View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3436-Insertion-2 (Length: 1111)

Name: NF3436-Insertion-2
Description: NF3436
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3436-Insertion-2
NF3436-Insertion-2
[»] scaffold0187 (5 HSPs)
scaffold0187 (8-560)||(16032-16582)
scaffold0187 (8-560)||(26360-26910)
scaffold0187 (630-758)||(15863-15991)
scaffold0187 (630-758)||(26191-26319)
scaffold0187 (248-311)||(5988-6049)
[»] chr4 (45 HSPs)
chr4 (760-978)||(31495684-31495902)
chr4 (760-946)||(13992694-13992879)
chr4 (768-977)||(7122274-7122481)
chr4 (760-977)||(28467977-28468194)
chr4 (773-946)||(24742393-24742565)
chr4 (768-954)||(7124496-7124681)
chr4 (760-956)||(8392982-8393176)
chr4 (759-977)||(5135648-5135864)
chr4 (760-977)||(5137875-5138090)
chr4 (773-943)||(51520869-51521038)
chr4 (760-956)||(8395191-8395385)
chr4 (773-946)||(5733062-5733235)
chr4 (773-946)||(56141523-56141696)
chr4 (773-942)||(9223911-9224079)
chr4 (758-884)||(31985125-31985251)
chr4 (773-942)||(9228698-9228866)
chr4 (823-965)||(29761055-29761196)
chr4 (773-946)||(3814422-3814593)
chr4 (773-946)||(18856125-18856297)
chr4 (801-942)||(18712295-18712435)
chr4 (773-946)||(45347329-45347501)
chr4 (759-914)||(5148148-5148303)
chr4 (773-836)||(18860446-18860509)
chr4 (759-815)||(29761185-29761240)
chr4 (773-922)||(16628358-16628506)
chr4 (760-820)||(5143807-5143867)
chr4 (773-821)||(8689049-8689097)
chr4 (869-917)||(8689078-8689126)
chr4 (824-946)||(45356861-45356982)
chr4 (857-919)||(3778014-3778076)
chr4 (773-815)||(3778118-3778160)
chr4 (773-815)||(38151923-38151965)
chr4 (773-906)||(6742901-6743034)
chr4 (857-906)||(54882496-54882545)
chr4 (870-906)||(5370521-5370557)
chr4 (773-812)||(5268704-5268743)
chr4 (860-915)||(5268772-5268827)
chr4 (860-915)||(10047834-10047889)
chr4 (773-815)||(10047935-10047977)
chr4 (777-815)||(16622783-16622821)
chr4 (860-906)||(52095806-52095852)
chr4 (857-906)||(2209176-2209225)
chr4 (857-906)||(5429354-5429403)
chr4 (857-906)||(26176069-26176118)
chr4 (861-906)||(26363725-26363770)
[»] chr5 (57 HSPs)
chr5 (760-977)||(18442016-18442233)
chr5 (760-966)||(9789604-9789809)
chr5 (760-977)||(29719965-29720183)
chr5 (760-977)||(26177466-26177683)
chr5 (760-940)||(29722152-29722332)
chr5 (757-977)||(24136269-24136487)
chr5 (760-977)||(26170357-26170574)
chr5 (759-956)||(22536658-22536853)
chr5 (760-977)||(16407641-16407858)
chr5 (760-977)||(16409077-16409294)
chr5 (759-977)||(40379677-40379892)
chr5 (768-977)||(25077713-25077920)
chr5 (768-977)||(25135682-25135889)
chr5 (760-885)||(29752265-29752390)
chr5 (760-887)||(29751597-29751724)
chr5 (760-977)||(16546216-16546430)
chr5 (760-977)||(40381889-40382103)
chr5 (760-953)||(10592844-10593034)
chr5 (773-946)||(30631764-30631936)
chr5 (760-977)||(16543994-16544208)
chr5 (773-946)||(27450225-27450397)
chr5 (773-946)||(27445382-27445554)
chr5 (760-926)||(9352807-9352973)
chr5 (773-946)||(43599133-43599306)
chr5 (773-946)||(43604625-43604798)
chr5 (773-946)||(43610117-43610290)
chr5 (773-942)||(1456650-1456818)
chr5 (760-884)||(15465001-15465125)
chr5 (773-925)||(29402562-29402714)
chr5 (760-884)||(36931843-36931967)
chr5 (773-946)||(15045096-15045267)
chr5 (843-948)||(38219843-38219947)
chr5 (823-946)||(43592688-43592811)
chr5 (773-946)||(28807088-28807260)
chr5 (823-946)||(31180665-31180787)
chr5 (756-945)||(37556121-37556308)
chr5 (767-945)||(37560953-37561130)
chr5 (760-810)||(35388196-35388246)
chr5 (890-959)||(35388101-35388169)
chr5 (760-946)||(2785778-2785963)
chr5 (760-946)||(33768587-33768772)
chr5 (760-946)||(33791719-33791904)
chr5 (773-815)||(31180776-31180818)
chr5 (773-815)||(43592800-43592842)
chr5 (758-815)||(14520799-14520856)
chr5 (890-946)||(29751560-29751615)
chr5 (857-915)||(11916541-11916599)
chr5 (857-906)||(42428863-42428912)
chr5 (837-884)||(35388154-35388201)
chr5 (758-835)||(31396487-31396564)
chr5 (857-906)||(213018-213067)
chr5 (768-813)||(11916452-11916497)
chr5 (857-906)||(42426680-42426729)
chr5 (868-905)||(43592635-43592671)
chr5 (868-905)||(43599080-43599116)
chr5 (868-905)||(43604572-43604608)
chr5 (868-905)||(43610064-43610100)
[»] chr3 (74 HSPs)
chr3 (760-977)||(800685-800902)
chr3 (757-956)||(6716082-6716279)
chr3 (760-956)||(54634710-54634904)
chr3 (760-977)||(23198313-23198530)
chr3 (760-948)||(23200542-23200729)
chr3 (760-977)||(1306387-1306604)
chr3 (759-977)||(25637012-25637227)
chr3 (773-946)||(40372268-40372440)
chr3 (759-926)||(26928079-26928246)
chr3 (760-926)||(33386137-33386303)
chr3 (773-946)||(8477818-8477990)
chr3 (760-977)||(4598892-4599107)
chr3 (760-977)||(4601113-4601328)
chr3 (768-977)||(10055812-10056020)
chr3 (768-977)||(10066922-10067130)
chr3 (760-977)||(3617034-3617248)
chr3 (768-977)||(10058034-10058242)
chr3 (768-977)||(10060256-10060464)
chr3 (768-977)||(10062478-10062686)
chr3 (768-977)||(10064700-10064908)
chr3 (760-926)||(27453415-27453581)
chr3 (757-926)||(37726133-37726302)
chr3 (753-977)||(10208771-10208993)
chr3 (773-946)||(22172674-22172846)
chr3 (773-977)||(7167668-7167870)
chr3 (760-884)||(7782588-7782712)
chr3 (823-956)||(6718331-6718463)
chr3 (760-977)||(10210978-10211193)
chr3 (773-946)||(18656844-18657017)
chr3 (760-926)||(37408036-37408201)
chr3 (777-977)||(27352097-27352295)
chr3 (773-942)||(28501164-28501332)
chr3 (773-942)||(28503331-28503499)
chr3 (807-946)||(2671111-2671249)
chr3 (823-956)||(45282628-45282760)
chr3 (823-926)||(27986001-27986104)
chr3 (823-926)||(32143781-32143884)
chr3 (823-976)||(8738585-8738736)
chr3 (823-976)||(9090823-9090974)
chr3 (890-977)||(7782516-7782603)
chr3 (767-946)||(2672425-2672603)
chr3 (823-923)||(27974477-27974577)
chr3 (759-815)||(45282584-45282639)
chr3 (760-815)||(6718288-6718342)
chr3 (773-917)||(27027174-27027318)
chr3 (760-815)||(32143873-32143928)
chr3 (770-915)||(40734084-40734228)
chr3 (770-917)||(40735015-40735161)
chr3 (767-946)||(2676581-2676759)
chr3 (760-820)||(27974433-27974493)
chr3 (758-915)||(27038511-27038668)
chr3 (773-917)||(36029561-36029704)
chr3 (773-917)||(21711669-21711813)
chr3 (869-946)||(32475887-32475963)
chr3 (869-946)||(32480745-32480821)
chr3 (760-815)||(27985957-27986012)
chr3 (760-815)||(40845224-40845279)
chr3 (773-815)||(16264899-16264941)
chr3 (773-815)||(30709271-30709313)
chr3 (869-946)||(8512643-8512719)
chr3 (869-946)||(8517523-8517599)
chr3 (869-946)||(24968520-24968596)
chr3 (857-906)||(29812737-29812786)
chr3 (870-906)||(3393293-3393329)
chr3 (870-906)||(5258590-5258626)
chr3 (857-917)||(8370048-8370108)
chr3 (857-913)||(16264820-16264876)
chr3 (760-815)||(39032017-39032072)
chr3 (773-811)||(1730921-1730959)
chr3 (773-835)||(32475997-32476059)
chr3 (773-835)||(32480855-32480917)
chr3 (857-906)||(6096263-6096312)
chr3 (860-917)||(39032117-39032174)
chr3 (857-906)||(44331892-44331941)
[»] chr1 (38 HSPs)
chr1 (760-977)||(40281958-40282176)
chr1 (760-946)||(20622636-20622821)
chr1 (760-977)||(9986785-9987002)
chr1 (760-977)||(21053540-21053757)
chr1 (759-946)||(51764989-51765175)
chr1 (760-977)||(19360912-19361129)
chr1 (760-956)||(9036003-9036197)
chr1 (760-948)||(19365768-19365955)
chr1 (756-977)||(44203214-44203432)
chr1 (760-884)||(24202251-24202375)
chr1 (760-926)||(13604095-13604261)
chr1 (768-946)||(41391002-41391178)
chr1 (823-946)||(24793709-24793831)
chr1 (773-946)||(39445898-39446070)
chr1 (773-946)||(44023389-44023561)
chr1 (773-946)||(1054526-1054698)
chr1 (773-946)||(25439411-25439583)
chr1 (841-946)||(24786905-24787009)
chr1 (773-946)||(25444604-25444776)
chr1 (777-915)||(26644390-26644528)
chr1 (823-946)||(41398657-41398778)
chr1 (660-734)||(37888542-37888616)
chr1 (757-837)||(21536109-21536189)
chr1 (773-815)||(24793678-24793720)
chr1 (857-906)||(28220672-28220721)
chr1 (857-906)||(28223867-28223916)
chr1 (908-959)||(24202378-24202428)
chr1 (768-815)||(41398767-41398814)
chr1 (773-815)||(13598970-13599012)
chr1 (753-815)||(37070337-37070399)
chr1 (857-906)||(3156541-3156590)
chr1 (857-906)||(31658912-31658961)
chr1 (244-293)||(37882626-37882675)
chr1 (759-815)||(3282276-3282332)
chr1 (870-906)||(20762358-20762394)
chr1 (870-915)||(37070237-37070282)
chr1 (869-946)||(43988057-43988133)
chr1 (857-906)||(49918023-49918072)
[»] chr2 (33 HSPs)
chr2 (760-977)||(6266274-6266491)
chr2 (758-977)||(4484706-4484925)
chr2 (758-977)||(25410049-25410268)
chr2 (760-977)||(32289148-32289365)
chr2 (759-977)||(12647753-12647968)
chr2 (760-977)||(30832921-30833138)
chr2 (756-977)||(3492160-3492381)
chr2 (773-977)||(9295874-9296076)
chr2 (760-926)||(40739291-40739457)
chr2 (773-946)||(11098399-11098571)
chr2 (773-946)||(14291941-14292113)
chr2 (755-942)||(39811472-39811657)
chr2 (773-838)||(44310483-44310548)
chr2 (823-926)||(28258713-28258816)
chr2 (773-837)||(32247276-32247340)
chr2 (758-820)||(28258667-28258729)
chr2 (860-917)||(34389318-34389375)
chr2 (857-917)||(33528193-33528253)
chr2 (773-815)||(8389636-8389678)
chr2 (774-946)||(19349683-19349854)
chr2 (857-906)||(2837289-2837338)
chr2 (760-946)||(19344825-19345010)
chr2 (773-813)||(33528110-33528150)
chr2 (773-812)||(20522794-20522833)
chr2 (759-814)||(33118696-33118751)
chr2 (773-820)||(36757430-36757477)
chr2 (860-915)||(39483346-39483401)
chr2 (773-815)||(10706738-10706780)
chr2 (773-815)||(21630514-21630556)
chr2 (860-906)||(29867556-29867602)
chr2 (773-815)||(39483446-39483488)
chr2 (872-917)||(8389732-8389777)
chr2 (860-917)||(10706825-10706882)
[»] chr7 (46 HSPs)
chr7 (760-977)||(43504504-43504721)
chr7 (760-946)||(24789426-24789611)
chr7 (760-977)||(39730933-39731150)
chr7 (760-956)||(20343500-20343694)
chr7 (756-948)||(48408394-48408585)
chr7 (760-959)||(21646445-21646643)
chr7 (760-977)||(18409182-18409399)
chr7 (760-977)||(18414058-18414275)
chr7 (758-977)||(32060674-32060890)
chr7 (760-977)||(6592707-6592921)
chr7 (773-977)||(21640209-21640411)
chr7 (759-977)||(6594923-6595138)
chr7 (760-977)||(18392566-18392780)
chr7 (773-946)||(2058421-2058592)
chr7 (759-926)||(25767380-25767541)
chr7 (773-946)||(20357040-20357212)
chr7 (760-926)||(47264101-47264267)
chr7 (804-945)||(1532947-1533087)
chr7 (773-942)||(12406677-12406845)
chr7 (759-977)||(1562373-1562588)
chr7 (760-926)||(2479794-2479960)
chr7 (773-942)||(4873541-4873709)
chr7 (773-946)||(24023831-24024003)
chr7 (767-946)||(21811745-21811923)
chr7 (760-834)||(1532884-1532958)
chr7 (859-977)||(18389130-18389246)
chr7 (773-925)||(31109082-31109235)
chr7 (760-915)||(21983712-21983867)
chr7 (773-863)||(12397390-12397480)
chr7 (759-876)||(44847618-44847735)
chr7 (758-915)||(21989377-21989533)
chr7 (869-946)||(24260929-24261005)
chr7 (760-815)||(18390508-18390562)
chr7 (773-946)||(16880476-16880648)
chr7 (773-946)||(16885331-16885503)
chr7 (861-906)||(4538996-4539041)
chr7 (869-946)||(24265785-24265861)
chr7 (857-906)||(47674388-47674437)
chr7 (857-906)||(47676581-47676630)
chr7 (870-906)||(4178461-4178497)
chr7 (773-815)||(79958-80000)
chr7 (860-906)||(23554716-23554762)
chr7 (773-835)||(24260833-24260895)
chr7 (857-906)||(4796239-4796288)
chr7 (857-906)||(6360575-6360624)
chr7 (857-906)||(48599941-48599990)
[»] chr6 (47 HSPs)
chr6 (759-978)||(411684-411904)
chr6 (760-946)||(3073158-3073343)
chr6 (760-956)||(27647467-27647662)
chr6 (758-956)||(16578907-16579103)
chr6 (758-956)||(16616277-16616473)
chr6 (760-948)||(22709458-22709645)
chr6 (759-977)||(5674228-5674444)
chr6 (760-956)||(16554454-16554648)
chr6 (760-956)||(16631010-16631204)
chr6 (755-977)||(2171887-2172109)
chr6 (759-978)||(6136332-6136548)
chr6 (760-976)||(25420797-25421010)
chr6 (773-925)||(30125030-30125182)
chr6 (768-977)||(13150856-13151064)
chr6 (768-977)||(34166673-34166881)
chr6 (760-977)||(33342473-33342688)
chr6 (759-884)||(6097862-6097987)
chr6 (759-977)||(34164443-34164659)
chr6 (773-925)||(11857403-11857555)
chr6 (760-977)||(6026834-6027048)
chr6 (760-884)||(26253589-26253713)
