| ||||    
T  12744922 tcataattttctcaaagtttgttatatccaaaaaatatgtatttttagttaaaaacc 12744866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 121 - 177
Target Start/End: Original strand, 13754366 - 13754422
Alignment:
Q  121 tcatgattttctcaaagtttgttatatctaaataagatgtatttttagttaagaacc 177  Q
    |||| |||||||||||||||| |||||| ||| || |||||||||||||||||||||    
T  13754366 tcataattttctcaaagtttgctatatcaaaaaaatatgtatttttagttaagaacc 13754422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 177
Target Start/End: Original strand, 1456102 - 1456153
Alignment:
Q  126 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaacc 177  Q
    ||||||||||||||||||||||| ||| || ||||||||||||| |||||||    
T  1456102 attttctcaaagtttgttatatccaaaaaatatgtatttttagtcaagaacc 1456153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 177
Target Start/End: Complemental strand, 12808002 - 12807951
Alignment:
Q  126 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaacc 177  Q
    ||||| ||||||||||||||||||||| || |||||||||||||||| ||||    
T  12808002 attttttcaaagtttgttatatctaaaaaatatgtatttttagttaaaaacc 12807951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 94 - 136
Target Start/End: Complemental strand, 21262083 - 21262041
Alignment:
Q  94 tttttgcatggttcttaactaaattcatcatgattttctcaaa 136  Q
    |||||| ||||||||||||||||||||||||||||| ||||||    
T  21262083 tttttgtatggttcttaactaaattcatcatgatttcctcaaa 21262041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 177
Target Start/End: Original strand, 24397325 - 24397377
Alignment:
Q  126 attttctcaaagtttgttatat-ctaaataagatgtatttttagttaagaacc 177  Q
    |||||||||||||||||||||| | ||| || |||||||||||||||||||||    
T  24397325 attttctcaaagtttgttatatccaaaaaaatatgtatttttagttaagaacc 24397377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 177
Target Start/End: Original strand, 37552383 - 37552439
Alignment:
Q  121 tcatgattttctcaaagtttgttatatctaaataagatgtatttttagttaagaacc 177  Q
    |||| ||||||||||||||||||||| | ||| || ||||||||||||| |||||||    
T  37552383 tcataattttctcaaagtttgttataacaaaaaaatatgtatttttagtcaagaacc 37552439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 177
Target Start/End: Original strand, 37655227 - 37655282
Alignment:
Q  121 tcatgattttctcaaagtttgttatatctaaataagatgtatttttagttaagaacc 177  Q
    |||| ||||||||||||||||||||| | ||| || |||||||||||||||||||||    
T  37655227 tcataattttctcaaagtttgttataac-aaaaaatatgtatttttagttaagaacc 37655282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 101 - 136
Target Start/End: Complemental strand, 1138692 - 1138657
Alignment:
Q  101 atggttcttaactaaattcatcatgattttctcaaa 136  Q
    ||||||||||||||||||||| ||||||||||||||    
T  1138692 atggttcttaactaaattcattatgattttctcaaa 1138657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 177
Target Start/End: Complemental strand, 4266073 - 4266022
Alignment:
Q  126 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaacc 177  Q
    ||||||| ||||||||||| ||| ||| || |||||||||||||||||||||    
T  4266073 attttcttaaagtttgttacatccaaaaaatatgtatttttagttaagaacc 4266022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 177
Target Start/End: Complemental strand, 20476522 - 20476471
Alignment:
Q  126 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaacc 177  Q
    ||||||||||| |||||||||||  || || |||||||||||||||||||||    
T  20476522 attttctcaaaatttgttatatcacaaaaatatgtatttttagttaagaacc 20476471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 101 - 136
Target Start/End: Complemental strand, 20476564 - 20476529
Alignment:
Q  101 atggttcttaactaaattcatcatgattttctcaaa 136  Q
    ||||||||||||||||||||||||||||| ||||||    
T  20476564 atggttcttaactaaattcatcatgatttcctcaaa 20476529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 177
Target Start/End: Complemental strand, 35807018 - 35806975
Alignment:
Q  134 aaagtttgttatatctaaataagatgtatttttagttaagaacc 177  Q
    ||||||||||||||  ||| ||||||||||||||||||||||||    
T  35807018 aaagtttgttatattcaaaaaagatgtatttttagttaagaacc 35806975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 177
Target Start/End: Complemental strand, 43539198 - 43539147
Alignment:
Q  126 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaacc 177  Q
    ||||||||||||||||||||||| ||| || |||||||| ||||| ||||||    
T  43539198 attttctcaaagtttgttatatccaaaaaatatgtatttatagttcagaacc 43539147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 132
Target Start/End: Complemental strand, 28056232 - 28056194
Alignment:
Q  94 tttttgcatggttcttaactaaattcatcatgattttct 132  Q
    |||||| |||||||||||||||||| |||||||||||||    
T  28056232 tttttgtatggttcttaactaaatttatcatgattttct 28056194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 136
Target Start/End: Complemental strand, 35807078 - 35807033
Alignment:
Q  91 tgatttttgcatggttcttaactaaattcatcatgattttctcaaa 136  Q
    ||||||||| |||||||| | ||||||||| |||||||||||||||    
T  35807078 tgatttttgtatggttctaacctaaattcaccatgattttctcaaa 35807033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 45; Significance: 9e-17; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 101 - 177
Target Start/End: Original strand, 35665671 - 35665747
Alignment:
Q  101 atggttcttaactaaattcatcatgattttctcaaagtttgttatatctaaataagatgtatttttagttaagaacc 177  Q
    ||||||||||||||||   | ||||||||||||||||||||||||||| ||| || |||||||||||||||| ||||    
T  35665671 atggttcttaactaaaaataccatgattttctcaaagtttgttatatccaaaaaatatgtatttttagttaaaaacc 35665747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 121 - 177
Target Start/End: Complemental strand, 34052375 - 34052319
Alignment:
Q  121 tcatgattttctcaaagtttgttatatctaaataagatgtatttttagttaagaacc 177  Q
    |||| ||||||||||||||||||||||| ||| || |||||||||||||||||||||    
T  34052375 tcataattttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaacc 34052319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 126 - 177
Target Start/End: Original strand, 30259146 - 30259197
Alignment:
Q  126 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaacc 177  Q
    ||||||||||||||||||||||| ||| || |||||||||||||||||||||    
T  30259146 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaacc 30259197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 126 - 177
Target Start/End: Complemental strand, 38883312 - 38883261
Alignment:
Q  126 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaacc 177  Q
    ||||||||||||||||||||||| ||| || |||||||||||||||||||||    
T  38883312 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaacc 38883261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 126 - 176
Target Start/End: Complemental strand, 30594784 - 30594734
Alignment:
Q  126 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaac 176  Q
    ||||||||||||||||||||||| ||| || ||||||||||||||||||||    
T  30594784 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaac 30594734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 126 - 177
Target Start/End: Complemental strand, 24836111 - 24836060
Alignment:
Q  126 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaacc 177  Q
    ||||||||||||||||||||||| ||| || |||||||||||||| ||||||    
T  24836111 attttctcaaagtttgttatatccaaaaaatatgtatttttagttnagaacc 24836060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 121 - 177
Target Start/End: Complemental strand, 40358211 - 40358155
Alignment:
Q  121 tcatgattttctcaaagtttgttatatctaaataagatgtatttttagttaagaacc 177  Q
    |||| ||||||||||||||||||||||| ||| || ||| |||||||||||||||||    
T  40358211 tcataattttctcaaagtttgttatatcaaaaaaatatgcatttttagttaagaacc 40358155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 177
Target Start/End: Original strand, 3953122 - 3953173
Alignment:
Q  126 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaacc 177  Q
    |||||| |||||||||||||||| ||| || |||||||||||||||||||||    
T  3953122 attttcacaaagtttgttatatccaaaaaatatgtatttttagttaagaacc 3953173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 177
Target Start/End: Original strand, 10936550 - 10936601
Alignment:
Q  126 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaacc 177  Q
    ||||||||||||||||||||| | ||| || |||||||||||||||||||||    
T  10936550 attttctcaaagtttgttataaccaaaaaatatgtatttttagttaagaacc 10936601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 177
Target Start/End: Original strand, 25742511 - 25742562
Alignment:
Q  126 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaacc 177  Q
    ||||||||||||||||||||||| ||| || |||||||||||||||| ||||    
T  25742511 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaacaacc 25742562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 177
Target Start/End: Original strand, 35339358 - 35339409
Alignment:
Q  126 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaacc 177  Q
    ||||||||||||||||||||||| ||| || ||||||||||| |||||||||    
T  35339358 attttctcaaagtttgttatatccaaaaaatatgtatttttatttaagaacc 35339409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 177
Target Start/End: Original strand, 45997588 - 45997639
Alignment:
Q  126 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaacc 177  Q
    ||||||||||||||| ||||||| ||| || |||||||||||||||||||||    
T  45997588 attttctcaaagtttattatatccaaaaaatatgtatttttagttaagaacc 45997639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 130 - 175
