View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3436-Insertion-10 (Length: 701)

Name: NF3436-Insertion-10
Description: NF3436
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3436-Insertion-10
NF3436-Insertion-10
[»] chr7 (4 HSPs)
chr7 (7-130)||(3929921-3930044)
chr7 (7-121)||(21317619-21317733)
chr7 (10-126)||(3928573-3928689)
chr7 (131-322)||(3929626-3929832)
[»] chr2 (5 HSPs)
chr2 (7-120)||(13576393-13576506)
chr2 (12-91)||(34562651-34562730)
chr2 (12-91)||(34571445-34571524)
chr2 (12-91)||(34578913-34578992)
chr2 (12-91)||(34584662-34584741)
[»] scaffold0197 (1 HSPs)
scaffold0197 (7-121)||(31056-31170)
[»] chr8 (8 HSPs)
chr8 (7-119)||(43479645-43479757)
chr8 (12-119)||(38807046-38807153)
chr8 (36-119)||(38799569-38799652)
chr8 (36-119)||(38821865-38821948)
chr8 (7-92)||(41943989-41944074)
chr8 (7-91)||(26592213-26592297)
chr8 (7-91)||(25865745-25865829)
chr8 (18-85)||(44344011-44344078)
[»] chr5 (8 HSPs)
chr5 (7-120)||(12531537-12531650)
chr5 (7-120)||(9866627-9866740)
chr5 (7-120)||(12546969-12547082)
chr5 (10-120)||(9894691-9894800)
chr5 (10-83)||(9870029-9870102)
chr5 (7-70)||(38735562-38735625)
chr5 (41-120)||(9903568-9903647)
chr5 (39-88)||(12538675-12538724)
[»] chr4 (2 HSPs)
chr4 (21-118)||(24860605-24860702)
chr4 (7-58)||(53290781-53290832)
[»] chr1 (1 HSPs)
chr1 (12-91)||(7594130-7594209)


Alignment Details
Target: chr7 (Bit Score: 108; Significance: 7e-54; HSPs: 4)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 7 - 130
Target Start/End: Complemental strand, 3930044 - 3929921
Alignment:
Q  7 atcttgttggtttgtttgaggatacgaatctttgtgctattcatgctaagagagttaccattatgcctaaggatattcaacttgcaagaagaatcagagg 106  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  3930044 atcttgttggtttgtttgaagatacgaatctttgtgccattcatgctaagagagttactattatgccgaaggatattcaacttgcaagaagaatcagagg 3929945  T
Q  107 cgaaagggcttagaagatttgatt 130  Q
    ||||||||||||||||||||||||    
T  3929944 cgaaagggcttagaagatttgatt 3929921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 7 - 121
Target Start/End: Original strand, 21317619 - 21317733
Alignment:
Q  7 atcttgttggtttgtttgaggatacgaatctttgtgctattcatgctaagagagttaccattatgcctaaggatattcaacttgcaagaagaatcagagg 106  Q
    ||||||||||||||||||| ||||| |||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||  | ||    
T  21317619 atcttgttggtttgtttgaagatacaaatctttgcgctattcatgctaagagagttactattatgcctaaggatattcaacttgcaagaagaattcgtgg 21317718  T
Q  107 cgaaagggcttagaa 121  Q
     ||||||||||||||    
T  21317719 tgaaagggcttagaa 21317733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 10 - 126
Target Start/End: Complemental strand, 3928689 - 3928573
Alignment:
Q  10 ttgttggtttgtttgaggatacgaatctttgtgctattcatgctaagagagttaccattatgcctaaggatattcaacttgcaagaagaatcagaggcga 109  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||||||||||| ||| |||||||||||||| |||||||| | ||||||||  ||||    
T  3928689 ttgttggtttgtttgaagatatgaatctttgtgctattcatgctaagagagttactattgtgcctaaggatattaaacttgcatgcagaatcaggtgcga 3928590  T
Q  110 aagggcttagaagattt 126  Q
     || |||||||||||||    
T  3928589 gagagcttagaagattt 3928573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 131 - 322
Target Start/End: Complemental strand, 3929832 - 3929626