chr6 (773-942)||(14741938-14742106)
chr6 (773-942)||(22010201-22010369)
chr6 (823-977)||(5266458-5266610)
chr6 (760-926)||(23896791-23896957)
chr6 (823-956)||(16652759-16652891)
chr6 (773-946)||(6438899-6439071)
chr6 (758-926)||(5756949-5757117)
chr6 (868-976)||(25420999-25421104)
chr6 (890-977)||(6097790-6097877)
chr6 (759-864)||(34151827-34151931)
chr6 (823-942)||(14737128-14737246)
chr6 (760-815)||(16652716-16652770)
chr6 (760-946)||(16839146-16839331)
chr6 (760-946)||(33329932-33330117)
chr6 (773-815)||(5266599-5266641)
chr6 (773-815)||(14737097-14737139)
chr6 (773-917)||(31085958-31086101)
chr6 (869-946)||(5343880-5343956)
chr6 (857-946)||(28155167-28155255)
chr6 (760-946)||(33335429-33335614)
chr6 (773-914)||(5016981-5017121)
chr6 (773-835)||(5343990-5344052)
chr6 (758-946)||(6005822-6006009)
chr6 (773-815)||(28155102-28155144)
chr6 (861-906)||(3809369-3809414)
chr6 (861-906)||(9183455-9183500)
[»] scaffold0491 (2 HSPs)
scaffold0491 (760-977)||(9092-9308)
scaffold0491 (759-977)||(11537-11754)
[»] chr8 (39 HSPs)
chr8 (760-966)||(2627318-2627523)
chr8 (760-956)||(3439088-3439281)
chr8 (760-946)||(1261414-1261599)
chr8 (759-948)||(26288330-26288518)
chr8 (759-948)||(26301587-26301775)
chr8 (759-948)||(26313581-26313769)
chr8 (773-977)||(4759546-4759748)
chr8 (773-977)||(33037299-33037501)
chr8 (773-946)||(30656098-30656270)
chr8 (773-946)||(10683751-10683923)
chr8 (773-946)||(36979830-36980002)
chr8 (760-884)||(31042908-31043032)
chr8 (760-977)||(15290143-15290358)
chr8 (760-977)||(15470512-15470727)
chr8 (760-977)||(42575694-42575909)
chr8 (773-946)||(18852639-18852811)
chr8 (773-925)||(6311771-6311923)
chr8 (773-946)||(18870033-18870205)
chr8 (760-926)||(7412786-7412952)
chr8 (773-942)||(7289439-7289608)
chr8 (823-955)||(25689604-25689734)
chr8 (773-942)||(25327676-25327844)
chr8 (773-946)||(39784337-39784509)
chr8 (823-925)||(10688661-10688763)
chr8 (759-815)||(25689560-25689615)
chr8 (773-815)||(10688630-10688672)
chr8 (760-946)||(35745794-35745979)
chr8 (773-815)||(5701964-5702006)
chr8 (857-906)||(15212460-15212509)
chr8 (870-906)||(1746664-1746700)
chr8 (857-917)||(5702049-5702109)
chr8 (870-906)||(34256950-34256986)
chr8 (823-906)||(43036062-43036146)
chr8 (768-815)||(4456578-4456625)
chr8 (868-906)||(6311696-6311734)
chr8 (868-906)||(10688800-10688838)
chr8 (860-906)||(22975993-22976039)
chr8 (857-906)||(30143016-30143065)
chr8 (857-906)||(42435654-42435703)
[»] scaffold0188 (1 HSPs)
scaffold0188 (759-948)||(17430-17618)
[»] scaffold0565 (1 HSPs)
scaffold0565 (760-977)||(2971-3185)
[»] scaffold0674 (1 HSPs)
scaffold0674 (760-978)||(4095-4310)
[»] scaffold0286 (1 HSPs)
scaffold0286 (755-977)||(21934-22156)
[»] scaffold0137 (1 HSPs)
scaffold0137 (760-977)||(5859-6074)
[»] scaffold1519 (1 HSPs)
scaffold1519 (801-948)||(523-669)
[»] scaffold0140 (1 HSPs)
scaffold0140 (760-884)||(7911-8035)
[»] scaffold0006 (3 HSPs)
scaffold0006 (760-926)||(132752-132918)
scaffold0006 (773-815)||(6255-6297)
scaffold0006 (773-815)||(3063-3105)
[»] scaffold0355 (1 HSPs)
scaffold0355 (773-942)||(3349-3517)
[»] scaffold0510 (1 HSPs)
scaffold0510 (760-926)||(1083-1249)
[»] scaffold0135 (1 HSPs)
scaffold0135 (773-942)||(34566-34734)
[»] scaffold0087 (2 HSPs)
scaffold0087 (758-926)||(43432-43600)
scaffold0087 (759-820)||(36323-36384)
[»] scaffold0464 (1 HSPs)
scaffold0464 (773-946)||(761-933)
[»] scaffold1455 (1 HSPs)
scaffold1455 (773-836)||(1721-1784)
[»] scaffold0665 (2 HSPs)
scaffold0665 (823-942)||(8112-8230)
scaffold0665 (773-815)||(8219-8261)
[»] scaffold0098 (2 HSPs)
scaffold0098 (823-926)||(45657-45760)
scaffold0098 (758-813)||(45751-45806)
[»] scaffold0259 (1 HSPs)
scaffold0259 (869-946)||(1847-1923)
[»] scaffold0197 (2 HSPs)
scaffold0197 (869-946)||(13892-13968)
scaffold0197 (869-946)||(18772-18848)
[»] scaffold0028 (1 HSPs)
scaffold0028 (869-946)||(148552-148628)
[»] scaffold0009 (1 HSPs)
scaffold0009 (869-946)||(176558-176634)
[»] scaffold0002 (1 HSPs)
scaffold0002 (870-906)||(434218-434254)
[»] scaffold0176 (1 HSPs)
scaffold0176 (857-906)||(17709-17758)
[»] scaffold0066 (1 HSPs)
scaffold0066 (857-906)||(20860-20909)


Alignment Details
Target: scaffold0187 (Bit Score: 452; Significance: 0; HSPs: 5)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 452; E-Value: 0
Query Start/End: Original strand, 8 - 560
Target Start/End: Complemental strand, 16582 - 16032
Alignment:
Q  8 gatgttgtaattaatgtgtatattgtagtcattgcagtgtgaaattttatatctgctattccctccaaactctcaagtttccctttttgcaaactgacta 107  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16582 gatgttgtaattaatgtgtatattgtagtctttgcagtgtgaaattttatatctgctattccctccaaactctcaagtttccctttttgcaaactgacta 16483  T
Q  108 tctcttgatattcacccattaaaattttctttaatctatgaaataaaaaatatatggttatcaaaacacgatttatacaagactacgaagc-ttgttgca 206  Q
    ||||||||||||||| ||||||||||| ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  16482 tctcttgatattcactcattaaaatttcctttaatctatgaataaaaaaatatatggttatcaaaacacgatttatacaagactacgaagctttgttgca 16383  T
Q  207 acataacgatttgttgtgtgtcattggctcgccgaactgcggatttttcagtaattttgaaaaacaatgtaattgcaaatattgctgcgcaacaattcaa 306  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  16382 acataaccatttgttgtgtgtcattggctcgccgaactgcggatttttcagtaattttgaaaaacaatgtaattgcaaatattgct--gcaacaattcaa 16285  T
Q  307 gagtgcttagattagattgggtttcttccaacttagctttatagttctacccaaattgaacgattacactatgcagttgagcattacaggatacttgttt 406  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  16284 gagtgcatagattagattgggtttcttccaacttagctttatagttctacccaaattgaacgattacactatgcagttgagcgttacaggatatttgttt 16185  T
Q  407 gacccaaaaattnnnnnnnnnntgatacaacaacaaacattgtagcaaacatcacatgttgcaatacaaaattttaagcgaacaatgttgacatgcgagt 506  Q
    ||||||||||||          |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  16184 gacccaaaaatt-ttaaaaaattgatacaacaacaaacattgtagcaaacatcatatgttgcaatacaaaattttaagctaacaatgttgacatgcgagt 16086  T
Q  507 agtaaatttttaggtacaatacaaaaaatagtcgagttatttatctgaaaggat 560  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  16085 agtaaatttttaggtgcaatacaaaaaatagtcgagttatttatctgaaaggat 16032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #2
Raw Score: 452; E-Value: 0
Query Start/End: Original strand, 8 - 560
Target Start/End: Complemental strand, 26910 - 26360
Alignment:
Q  8 gatgttgtaattaatgtgtatattgtagtcattgcagtgtgaaattttatatctgctattccctccaaactctcaagtttccctttttgcaaactgacta 107  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26910 gatgttgtaattaatgtgtatattgtagtctttgcagtgtgaaattttatatctgctattccctccaaactctcaagtttccctttttgcaaactgacta 26811  T
Q  108 tctcttgatattcacccattaaaattttctttaatctatgaaataaaaaatatatggttatcaaaacacgatttatacaagactacgaagc-ttgttgca 206  Q
    ||||||||||||||| ||||||||||| ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  26810 tctcttgatattcactcattaaaatttcctttaatctatgaataaaaaaatatatggttatcaaaacacgatttatacaagactacgaagctttgttgca 26711  T
Q  207 acataacgatttgttgtgtgtcattggctcgccgaactgcggatttttcagtaattttgaaaaacaatgtaattgcaaatattgctgcgcaacaattcaa 306  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  26710 acataaccatttgttgtgtgtcattggctcgccgaactgcggatttttcagtaattttgaaaaacaatgtaattgcaaatattgct--gcaacaattcaa 26613  T
Q  307 gagtgcttagattagattgggtttcttccaacttagctttatagttctacccaaattgaacgattacactatgcagttgagcattacaggatacttgttt 406  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  26612 gagtgcatagattagattgggtttcttccaacttagctttatagttctacccaaattgaacgattacactatgcagttgagcgttacaggatatttgttt 26513  T
Q  407 gacccaaaaattnnnnnnnnnntgatacaacaacaaacattgtagcaaacatcacatgttgcaatacaaaattttaagcgaacaatgttgacatgcgagt 506  Q
    ||||||||||||          |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  26512 gacccaaaaatt-ttaaaaaattgatacaacaacaaacattgtagcaaacatcatatgttgcaatacaaaattttaagctaacaatgttgacatgcgagt 26414  T
Q  507 agtaaatttttaggtacaatacaaaaaatagtcgagttatttatctgaaaggat 560  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  26413 agtaaatttttaggtgcaatacaaaaaatagtcgagttatttatctgaaaggat 26360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #3
Raw Score: 121; E-Value: 2e-61
Query Start/End: Original strand, 630 - 758
Target Start/End: Complemental strand, 15991 - 15863
Alignment:
Q  630 tcacccaaatggggtaagtcgtggctggcacctttccccgttcccttctctttatcttcactcctttgcatattctttaaaaatcagtatttttcaatac 729  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  15991 tcacccaaatggggtaagtcgtgactggcacctttccccgttcccttctccttatcttcactcctttgcatattctttaaaaatcagtatttttcaatac 15892  T
Q  730 aagaaactaagtacttattatgtttcttt 758  Q
    |||||||||||||||||||||||||||||    
T  15891 aagaaactaagtacttattatgtttcttt 15863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #4
Raw Score: 121; E-Value: 2e-61
Query Start/End: Original strand, 630 - 758
Target Start/End: Complemental strand, 26319 - 26191
Alignment:
Q  630 tcacccaaatggggtaagtcgtggctggcacctttccccgttcccttctctttatcttcactcctttgcatattctttaaaaatcagtatttttcaatac 729  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  26319 tcacccaaatggggtaagtcgtgactggcacctttccccgttcccttctccttatcttcactcctttgcatattctttaaaaatcagtatttttcaatac 26220  T
Q  730 aagaaactaagtacttattatgtttcttt 758  Q
    |||||||||||||||||||||||||||||    
T  26219 aagaaactaagtacttattatgtttcttt 26191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #5
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 248 - 311
Target Start/End: Complemental strand, 6049 - 5988
Alignment:
Q  248 gatttttcagtaattttgaaaaacaatgtaattgcaaatattgctgcgcaacaattcaagagtg 311  Q
    |||||||||||||||||||||| || |||||||||||||| ||||  |||||||| ||||||||    
T  6049 gatttttcagtaattttgaaaaccagtgtaattgcaaatagtgct--gcaacaatccaagagtg 5988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 184; Significance: 5e-99; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 184; E-Value: 5e-99
Query Start/End: Original strand, 760 - 978
Target Start/End: Complemental strand, 31495902 - 31495684
Alignment:
Q  760 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggttg 859  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | |||    
T  31495902 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagctggtttg 31495803  T
Q  860 cagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtcgtttcttgggacg 959  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||    
T  31495802 cagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagtt-tccatgataaggactggtcgtttcttgggacg 31495704  T
Q  960 gacgca-caatcgtgacaca 978  Q
     ||||| |||||||||||||    
T  31495703 aacgcaccaatcgtgacaca 31495684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 139; E-Value: 4e-72
Query Start/End: Original strand, 760 - 946
Target Start/End: Complemental strand, 13992879 - 13992694
Alignment:
Q  760 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggttg 859  Q
    |||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || |||||||| | |||    
T  13992879 tgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgtcgtgagctggtttg 13992780  T
Q  860 cagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtc 946  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| | | |||||||||||||||    
T  13992779 cagggtgccaaatcgtgacacgattttgggaaatcgtgacacgattttcaaacttgctcgttaagtt-ttcatgataaggactggtc 13992694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 127; E-Value: 5e-65
Query Start/End: Original strand, 768 - 977
Target Start/End: Original strand, 7122274 - 7122481
Alignment:
Q  768 tttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagcta-ggttgcagggtg 866  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||||| | |||||||||||| ||||||||||      
T  7122274 tttgtcttcaaatttgtggtgtggaagaacagggaaatcgtgacacgattttgggatcgtgacacgatttcg-gatgccgtgagctagggttgcaggggt 7122372  T
Q  867 ccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtcgtttcttgggacggacgcac 966  Q
     ||||||||| |||||||||||||||||||||||||||    |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||     