Target Start/End: Complemental strand, 48103455 - 48103410
Alignment:
Q  130 tctcaaagtttgttatatctaaataagatgtatttttagttaagaa 175  Q
    ||||||||||||||||||| ||| || |||||||||||||||||||    
T  48103455 tctcaaagtttgttatatccaaaaaatatgtatttttagttaagaa 48103410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 177
Target Start/End: Original strand, 9285794 - 9285845
Alignment:
Q  126 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaacc 177  Q
    ||||| ||||||||||||||||| ||| || ||||||||||| |||||||||    
T  9285794 attttatcaaagtttgttatatccaaaaaatatgtatttttatttaagaacc 9285845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 177
Target Start/End: Original strand, 9289861 - 9289912
Alignment:
Q  126 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaacc 177  Q
    ||||| ||||||||||||||||| ||| || ||||||||||| |||||||||    
T  9289861 attttatcaaagtttgttatatccaaaaaatatgtatttttatttaagaacc 9289912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 101 - 136
Target Start/End: Original strand, 30259104 - 30259139
Alignment:
Q  101 atggttcttaactaaattcatcatgattttctcaaa 136  Q
    |||||||||||||||||||| |||||||||||||||    
T  30259104 atggttcttaactaaattcaccatgattttctcaaa 30259139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 129
Target Start/End: Complemental strand, 33749784 - 33749749
Alignment:
Q  94 tttttgcatggttcttaactaaattcatcatgattt 129  Q
    |||||| |||||||||||||||||||||||||||||    
T  33749784 tttttgtatggttcttaactaaattcatcatgattt 33749749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 175
Target Start/End: Original strand, 20184318 - 20184368
Alignment:
Q  126 attttctcaaagtttgttatat-ctaaataagatgtatttttagttaagaa 175  Q
    |||||||||||||||||||||| | ||| || |||||||||||||||||||    
T  20184318 attttctcaaagtttgttatatccaaaaaaatatgtatttttagttaagaa 20184368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 136
Target Start/End: Original strand, 31231645 - 31231687
Alignment:
Q  94 tttttgcatggttcttaactaaattcatcatgattttctcaaa 136  Q
    |||||| |||||||||||||||||||| |||||||| ||||||    
T  31231645 tttttgtatggttcttaactaaattcaccatgatttcctcaaa 31231687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 177
Target Start/End: Original strand, 31231694 - 31231747
Alignment:
Q  126 attttctcaaagtttgttata--tctaaataagatgtatttttagttaagaacc 177  Q
    |||||||||||||||||||||  || ||| || |||||||||||||||||||||    
T  31231694 attttctcaaagtttgttatatgtccaaaaaatatgtatttttagttaagaacc 31231747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 136
Target Start/End: Original strand, 45997539 - 45997581
Alignment:
Q  94 tttttgcatggttcttaactaaattcatcatgattttctcaaa 136  Q
    |||||| |||||||||||||||||||| |||||||| ||||||    
T  45997539 tttttgtatggttcttaactaaattcaccatgatttcctcaaa 45997581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 101 - 130
Target Start/End: Original strand, 21581184 - 21581213
Alignment:
Q  101 atggttcttaactaaattcatcatgatttt 130  Q
    ||||||||||||||||||||||||||||||    
T  21581184 atggttcttaactaaattcatcatgatttt 21581213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 175
Target Start/End: Complemental strand, 37093859 - 37093810
Alignment:
Q  126 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaa 175  Q
    ||||||||||||||||||||||| ||| || || |||||||| |||||||    
T  37093859 attttctcaaagtttgttatatccaaaaaatatatatttttaattaagaa 37093810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 177
Target Start/End: Original strand, 40596771 - 40596816
Alignment:
Q  132 tcaaagtttgttatatctaaataagatgtatttttagttaagaacc 177  Q
    ||||||||||||||| | ||| ||| ||||||||||||||||||||    
T  40596771 tcaaagtttgttataacaaaaaaagttgtatttttagttaagaacc 40596816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 136
Target Start/End: Complemental strand, 12142323 - 12142291
Alignment:
Q  104 gttcttaactaaattcatcatgattttctcaaa 136  Q
    ||||||||||||||||| |||||||||||||||    
T  12142323 gttcttaactaaattcaccatgattttctcaaa 12142291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 129
Target Start/End: Original strand, 35339316 - 35339344
Alignment:
Q  101 atggttcttaactaaattcatcatgattt 129  Q
    |||||||||||||||||||||||||||||    
T  35339316 atggttcttaactaaattcatcatgattt 35339344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 94 - 177
Target Start/End: Original strand, 72319 - 72402
Alignment:
Q  94 tttttgcatggttcttaactaaattcatcatgattttctcaaagtttgttatatctaaataagatgtatttttagttaagaacc 177  Q
    |||||| ||| |||||| ||||||||| ||| ||||||||| ||||||||||||| ||| || |||||||||||||||| ||||    
T  72319 tttttgtatgattcttagctaaattcaccataattttctcagagtttgttatatccaaaaaatatgtatttttagttaaaaacc 72402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 44; Significance: 3e-16; HSPs: 27)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 126 - 177
Target Start/End: Complemental strand, 35360767 - 35360716
Alignment:
Q  126 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaacc 177  Q
    ||||||||||||||||||||||||||| || |||||||||||||||||||||    
T  35360767 attttctcaaagtttgttatatctaaaaaatatgtatttttagttaagaacc 35360716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 126 - 177
Target Start/End: Complemental strand, 55107615 - 55107564
Alignment:
Q  126 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaacc 177  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  55107615 attttctcaaagtttgttatatccaaataatatgtatttttagttaagaacc 55107564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 126 - 177
Target Start/End: Original strand, 530749 - 530800
Alignment:
Q  126 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaacc 177  Q
    ||||||||||||||||||||||| ||| || |||||||||||||||||||||    
T  530749 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaacc 530800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 126 - 177
Target Start/End: Complemental strand, 1299003 - 1298952
Alignment:
Q  126 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaacc 177  Q
    ||||||||||||||||||||||| ||| || |||||||||||||||||||||    
T  1299003 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaacc 1298952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 121 - 176
Target Start/End: Complemental strand, 27434706 - 27434651
Alignment:
Q  121 tcatgattttctcaaagtttgttatatctaaataagatgtatttttagttaagaac 176  Q
    |||| ||||||||||||||||||||||| ||| || ||||||||||||||||||||    
T  27434706 tcataattttctcaaagtttgttatatccaaaaaaaatgtatttttagttaagaac 27434651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 126 - 177
Target Start/End: Complemental strand, 52824330 - 52824279
Alignment:
Q  126 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaacc 177  Q
    ||||||||||||||| ||||||||||| || |||||||||||||||||||||    
T  52824330 attttctcaaagtttattatatctaaaaaatatgtatttttagttaagaacc 52824279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 176
Target Start/End: Complemental strand, 4895068 - 4895013
Alignment:
Q  121 tcatgattttctcaaagtttgttatatctaaataagatgtatttttagttaagaac 176  Q
    |||| ||||||||||||||||||||||  ||| || ||||||||||||||||||||    
T  4895068 tcataattttctcaaagtttgttatattcaaaaaatatgtatttttagttaagaac 4895013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 177
Target Start/End: Complemental strand, 13204468 - 13204417
Alignment:
Q  126 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaacc 177  Q
    |||||| |||||||||||||||| ||| || |||||||||||||||||||||    
T  13204468 attttcacaaagtttgttatatccaaaaaatatgtatttttagttaagaacc 13204417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 177
Target Start/End: Complemental strand, 18417748 - 18417697
Alignment:
Q  126 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaacc 177  Q
    ||||||||||||||||||||||| ||| || || ||||||||||||||||||    
T  18417748 attttctcaaagtttgttatatccaaaaaatatatatttttagttaagaacc 18417697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 177
Target Start/End: Original strand, 20435220 - 20435271
Alignment:
Q  126 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaacc 177  Q
    |||||||| |||||||||||||| ||| || |||||||||||||||||||||    
T  20435220 attttctcgaagtttgttatatccaaaaaatatgtatttttagttaagaacc 20435271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 177
Target Start/End: Original strand, 23482001 - 23482052
Alignment:
Q  126 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaacc 177  Q
    ||||||||||| |||||||||| |||| ||||||||| ||||||||||||||    
T  23482001 attttctcaaaatttgttatatataaaaaagatgtatatttagttaagaacc 23482052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 101 - 140
Target Start/End: Original strand, 43486238 - 43486277
Alignment:
Q  101 atggttcttaactaaattcatcatgattttctcaaagttt 140  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  43486238 atggttcttaactaaattcaccatgattttctcaaagttt 43486277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 175
Target Start/End: Complemental strand, 24294558 - 24294509
Alignment:
Q  126 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaa 175  Q
    ||||||||||||||||||||||| ||| || ||||||||||| |||||||    
T  24294558 attttctcaaagtttgttatatcaaaaaaatatgtatttttaattaagaa 24294509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 101 - 136
Target Start/End: Complemental strand, 1299045 - 1299010
Alignment:
Q  101 atggttcttaactaaattcatcatgattttctcaaa 136  Q
    |||||||||||||||||||| |||||||||||||||    
T  1299045 atggttcttaactaaattcaccatgattttctcaaa 1299010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 177
Target Start/End: Complemental strand, 4552876 - 4552825
Alignment:
Q  126 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaacc 177  Q
    ||||||||||||||||||||||| ||| || || ||||||||||||| ||||    
T  4552876 attttctcaaagtttgttatatccaaaaaatatttatttttagttaaaaacc 4552825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 101 - 136
Target Start/End: Complemental strand, 4552918 - 4552883
Alignment:
Q  101 atggttcttaactaaattcatcatgattttctcaaa 136  Q
    ||||||||||||||||||||||||||||| ||||||    
T  4552918 atggttcttaactaaattcatcatgatttcctcaaa 4552883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 177
Target Start/End: Original strand, 16995634 - 16995685
Alignment:
Q  126 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaacc 177  Q
    ||||| ||| ||||||||||||||||| |||||||||| |||||||| ||||    
T  16995634 attttttcagagtttgttatatctaaaaaagatgtattgttagttaaaaacc 16995685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 101 - 136
Target Start/End: Original strand, 20435178 - 20435213
Alignment:
Q  101 atggttcttaactaaattcatcatgattttctcaaa 136  Q
    ||||||||||||||||||||||||||||| ||||||    
T  20435178 atggttcttaactaaattcatcatgatttcctcaaa 20435213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 177
Target Start/End: Original strand, 21048785 - 21048835
Alignment:
Q  126 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaacc 177  Q
    |||||||| |||||||||||||| ||| || |||||||||||||||||||||    
T  21048785 attttctcgaagtttgttatatcaaaa-aatatgtatttttagttaagaacc 21048835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 101 - 136
Target Start/End: Original strand, 24915832 - 24915867
Alignment:
Q  101 atggttcttaactaaattcatcatgattttctcaaa 136  Q
    |||||||||||||||||||| |||||||||||||||    
T  24915832 atggttcttaactaaattcaccatgattttctcaaa 24915867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 177
Target Start/End: Original strand, 28809927 - 28809978
Alignment:
Q  126 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaacc 177  Q
    ||||||||||| ||||||||||| ||| || |||||||| ||||||||||||    
T  28809927 attttctcaaaatttgttatatccaaaaaatatgtatttctagttaagaacc 28809978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 175
Target Start/End: Original strand, 23928647 - 23928696
Alignment:
Q  126 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaa 175  Q
    ||||||||||| ||||||||||| ||| || || ||||||||||||||||    
T  23928647 attttctcaaaatttgttatatccaaaaaaaatatatttttagttaagaa 23928696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 175
Target Start/End: Original strand, 32318800 - 32318849
Alignment:
Q  126 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaa 175  Q
    ||||||||||||||||||||||| ||| || || |||||||| |||||||    
T  32318800 attttctcaaagtttgttatatccaaaaaatatatatttttaattaagaa 32318849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 177
Target Start/End: Original strand, 4688327 - 4688379
Alignment:
Q  126 attttctcaaagtttgttatat-ctaaataagatgtatttttagttaagaacc 177  Q
    |||||||||||||||||||||| | ||| || ||||||||||| |||||||||    
T  4688327 attttctcaaagtttgttatatccaaaaaaatatgtatttttaattaagaacc 4688379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 177
Target Start/End: Original strand, 24915874 - 24915930
Alignment:
Q  126 attttctcaaagtttgttatatc-----taaataagatgtatttttagttaagaacc 177  Q
    |||||||||||||||||||||||      |||||| |||||||||||||||||||||    
T  24915874 attttctcaaagtttgttatatccaaaaaaaataatatgtatttttagttaagaacc 24915930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 176
Target Start/End: Original strand, 24969616 - 24969674
Alignment:
Q  121 tcatgattttctcaaagtttgttatatc---taaataagatgtatttttagttaagaac 176  Q
    |||| |||||||||||||||||||||||    ||| || ||||||||||||||||||||    
T  24969616 tcataattttctcaaagtttgttatatccaaaaaaaaaaatgtatttttagttaagaac 24969674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 177
Target Start/End: Original strand, 42274572 - 42274624
Alignment:
Q  126 attttctcaaagtttgttatat-ctaaataagatgtatttttagttaagaacc 177  Q
    |||||||||||||||||||||| | ||| || || ||||||||||||||||||    
T  42274572 attttctcaaagtttgttatatccaaaaaaatatatatttttagttaagaacc 42274624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 44; Significance: 3e-16; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 126 - 177
Target Start/End: Complemental strand, 28244049 - 28243998
Alignment:
Q  126 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaacc 177  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  28244049 attttctcaaagtttgttatatccaaaaaagatgtatttttagttaagaacc 28243998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 126 - 177
Target Start/End: Original strand, 48645094 - 48645145
Alignment:
Q  126 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaacc 177  Q
    ||||||||||||||||||||||||||| || |||||||||||||||||||||    
T  48645094 attttctcaaagtttgttatatctaaaaaatatgtatttttagttaagaacc 48645145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 126 - 177
Target Start/End: Original strand, 3607809 - 3607860
Alignment:
Q  126 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaacc 177  Q
    ||||||||||||||||||||||| ||| || |||||||||||||||||||||    
T  3607809 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaacc 3607860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 126 - 177
Target Start/End: Complemental strand, 5189560 - 5189509
Alignment:
Q  126 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaacc 177  Q
    ||||||||||||||||||||||| ||| || |||||||||||||||||||||    
T  5189560 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaacc 5189509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 126 - 177
Target Start/End: Complemental strand, 9895344 - 9895293
Alignment:
Q  126 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaacc 177  Q
    ||||||||||||||||||||||| ||| || |||||||||||||||||||||    
T  9895344 attttctcaaagtttgttatatcaaaaaaatatgtatttttagttaagaacc 9895293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 126 - 177
Target Start/End: Original strand, 19954991 - 19955042
Alignment:
Q  126 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaacc 177  Q
    ||||||||||||||||||||||| ||| || |||||||||||||||||||||    
T  19954991 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaacc 19955042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 101 - 176
Target Start/End: Original strand, 28447928 - 28448003
Alignment:
Q  101 atggttcttaactaaattcatcatgattttctcaaagtttgttatatctaaataagatgtatttttagttaagaac 176  Q
    ||||||||||| |||||| |  |||||||||||||||||||||||||  ||| ||||| |||||||||||| ||||    
T  28447928 atggttcttaattaaatttactatgattttctcaaagtttgttatattaaaaaaagatatatttttagttatgaac 28448003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 126 - 177
Target Start/End: Original strand, 42561375 - 42561426
Alignment:
Q  126 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaacc 177  Q
    ||||||||||||||||||||||| ||| || |||||||||||||||||||||    
T  42561375 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaacc 42561426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 126 - 177
Target Start/End: Complemental strand, 50627222 - 50627171
Alignment:
Q  126 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaacc 177  Q
    ||||||||||||||||||||||| ||| || |||||||||||||||||||||    
T  50627222 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaacc 50627171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 126 - 176
Target Start/End: Original strand, 2125150 - 2125200
Alignment:
Q  126 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaac 176  Q
    ||||||||||||||||||||||| ||| || ||||||||||||||||||||    
T  2125150 attttctcaaagtttgttatatcaaaaaaatatgtatttttagttaagaac 2125200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 121 - 177
Target Start/End: Complemental strand, 1387874 - 1387818
Alignment:
Q  121 tcatgattttctcaaagtttgttatatctaaataagatgtatttttagttaagaacc 177  Q
    |||| ||||||||||||||| ||||||| ||| || |||||||||||||||||||||    
T  1387874 tcataattttctcaaagtttattatatccaaaaaatatgtatttttagttaagaacc 1387818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 121 - 177
Target Start/End: Original strand, 2854607 - 2854663
Alignment:
Q  121 tcatgattttctcaaagtttgttatatctaaataagatgtatttttagttaagaacc 177  Q
    |||| ||||||||||||||||||||||| ||| || || ||||||||||||||||||    
T  2854607 tcataattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaacc 2854663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 121 - 177
Target Start/End: Original strand, 23698577 - 23698633
Alignment:
Q  121 tcatgattttctcaaagtttgttatatctaaataagatgtatttttagttaagaacc 177  Q
    |||| ||||||||||||||||||||||| ||| || || ||||||||||||||||||    
T  23698577 tcataattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaacc 23698633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 121 - 177
Target Start/End: Original strand, 48954289 - 48954345
Alignment:
Q  121 tcatgattttctcaaagtttgttatatctaaataagatgtatttttagttaagaacc 177  Q
    |||| ||||||||||||||||||||||| ||| || || ||||||||||||||||||    