Alignment:
Q  131 gaaaaagtgaatcttgaatgttgaattgatctgttaaatctatgatacttaatgtttcaaattgtttgcatttaa--------------tttcaatattg 216  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||||||||    |||||||| ||||||||||              ||||||| |||    
T  3929832 gaaaaagtgaatcttgaattttgaattgatctgttgaatctatgatacttaa----tcaaattgattgcatttaattgttcaaactaattttcaattttg 3929737  T
Q  217 tttatcttgatttgatgagaatgtga-aatag----tattttgttgcttttcaactttgaagttgggaaatttggcttcaattttaatatcgaaattggc 311  Q
    |||| ||||||||||||| |||  ||  ||||    || |||||||||||| | |||||| |||||||||||| |||||||||||||||| ||| ||| |    
T  3929736 tttaacttgatttgatgaaaattcgatcatagtaactaatttgttgctttttagctttgacgttgggaaattttgcttcaattttaatattgaagttgtc 3929637  T
Q  312 catggatatcg 322  Q
     ||||||||||    
T  3929636 tatggatatcg 3929626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 102; Significance: 3e-50; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 7 - 120
Target Start/End: Original strand, 13576393 - 13576506
Alignment:
Q  7 atcttgttggtttgtttgaggatacgaatctttgtgctattcatgctaagagagttaccattatgcctaaggatattcaacttgcaagaagaatcagagg 106  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| ||||||||||||||    
T  13576393 atcttgttggtttgtttgaggatacgaatctttgtgctattcatgctaagagggttactattatgcctaaggatattcaacttgcgagaagaatcagagg 13576492  T
Q  107 cgaaagggcttaga 120  Q
    ||||||||||||||    
T  13576493 cgaaagggcttaga 13576506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 12 - 91
Target Start/End: Complemental strand, 34562730 - 34562651
Alignment:
Q  12 gttggtttgtttgaggatacgaatctttgtgctattcatgctaagagagttaccattatgcctaaggatattcaacttgc 91  Q
    |||||||||||||||||||| ||| | ||||| |||||||||||||| ||||||||||||||||||||||||||||||||    
T  34562730 gttggtttgtttgaggataccaatttgtgtgcaattcatgctaagagggttaccattatgcctaaggatattcaacttgc 34562651  T

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Target: chr2; HSP #3
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 12 - 91
Target Start/End: Complemental strand, 34571524 - 34571445
Alignment:
Q  12 gttggtttgtttgaggatacgaatctttgtgctattcatgctaagagagttaccattatgcctaaggatattcaacttgc 91  Q
    |||||||||||||||||||| ||| | ||||| |||||||||||||| ||||||||||||||||||||||||||||||||    
T  34571524 gttggtttgtttgaggataccaatttgtgtgcaattcatgctaagagggttaccattatgcctaaggatattcaacttgc 34571445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 12 - 91
Target Start/End: Complemental strand, 34578992 - 34578913
Alignment:
Q  12 gttggtttgtttgaggatacgaatctttgtgctattcatgctaagagagttaccattatgcctaaggatattcaacttgc 91  Q
    |||||||||||||||||||| ||| | ||||| ||||||||||||||  | ||| |||||   |||||||||||||||||    
T  34578992 gttggtttgtttgaggataccaatttgtgtgcaattcatgctaagaggatcaccgttatggtgaaggatattcaacttgc 34578913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 12 - 91
Target Start/End: Complemental strand, 34584741 - 34584662
Alignment:
Q  12 gttggtttgtttgaggatacgaatctttgtgctattcatgctaagagagttaccattatgcctaaggatattcaacttgc 91  Q
    |||||||||||||||||||| ||| | ||||| ||||||||||||||  | ||| |||||   |||||||||||||||||    
T  34584741 gttggtttgtttgaggataccaatttgtgtgcaattcatgctaagaggatcaccgttatggtgaaggatattcaacttgc 34584662  T