T  7122373 gcaaatcgtggcacgattgtgggaaatcgtgacacgatccagaaacttgctcgttaag-tatccttgataaggactggtcgttccttgggacggacgca- 7122470  T
Q  967 aatcgtgacac 977  Q
    |||||||||||    
T  7122471 aatcgtgacac 7122481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 127; E-Value: 5e-65
Query Start/End: Original strand, 760 - 977
Target Start/End: Original strand, 28467977 - 28468194
Alignment:
Q  760 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggttg 859  Q
    |||||||||||| ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| ||||||||| ||| ||||||||||| | |||    
T  28467977 tgttgagatttggcttcaaatttgtggtatggaagaacagagaaatcgtgacacgaatttggcatcgtaacacgattttgtgatgccgtgagctggtttg 28468076  T
Q  860 cagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtcgtttcttgggacg 959  Q
    ||||||||||||||||||||||||  ||| ||||||||||||||||| ||||||||||||||||||| ||  |||||||||||||||||  |||| ||||    
T  28468077 cagggtgccaaatcgtgacacgatcttggaaaatcgtgacacgattttcaaacttgctcgttaagtt-tctatgataaggactggtcgtaccttgtgacg 28468175  T
Q  960 gacgcac-aatcgtgacac 977  Q
     ||| || |||||||||||    
T  28468176 tacgtacaaatcgtgacac 28468194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 118; E-Value: 1e-59
Query Start/End: Original strand, 773 - 946
Target Start/End: Complemental strand, 24742565 - 24742393
Alignment:
Q  773 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggttgcagggtgccaaat 872  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||  |||||||    
T  24742565 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagctagtttgcaggacgccaaat 24742466  T
Q  873 cgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtc 946  Q
    |||| ||||||  ||||||||||||||||||||   |||||||||||||||| |||||||||||||||||||||    
T  24742465 cgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaag-tatccttgataaggactggtc 24742393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 112; E-Value: 5e-56
Query Start/End: Original strand, 768 - 954
Target Start/End: Original strand, 7124496 - 7124681
Alignment:
Q  768 tttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagcta-ggttgcagggtg 866  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||||| | |||||||||||| ||||||||||      
T  7124496 tttgtcttcaaatttgtggtgtggaagaacagggaaatcgtgacacgattttgggatcgtgacacgatttcg-gatgccgtgagctagggttgcaggggt 7124594  T
Q  867 ccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtcgtttcttg 954  Q
     ||||||||| |||||||||||||||||||||||||||    |||||||||||||||| |||||||||||||||||||||||| ||||    
T  7124595 gcaaatcgtggcacgattgtgggaaatcgtgacacgatccagaaacttgctcgttaag-tatccttgataaggactggtcgttccttg 7124681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 102; E-Value: 4e-50
Query Start/End: Original strand, 760 - 956
Target Start/End: Original strand, 8392982 - 8393176
Alignment:
Q  760 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagcta-ggtt 858  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| | |||||||||||| ||||    
T  8392982 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcg-gatgccgtgagctagggtt 8393079  T
Q  859 gcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtcgtttcttggg 956  Q
    ||||||   ||||||||| |||||||  || |||||||||||||||    |||||||||||||||| ||||| ||||||||||||||| |||||||||    
T  8393080 gcaggggtgcaaatcgtggcacgatttgggaaaatcgtgacacgatccagaaacttgctcgttaag-tatccgtgataaggactggtcttttcttggg 8393176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 101; E-Value: 2e-49
Query Start/End: Original strand, 759 - 977
Target Start/End: Original strand, 5135648 - 5135864
Alignment:
Q  759 ttgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagcta-ggt 857  Q
    ||||||||||| ||||||||||||||||  ||||||||||||||||||||||||||| ||||| |||||||| |||||||| | ||||||||| || |||    
T  5135648 ttgttgagatt-gtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttcg-gatgccgtgagttagggt 5135745  T
Q  858 tgcagggtgccaaatcgtgacacgattgtggg-aaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtcgtttcttggg 956  Q
    |||||||   ||||||||| ||||||| |||| |||||||||||||||    |||||||||||||||| |||||||||||||||| ||||||| ||||||    
T  5135746 tgcaggggtgcaaatcgtgtcacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaag-tatccttgataaggaccggtcgttccttggg 5135844  T
Q  957 acggacgcacaatcgtgacac 977  Q
    ||||||||| |||||||||||    
T  5135845 acggacgca-aatcgtgacac 5135864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 100; E-Value: 7e-49
Query Start/End: Original strand, 760 - 977
Target Start/End: Original strand, 5137875 - 5138090
Alignment:
Q  760 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagcta-ggtt 858  Q
    |||||||||| ||||||||||||||||  ||||||||||||||||||||||||||| ||||| |||||||| |||||||| | ||||||||| || ||||    
T  5137875 tgttgagatt-gtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttcg-gatgccgtgagttagggtt 5137972  T
Q  859 gcagggtgccaaatcgtgacacgattgtggg-aaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtcgtttcttggga 957  Q
    ||||||   ||||||||| ||||||| |||| |||||||||||||||    |||||||||||||||| |||||||||||||||| ||||||| |||||||    
T  5137973 gcaggggtgcaaatcgtgtcacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaag-tatccttgataaggaccggtcgttccttggga 5138071  T
Q  958 cggacgcacaatcgtgacac 977  Q
    |||||||| |||||||||||    
T  5138072 cggacgca-aatcgtgacac 5138090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 99; E-Value: 3e-48
Query Start/End: Original strand, 773 - 943
Target Start/End: Complemental strand, 51521038 - 51520869
Alignment:
Q  773 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggttgcagggtgccaaat 872  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||  || |||||||||||| |||||||  |||||||    
T  51521038 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggggccgtgagctagtttgcaggacgccaaat 51520939  T
Q  873 cgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactg 943  Q
    |||| ||||||  ||||||||| ||||||||||   |||||||||||||||| ||||| ||||||||||||    
T  51520938 cgtggcacgatcttgggaaatcatgacacgattcagaaacttgctcgttaag-tatccctgataaggactg 51520869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 98; E-Value: 1e-47
Query Start/End: Original strand, 760 - 956
Target Start/End: Original strand, 8395191 - 8395385
Alignment:
Q  760 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagcta-ggtt 858  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| | |||||||||||| ||||    
T  8395191 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcg-gatgccgtgagctagggtt 8395288  T
Q  859 gcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtcgtttcttggg 956  Q
    ||||||   ||||||||  |||||||  || |||||||||||| ||    |||||||||||||||| ||||| |||||||||||||||||||||||||    
T  8395289 gcaggggtgcaaatcgtagcacgatttgggaaaatcgtgacacaatccagaaacttgctcgttaag-tatccgtgataaggactggtcgtttcttggg 8395385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 95; E-Value: 7e-46
Query Start/End: Original strand, 773 - 946
Target Start/End: Complemental strand, 5733235 - 5733062
Alignment:
Q  773 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtg-agctaggttgcagggtgccaaa 871  Q
    |||||||||||||||||| |||||||| |||||| |||||||| ||||||||||||||||||||||||||||||||| ||| || |||||||  ||||||    
T  5733235 cttcaaatttgtggtctgaaagaacagagaaatcatgacacgattttggcatcgtgacacgatttcgtggtgccgtgaagcaagtttgcaggacgccaaa 5733136  T
Q  872 tcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtc 946  Q
    ||||||||||||  ||||||||||||||||||||   ||||||||| |||||| ||||  |||||||||||||||    
T  5733135 tcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaag-tatcactgataaggactggtc 5733062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 95; E-Value: 7e-46
Query Start/End: Original strand, 773 - 946
Target Start/End: Original strand, 56141523 - 56141696
Alignment:
Q  773 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggttgcagggtgcc-aaa 871  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| | || | |||||||||| |||||||  ||| |||    
T  56141523 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttggaggggtcgtgagctagtttgcaggacgccaaaa 56141622  T
Q  872 tcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtc 946  Q
    ||||| ||||||  ||||||||||||||||||||   |||||||||||||||| ||||| |||||||||||||||    
T  56141623 tcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaag-tatccctgataaggactggtc 56141696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 94; E-Value: 3e-45
Query Start/End: Original strand, 773 - 942
Target Start/End: Original strand, 9223911 - 9224079
Alignment:
Q  773 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggttgcagggtgccaaat 872  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||  |  |||||||||||| |||||||  |||||||    
T  9223911 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagtggccgtgagctagtttgcaggacgccaaat 9224010  T
Q  873 cgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggact 942  Q
    |||| ||||||  ||||||||||||||||||||   |||||||||||||||| ||||  |||||||||||    
T  9224011 cgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaag-tatcactgataaggact 9224079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 91; E-Value: 2e-43
Query Start/End: Original strand, 758 - 884
Target Start/End: Original strand, 31985125 - 31985251
Alignment:
Q  758 tttgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggt 857  Q
    |||||||||||||| ||||||||||||| |||| |||||||| ||||||||||||||||||||||||||||||||||||| ||| | ||||||||||| |    
T  31985125 tttgttgagatttggcttcaaatttgtgatctgaaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgataccgtgagctagtt 31985224  T
Q  858 tgcagggtgccaaatcgtgacacgatt 884  Q
     ||||||||||||||||||||||||||    
T  31985225 agcagggtgccaaatcgtgacacgatt 31985251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 90; E-Value: 6e-43
Query Start/End: Original strand, 773 - 942
Target Start/End: Original strand, 9228698 - 9228866
Alignment:
Q  773 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggttgcagggtgccaaat 872  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||  |  |||||||||| | |||||||  |||||||    
T  9228698 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagtggccgtgagctcgtttgcaggacgccaaat 9228797  T
Q  873 cgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggact 942  Q
    |||| ||||||  ||||||||||||||||||||   |||||||||||||||| ||||  |||||||||||    
T  9228798 cgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaag-tatcactgataaggact 9228866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 823 - 965
Target Start/End: Complemental strand, 29761196 - 29761055
Alignment:
Q  823 atcgtgacacgatttcgtggtgccgtgagctaggttgcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgtta 922  Q
    ||||||||||||||||| ||||||||||||||| |||||||  ||||||||||| ||||||  ||||||||||||||||||||   ||||||||||||||    
T  29761196 atcgtgacacgatttcgaggtgccgtgagctagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgtta 29761097  T
Q  923 agttatccttgataaggactggtcgtttcttgggacggacgca 965  Q
    || ||||||||||||||||||||| |  ||||| |||||||||    
T  29761096 ag-tatccttgataaggactggtcataccttggtacggacgca 29761055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 78; E-Value: 9e-36
Query Start/End: Original strand, 773 - 946
Target Start/End: Complemental strand, 3814593 - 3814422
Alignment:
Q  773 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggttgcagggtgccaaat 872  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||  |   |||| ||| || ||||| |  |||||||    
T  3814593 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagtgaccgtaagcaagtttgcaagacgccaaat 3814494  T
Q  873 cgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtc 946  Q
    |||| ||||||| ||||||||||||||||||||   ||||||||| |||||| ||||  |||||||||||||||    
T  3814493 cgtgtcacgatt-tgggaaatcgtgacacgattcagaaacttgctggttaag-tatcactgataaggactggtc 3814422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 773 - 946