T  48954289 tcataattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaacc 48954345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 177
Target Start/End: Complemental strand, 6079475 - 6079424
Alignment:
Q  126 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaacc 177  Q
    ||||||||||||||||||||||| ||| || ||||||||||||| |||||||    
T  6079475 attttctcaaagtttgttatatccaaaaaatatgtatttttagtgaagaacc 6079424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 177
Target Start/End: Original strand, 14387095 - 14387146
Alignment:
Q  126 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaacc 177  Q
    ||||||||||||||| ||||||| ||| || |||||||||||||||||||||    
T  14387095 attttctcaaagtttattatatccaaaaaatatgtatttttagttaagaacc 14387146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 177
Target Start/End: Original strand, 19797061 - 19797112
Alignment:
Q  126 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaacc 177  Q
    ||||| ||||||||||||||||| ||| || |||||||||||||||||||||    
T  19797061 attttttcaaagtttgttatatccaaaaaatatgtatttttagttaagaacc 19797112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 177
Target Start/End: Original strand, 27241004 - 27241055
Alignment:
Q  126 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaacc 177  Q
    ||||||||||||||||||||||| ||| || || ||||||||||||||||||    
T  27241004 attttctcaaagtttgttatatccaaaaaatatatatttttagttaagaacc 27241055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 94 - 136
Target Start/End: Original strand, 3607760 - 3607802
Alignment:
Q  94 tttttgcatggttcttaactaaattcatcatgattttctcaaa 136  Q
    |||||| ||||||||||||||||||||||||||||| ||||||    
T  3607760 tttttgtatggttcttaactaaattcatcatgatttcctcaaa 3607802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 177
Target Start/End: Original strand, 9978131 - 9978183
Alignment:
Q  126 attttctcaaagtttgttatat-ctaaataagatgtatttttagttaagaacc 177  Q
    |||||||||||||||||||||| | ||| || |||||||||||||||||||||    
T  9978131 attttctcaaagtttgttatatccaaaaaaatatgtatttttagttaagaacc 9978183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 177
Target Start/End: Complemental strand, 15324718 - 15324666
Alignment:
Q  126 attttctcaaagtttgttatat-ctaaataagatgtatttttagttaagaacc 177  Q
    |||||||||||||||||||||| | ||| || |||||||||||||||||||||    
T  15324718 attttctcaaagtttgttatatccaaaaaaatatgtatttttagttaagaacc 15324666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 177
Target Start/End: Original strand, 27928377 - 27928429
Alignment:
Q  126 attttctcaaagtttgttatat-ctaaataagatgtatttttagttaagaacc 177  Q
    |||||||||||||||||||||| | ||| || |||||||||||||||||||||    
T  27928377 attttctcaaagtttgttatatccaaaaaaatatgtatttttagttaagaacc 27928429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 177
Target Start/End: Original strand, 47940650 - 47940702
Alignment:
Q  126 attttctcaaagtttgttatat-ctaaataagatgtatttttagttaagaacc 177  Q
    |||||||||||||||||||||| | ||| || |||||||||||||||||||||    
T  47940650 attttctcaaagtttgttatatccaaaaaaatatgtatttttagttaagaacc 47940702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 101 - 136
Target Start/End: Original strand, 27240962 - 27240997
Alignment:
Q  101 atggttcttaactaaattcatcatgattttctcaaa 136  Q
    |||||||||||||||||||| |||||||||||||||    
T  27240962 atggttcttaactaaattcaccatgattttctcaaa 27240997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 176
Target Start/End: Original strand, 18651330 - 18651380
Alignment:
Q  126 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaac 176  Q
    ||||||||||| ||||||||| ||||| || ||||||||||| ||||||||    
T  18651330 attttctcaaaatttgttataactaaaaaaaatgtatttttatttaagaac 18651380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 177
Target Start/End: Original strand, 27926330 - 27926383
Alignment:
Q  126 attttctcaaagtttgttatatc--taaataagatgtatttttagttaagaacc 177  Q
    |||||||||||||||||||||||   ||| || |||||||||||||||||||||    
T  27926330 attttctcaaagtttgttatatccaaaaaaaatatgtatttttagttaagaacc 27926383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 132
Target Start/End: Original strand, 49284325 - 49284363
Alignment:
Q  94 tttttgcatggttcttaactaaattcatcatgattttct 132  Q
    |||||| |||||||||||||||||||| |||||||||||    
T  49284325 tttttgtatggttcttaactaaattcaccatgattttct 49284363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 176
Target Start/End: Complemental strand, 16755315 - 16755266
Alignment:
Q  127 ttttctcaaagtttgttatatctaaataagatgtatttttagttaagaac 176  Q
    |||| ||||||||||||||||| |||  | ||||||||||||||||||||    
T  16755315 ttttttcaaagtttgttatatccaaaacatatgtatttttagttaagaac 16755266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 175
Target Start/End: Complemental strand, 27670234 - 27670185
Alignment:
Q  126 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaa 175  Q
    ||||||||||||||| ||||||  ||| || |||||||||||||||||||    
T  27670234 attttctcaaagttttttatattcaaaaaatatgtatttttagttaagaa 27670185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 177
Target Start/End: Original strand, 4299472 - 4299526
Alignment:
Q  126 attttctcaaagtttgttatatc---taaataagatgtatttttagttaagaacc 177  Q
    |||||||||||||||||||||||    ||| || |||||||||||||||||||||    
T  4299472 attttctcaaagtttgttatatccaaaaaaaaatatgtatttttagttaagaacc 4299526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 177
Target Start/End: Complemental strand, 21930472 - 21930420
Alignment:
Q  126 attttctcaaagtttgttatatctaaataag-atgtatttttagttaagaacc 177  Q
    ||||||| ||||||||||||||| ||| ||  |||||||||||||||||||||    
T  21930472 attttcttaaagtttgttatatccaaaaaaatatgtatttttagttaagaacc 21930420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 177
Target Start/End: Complemental strand, 26208516 - 26208464
Alignment:
Q  126 attttctcaaagtttgttatat-ctaaataagatgtatttttagttaagaacc 177  Q
    |||||||||||||||||||||| | ||| || |||||||||||||| ||||||    
T  26208516 attttctcaaagtttgttatatccaaaaaaatatgtatttttagttgagaacc 26208464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 170
Target Start/End: Complemental strand, 29598414 - 29598370
Alignment:
Q  126 attttctcaaagtttgttatatctaaataagatgtatttttagtt 170  Q
    ||||||||||||||||||||||  ||| || ||||||||||||||    
T  29598414 attttctcaaagtttgttatattaaaaaaatatgtatttttagtt 29598370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 177
Target Start/End: Original strand, 50162618 - 50162670
Alignment:
Q  126 attttctcaaagtttgttatat-ctaaataagatgtatttttagttaagaacc 177  Q
    |||||||||||||||||||||| | ||| || ||||| |||||||||||||||    
T  50162618 attttctcaaagtttgttatatccaaaaaaatatgtaattttagttaagaacc 50162670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 177
Target Start/End: Original strand, 51789677 - 51789726
Alignment:
Q  126 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaacc 177  Q
    ||||||||||||| ||||||||||||  || |||| ||||||||||||||||    
T  51789677 attttctcaaagtatgttatatctaa--aaaatgtgtttttagttaagaacc 51789726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 126 - 175
Target Start/End: Complemental strand, 6605826 - 6605777
Alignment:
Q  126 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaa 175  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||||||    
T  6605826 attttctcaaagtttgttatatccaaataatatgtatttttagttaagaa 6605777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 126 - 177
Target Start/End: Complemental strand, 3116967 - 3116916
Alignment:
Q  126 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaacc 177  Q
    ||||||||||||||||||||||| ||| || |||||||||||||||||||||    
T  3116967 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaacc 3116916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 126 - 177
Target Start/End: Original strand, 9933649 - 9933700
Alignment:
Q  126 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaacc 177  Q
    ||||||||||||||| ||||||||||| || |||||||||||||||||||||    
T  9933649 attttctcaaagtttattatatctaaaaaatatgtatttttagttaagaacc 9933700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 126 - 177
Target Start/End: Original strand, 12850622 - 12850673
Alignment:
Q  126 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaacc 177  Q
    ||||||||||||||||||||||| ||| || |||||||||||||||||||||    
T  12850622 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaacc 12850673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 101 - 148
Target Start/End: Original strand, 17434735 - 17434782
Alignment:
Q  101 atggttcttaactaaattcatcatgattttctcaaagtttgttatatc 148  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||    
T  17434735 atggttcttaactaaattcaccataattttctcaaagtttgttatatc 17434782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 126 - 177
Target Start/End: Original strand, 24101912 - 24101963
Alignment:
Q  126 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaacc 177  Q
    ||||||||||||||||||||||| ||| || |||||||||||||||||||||    
T  24101912 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaacc 24101963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 126 - 177
Target Start/End: Complemental strand, 34490547 - 34490496
Alignment:
Q  126 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaacc 177  Q
    ||||||||||||||||||||||| ||| || |||||||||||||||||||||    