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Target: scaffold0197 (Bit Score: 83; Significance: 6e-39; HSPs: 1)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 7 - 121
Target Start/End: Original strand, 31056 - 31170
Alignment:
Q  7 atcttgttggtttgtttgaggatacgaatctttgtgctattcatgctaagagagttaccattatgcctaaggatattcaacttgcaagaagaatcagagg 106  Q
    ||||||||||||||||||| ||||| |||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||  | ||    
T  31056 atcttgttggtttgtttgaagatacaaatctttgcgctattcatgctaagagagttactattatgcctaaggatattcaacttgcaagaagaattcgtgg 31155  T
Q  107 cgaaagggcttagaa 121  Q
     ||||||||||||||    
T  31156 tgaaagggcttagaa 31170  T

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Target: chr8 (Bit Score: 81; Significance: 9e-38; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 7 - 119
Target Start/End: Complemental strand, 43479757 - 43479645
Alignment:
Q  7 atcttgttggtttgtttgaggatacgaatctttgtgctattcatgctaagagagttaccattatgcctaaggatattcaacttgcaagaagaatcagagg 106  Q
    ||||||||||||||||||| ||||| || ||||| ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| |||||    
T  43479757 atcttgttggtttgtttgaagatactaacctttgcgctattcatgctaagagggttacaattatgcctaaggatattcaacttgcaagaagaattagagg 43479658  T
Q  107 cgaaagggcttag 119  Q
    ||| |||||||||    
T  43479657 cgagagggcttag 43479645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 12 - 119
Target Start/End: Original strand, 38807046 - 38807153
Alignment:
Q  12 gttggtttgtttgaggatacgaatctttgtgctattcatgctaagagagttaccattatgcctaaggatattcaacttgcaagaagaatcagaggcgaaa 111  Q
    |||||| | |||||||| || ||||  || || |||||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||||||| |    
T  38807046 gttggtctctttgaggacacaaatccgtgcgcaattcatgctaagagagttactatcatgcctaaggacattcaacttgcaagaagaatcagaggcgaga 38807145  T
Q  112 gggcttag 119  Q
    ||||||||    
T  38807146 gggcttag 38807153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 36 - 119
Target Start/End: Original strand, 38799569 - 38799652
Alignment:
Q  36 ctttgtgctattcatgctaagagagttaccattatgcctaaggatattcaacttgcaagaagaatcagaggcgaaagggcttag 119  Q
    |||||||| |||||||||||||||||||| || ||||||||||| ||||| |||||||||||||||||||| || |||||||||    
T  38799569 ctttgtgcaattcatgctaagagagttacaatcatgcctaaggacattcagcttgcaagaagaatcagaggagagagggcttag 38799652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 36 - 119
Target Start/End: Complemental strand, 38821948 - 38821865
Alignment:
Q  36 ctttgtgctattcatgctaagagagttaccattatgcctaaggatattcaacttgcaagaagaatcagaggcgaaagggcttag 119  Q
    |||||||| |||||||||||||||||||| || ||||||||||| ||||| |||||||||||||||||||| || |||||||||    
T  38821948 ctttgtgcaattcatgctaagagagttacaatcatgcctaaggacattcagcttgcaagaagaatcagaggagagagggcttag 38821865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 7 - 92
Target Start/End: Original strand, 41943989 - 41944074
Alignment:
Q  7 atcttgttggtttgtttgaggatacgaatctttgtgctattcatgctaagagagttaccattatgcctaaggatattcaacttgca 92  Q
    |||| ||||| |||||||||||||| ||| | ||||| |||||||||||||| ||||| |||||||| ||||| ||||||||||||    
T  41943989 atctggttggattgtttgaggataccaatttgtgtgcaattcatgctaagagggttacaattatgccaaaggacattcaacttgca 41944074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 7 - 91