Target Start/End: Complemental strand, 18856297 - 18856125
Alignment:
Q  773 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgag-ctaggttgcagggtgccaaa 871  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||| |||||||||||| || | ||||||||||| | || |||| || ||| |||    
T  18856297 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacacga-ttggaggtgccgtgagccaagtttgctggatgcaaaa 18856199  T
Q  872 tcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtc 946  Q
    ||||| || |||  ||||||||||||||||||||   ||||||||| |||||| ||||  |||||||||||||||    
T  18856198 tcgtggcaagatcttgggaaatcgtgacacgattcagaaacttgctggttaag-tatcactgataaggactggtc 18856125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 801 - 942
Target Start/End: Original strand, 18712295 - 18712435
Alignment:
Q  801 gaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggttgcagggtgccaaatcgtgacacgattgtgggaaatcgtgaca 900  Q
    ||||||||||||||| ||||||||||||||||||||||  |  |||||||||||| |||||||  ||||||||||| ||||||  |||||||||||||||    
T  18712295 gaaatcgtgacacgattttggcatcgtgacacgatttcaagtggccgtgagctagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgaca 18712394  T
Q  901 cgatttgcaaacttgctcgttaagttatccttgataaggact 942  Q
    |||||   |||||||||||||||| ||||  |||||||||||    
T  18712395 cgattcagaaacttgctcgttaag-tatcactgataaggact 18712435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 773 - 946
Target Start/End: Original strand, 45347329 - 45347501
Alignment:
Q  773 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgag-ctaggttgcagggtgccaaa 871  Q
    ||||||||||||||||||||||||||  ||||||||||||||| ||||| |||||||||||| || | | ||||||||| | || |||| || ||| |||    
T  45347329 cttcaaatttgtggtctggaagaacaaagaaatcgtgacacgattttggaatcgtgacacga-ttagagatgccgtgagccaagtttgctggatgcaaaa 45347427  T
Q  872 tcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtc 946  Q
    ||||| ||||||  ||||||||||||||||||||   ||||||||| |||||| ||||  |||||||||||||||    
T  45347428 tcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaag-tatcactgataaggactggtc 45347501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 759 - 914
Target Start/End: Complemental strand, 5148303 - 5148148
Alignment:
Q  759 ttgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggtt 858  Q
    ||||||| | ||| ||||||||||||||| |||||||| || ||||||||||||||| |||  || ||||||||||||| |   || |||||||||| ||    
T  5148303 ttgttgaaaattggcttcaaatttgtggtttggaagaatagagaaatcgtgacacgattttatcaccgtgacacgattttgcaatgtcgtgagctagttt 5148204  T
Q  859 gcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaactt 914  Q
    |||||||| | ||||||| ||||||| || |||| | ||||||||||| |||||||    
T  5148203 gcagggtgaccaatcgtggcacgattttgtgaaaacttgacacgattttcaaactt 5148148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 773 - 836
Target Start/End: Complemental strand, 18860509 - 18860446
Alignment:
Q  773 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatt 836  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||    
T  18860509 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacacgatt 18860446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 759 - 815
Target Start/End: Complemental strand, 29761240 - 29761185
Alignment:
Q  759 ttgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacga 815  Q
    ||||||| ||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  29761240 ttgttgatatttg-cttcaaatttgtggtctggaagaacagagaaatcgtgacacga 29761185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 773 - 922
Target Start/End: Original strand, 16628358 - 16628506
Alignment:
Q  773 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggtt-gcagggtgccaaa 871  Q
    ||||||||||||||| ||||||||||| ||||||||||||||| ||   ||  ||| ||||||||   ||  | ||||||  | || |||||||||  ||    
T  16628358 cttcaaatttgtggtttggaagaacagagaaatcgtgacacgatttcatcaatgtgtcacgattttcagg--cagtgagcatgctttgcagggtgctcaa 16628455  T
Q  872 tcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgtta 922  Q
    ||||| ||||||| ||||||| ||||||||||||| |||||||||| ||||    
T  16628456 tcgtgtcacgattttgggaaaacgtgacacgattttcaaacttgcttgtta 16628506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 760 - 820
Target Start/End: Complemental strand, 5143867 - 5143807
Alignment:
Q  760 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttg 820  Q
    |||||| | ||| ||||||||||||||| ||||||||||| ||||||||||||||| ||||    
T  5143867 tgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttg 5143807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 773 - 821
Target Start/End: Original strand, 8689049 - 8689097
Alignment:
Q  773 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttgg 821  Q
    ||||||||||||||| ||||||||||| ||||||||||||||| |||||    
T  8689049 cttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttgg 8689097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 869 - 917
Target Start/End: Original strand, 8689078 - 8689126
Alignment:
Q  869 aaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgct 917  Q
    |||||||||||||||| ||||||| ||||||||||||| ||||||||||    
T  8689078 aaatcgtgacacgattttgggaaaacgtgacacgattttcaaacttgct 8689126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 824 - 946
Target Start/End: Original strand, 45356861 - 45356982
Alignment:
Q  824 tcgtgacacgatttcgtggtgccgtgagctaggtt-gcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgtta 922  Q
    |||||||||||||| | | |||||||||| | ||| || || ||| |||||||| ||||||  ||||||||||||||||||||   ||||||||| ||||    
T  45356861 tcgtgacacgattt-gagatgccgtgagccaagtttgctggatgcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggtta 45356959  T
Q  923 agttatccttgataaggactggtc 946  Q
    || ||||  |||||||||||||||    
T  45356960 ag-tatcactgataaggactggtc 45356982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 857 - 919
Target Start/End: Complemental strand, 3778076 - 3778014
Alignment:
Q  857 ttgcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcg 919  Q
    |||||||||||  ||||||| ||||||| ||||||| ||||||||||||| |||| |||||||    
T  3778076 ttgcagggtgctcaatcgtgtcacgattttgggaaaacgtgacacgattttcaaatttgctcg 3778014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 773 - 815
Target Start/End: Complemental strand, 3778160 - 3778118
Alignment:
Q  773 cttcaaatttgtggtctggaagaacagggaaatcgtgacacga 815  Q
    ||||||||||||||| ||||||||||| |||||||||||||||    
T  3778160 cttcaaatttgtggtttggaagaacagagaaatcgtgacacga 3778118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 773 - 815
Target Start/End: Original strand, 38151923 - 38151965
Alignment:
Q  773 cttcaaatttgtggtctggaagaacagggaaatcgtgacacga 815  Q
    ||||||||||||||| ||||||||||| |||||||||||||||    
T  38151923 cttcaaatttgtggtttggaagaacagagaaatcgtgacacga 38151965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 773 - 906
Target Start/End: Original strand, 6742901 - 6743034
Alignment:
Q  773 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggttgcagggtgccaaat 872  Q
    |||||||||| |||| ||||||||||| ||||||||||||||| ||   || |||| |||||||| |    | || |||||   || ||||||||| |||    
T  6742901 cttcaaatttatggtttggaagaacagagaaatcgtgacacgatttcatcaacgtgtcacgattttgcaacgtcgagagctgtttttcagggtgcctaat 6743000  T
Q  873 cgtgacacgattgtgggaaatcgtgacacgattt 906  Q
    |||| |||| || ||||||| |||||||||||||    
T  6743001 cgtggcacgtttttgggaaaacgtgacacgattt 6743034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 857 - 906
Target Start/End: Original strand, 54882496 - 54882545
Alignment:
Q  857 ttgcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgattt 906  Q
    |||||||||| | ||||||||||||||| ||||||| |||||||||||||    
T  54882496 ttgcagggtgtccaatcgtgacacgattttgggaaaacgtgacacgattt 54882545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 870 - 906
Target Start/End: Complemental strand, 5370557 - 5370521
Alignment:
Q  870 aatcgtgacacgattgtgggaaatcgtgacacgattt 906  Q
    ||||||||||||||| |||||||||||||||||||||    
T  5370557 aatcgtgacacgattttgggaaatcgtgacacgattt 5370521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 773 - 812
Target Start/End: Original strand, 5268704 - 5268743
Alignment:
Q  773 cttcaaatttgtggtctggaagaacagggaaatcgtgaca 812  Q
    ||||||||||||||| ||||||||||| ||||||||||||    
T  5268704 cttcaaatttgtggtttggaagaacagagaaatcgtgaca 5268743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 860 - 915
Target Start/End: Original strand, 5268772 - 5268827
Alignment:
Q  860 cagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttg 915  Q
    ||||||||  ||||||| ||||||| ||||||| ||||||||||||| ||||||||    
T  5268772 cagggtgctcaatcgtgtcacgattttgggaaaacgtgacacgattttcaaacttg 5268827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 860 - 915
Target Start/End: Complemental strand, 10047889 - 10047834
Alignment:
Q  860 cagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttg 915  Q
    ||||||||  || |||| ||||||| ||||||| ||||||||||||||||||||||    
T  10047889 cagggtgctcaaccgtgtcacgattttgggaaaacgtgacacgatttgcaaacttg 10047834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 773 - 815
Target Start/End: Complemental strand, 10047977 - 10047935
Alignment:
Q  773 cttcaaatttgtggtctggaagaacagggaaatcgtgacacga 815  Q
    ||||||||||||||| |||||||||||  ||||||||||||||    
T  10047977 cttcaaatttgtggtttggaagaacagataaatcgtgacacga 10047935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 777 - 815
Target Start/End: Original strand, 16622783 - 16622821
Alignment:
Q  777 aaatttgtggtctggaagaacagggaaatcgtgacacga 815  Q
    ||||||||||| ||||||||||| |||||||||||||||    
T  16622783 aaatttgtggtttggaagaacagagaaatcgtgacacga 16622821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 860 - 906
Target Start/End: Complemental strand, 52095852 - 52095806
Alignment:
Q  860 cagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgattt 906  Q
    ||||||| | ||||||||||||||| ||||||| |||||||||||||    
T  52095852 cagggtgtccaatcgtgacacgattttgggaaaacgtgacacgattt 52095806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 857 - 906
Target Start/End: Original strand, 2209176 - 2209225
Alignment:
Q  857 ttgcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgattt 906  Q
    |||||| ||||| ||||||||||||||| |||| || |||||||||||||    
T  2209176 ttgcagagtgcccaatcgtgacacgattttggggaaacgtgacacgattt 2209225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 857 - 906
Target Start/End: Original strand, 5429354 - 5429403
Alignment:
Q  857 ttgcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgattt 906  Q
    |||||||||| | ||||||||||||||| ||||||| ||||| |||||||    
T  5429354 ttgcagggtgtctaatcgtgacacgattttgggaaaacgtgatacgattt 5429403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 857 - 906
Target Start/End: Complemental strand, 26176118 - 26176069
Alignment:
Q  857 ttgcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgattt 906  Q
    |||||||||||| || |||||||| ||| ||||||| |||||||||||||    
T  26176118 ttgcagggtgcccaaccgtgacacaattttgggaaaacgtgacacgattt 26176069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 861 - 906
Target Start/End: Original strand, 26363725 - 26363770
Alignment:
Q  861 agggtgccaaatcgtgacacgattgtgggaaatcgtgacacgattt 906  Q
    |||||| | ||||||||||||||| ||||||| |||||||||||||    
T  26363725 agggtgtccaatcgtgacacgattttgggaaaacgtgacacgattt 26363770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 179; Significance: 5e-96; HSPs: 57)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 179; E-Value: 5e-96
Query Start/End: Original strand, 760 - 977
Target Start/End: Complemental strand, 18442233 - 18442016
Alignment:
Q  760 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggttg 859  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| | |||    
T  18442233 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcatgatgccgtgagctggtttg 18442134  T
Q  860 cagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtcgtttcttgggacg 959  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||    