T  34490547 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaacc 34490496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 126 - 177
Target Start/End: Complemental strand, 45408716 - 45408665
Alignment:
Q  126 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaacc 177  Q
    ||||||||||||||||||||||| ||| || |||||||||||||||||||||    
T  45408716 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaacc 45408665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 121 - 177
Target Start/End: Original strand, 9281422 - 9281478
Alignment:
Q  121 tcatgattttctcaaagtttgttatatctaaataagatgtatttttagttaagaacc 177  Q
    |||| ||||||||||||||||||||||| ||| || || ||||||||||||||||||    
T  9281422 tcataattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaacc 9281478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 177
Target Start/End: Complemental strand, 16705824 - 16705773
Alignment:
Q  126 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaacc 177  Q
    ||||| ||||||||||||||||| ||| || |||||||||||||||||||||    
T  16705824 attttatcaaagtttgttatatccaaaaaatatgtatttttagttaagaacc 16705773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 177
Target Start/End: Complemental strand, 34455976 - 34455925
Alignment:
Q  126 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaacc 177  Q
    ||||||||||||||||||||||| ||| || ||||||||||| |||||||||    
T  34455976 attttctcaaagtttgttatatccaaaaaatatgtatttttaattaagaacc 34455925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 126 - 172
Target Start/End: Complemental strand, 22269813 - 22269767
Alignment:
Q  126 attttctcaaagtttgttatatctaaataagatgtatttttagttaa 172  Q
    ||||||||||||||||||||||| ||| || ||||||||||||||||    
T  22269813 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaa 22269767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 175
Target Start/End: Complemental strand, 2818757 - 2818708
Alignment:
Q  126 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaa 175  Q
    |||||||||||||||| |||||| ||| || |||||||||||||||||||    
T  2818757 attttctcaaagtttgatatatccaaaaaatatgtatttttagttaagaa 2818708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 134
Target Start/End: Complemental strand, 26274505 - 26274472
Alignment:
Q  101 atggttcttaactaaattcatcatgattttctca 134  Q
    ||||||||||||||||||||||||||||||||||    
T  26274505 atggttcttaactaaattcatcatgattttctca 26274472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 177
Target Start/End: Original strand, 1924060 - 1924112
Alignment:
Q  126 attttctcaaagtttgttatat-ctaaataagatgtatttttagttaagaacc 177  Q
    |||||||||||||||||||||| | ||| || |||||||||||||||||||||    
T  1924060 attttctcaaagtttgttatatccaaaaaaatatgtatttttagttaagaacc 1924112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 177
Target Start/End: Complemental strand, 20892976 - 20892924
Alignment:
Q  126 attttctcaaagtttgttatatcta-aataagatgtatttttagttaagaacc 177  Q
    ||||||||||||||||||||||| | || || |||||||||||||||||||||    
T  20892976 attttctcaaagtttgttatatccataaaaatatgtatttttagttaagaacc 20892924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 177
Target Start/End: Complemental strand, 23835968 - 23835916
Alignment:
Q  126 attttctcaaagtttgttatat-ctaaataagatgtatttttagttaagaacc 177  Q
    |||||||||||||||||||||| | ||| || |||||||||||||||||||||    
T  23835968 attttctcaaagtttgttatatccaaaaaaatatgtatttttagttaagaacc 23835916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 101 - 136
Target Start/End: Complemental strand, 3117009 - 3116974
Alignment:
Q  101 atggttcttaactaaattcatcatgattttctcaaa 136  Q
    ||||||||||||||||||||| ||||||||||||||    
T  3117009 atggttcttaactaaattcattatgattttctcaaa 3116974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 177
Target Start/End: Original strand, 9850838 - 9850888
Alignment:
Q  126 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaacc 177  Q
    ||||||||||| ||||||||||| ||| || |||||||||||||||||||||    
T  9850838 attttctcaaaatttgttatatcaaaa-aatatgtatttttagttaagaacc 9850888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 101 - 136
Target Start/End: Original strand, 9933607 - 9933642
Alignment:
Q  101 atggttcttaactaaattcatcatgattttctcaaa 136  Q
    |||||||||||||||||||| |||||||||||||||    
T  9933607 atggttcttaactaaattcaccatgattttctcaaa 9933642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 101 - 136
Target Start/End: Complemental strand, 40362615 - 40362580
Alignment:
Q  101 atggttcttaactaaattcatcatgattttctcaaa 136  Q
    |||||||||||||||||||| |||||||||||||||    
T  40362615 atggttcttaactaaattcaccatgattttctcaaa 40362580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 101 - 136
Target Start/End: Original strand, 42713815 - 42713850
Alignment:
Q  101 atggttcttaactaaattcatcatgattttctcaaa 136  Q
    |||||||||||||||||||| |||||||||||||||    
T  42713815 atggttcttaactaaattcaccatgattttctcaaa 42713850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 175
Target Start/End: Complemental strand, 7737156 - 7737106
Alignment:
Q  126 attttctcaaagtttgttatat-ctaaataagatgtatttttagttaagaa 175  Q
    |||||||||||||||||||||| | ||| || |||||||||||||||||||    
T  7737156 attttctcaaagtttgttatatccaaaaaaatatgtatttttagttaagaa 7737106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 174
Target Start/End: Complemental strand, 27920663 - 27920615
Alignment:
Q  126 attttctcaaagtttgttatatctaaataagatgtatttttagttaaga 174  Q
    ||||| ||||||||||||||||| ||| || ||||| ||||||||||||    
T  27920663 attttttcaaagtttgttatatccaaaaaatatgtagttttagttaaga 27920615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 177
Target Start/End: Original strand, 29229443 - 29229495
Alignment:
Q  126 attttctcaaa-gtttgttatatctaaataagatgtatttttagttaagaacc 177  Q
    ||||||||||| |||| ||||||| ||| || |||||||||||||||||||||    
T  29229443 attttctcaaaagtttattatatccaaaaaatatgtatttttagttaagaacc 29229495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 177
Target Start/End: Original strand, 29342743 - 29342795
Alignment:
Q  126 attttctcaaa-gtttgttatatctaaataagatgtatttttagttaagaacc 177  Q
    ||||||||||| |||| ||||||| ||| || |||||||||||||||||||||    
T  29342743 attttctcaaaagtttattatatccaaaaaatatgtatttttagttaagaacc 29342795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 126 - 177
Target Start/End: Complemental strand, 45925 - 45874
Alignment:
Q  126 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaacc 177  Q
    ||||||||||||||||||||||| ||| || |||||||||||||||||||||    
T  45925 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaacc 45874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 101 - 136
Target Start/End: Complemental strand, 45967 - 45932
Alignment:
Q  101 atggttcttaactaaattcatcatgattttctcaaa 136  Q
    |||||||||||||||||||| |||||||||||||||    
T  45967 atggttcttaactaaattcaccatgattttctcaaa 45932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 126 - 177
Target Start/End: Original strand, 29781039 - 29781090
Alignment:
Q  126 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaacc 177  Q
    ||||||||||||||||||||||| ||| || |||||||||||||||||||||    
T  29781039 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaacc 29781090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 126 - 177
Target Start/End: Complemental strand, 40891104 - 40891053
Alignment:
Q  126 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaacc 177  Q
    ||||||||||||||||||||||| ||| || |||||||||||||||||||||    
T  40891104 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaacc 40891053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 126 - 177
Target Start/End: Complemental strand, 38405230 - 38405178
Alignment:
Q  126 attttctcaaagtttgttatatctaaataa-gatgtatttttagttaagaacc 177  Q
    ||||||||||||||||||||||| ||| || ||||||||||||||||||||||    
T  38405230 attttctcaaagtttgttatatccaaaaaaagatgtatttttagttaagaacc 38405178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 121 - 177
Target Start/End: Complemental strand, 38520114 - 38520058
Alignment:
Q  121 tcatgattttctcaaagtttgttatatctaaataagatgtatttttagttaagaacc 177  Q
    |||| ||||||||||||||||||||||| ||| || || ||||||||||||||||||    
T  38520114 tcataattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaacc 38520058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 121 - 177
Target Start/End: Complemental strand, 38629570 - 38629514
Alignment:
Q  121 tcatgattttctcaaagtttgttatatctaaataagatgtatttttagttaagaacc 177  Q
    |||| ||||||||||||||| ||||||| ||| || |||||||||||||||||||||    
T  38629570 tcataattttctcaaagtttattatatccaaaaaatatgtatttttagttaagaacc 38629514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 177
Target Start/End: Original strand, 33100725 - 33100776
Alignment:
Q  126 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaacc 177  Q
    ||||||||||||||||||||||| ||| || |||| ||||||||||||||||    
T  33100725 attttctcaaagtttgttatatcaaaaaaatatgtttttttagttaagaacc 33100776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 115 - 173
Target Start/End: Complemental strand, 4035843 - 4035785
Alignment:
Q  115 aattcatcatgattttctcaaagtttgttatatctaaataagatgtatttttagttaag 173  Q
    |||||| ||||||||||||||| ||||||||||| ||| || || ||||||||||||||    