Target Start/End: Original strand, 26592213 - 26592297
Alignment:
Q  7 atcttgttggtttgtttgaggatacgaatctttgtgctattcatgctaagagagttaccattatgcctaaggatattcaacttgc 91  Q
    |||||||||| |||||||||||||| || || || ||||||||||||||| | ||||| || ||||||||||||||||| |||||    
T  26592213 atcttgttggattgtttgaggatactaacctctgcgctattcatgctaagcgtgttactatcatgcctaaggatattcagcttgc 26592297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 7 - 91
Target Start/End: Original strand, 25865745 - 25865829
Alignment:
Q  7 atcttgttggtttgtttgaggatacgaatctttgtgctattcatgctaagagagttaccattatgcctaaggatattcaacttgc 91  Q
    ||||||| || |||||||||||||| ||| | ||||| |||||||||||||| || || |||||||| ||||||||||| |||||    
T  25865745 atcttgtgggattgtttgaggatactaatttgtgtgcaattcatgctaagagggtaacgattatgccaaaggatattcagcttgc 25865829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 44344011 - 44344078
Alignment:
Q  18 ttgtttgaggatacgaatctttgtgctattcatgctaagagagttaccattatgcctaaggatattca 85  Q
    |||||||||||||| ||| | |||||||||||||||||||| || || |||||||| |||||||||||    
T  44344011 ttgtttgaggataccaatttgtgtgctattcatgctaagagggtgacgattatgcccaaggatattca 44344078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 66; Significance: 8e-29; HSPs: 8)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 7 - 120
Target Start/End: Original strand, 12531537 - 12531650
Alignment:
Q  7 atcttgttggtttgtttgaggatacgaatctttgtgctattcatgctaagagagttaccattatgcctaaggatattcaacttgcaagaagaatcagagg 106  Q
    ||||||||||||||||||| ||||| ||||| ||||| |||||||||||||| ||||| || |||||||||||||||||||| ||  | |||||||||||    
T  12531537 atcttgttggtttgtttgaagatactaatctctgtgccattcatgctaagagggttactatcatgcctaaggatattcaactcgctcgcagaatcagagg 12531636  T
Q  107 cgaaagggcttaga 120  Q
    ||| ||||||||||    
T  12531637 cgagagggcttaga 12531650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 7 - 120
Target Start/End: Complemental strand, 9866740 - 9866627
Alignment:
Q  7 atcttgttggtttgtttgaggatacgaatctttgtgctattcatgctaagagagttaccattatgcctaaggatattcaacttgcaagaagaatcagagg 106  Q
    ||||||||||||||||||| ||||| || ||||||||||||||||||||||||||||| ||||||||| |||| || ||||| ||   ||||||||||||    
T  9866740 atcttgttggtttgtttgaagatactaacctttgtgctattcatgctaagagagttactattatgcctgaggacatccaactcgcttaaagaatcagagg 9866641  T
Q  107 cgaaagggcttaga 120  Q
    | | ||||||||||    
T  9866640 ccagagggcttaga 9866627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 7 - 120
Target Start/End: Complemental strand, 12547082 - 12546969
Alignment:
Q  7 atcttgttggtttgtttgaggatacgaatctttgtgctattcatgctaagagagttaccattatgcctaaggatattcaacttgcaagaagaatcagagg 106  Q
    ||||||||||||||||||| ||||| ||||| ||||| |||||||||||||| ||||| || |||||||||||||||||||||||  | ||||| |||||    
T  12547082 atcttgttggtttgtttgaagatactaatctctgtgccattcatgctaagagggttactatcatgcctaaggatattcaacttgctcgcagaattagagg 12546983  T
Q  107 cgaaagggcttaga 120  Q
    ||| || |||||||    
T  12546982 cgagagagcttaga 12546969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 10 - 120
Target Start/End: Original strand, 9894691 - 9894800
Alignment:
Q  10 ttgttggtttgtttgaggatacgaatctttgtgctattcatgctaagagagttaccattatgcctaaggatattcaacttgcaagaagaatcagaggcga 109  Q
    ||||| |||||||||| ||||| ||| |||| ||||||||||||||| ||||||| |||||| | ||||||||| |||||||  | ||||||||||||||    