T  18442133 cagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagtt-tccatgataaggactggtcgtttcttgggacg 18442035  T
Q  960 gacgca-caatcgtgacac 977  Q
     ||||| ||||||||||||    
T  18442034 aacgcaccaatcgtgacac 18442016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 171; E-Value: 3e-91
Query Start/End: Original strand, 760 - 966
Target Start/End: Complemental strand, 9789809 - 9789604
Alignment:
Q  760 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggttg 859  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | |||    
T  9789809 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagctggtttg 9789710  T
Q  860 cagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtcgtttcttgggacg 959  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||||| ||||    
T  9789709 cagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgaaaacttgctcgttaagtt-tccatgataaggactggtcgtttcttgcgacg 9789611  T
Q  960 gacgcac 966  Q
     ||||||    
T  9789610 aacgcac 9789604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 168; E-Value: 2e-89
Query Start/End: Original strand, 760 - 977
Target Start/End: Original strand, 29719965 - 29720183
Alignment:
Q  760 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggttg 859  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||    
T  29719965 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctagtctg 29720064  T
Q  860 cagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatt-tgcaaacttgctcgttaagttatccttgataaggactggtcgtttcttgggac 958  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| ||||||||||||||| |  ||||||||    
T  29720065 cagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgattgtgcaaacttgctcgttaagtt-tccatgataaggactggtcataccttgggac 29720163  T
Q  959 ggacgca-caatcgtgacac 977  Q
    ||| ||| ||||||||||||    
T  29720164 ggatgcaccaatcgtgacac 29720183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 167; E-Value: 7e-89
Query Start/End: Original strand, 760 - 977
Target Start/End: Original strand, 26177466 - 26177683
Alignment:
Q  760 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggttg 859  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | |||    
T  26177466 tgttgagatttggcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagctggtttg 26177565  T
Q  860 cagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtcgtttcttgggacg 959  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||  |||||||||    
T  26177566 cagggtgccaaatcgtgacacgatcatgggaaatcgtgacacgatttgcaaacttgctcgttaagtt-tccatgataaggactggtcgtaccttgggacg 26177664  T
Q  960 gacgca-caatcgtgacac 977  Q
    |||||| ||||||||||||    
T  26177665 gacgcaccaatcgtgacac 26177683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 146; E-Value: 2e-76
Query Start/End: Original strand, 760 - 940
Target Start/End: Original strand, 29722152 - 29722332
Alignment:
Q  760 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggttg 859  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||  ||    
T  29722152 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgctgtgagctagtctg 29722251  T
Q  860 cagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatt-tgcaaacttgctcgttaagttatccttgataagga 940  Q
    || ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| |||||||||    
T  29722252 catggtgccaaatcgtgacacgattgtgggaaatcgtgacacgattgtgcaaacttgctcgttaagtt-tccatgataagga 29722332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 145; E-Value: 9e-76
Query Start/End: Original strand, 757 - 977
Target Start/End: Complemental strand, 24136487 - 24136269
Alignment:
Q  757 ttttgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctagg 856  Q
    ||||||||| |||||  |||||||||||||||||||||||||  |||||||||||||||||||||||||||||||| |||||||| |||||||||||||     
T  24136487 ttttgttgatatttggtttcaaatttgtggtctggaagaacacagaaatcgtgacacgaatttggcatcgtgacacaatttcgtgatgccgtgagctagt 24136388  T
Q  857 ttgcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtcgtttcttggg 956  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| |  ||||||    
T  24136387 ttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacgattttcaaacttgctcgttaag-tatccttgataaggactggtcataccttggg 24136289  T
Q  957 acggacgcacaatcgtgacac 977  Q
    ||| ||||| |||||||||||    
T  24136288 acgtacgca-aatcgtgacac 24136269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 143; E-Value: 1e-74
Query Start/End: Original strand, 760 - 977
Target Start/End: Original strand, 26170357 - 26170574
Alignment:
Q  760 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggttg 859  Q
    ||||||| |||| |||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||||||||| ||| ||||||||||| | |||    
T  26170357 tgttgagttttggcttcaaatttatggtatggaagaacagggaaatcgtgacacgaatttggtatcgtgacacgattttgtgatgccgtgagctggtttg 26170456  T
Q  860 cagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtcgtttcttgggacg 959  Q
    |||||||||||||||||||||||| ||||||||||||||||  |||||||||||||||||||||||| ||| |||||||||||||||||  |||||||||    
T  26170457 cagggtgccaaatcgtgacacgatcgtgggaaatcgtgacataatttgcaaacttgctcgttaagtt-tccatgataaggactggtcgtaccttgggacg 26170555  T
Q  960 gacgca-caatcgtgacac 977  Q
    |||||| ||||||||||||    
T  26170556 gacgcaccaatcgtgacac 26170574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 142; E-Value: 6e-74
Query Start/End: Original strand, 759 - 956
Target Start/End: Complemental strand, 22536853 - 22536658
Alignment:
Q  759 ttgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggtt 858  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| ||||||||||||||||||    
T  22536853 ttgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggcatcgtgacacgatttcggggtgccgtgagctaggtt 22536755  T
Q  859 gcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtcgtttcttggg 956  Q
    ||||||||| |||||||| ||| |||||||||||||||||||||||    |||||||||||||||| |||||||||||||||||||||||||||||||    
T  22536754 gcagggtgcaaaatcgtggcacaattgtgggaaatcgtgacacgatcgtgaaacttgctcgttaag-tatccttgataaggactggtcgtttcttggg 22536658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 135; E-Value: 9e-70
Query Start/End: Original strand, 760 - 977
Target Start/End: Original strand, 16407641 - 16407858
Alignment:
Q  760 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggttg 859  Q
    |||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||| ||| ||||||||||| | |||    
T  16407641 tgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttgacatcgtgacacgattttgtgatgccgtgagctggtttg 16407740  T
Q  860 cagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtcgtttcttgggacg 959  Q
    ||||||||||||||||||||||||  || | |||||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||  |||||||||    
T  16407741 cagggtgccaaatcgtgacacgatcttgaggaatcgtgacacgatttgcaaacttgctcgttaagtt-tccatgataaggaccggtcgtaccttgggacg 16407839  T
Q  960 gacgc-acaatcgtgacac 977  Q
     ||||  ||||||||||||    
T  16407840 tacgctccaatcgtgacac 16407858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 123; E-Value: 1e-62
Query Start/End: Original strand, 760 - 977
Target Start/End: Original strand, 16409077 - 16409294
Alignment:
Q  760 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggttg 859  Q
    |||||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| ||| || |||||||| | |||    
T  16409077 tgttgagatttggcttcaaatttgtggtctgaaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgatgtcgtgagctggtttg 16409176  T
Q  860 cagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtcgtttcttgggacg 959  Q
    || |||||||||| ||||||||||  || | |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||   ||||||||    
T  16409177 caaggtgccaaattgtgacacgatcttgaggaatcgtgacacgatttgcaaacttgctcgttaagtt-tccatgataaggactggtcgtacattgggacg 16409275  T
Q  960 gacgc-acaatcgtgacac 977  Q
     ||||  ||||||||||||    
T  16409276 tacgctccaatcgtgacac 16409294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 120; E-Value: 8e-61
Query Start/End: Original strand, 759 - 977
Target Start/End: Original strand, 40379677 - 40379892
Alignment:
Q  759 ttgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagcta-ggt 857  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||| ||||| |||||||||||| || | |||||||||||||| |||    
T  40379677 ttgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgccacgattttggaatcgtgacacga-ttggaggtgccgtgagctagggt 40379774  T
Q  858 tgcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtcgtttcttggga 957  Q
    |||||||||| || |||||||||||||  || |||||||||||||||    |||||||||||||||| |||||||||||||||||||||||| |||||||    
T  40379775 tgcagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaag-tatccttgataaggactggtcgttccttggga 40379873  T
Q  958 cggacgcacaatcgtgacac 977  Q
    |||||||| |||||||||||    
T  40379874 cggacgca-aatcgtgacac 40379892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 119; E-Value: 3e-60
Query Start/End: Original strand, 768 - 977
Target Start/End: Original strand, 25077713 - 25077920
Alignment:
Q  768 tttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagcta-ggttgcagggtg 866  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| ||| || | |||||||||||||| ||||| ||||      
T  25077713 tttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttgggatcgtgacgcga-ttggaggtgccgtgagctagggttgtaggggt 25077811  T
Q  867 ccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtcgtttcttgggacggacgcac 966  Q
     ||||||||| |||||||||||||||||||||||||||    |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||     
T  25077812 gcaaatcgtgtcacgattgtgggaaatcgtgacacgatccagaaacttgctcgttaag-tatccttgataaggactggtcgttccttgggacggacgca- 25077909  T
Q  967 aatcgtgacac 977  Q
    |||||||||||    
T  25077910 aatcgtgacac 25077920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 119; E-Value: 3e-60
Query Start/End: Original strand, 768 - 977
Target Start/End: Original strand, 25135682 - 25135889
Alignment:
Q  768 tttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagcta-ggttgcagggtg 866  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| ||| || | |||||||||||||| ||||| ||||      
T  25135682 tttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttgggatcgtgacgcga-ttggaggtgccgtgagctagggttgtaggggt 25135780  T
Q  867 ccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtcgtttcttgggacggacgcac 966  Q
     ||||||||| |||||||||||||||||||||||||||    |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||     
T  25135781 gcaaatcgtgtcacgattgtgggaaatcgtgacacgatccagaaacttgctcgttaag-tatccttgataaggactggtcgttccttgggacggacgca- 25135878  T
Q  967 aatcgtgacac 977  Q
    |||||||||||    
T  25135879 aatcgtgacac 25135889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 118; E-Value: 1e-59
Query Start/End: Original strand, 760 - 885
Target Start/End: Complemental strand, 29752390 - 29752265
Alignment:
Q  760 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggttg 859  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  29752390 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtgctgccgtgagctaggttg 29752291  T
Q  860 cagggtgccaaatcgtgacacgattg 885  Q
    ||||||||||||||||| ||||||||    
T  29752290 cagggtgccaaatcgtggcacgattg 29752265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 760 - 887
Target Start/End: Complemental strand, 29751724 - 29751597
Alignment:
Q  760 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggttg 859  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  ||||||||||||||||||||||||||||||||    
T  29751724 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacatgaatttggcatcacgacacgatttcgtggtgccgtgagctaggttg 29751625  T
Q  860 cagggtgccaaatcgtgacacgattgtg 887  Q
    ||||||||||||||||||||||||||||    
T  29751624 cagggtgccaaatcgtgacacgattgtg 29751597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 115; E-Value: 8e-58
Query Start/End: Original strand, 760 - 977
Target Start/End: Original strand, 16546216 - 16546430