T  4035843 aattcaccatgattttctcaaaatttgttatatccaaaaaatatatatttttagttaag 4035785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 102 - 147
Target Start/End: Complemental strand, 8920195 - 8920150
Alignment:
Q  102 tggttcttaactaaattcatcatgattttctcaaagtttgttatat 147  Q
    ||||||||| ||||||||| ||| ||||||||||||||||||||||    
T  8920195 tggttcttacctaaattcaccataattttctcaaagtttgttatat 8920150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 121 - 177
Target Start/End: Complemental strand, 12234563 - 12234506
Alignment:
Q  121 tcatgattttctcaaagttt-gttatatctaaataagatgtatttttagttaagaacc 177  Q
    |||| ||||||||||||||| |||||||| ||| || |||||||||||||||||||||    
T  12234563 tcataattttctcaaagttttgttatatccaaaaaatatgtatttttagttaagaacc 12234506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 177
Target Start/End: Original strand, 4262056 - 4262107
Alignment:
Q  126 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaacc 177  Q
    ||||||||||||||||||||||  ||| || ||||||||||| |||||||||    
T  4262056 attttctcaaagtttgttatattcaaaaaatatgtatttttaattaagaacc 4262107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 101 - 136
Target Start/End: Complemental strand, 15882334 - 15882299
Alignment:
Q  101 atggttcttaactaaattcatcatgattttctcaaa 136  Q
    |||||||||||||||||||| |||||||||||||||    
T  15882334 atggttcttaactaaattcaccatgattttctcaaa 15882299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 177
Target Start/End: Original strand, 24211358 - 24211409
Alignment:
Q  126 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaacc 177  Q
    ||||||||| ||||||||||||||||| || |||||||| || |||||||||    
T  24211358 attttctcatagtttgttatatctaaaaaatatgtatttctatttaagaacc 24211409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 177
Target Start/End: Complemental strand, 37114329 - 37114278
Alignment:
Q  126 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaacc 177  Q
    ||||||||||||||| ||||||| ||| || ||||||||||| |||||||||    
T  37114329 attttctcaaagtttattatatccaaaaaatatgtatttttaattaagaacc 37114278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 132
Target Start/End: Complemental strand, 37114378 - 37114340
Alignment:
Q  94 tttttgcatggttcttaactaaattcatcatgattttct 132  Q
    |||||| |||||||||||||||||||| |||||||||||    
T  37114378 tttttgtatggttcttaactaaattcaccatgattttct 37114340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 132
Target Start/End: Complemental strand, 38405279 - 38405241
Alignment:
Q  94 tttttgcatggttcttaactaaattcatcatgattttct 132  Q
    |||||| ||||||||||||||||||||| ||||||||||    
T  38405279 tttttgtatggttcttaactaaattcataatgattttct 38405241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 175
Target Start/End: Complemental strand, 8210414 - 8210365
Alignment:
Q  126 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaa 175  Q
    ||||||||||||||||||||||| ||| || || ||| ||||||||||||    
T  8210414 attttctcaaagtttgttatatccaaaaaatatatatatttagttaagaa 8210365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 175
Target Start/End: Complemental strand, 40393814 - 40393765
Alignment:
Q  126 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaa 175  Q
    ||||||||||| |||||||||||  || || |||||||||||||||||||    
T  40393814 attttctcaaaatttgttatatcccaaaaatatgtatttttagttaagaa 40393765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 177
Target Start/End: Complemental strand, 10778745 - 10778697
Alignment:
Q  129 ttctcaaagtttgttatatctaaataagatgtatttttagttaagaacc 177  Q
    |||||||||||||||||| | | | || |||||||||||||||||||||    
T  10778745 ttctcaaagtttgttatagccacaaaaaatgtatttttagttaagaacc 10778697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 172
Target Start/End: Original strand, 14834755 - 14834795
Alignment:
Q  132 tcaaagtttgttatatctaaataagatgtatttttagttaa 172  Q
    ||||||||||||||||  ||| |||||||||||||||||||    
T  14834755 tcaaagtttgttatatacaaaaaagatgtatttttagttaa 14834795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 177
Target Start/End: Original strand, 23940884 - 23940936
Alignment:
Q  126 attttctcaaagtttgttatatct-aaataagatgtatttttagttaagaacc 177  Q
    |||||||||||||||||||||| | ||| || |||||||||||||||| ||||    
T  23940884 attttctcaaagtttgttatatttaaaaaaatatgtatttttagttaaaaacc 23940936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 140
Target Start/End: Complemental strand, 33940742 - 33940702
Alignment:
Q  100 catggttcttaactaaattcatcatgattttctcaaagttt 140  Q
    ||||||||||||||||||| | ||||||||||| |||||||    
T  33940742 catggttcttaactaaatttaccatgattttcttaaagttt 33940702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 129
Target Start/End: Complemental strand, 35467303 - 35467275
Alignment:
Q  101 atggttcttaactaaattcatcatgattt 129  Q
    |||||||||||||||||||||||||||||    
T  35467303 atggttcttaactaaattcatcatgattt 35467275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 126 - 177
Target Start/End: Complemental strand, 885476 - 885425
Alignment:
Q  126 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaacc 177  Q
    ||||||||||||||||||||||| ||| || |||||||||||||||||||||    
T  885476 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaacc 885425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 126 - 177
Target Start/End: Complemental strand, 8091153 - 8091102
Alignment:
Q  126 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaacc 177  Q
    ||||||||||||||||||||||| ||| || |||||||||||||||||||||    
T  8091153 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaacc 8091102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 126 - 177
Target Start/End: Original strand, 11687223 - 11687274
Alignment:
Q  126 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaacc 177  Q
    ||||||||||||||||||||||| ||| || |||||||||||||||||||||    
T  11687223 attttctcaaagtttgttatatcaaaaaaatatgtatttttagttaagaacc 11687274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 126 - 177
Target Start/End: Complemental strand, 15546723 - 15546672
Alignment:
Q  126 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaacc 177  Q
    ||||||||||||||||||||||| ||| || |||||||||||||||||||||    
T  15546723 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaacc 15546672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 126 - 177
Target Start/End: Complemental strand, 29609092 - 29609041
Alignment:
Q  126 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaacc 177  Q
    |||||||||||||||||||| || ||| ||||||||||||||||||||||||    
T  29609092 attttctcaaagtttgttatctccaaaaaagatgtatttttagttaagaacc 29609041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 121 - 177
Target Start/End: Complemental strand, 3369081 - 3369025
Alignment:
Q  121 tcatgattttctcaaagtttgttatatctaaataagatgtatttttagttaagaacc 177  Q
    |||| ||||||||||||||||||||||  ||| || |||||||||||||||||||||    
T  3369081 tcataattttctcaaagtttgttatattcaaaaaatatgtatttttagttaagaacc 3369025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 121 - 177
Target Start/End: Original strand, 21380016 - 21380072
Alignment:
Q  121 tcatgattttctcaaagtttgttatatctaaataagatgtatttttagttaagaacc 177  Q
    |||| |||||||||| |||||||||||| ||| || |||||||||||||||||||||    
T  21380016 tcataattttctcaatgtttgttatatccaaaaaatatgtatttttagttaagaacc 21380072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 177
Target Start/End: Complemental strand, 7808700 - 7808649
Alignment:
Q  126 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaacc 177  Q
    ||||||||||||||||||||||| ||| || |||||||||||||||| ||||    
T  7808700 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaaaaacc 7808649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 177
Target Start/End: Original strand, 13172653 - 13172704
Alignment:
Q  126 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaacc 177  Q
    ||||||||||||||||||||||| ||| || ||||||||||| |||||||||    
T  13172653 attttctcaaagtttgttatatccaaaaaatatgtatttttacttaagaacc 13172704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 177
Target Start/End: Complemental strand, 20501797 - 20501746
Alignment:
Q  126 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaacc 177  Q
    |||||||| |||||||||||||| ||| || |||||||||||||||||||||    
T  20501797 attttctcgaagtttgttatatccaaaaaatatgtatttttagttaagaacc 20501746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 105 - 136
Target Start/End: Complemental strand, 885514 - 885483
Alignment:
Q  105 ttcttaactaaattcatcatgattttctcaaa 136  Q
    ||||||||||||||||||||||||||||||||    
T  885514 ttcttaactaaattcatcatgattttctcaaa 885483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 176
Target Start/End: Original strand, 31764400 - 31764455
Alignment:
Q  121 tcatgattttctcaaagtttgttatatctaaataagatgtatttttagttaagaac 176  Q
    |||| |||||||||||||||||| |||| ||| || |||||| |||||||||||||    
T  31764400 tcataattttctcaaagtttgttgtatccaaaaaatatgtatctttagttaagaac 31764455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 136
Target Start/End: Complemental strand, 4238994 - 4238952
Alignment:
Q  94 tttttgcatggttcttaactaaattcatcatgattttctcaaa 136  Q
    |||||| ||||||||||| |||||||| |||||||||||||||    
T  4238994 tttttgtatggttcttaattaaattcaccatgattttctcaaa 4238952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 136
Target Start/End: Complemental strand, 14393704 - 14393662
Alignment:
Q  94 tttttgcatggttcttaactaaattcatcatgattttctcaaa 136  Q
    |||||| |||||||||||||||||||| |||||||| ||||||    
T  14393704 tttttgtatggttcttaactaaattcaccatgatttcctcaaa 14393662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 136
Target Start/End: Original strand, 31764356 - 31764398
Alignment:
Q  94 tttttgcatggttcttaactaaattcatcatgattttctcaaa 136  Q
    |||||| |||||||||||||||||||| ||| |||||||||||    
T  31764356 tttttgtatggttcttaactaaattcaccattattttctcaaa 31764398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 177
Target Start/End: Complemental strand, 13439787 - 13439735
Alignment:
Q  126 attttctcaaagtttgttatat-ctaaataagatgtatttttagttaagaacc 177  Q
    |||||||||||||||||||||| | ||| || |||||||||||| ||||||||    
T  13439787 attttctcaaagtttgttatatccaaaaaaatatgtatttttagctaagaacc 13439735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 177
Target Start/End: Original strand, 18998196 - 18998248
Alignment:
Q  126 attttctcaaagtttgttatatc-taaataagatgtatttttagttaagaacc 177  Q
    |||||||||||||||||||||||  ||| || ||||||||||| |||||||||    
T  18998196 attttctcaaagtttgttatatcaaaaaaaatatgtatttttaattaagaacc 18998248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 126 - 177
Target Start/End: Original strand, 3970571 - 3970622
Alignment:
Q  126 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaacc 177  Q
    ||||||||||||||||||||||| ||| || |||||||||||||||||||||    
T  3970571 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaacc 3970622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 126 - 177
Target Start/End: Original strand, 10441338 - 10441389
Alignment:
Q  126 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaacc 177  Q
    ||||||||||||||||||||||| ||| || |||||||||||||||||||||    
T  10441338 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaacc 10441389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 126 - 177
Target Start/End: Complemental strand, 12838168 - 12838117
Alignment:
Q  126 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaacc 177  Q
    ||||||||||||||||||||||| ||| || |||||||||||||||||||||    
T  12838168 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaacc 12838117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 126 - 177
Target Start/End: Original strand, 21969237 - 21969288
Alignment:
Q  126 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaacc 177  Q
    ||||||||||||||||||||||| ||| || |||||||||||||||||||||    
T  21969237 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaacc 21969288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 126 - 177
Target Start/End: Original strand, 21991673 - 21991724
Alignment:
Q  126 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaacc 177  Q
    ||||||||||||||||||||||| ||| || |||||||||||||||||||||    
T  21991673 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaacc 21991724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 126 - 177
Target Start/End: Original strand, 25488421 - 25488472
Alignment:
Q  126 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaacc 177  Q
    ||||||||||||||||||||||| ||| || |||||||||||||||||||||    
T  25488421 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaacc 25488472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 126 - 177
Target Start/End: Complemental strand, 25561102 - 25561051
Alignment:
Q  126 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaacc 177  Q
    ||||||||||||||||||||||| ||| || |||||||||||||||||||||    
T  25561102 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaacc 25561051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 126 - 177
Target Start/End: Original strand, 36329260 - 36329311
Alignment:
Q  126 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaacc 177  Q
    ||||||||||||||||||||||| ||| || |||||||||||||||||||||    
T  36329260 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaacc 36329311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 126 - 177
Target Start/End: Original strand, 36657513 - 36657564
Alignment:
Q  126 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaacc 177  Q
    ||||||||||||||||||||||| ||| || |||||||||||||||||||||    
T  36657513 attttctcaaagtttgttatatcaaaaaaatatgtatttttagttaagaacc 36657564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 126 - 177
Target Start/End: Original strand, 36822840 - 36822891
Alignment:
Q  126 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaacc 177  Q
    ||||||||||||||||||||||| ||| || |||||||||||||||||||||    
T  36822840 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaacc 36822891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 126 - 175
Target Start/End: Original strand, 13078243 - 13078292
Alignment:
Q  126 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaa 175  Q
    ||||||||||||||||||||||| ||| || |||||||||||||||||||    
T  13078243 attttctcaaagtttgttatatccaaaaaatatgtatttttagttaagaa 13078292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 121 - 177
Target Start/End: Complemental strand, 12789702 - 12789646
Alignment:
Q  121 tcatgattttctcaaagtttgttatatctaaataagatgtatttttagttaagaacc 177  Q
    |||| ||||| ||||||||||||||||| ||| || |||||||||||||||||||||    
T  12789702 tcataattttttcaaagtttgttatatccaaaaaatatgtatttttagttaagaacc 12789646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 121 - 177
Target Start/End: Complemental strand, 26906550 - 26906494
Alignment:
Q  121 tcatgattttctcaaagtttgttatatctaaataagatgtatttttagttaagaacc 177  Q
    |||| ||||||||||||||||||||||| ||| || || ||||||||||||||||||    
T  26906550 tcataattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaacc 26906494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 121 - 177
Target Start/End: Original strand, 36278831 - 36278887
Alignment:
Q  121 tcatgattttctcaaagtttgttatatctaaataagatgtatttttagttaagaacc 177  Q
    |||| ||||||||||||||||||||||| ||| || || ||||||||||||||||||    
T  36278831 tcataattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaacc 36278887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 121 - 177
Target Start/End: Original strand, 37506201 - 37506257
Alignment:
Q  121 tcatgattttctcaaagtttgttatatctaaataagatgtatttttagttaagaacc 177  Q
    |||| |||||||||||||||||||| || ||| || |||||||||||||||||||||    
T  37506201 tcataattttctcaaagtttgttatctccaaaaaaaatgtatttttagttaagaacc 37506257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 121 - 177
Target Start/End: Complemental strand, 43150576 - 43150520
Alignment:
Q  121 tcatgattttctcaaagtttgttatatctaaataagatgtatttttagttaagaacc 177  Q
    |||| ||||||||||||||||||||||| ||| || |||||||||||||||| ||||    
T  43150576 tcataattttctcaaagtttgttatatccaaaaaatatgtatttttagttaaaaacc 43150520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 121 - 177
Target Start/End: Complemental strand, 45487895 - 45487839
Alignment:
Q  121 tcatgattttctcaaagtttgttatatctaaataagatgtatttttagttaagaacc 177  Q
    |||| |||||||||| |||||||||||| ||| || |||||||||||||||||||||    
T  45487895 tcataattttctcaatgtttgttatatccaaaaaatatgtatttttagttaagaacc 45487839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 177
Target Start/End: Complemental strand, 10017205 - 10017154
Alignment:
Q  126 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaacc 177  Q
    ||||| ||||||||||||||||| ||| || |||||||||||||||||||||    
T  10017205 attttttcaaagtttgttatatccaaaaaatatgtatttttagttaagaacc 10017154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 101 - 136
Target Start/End: Complemental strand, 10254702 - 10254667
Alignment:
Q  101 atggttcttaactaaattcatcatgattttctcaaa 136  Q
    ||||||||||||||||||||||||||||||||||||    
T  10254702 atggttcttaactaaattcatcatgattttctcaaa 10254667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 177
Target Start/End: Original strand, 32237474 - 32237525
Alignment:
Q  126 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaacc 177  Q
    ||||||||||||||||||||||| ||| || ||||||||||| |||||||||    
T  32237474 attttctcaaagtttgttatatccaaaaaatatgtatttttaattaagaacc 32237525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 176
Target Start/End: Complemental strand, 46664272 - 46664217
Alignment:
Q  121 tcatgattttctcaaagtttgttatatctaaataagatgtatttttagttaagaac 176  Q
    |||| ||||||||||||||||||||||  ||| || ||||||||||||||||||||    
T  46664272 tcataattttctcaaagtttgttatattaaaaaaatatgtatttttagttaagaac 46664217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 126 - 176
Target Start/End: Original strand, 44920726 - 44920776
Alignment:
Q  126 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaac 176  Q
    ||||||||||||||| ||||||| ||| || ||||||||||||||||||||    
T  44920726 attttctcaaagtttattatatccaaaaaatatgtatttttagttaagaac 44920776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 177
Target Start/End: Original strand, 4072353 - 4072405
Alignment:
Q  126 attttctcaaagtttgttatat-ctaaataagatgtatttttagttaagaacc 177  Q
    |||||||||||||||||||||| | ||| || |||||||||||||||||||||    
T  4072353 attttctcaaagtttgttatatccaaaaaaatatgtatttttagttaagaacc 4072405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 177
Target Start/End: Complemental strand, 10117607 - 10117555
Alignment:
Q  126 attttctcaaagtttgttatat-ctaaataagatgtatttttagttaagaacc 177  Q