T  9894691 ttgttagtttgtttgaagatactaatatttgcgctattcatgctaagtgagttactattatggc-aaggatattgaacttgctcgcagaatcagaggcga 9894789  T
Q  110 aagggcttaga 120  Q
     ||||||||||    
T  9894790 gagggcttaga 9894800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 10 - 83
Target Start/End: Original strand, 9870029 - 9870102
Alignment:
Q  10 ttgttggtttgtttgaggatacgaatctttgtgctattcatgctaagagagttaccattatgcctaaggatatt 83  Q
    |||||||||||||| | ||||  |||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  9870029 ttgttggtttgttttaagatattaatctttgcgctattcatgctaagagagttactattatgcctaaggatatt 9870102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 7 - 70
Target Start/End: Original strand, 38735562 - 38735625
Alignment:
Q  7 atcttgttggtttgtttgaggatacgaatctttgtgctattcatgctaagagagttaccattat 70  Q
    ||||||||||||||||||| ||||| || |||||| |||||||||||||||| ||||| |||||    
T  38735562 atcttgttggtttgtttgaagatactaacctttgtactattcatgctaagagggttacaattat 38735625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 41 - 120
Target Start/End: Original strand, 9903568 - 9903647
Alignment:
Q  41 tgctattcatgctaagagagttaccattatgcctaaggatattcaacttgcaagaagaatcagaggcgaaagggcttaga 120  Q
    ||||||| ||||||| || ||||| ||||| |||||||||||||||||||| | |||||||  |||||| |||| |||||    
T  9903568 tgctatttatgctaaaagcgttactattatacctaaggatattcaacttgccaaaagaatcgcaggcgagagggtttaga 9903647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 88
Target Start/End: Original strand, 12538675 - 12538724
Alignment:
Q  39 tgtgctattcatgctaagagagttaccattatgcctaaggatattcaact 88  Q
    |||||||||||||||||||||||||| || |||||||| | |||||||||    
T  12538675 tgtgctattcatgctaagagagttactatcatgcctaaaggtattcaact 12538724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 62; Significance: 2e-26; HSPs: 2)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 21 - 118
Target Start/End: Original strand, 24860605 - 24860702
Alignment:
Q  21 tttgaggatacgaatctttgtgctattcatgctaagagagttaccattatgcctaaggatattcaacttgcaagaagaatcagaggcgaaagggctta 118  Q
    ||||| ||||| |||||||| |||||||||||||||||||||||||||||||| |||||||||||||| ||  | |||||||||||||| ||||||||    
T  24860605 tttgaagatacaaatctttgcgctattcatgctaagagagttaccattatgcccaaggatattcaactcgctcgcagaatcagaggcgagagggctta 24860702  T

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Target: chr4; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 58
Target Start/End: Original strand, 53290781 - 53290832
Alignment:
Q  7 atcttgttggtttgtttgaggatacgaatctttgtgctattcatgctaagag 58  Q
    ||||||||||||||||||| ||||| || |||||| | ||||||||||||||    
T  53290781 atcttgttggtttgtttgaagatactaacctttgtaccattcatgctaagag 53290832  T

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Target: chr1 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 12 - 91
Target Start/End: Complemental strand, 7594209 - 7594130
Alignment:
Q  12 gttggtttgtttgaggatacgaatctttgtgctattcatgctaagagagttaccattatgcctaaggatattcaacttgc 91  Q
    ||||| ||||||||||| || ||||| ||||| |||||||||||||| || || |||||||| ||||||||||| |||||    
T  7594209 gttggattgtttgaggacaccaatctgtgtgcaattcatgctaagagggtgacaattatgccaaaggatattcagcttgc 7594130  T

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