Alignment:
Q  760 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagcta-ggtt 858  Q
    |||||||||| ||||||||||||||||| ||||||||||||||||||||| ||||| ||||| |||||||||||| || | |||||||||||||| ||||    
T  16546216 tgttgagatt-gtcttcaaatttgtggtttggaagaacagggaaatcgtgccacgattttggaatcgtgacacga-ttggaggtgccgtgagctagggtt 16546313  T
Q  859 gcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtcgtttcttgggac 958  Q
    ||||||||| || |||||||||||||  || |||||||||||||||    |||||||||||||||| |||||||||||||||||||||||| ||||||||    
T  16546314 gcagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaag-tatccttgataaggactggtcgttccttgggac 16546412  T
Q  959 ggacgcacaatcgtgacac 977  Q
    ||||||| |||||||||||    
T  16546413 ggacgca-aatcgtgacac 16546430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 115; E-Value: 8e-58
Query Start/End: Original strand, 760 - 977
Target Start/End: Original strand, 40381889 - 40382103
Alignment:
Q  760 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagcta-ggtt 858  Q
    |||||||||| |||||||||||||||||||| |||||||||||||||||| ||||| ||||| |||||||||||| || | |||||||||||||| ||||    
T  40381889 tgttgagatt-gtcttcaaatttgtggtctgaaagaacagggaaatcgtgccacgattttggaatcgtgacacga-ttggaggtgccgtgagctagggtt 40381986  T
Q  859 gcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtcgtttcttgggac 958  Q
    ||||||||| || |||||||||||||  || |||||||||||||||    |||||||||||||||| |||||||||||||||||||||||| ||||||||    
T  40381987 gcagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaag-tatccttgataaggactggtcgttccttgggac 40382085  T
Q  959 ggacgcacaatcgtgacac 977  Q
    ||||||| |||||||||||    
T  40382086 ggacgca-aatcgtgacac 40382103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 114; E-Value: 3e-57
Query Start/End: Original strand, 760 - 953
Target Start/End: Original strand, 10592844 - 10593034
Alignment:
Q  760 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggttg 859  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| || ||||||||||| |||||||    
T  10592844 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattccg-ggtgccgtgagataggttg 10592941  T
Q  860 cagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtcgtttctt 953  Q
    |||||||| |||||||| |||||||  || |||||||||||||||    |||||||||||||||| ||||| ||||||||||||||||||||||    
T  10592942 cagggtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaag-tatccgtgataaggactggtcgtttctt 10593034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 114; E-Value: 3e-57
Query Start/End: Original strand, 773 - 946
Target Start/End: Complemental strand, 30631936 - 30631764
Alignment:
Q  773 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggttgcagggtgccaaat 872  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||| || |||||||  |||||||    
T  30631936 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagccagtttgcaggacgccaaat 30631837  T
Q  873 cgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtc 946  Q
    |||||||||||| ||||||||||||||||||||   |||||||||||||||| ||||  |||||||||||||||    
T  30631836 cgtgacacgattttgggaaatcgtgacacgattcagaaacttgctcgttaag-tatctctgataaggactggtc 30631764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 760 - 977
Target Start/End: Original strand, 16543994 - 16544208
Alignment:
Q  760 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagcta-ggtt 858  Q
    |||||||||| ||||||||||||||||| ||||||||||||||||||||| ||||| ||||| |||||||||||| || | ||||| |||||||| ||||    
T  16543994 tgttgagatt-gtcttcaaatttgtggtttggaagaacagggaaatcgtgccacgattttggaatcgtgacacga-ttggaggtgctgtgagctagggtt 16544091  T
Q  859 gcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtcgtttcttgggac 958  Q
     |||||||| || |||||||||||||  || |||||||||||||||    |||||||||||||||| |||||||||||||||||||||||| ||||||||    
T  16544092 acagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaag-tatccttgataaggactggtcgttccttgggac 16544190  T
Q  959 ggacgcacaatcgtgacac 977  Q
    ||||||| |||||||||||    
T  16544191 ggacgca-aatcgtgacac 16544208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 106; E-Value: 2e-52
Query Start/End: Original strand, 773 - 946
Target Start/End: Complemental strand, 27450397 - 27450225
Alignment:
Q  773 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggttgcagggtgccaaat 872  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||  || |||||||||||| |||||||  |||||||    
T  27450397 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggggccgtgagctagtttgcaggacgccaaat 27450298  T
Q  873 cgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtc 946  Q
    |||| ||||||  ||||||||||||||||||||   |||||||||||||||| ||||| |||||||||||||||    
T  27450297 cgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaag-tatccctgataaggactggtc 27450225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 102; E-Value: 4e-50
Query Start/End: Original strand, 773 - 946
Target Start/End: Complemental strand, 27445554 - 27445382
Alignment:
Q  773 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggttgcagggtgccaaat 872  Q
    ||||||||||||||||| ||||||||| ||||||||||||||| ||||||||||||||||||||||  || |||||||||||| |||||||  |||||||    
T  27445554 cttcaaatttgtggtctagaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggggccgtgagctagtttgcaggacgccaaat 27445455  T
Q  873 cgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtc 946  Q
    |||| ||||||  ||||||||||||||||||||   |||||||||||||||| ||||| |||||||||||||||    
T  27445454 cgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaag-tatccctgataaggactggtc 27445382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 95; E-Value: 7e-46
Query Start/End: Original strand, 760 - 926
Target Start/End: Original strand, 9352807 - 9352973
Alignment:
Q  760 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggttg 859  Q
    |||||||||||| ||||||||||||||| || |||||||| ||||||||||| ||| | ||||||||||||||||||| ||  ||||||||||| | |||    
T  9352807 tgttgagatttggcttcaaatttgtggtttgaaagaacagagaaatcgtgacgcgattgtggcatcgtgacacgattttgtaatgccgtgagctggtttg 9352906  T
Q  860 cagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagtt 926  Q
    ||||||| ||||||||| ||||||| || |||||||||||||||||| |||||||||| ||||||||    
T  9352907 cagggtgtcaaatcgtggcacgattctgtgaaatcgtgacacgattttcaaacttgctggttaagtt 9352973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 95; E-Value: 7e-46
Query Start/End: Original strand, 773 - 946
Target Start/End: Complemental strand, 43599306 - 43599133
Alignment:
Q  773 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttc-gtggtgccgtgagctaggttgcagggtgccaaa 871  Q
    ||||||||||||||||||||||||||| ||||||||||||||| |||||| |||||||||||||||   || |||||||||||| |||||||  ||||||    
T  43599306 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcgtcgtgacacgatttcaagggggccgtgagctagtttgcaggacgccaaa 43599207  T
Q  872 tcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtc 946  Q
    ||||| ||||||  ||||||||||||||||||||   |||||||||||||||| ||||| |||||||||||||||    
T  43599206 tcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaag-tatccctgataaggactggtc 43599133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 95; E-Value: 7e-46
Query Start/End: Original strand, 773 - 946
Target Start/End: Complemental strand, 43604798 - 43604625
Alignment:
Q  773 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttc-gtggtgccgtgagctaggttgcagggtgccaaa 871  Q
    ||||||||||||||||||||||||||| ||||||||||||||| |||||| |||||||||||||||   || |||||||||||| |||||||  ||||||    
T  43604798 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcgtcgtgacacgatttcaagggggccgtgagctagtttgcaggacgccaaa 43604699  T
Q  872 tcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtc 946  Q
    ||||| ||||||  ||||||||||||||||||||   |||||||||||||||| ||||| |||||||||||||||    
T  43604698 tcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaag-tatccctgataaggactggtc 43604625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 95; E-Value: 7e-46
Query Start/End: Original strand, 773 - 946
Target Start/End: Complemental strand, 43610290 - 43610117
Alignment:
Q  773 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttc-gtggtgccgtgagctaggttgcagggtgccaaa 871  Q
    ||||||||||||||||||||||||||| ||||||||||||||| |||||| |||||||||||||||   || |||||||||||| |||||||  ||||||    
T  43610290 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcgtcgtgacacgatttcaagggggccgtgagctagtttgcaggacgccaaa 43610191  T
Q  872 tcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtc 946  Q
    ||||| ||||||  ||||||||||||||||||||   |||||||||||||||| ||||| |||||||||||||||    
T  43610190 tcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaag-tatccctgataaggactggtc 43610117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 94; E-Value: 3e-45
Query Start/End: Original strand, 773 - 942
Target Start/End: Original strand, 1456650 - 1456818
Alignment:
Q  773 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggttgcagggtgccaaat 872  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||  || |||||||||||| || ||||  |||||||    
T  1456650 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggggccgtgagctagtttacaggacgccaaat 1456749  T
Q  873 cgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggact 942  Q
    |||| ||||||  ||||||||||||||||||||   ||||||||| |||||| ||||| |||||||||||    
T  1456750 cgtggcacgatcttgggaaatcgtgacacgattcagaaacttgcttgttaag-tatccctgataaggact 1456818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 93; E-Value: 1e-44
Query Start/End: Original strand, 760 - 884
Target Start/End: Complemental strand, 15465125 - 15465001
Alignment:
Q  760 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggttg 859  Q
    |||||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||| ||| ||||||||||| | |||    
T  15465125 tgttgagatttggcttcaaatttgtggtctgaaagaacagagaaatcgtgacacgaatttggtatcgtgacacgattttgtgatgccgtgagctggtttg 15465026  T
Q  860 cagggtgccaaatcgtgacacgatt 884  Q
    |||||||||||||||||||||||||    
T  15465025 cagggtgccaaatcgtgacacgatt 15465001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 85; E-Value: 6e-40
Query Start/End: Original strand, 773 - 925
Target Start/End: Original strand, 29402562 - 29402714
Alignment:
Q  773 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggttgcagggtgccaaat 872  Q
    ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||| |||||||||  |  ||| |||||||| |||||||  |||||||    
T  29402562 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtggcacgatttcaagtggccatgagctagtttgcaggacgccaaat 29402661  T
Q  873 cgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagt 925  Q
    |||| ||||||  ||||||||||||||||||||   |||||||||||||||||    
T  29402662 cgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagt 29402714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 85; E-Value: 6e-40
Query Start/End: Original strand, 760 - 884
Target Start/End: Original strand, 36931843 - 36931967
Alignment:
Q  760 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggttg 859  Q
    |||||||||||  ||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| |||||||| ||| || |||||||| | |||    
T  36931843 tgttgagatttcgcttcaaatttgtggtttggaagaacagagaaatcgtgacacgaatttggcatcgtggcacgattttgtgatgtcgtgagctggtttg 36931942  T
Q  860 cagggtgccaaatcgtgacacgatt 884  Q
    |||||||||||||||||||||||||    
T  36931943 cagggtgccaaatcgtgacacgatt 36931967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 78; E-Value: 9e-36
Query Start/End: Original strand, 773 - 946
Target Start/End: Complemental strand, 15045267 - 15045096
Alignment:
Q  773 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggttgcagggtgccaaat 872  Q
    |||||||||||| || ||||||||||| ||||||||||||||| ||||| ||||||||||||||| | | |||||||||| || |||||||  |||||||    
T  15045267 cttcaaatttgtagtttggaagaacagagaaatcgtgacacgattttggaatcgtgacacgattt-gagatgccgtgagccagtttgcaggacgccaaat 15045169  T