    |||||||||||||||||||||| | ||| || |||||||||||||||||||||    
T  10117607 attttctcaaagtttgttatatccaaaaaaatatgtatttttagttaagaacc 10117555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 177
Target Start/End: Complemental strand, 22101256 - 22101204
Alignment:
Q  126 attttctcaaagtttgttatatctaa-ataagatgtatttttagttaagaacc 177  Q
    ||||||||||||||||||||||| || | || |||||||||||||||||||||    
T  22101256 attttctcaaagtttgttatatccaacaaaatatgtatttttagttaagaacc 22101204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 177
Target Start/End: Complemental strand, 25446341 - 25446289
Alignment:
Q  126 attttctcaaagtttgttatat-ctaaataagatgtatttttagttaagaacc 177  Q
    |||||||||||||||||||||| | ||| || |||||||||||||||||||||    
T  25446341 attttctcaaagtttgttatatccaaaaaaatatgtatttttagttaagaacc 25446289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 177
Target Start/End: Original strand, 44611456 - 44611512
Alignment:
Q  121 tcatgattttctcaaagtttgttatatctaaataagatgtatttttagttaagaacc 177  Q
    |||| ||||||||||||||||||||||| ||| || || ||||||||||||| ||||    
T  44611456 tcataattttctcaaagtttgttatatcaaaaaaatatatatttttagttaaaaacc 44611512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 177
Target Start/End: Original strand, 55340373 - 55340425
Alignment:
Q  126 attttctcaaagtttgttatat-ctaaataagatgtatttttagttaagaacc 177  Q
    |||||||||||||||||||||| | ||| || |||||||||||||||||||||    
T  55340373 attttctcaaagtttgttatatccaaaaaaatatgtatttttagttaagaacc 55340425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 177
Target Start/End: Original strand, 1476635 - 1476682
Alignment:
Q  130 tctcaaagtttgttatatctaaataagatgtatttttagttaagaacc 177  Q
    |||||||||||||||| |||||| ||  ||||||||||||||||||||    
T  1476635 tctcaaagtttgttatctctaaaaaaattgtatttttagttaagaacc 1476682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 172
Target Start/End: Complemental strand, 4567277 - 4567227
Alignment:
Q  121 tcatgattttctcaaagtttgttatatctaaataagatgtatttttagttaa 172  Q
    ||||| ||||||||| |||||||||||||||| ||| |||||||||||||||    
T  4567277 tcatggttttctcaatgtttgttatatctaaa-aaggtgtatttttagttaa 4567227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 177
Target Start/End: Original strand, 38125259 - 38125310
Alignment:
Q  126 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaacc 177  Q
    ||||||| ||||||||||||||  ||| || |||||||||||||||||||||    
T  38125259 attttcttaaagtttgttatatacaaaaaatatgtatttttagttaagaacc 38125310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 177
Target Start/End: Original strand, 42105467 - 42105514
Alignment:
Q  130 tctcaaagtttgttatatctaaataagatgtatttttagttaagaacc 177  Q
    |||||||||||||||| |||||| ||  ||||||||||||||||||||    
T  42105467 tctcaaagtttgttatctctaaaaaaattgtatttttagttaagaacc 42105514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 177
Target Start/End: Original strand, 45712983 - 45713034
Alignment:
Q  126 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaacc 177  Q
    ||||| ||||||||||||||||| ||| || |||||||||||||| ||||||    
T  45712983 attttatcaaagtttgttatatccaaaaaatatgtatttttagtttagaacc 45713034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 136
Target Start/End: Original strand, 39677305 - 39677347
Alignment:
Q  94 tttttgcatggttcttaactaaattcatcatgattttctcaaa 136  Q
    |||||||||||||||||| ||||||||  ||||||||||||||    
T  39677305 tttttgcatggttcttaattaaattcactatgattttctcaaa 39677347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 177
Target Start/End: Complemental strand, 5529983 - 5529931
Alignment:
Q  126 attttctcaaagtttgttatatctaaataag-atgtatttttagttaagaacc 177  Q
    |||||||||||||||| |||||| ||| ||  |||||||||||||||||||||    
T  5529983 attttctcaaagtttgatatatccaaaaaaatatgtatttttagttaagaacc 5529931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 177
Target Start/End: Complemental strand, 8831832 - 8831780
Alignment:
Q  126 attttctcaaagtttgttatat-ctaaataagatgtatttttagttaagaacc 177  Q
    |||||||||||||||||||||| | ||| || |||||||||||||| ||||||    
T  8831832 attttctcaaagtttgttatatccaaaaaaatatgtatttttagtttagaacc 8831780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 177
Target Start/End: Complemental strand, 10254660 - 10254608
Alignment:
Q  126 attttctcaaagtttgttatatctaaataag-atgtatttttagttaagaacc 177  Q
    ||||| ||||||||||||||||| ||| ||  |||||||||||||||||||||    
T  10254660 attttttcaaagtttgttatatccaaaaaaatatgtatttttagttaagaacc 10254608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 172
Target Start/End: Original strand, 13724062 - 13724114
Alignment:
Q  121 tcatgattttctcaaagtttgttatat-ctaaataagatgtatttttagttaa 172  Q
    |||| |||||||||||||||||||||| | ||| || ||||||||||||||||    
T  13724062 tcataattttctcaaagtttgttatatccaaaaaaatatgtatttttagttaa 13724114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 177
Target Start/End: Complemental strand, 22176200 - 22176148
Alignment:
Q  126 attttctcaaagtttgttatatctaa-ataagatgtatttttagttaagaacc 177  Q
    ||||||||||||||||| ||||| || | || |||||||||||||||||||||    
T  22176200 attttctcaaagtttgtaatatccaacaaaatatgtatttttagttaagaacc 22176148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 121 - 177
Target Start/End: Complemental strand, 51159 - 51103
Alignment:
Q  121 tcatgattttctcaaagtttgttatatctaaataagatgtatttttagttaagaacc 177  Q
    |||| ||||||||||||||||||||||| ||| || || ||||||||||||||||||    
T  51159 tcataattttctcaaagtttgttatatccaaaaaatatatatttttagttaagaacc 51103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 173
Target Start/End: Complemental strand, 14533 - 14486
Alignment:
Q  126 attttctcaaagtttgttatatctaaataagatgtatttttagttaag 173  Q
    ||||||||||||| ||||||||| |||||| |||||||||||||||||    
T  14533 attttctcaaagtctgttatatccaaataatatgtatttttagttaag 14486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 105 - 147
Target Start/End: Original strand, 3644 - 3686
Alignment:
Q  105 ttcttaactaaattcatcatgattttctcaaagtttgttatat 147  Q
    |||||||||||||||||||| ||||||||| ||||||||||||    
T  3644 ttcttaactaaattcatcataattttctcatagtttgttatat 3686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0653 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0653
Description:

Target: scaffold0653; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 177
Target Start/End: Original strand, 3473 - 3524
Alignment:
Q  126 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaacc 177  Q
    ||||| ||||||||||||||||| ||| || ||||||||||| |||||||||    
T  3473 attttatcaaagtttgttatatccaaaaaatatgtatttttatttaagaacc 3524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 101 - 136
Target Start/End: Complemental strand, 7219 - 7184
Alignment:
Q  101 atggttcttaactaaattcatcatgattttctcaaa 136  Q
    ||||||||||||||||||||||||||||| ||||||    
T  7219 atggttcttaactaaattcatcatgatttcctcaaa 7184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 175
Target Start/End: Complemental strand, 7177 - 7128
Alignment:
Q  126 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaa 175  Q
    ||||||||||||||||||||||| |||  | || ||||||||||||||||    
T  7177 attttctcaaagtttgttatatccaaaatatatatatttttagttaagaa 7128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 177
Target Start/End: Complemental strand, 10206 - 10156
Alignment:
Q  126 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaacc 177  Q
    ||||||||||||||||||||||| ||| || || ||||||||||||||||||    
T  10206 attttctcaaagtttgttatatccaaa-aatatatatttttagttaagaacc 10156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 177
Target Start/End: Complemental strand, 48217 - 48166
Alignment:
Q  126 attttctcaaagtttgttatatctaaataagatgtatttttagttaagaacc 177  Q
    ||||||||||||||||||||||| ||| || ||||||||||| |||| ||||    
T  48217 attttctcaaagtttgttatatccaaaaaatatgtatttttaattaaaaacc 48166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 136
Target Start/End: Complemental strand, 48256 - 48224
Alignment:
Q  104 gttcttaactaaattcatcatgattttctcaaa 136  Q
    ||||||||||||||||| |||||||||||||||    
T  48256 gttcttaactaaattcaccatgattttctcaaa 48224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0163 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0163
Description:

Target: scaffold0163; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 136
Target Start/End: Original strand, 1970 - 2012
Alignment:
Q  94 tttttgcatggttcttaactaaattcatcatgattttctcaaa 136  Q
    |||||| |||||||||||||||||||| |||||||| ||||||    
T  1970 tttttgtatggttcttaactaaattcaccatgatttcctcaaa 2012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0163; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 177
Target Start/End: Original strand, 2019 - 2071
Alignment:
Q  126 attttctcaaagtttgttatatct-aaataagatgtatttttagttaagaacc 177  Q
    |||||| ||||||||||||||||| ||| || | |||||||||||||||||||    
T  2019 attttcacaaagtttgttatatctaaaaaaatacgtatttttagttaagaacc 2071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 147
Target Start/End: Original strand, 90729 - 90785
Alignment:
Q  91 tgatttttgcatggttcttaactaaattcatcatgattttctcaaagtttgttatat 147  Q
    ||||||||  |||||||||||||||||| | |||||||| || ||||||||| ||||    
T  90729 tgatttttttatggttcttaactaaatttaccatgatttccttaaagtttgtaatat 90785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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