Q  873 cgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtc 946  Q
    |||| ||||||  ||||||||||||||||||||   |||||||||| ||||| ||||  |||||||||||||||    
T  15045168 cgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcattaag-tatcactgataaggactggtc 15045096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 843 - 948
Target Start/End: Complemental strand, 38219947 - 38219843
Alignment:
Q  843 tgccgtgagctaggttgcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggact 942  Q
    ||||||||||| | ||| |||||||||||||||||||||||  |||||||| |||||||||||| |||||||||| |||||||| ||| |||||||||||    
T  38219947 tgccgtgagctggtttgtagggtgccaaatcgtgacacgatcttgggaaattgtgacacgattttcaaacttgcttgttaagtt-tccatgataaggact 38219849  T
Q  943 ggtcgt 948  Q
    ||||||    
T  38219848 ggtcgt 38219843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 823 - 946
Target Start/End: Complemental strand, 43592811 - 43592688
Alignment:
Q  823 atcgtgacacgatttcgtggtg-ccgtgagctaggttgcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgtt 921  Q
    ||||||||||||||||  || | ||||||||||| |||||||  ||||||||||| ||||||  ||||||||||||||||||||   |||||||||||||    
T  43592811 atcgtgacacgatttcaagggggccgtgagctagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgtt 43592712  T
Q  922 aagttatccttgataaggactggtc 946  Q
    ||| ||||| |||||||||||||||    
T  43592711 aag-tatccctgataaggactggtc 43592688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 773 - 946
Target Start/End: Original strand, 28807088 - 28807260
Alignment:
Q  773 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgag-ctaggttgcagggtgccaaa 871  Q
    |||||||||| |||||||||||||||| | ||||||| ||||| ||||  ||||||||||||| | | | ||||||||| | || ||||||||||| |||    
T  28807088 cttcaaatttatggtctggaagaacagaggaatcgtgtcacgattttgcaatcgtgacacgatct-gagatgccgtgagccaagtttgcagggtgcaaaa 28807186  T
Q  872 tcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtc 946  Q
    ||||| ||||||  |||||||||||||||||||    ||||||| | |||||| ||||  |||||||||||||||    
T  28807187 tcgtggcacgatcttgggaaatcgtgacacgatccagaaacttgttggttaag-tatctctgataaggactggtc 28807260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 823 - 946
Target Start/End: Complemental strand, 31180787 - 31180665
Alignment:
Q  823 atcgtgacacgatttcgtggtgccgtgagctaggttgcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgtta 922  Q
    ||||||||||||||||  |||| |||||||||| |||||||  ||||||||||| ||||||  ||||||||||||||||||||   | |||| |||||||    
T  31180787 atcgtgacacgatttcaaggtgtcgtgagctagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagagactttctcgtta 31180688  T
Q  923 agttatccttgataaggactggtc 946  Q
    || ||||  |||||||||||||||    
T  31180687 ag-tatcactgataaggactggtc 31180665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 756 - 945
Target Start/End: Original strand, 37556121 - 37556308
Alignment:
Q  756 tttttgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgag-cta 854  Q
    |||||||||| ||||| ||||||||||||||||||||||||||| | ||||||||||||| || |  ||||||||||||| | | | ||||||||| | |    
T  37556121 tttttgttga-atttggcttcaaatttgtggtctggaagaacagagtaatcgtgacacgatttggtaatcgtgacacgatct-gagatgccgtgagccaa 37556218  T
Q  855 ggttgcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggt 945  Q
    | ||  | || | ||||||||| ||||||  |||||||| |||||||||| |  ||||||||| |||||| ||||  ||||||||||||||    
T  37556219 gttttgatggaggcaaatcgtggcacgatcttgggaaattgtgacacgatctagaaacttgctggttaag-tatctctgataaggactggt 37556308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 767 - 945
Target Start/End: Original strand, 37560953 - 37561130
Alignment:
Q  767 atttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgag-ctaggttgcagggt 865  Q
    ||||| ||||||||||||||||||||||||||| | ||||||||||||| ||    ||||||||||||| | | | ||||||||| | || ||  | ||     
T  37560953 atttggcttcaaatttgtggtctggaagaacagagtaatcgtgacacgatttgataatcgtgacacgatct-gagatgccgtgagccaagttttgatgga 37561051  T
Q  866 gccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggt 945  Q
    | ||||||||| ||||||  |||||||||||||||||||    ||||||||| |||||| ||||  ||||||||||||||    
T  37561052 ggcaaatcgtggcacgatcttgggaaatcgtgacacgatccagaaacttgctggttaag-tatctctgataaggactggt 37561130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 760 - 810
Target Start/End: Complemental strand, 35388246 - 35388196
Alignment:
Q  760 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtga 810  Q
    |||||||||||| ||||||||||||||||||||||||||| ||||||||||    
T  35388246 tgttgagatttgacttcaaatttgtggtctggaagaacagagaaatcgtga 35388196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 890 - 959
Target Start/End: Complemental strand, 35388169 - 35388101
Alignment:
Q  890 aaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtcgtttcttgggacg 959  Q
    |||| |||||||||||| ||||||||||||||||| ||||||||||||||||||||| |  |||||||||    
T  35388169 aaattgtgacacgattttcaaacttgctcgttaag-tatccttgataaggactggtcataccttgggacg 35388101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 760 - 946
Target Start/End: Complemental strand, 2785963 - 2785778
Alignment:
Q  760 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggca-tcgtgacacgatttcgtggtgccgtgagctaggtt 858  Q
    |||||| | ||| ||||||||||||||| ||||||||||| | ||||||| | ||| ||||||| ||||||||||||   | | |||||||||| | |||    
T  2785963 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcgcga-tttggcaatcgtgacacgatcg-gagatgccgtgagccaagtt 2785866  T
Q  859 -gcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtc 946  Q
     || ||  || |||||||| ||||||  ||||||||||||||||||||   ||||||||| |||||| ||||  |||||||||||||||    
T  2785865 tgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaag-tatctctgataaggactggtc 2785778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 760 - 946
Target Start/End: Complemental strand, 33768772 - 33768587
Alignment:
Q  760 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggca-tcgtgacacgatttcgtggtgccgtgagctaggtt 858  Q
    |||||| | ||| ||||||||||||||| ||||||||||| | ||||||| | ||| ||||||| ||||||||||||   | | |||||||||| | |||    
T  33768772 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcgcga-tttggcaatcgtgacacgatcg-gagatgccgtgagccaagtt 33768675  T
Q  859 -gcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtc 946  Q
     || ||  || |||||||| ||||||  ||||||||||||||||||||   ||||||||| |||||| ||||  |||||||||||||||    
T  33768674 tgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaag-tatctctgataaggactggtc 33768587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 760 - 946
Target Start/End: Complemental strand, 33791904 - 33791719
Alignment:
Q  760 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggca-tcgtgacacgatttcgtggtgccgtgagctaggtt 858  Q
    |||||| | ||| ||||||||||||||| ||||||||||| | ||||||| | ||| ||||||| ||||||||||||   | | |||||||||| | |||    
T  33791904 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcgcga-tttggcaatcgtgacacgatcg-gagatgccgtgagccaagtt 33791807  T
Q  859 -gcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtc 946  Q
     || ||  || |||||||| ||||||  ||||||||||||||||||||   ||||||||| |||||| ||||  |||||||||||||||    
T  33791806 tgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaag-tatctctgataaggactggtc 33791719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 773 - 815
Target Start/End: Complemental strand, 31180818 - 31180776
Alignment:
Q  773 cttcaaatttgtggtctggaagaacagggaaatcgtgacacga 815  Q
    ||||||||||||||||||||||||||| |||||||||||||||    
T  31180818 cttcaaatttgtggtctggaagaacagagaaatcgtgacacga 31180776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 773 - 815
Target Start/End: Complemental strand, 43592842 - 43592800
Alignment:
Q  773 cttcaaatttgtggtctggaagaacagggaaatcgtgacacga 815  Q
    ||||||||||||||||||||||||||| |||||||||||||||    
T  43592842 cttcaaatttgtggtctggaagaacagagaaatcgtgacacga 43592800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 758 - 815
Target Start/End: Complemental strand, 14520856 - 14520799
Alignment:
Q  758 tttgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacga 815  Q
    |||||||| | ||| ||||||||||||||| ||||||||||| |||||||||||||||    
T  14520856 tttgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgacacga 14520799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 890 - 946
Target Start/End: Complemental strand, 29751615 - 29751560
Alignment:
Q  890 aaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtc 946  Q
    ||||||||||||||||   |||||||||||||||| |||||||||||||||||||||    
T  29751615 aaatcgtgacacgattgtgaaacttgctcgttaag-tatccttgataaggactggtc 29751560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 857 - 915
Target Start/End: Original strand, 11916541 - 11916599
Alignment:
Q  857 ttgcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttg 915  Q
    |||||||||||  ||||||| ||||||| ||||||| ||||||||||||| ||||||||    
T  11916541 ttgcagggtgctcaatcgtgtcacgattttgggaaaacgtgacacgattttcaaacttg 11916599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 857 - 906
Target Start/End: Complemental strand, 42428912 - 42428863
Alignment:
Q  857 ttgcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgattt 906  Q
    |||||||||| | ||||||||||||||| ||||||| |||||||||||||    
T  42428912 ttgcagggtgtccaatcgtgacacgattttgggaaaacgtgacacgattt 42428863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 837 - 884
Target Start/End: Complemental strand, 35388201 - 35388154
Alignment:
Q  837 tcgtggtgccgtgagctaggttgcagggtgccaaatcgtgacacgatt 884  Q
    ||||| ||||||||||| | |||||||||||||||| |||||||||||    
T  35388201 tcgtgatgccgtgagctggtttgcagggtgccaaattgtgacacgatt 35388154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 758 - 835
Target Start/End: Original strand, 31396487 - 31396564
Alignment:
Q  758 tttgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggc-atcgtgacacgat 835  Q
    |||||||| | ||| ||||||||||||||| ||| ||||||| | ||||||| |||| ||||||| |||||||||||||    
T  31396487 tttgttgaaaattggcttcaaatttgtggtttgggagaacagaggaatcgtgtcacg-atttggcaatcgtgacacgat 31396564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 857 - 906
Target Start/End: Original strand, 213018 - 213067
Alignment:
Q  857 ttgcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgattt 906  Q
    |||||||| | | ||||||||||||||| ||||||| |||||||||||||    
T  213018 ttgcagggcgtccaatcgtgacacgattttgggaaaacgtgacacgattt 213067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 768 - 813
Target Start/End: Original strand, 11916452 - 11916497
Alignment:
Q  768 tttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacac 813  Q
    |||| ||||||||||||||| || |||||||| |||||||||||||    
T  11916452 tttggcttcaaatttgtggtttgaaagaacagagaaatcgtgacac 11916497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 857 - 906
Target Start/End: Complemental strand, 42426729 - 42426680
Alignment:
Q  857 ttgcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgattt 906  Q
    |||||||||| | ||||||||||||||| ||||||| |||||||| ||||    
T  42426729 ttgcagggtgtccaatcgtgacacgattttgggaaaacgtgacacaattt 42426680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 868 - 905
Target Start/End: Complemental strand, 43592671 - 43592635
Alignment:
Q  868 caaatcgtgacacgattgtgggaaatcgtgacacgatt 905  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  43592671 caaatcgtgacacgatt-tgggaaatcgtgacacgatt 43592635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 868 - 905
Target Start/End: Complemental strand, 43599116 - 43599080
Alignment:
Q  868 caaatcgtgacacgattgtgggaaatcgtgacacgatt 905  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  43599116 caaatcgtgacacgatt-tgggaaatcgtgacacgatt 43599080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 868 - 905
Target Start/End: Complemental strand, 43604608 - 43604572
Alignment:
Q  868 caaatcgtgacacgattgtgggaaatcgtgacacgatt 905  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  43604608 caaatcgtgacacgatt-tgggaaatcgtgacacgatt 43604572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 868 - 905
Target Start/End: Complemental strand, 43610100 - 43610064
Alignment:
Q  868 caaatcgtgacacgattgtgggaaatcgtgacacgatt 905  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  43610100 caaatcgtgacacgatt-tgggaaatcgtgacacgatt 43610064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 171; Significance: 3e-91; HSPs: 74)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 171; E-Value: 3e-91
Query Start/End: Original strand, 760 - 977
Target Start/End: Original strand, 800685 - 800902
Alignment:
Q  760 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggttg 859  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | |||    
T  800685 tgttgagatttgtcttcgaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagctggtttg 800784  T
Q  860 cagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtcgtttcttgggacg 959  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||||||||||||    
T  800785 cggggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagtt-tccatgataaggaatggtcgtttcttgggacg 800883  T
Q  960 gacgca-caatcgtgacac 977  Q
     ||||| ||||||||||||    
T  800884 aacgcaccaatcgtgacac 800902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 144; E-Value: 4e-75
Query Start/End: Original strand, 757 - 956
Target Start/End: Original strand, 6716082 - 6716279
Alignment:
Q  757 ttttgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctagg 856  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||||||    
T  6716082 ttttgttgagatt-gtcttgaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctagg 6716180  T
Q  857 ttgcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtcgtttcttggg 956  Q
    ||||||||||| |||||||| |||||||||||||||||||||||||||    |||||||||||||||| |||||||||||||||||||||||||||||||    
T  6716181 ttgcagggtgcaaaatcgtgtcacgattgtgggaaatcgtgacacgatcgtgaaacttgctcgttaag-tatccttgataaggactggtcgtttcttggg 6716279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 137; E-Value: 6e-71
Query Start/End: Original strand, 760 - 956
Target Start/End: Original strand, 54634710 - 54634904
Alignment:
Q  760 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggttg 859  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| |||||||||||||| ||||    
T  54634710 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcattgtgacacgatttcggggtgccgtgagctaagttg 54634808  T
Q  860 cagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtcgtttcttggg 956  Q
    |||||||| |||||||| |||||||||||||||||||||||||||    |||||||||||||||| ||||||||||||||||||||| |||||||||    
T  54634809 cagggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgatcgtgaaacttgctcgttaag-tatccttgataaggactggtcttttcttggg 54634904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 131; E-Value: 2e-67
Query Start/End: Original strand, 760 - 977
Target Start/End: Complemental strand, 23198530 - 23198313
Alignment:
Q  760 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggttg 859  Q
    |||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||| ||| ||||||||||| | |||    
T  23198530 tgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttgacatcgtgacacgattttgtgatgccgtgagctggtttg 23198431  T
Q  860 cagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtcgtttcttgggacg 959  Q
    |||||||||||||||||||||||||  | | |||||||||||||||||||||||||||||||||||| |||  ||||||||||||||||  |||| ||||    
T  23198430 cagggtgccaaatcgtgacacgatttggaggaatcgtgacacgatttgcaaacttgctcgttaagtt-tccaggataaggactggtcgtaccttgtgacg 23198332  T
Q  960 gacgca-caatcgtgacac 977  Q
     ||| | ||||||||||||    
T  23198331 tacgtaccaatcgtgacac 23198313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 129; E-Value: 3e-66
Query Start/End: Original strand, 760 - 948
Target Start/End: Complemental strand, 23200729 - 23200542
Alignment:
Q  760 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggttg 859  Q
    |||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| ||| ||||||| | |||    
T  23200729 tgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgatgctgtgagctggtttg 23200630  T
Q  860 cagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtcgt 948  Q
    |||||||||||||||||||||||||  | | |||||||||||||||||||||||||||||||||||| |||  ||||||||||||||||    
T  23200629 cagggtgccaaatcgtgacacgatttggaggaatcgtgacacgatttgcaaacttgctcgttaagtt-tccaggataaggactggtcgt 23200542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 127; E-Value: 5e-65
Query Start/End: Original strand, 760 - 977
Target Start/End: Complemental strand, 1306604 - 1306387
Alignment:
Q  760 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggttg 859  Q
    |||||||||||| |||||||||| |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||| |||||||| | |||    
T  1306604 tgttgagatttggcttcaaatttatggtctggaagaacagagaaatcgtgacatgaatttggcatcgtgacacgatttcgtggtgtcgtgagctggtttg 1306505  T
Q  860 cagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtcgtttcttgggacg 959  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||  ||||||||||||||||||| |||  ||||||||| ||||||  |||| ||||    
T  1306504 cagggtgccaaatcgtgacacgatcttgggaaatcgtgacacgattctcaaacttgctcgttaagtt-tccaggataaggacaggtcgtaccttgtgacg 1306406  T
Q  960 gacgca-caatcgtgacac 977  Q
     ||| | ||||||||||||    
T  1306405 tacgtaccaatcgtgacac 1306387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 124; E-Value: 3e-63
Query Start/End: Original strand, 759 - 977
Target Start/End: Original strand, 25637012 - 25637227
Alignment:
Q  759 ttgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagcta-ggt 857  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| |||| || |||||| |||    
T  25637012 ttgttgagatt-gtctttaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggcatcgtgacacgatttcgaggtg-cgagagctagggt 25637109  T
Q  858 tgcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtcgtttcttggga 957  Q
    |||||||   ||||||||| |||||||||||||||||||||||||||    |||||||||||||||| |||||||||||||||||||||||| |||||||    
T  25637110 tgcaggggtgcaaatcgtggcacgattgtgggaaatcgtgacacgatcgtgaaacttgctcgttaag-tatccttgataaggactggtcgttccttggga 25637208  T
Q  958 cggacgcacaatcgtgacac 977  Q
    |||||||| |||||||||||    
T  25637209 cggacgca-aatcgtgacac 25637227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 118; E-Value: 1e-59
Query Start/End: Original strand, 773 - 946
Target Start/End: Original strand, 40372268 - 40372440
Alignment:
Q  773 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggttgcagggtgccaaat 872  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||  |||||||    
T  40372268 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagctagtttgcaggacgccaaat 40372367  T
Q  873 cgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtc 946  Q
    |||| ||||||  ||||||||||||||||||||   |||||||||||||||| |||||||||||||||||||||    
T  40372368 cgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaag-tatccttgataaggactggtc 40372440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 759 - 926
Target Start/End: Original strand, 26928079 - 26928246
Alignment:
Q  759 ttgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggtt 858  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||  ||||||||||| | ||    
T  26928079 ttgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgttatgccgtgagctggttt 26928178  T
Q  859 gcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagtt 926  Q
    |||||||||||||||||||||| ||  || | |||||||||||||||| |||||||||||||||||||    
T  26928179 gcagggtgccaaatcgtgacacaatcttgtggaatcgtgacacgattttcaaacttgctcgttaagtt 26928246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 115; E-Value: 8e-58
Query Start/End: Original strand, 760 - 926
Target Start/End: Original strand, 33386137 - 33386303
Alignment:
Q  760 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggttg 859  Q
    |||||||||||| |||||||||||||||| | |||||||| ||||||||||||||||||||||||||||||||||||| ||| ||||||||||| | |||    
T  33386137 tgttgagatttggcttcaaatttgtggtccgaaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgatgccgtgagctggtttg 33386236  T
Q  860 cagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagtt 926  Q
    ||||||||||||||||||||||||| || | |||||||||||||||| |||||||||| ||||||||    
T  33386237 cagggtgccaaatcgtgacacgattttgtggaatcgtgacacgattttcaaacttgctggttaagtt 33386303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 114; E-Value: 3e-57
Query Start/End: Original strand, 773 - 946
Target Start/End: Complemental strand, 8477990 - 8477818
Alignment:
Q  773 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggttgcagggtgccaaat 872  Q
    ||||||||||||||||||||||||||| ||||| ||||||||| ||||||||||||||||||||||| ||||||||||||||| |||| || ||||||||    
T  8477990 cttcaaatttgtggtctggaagaacagagaaattgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagctagtttgctggatgccaaat 8477891  T
Q  873 cgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtc 946  Q
    |||| ||||||  ||||||||||||||||||||   |||||||||||||||| |||||||||||||||||||||    
T  8477890 cgtggcacgatcttgggaaatcgtgacacgattgagaaacttgctcgttaag-tatccttgataaggactggtc 8477818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 112; E-Value: 5e-56
Query Start/End: Original strand, 760 - 977
Target Start/End: Complemental strand, 4599107 - 4598892
Alignment:
Q  760 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagcta-ggtt 858  Q
    |||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| ||||| |||| |||||||||||| | |||||||||||| ||||    
T  4599107 tgttgagatt-gtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttgggatcgcgacacgatttcg-gatgccgtgagctagggtt 4599010  T
Q  859 gcagggtgccaaatcgtgacacga-ttgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtcgtttcttggga 957  Q
    ||||||   ||||||||| ||||| || |||||||||||||||||||    |||||||||||||||| |||||||||||||||||||||||| |||||||    
T  4599009 gcaggggtgcaaatcgtggcacgatttctgggaaatcgtgacacgatcaagaaacttgctcgttaag-tatccttgataaggactggtcgttccttggga 4598911  T
Q  958 cggacgcacaatcgtgacac 977  Q
    |||||||| |||||||||||    
T  4598910 cggacgca-aatcgtgacac 4598892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 112; E-Value: 5e-56
Query Start/End: Original strand, 760 - 977
Target Start/End: Complemental strand, 4601328 - 4601113
Alignment:
Q  760 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagcta-ggtt 858  Q
    |||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| ||||| |||| |||||||||||| | |||||||||||| ||||    
T  4601328 tgttgagatt-gtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttgggatcgcgacacgatttcg-gatgccgtgagctagggtt 4601231  T
Q  859 gcagggtgccaaatcgtgacacga-ttgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtcgtttcttggga 957  Q
    ||||||   ||||||||| ||||| || |||||||||||||||||||    |||||||||||||||| |||||||||||||||||||||||| |||||||    
T  4601230 gcaggggtgcaaatcgtggcacgatttctgggaaatcgtgacacgatcaagaaacttgctcgttaag-tatccttgataaggactggtcgttccttggga 4601132  T
Q  958 cggacgcacaatcgtgacac 977  Q
    |||||||| |||||||||||    
T  4601131 cggacgca-aatcgtgacac 4601113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 112; E-Value: 5e-56
Query Start/End: Original strand, 768 - 977
Target Start/End: Original strand, 10055812 - 10056020
Alignment:
Q  768 tttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagcta-ggttgcagggtg 866  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| ||||| |||||||| |||||||| | ||||||||| || ||||||||||      
T  10055812 tttgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttcg-gatgccgtgagttagggttgcaggggt 10055910  T
Q  867 ccaaatcgtgacacgattgtggg-aaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtcgtttcttgggacggacgca 965  Q
     ||||||||||||||||| |||| |||||||||||||||    |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||    
T  10055911 gcaaatcgtgacacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaag-tatccttgataaggactggtcgttccttgggacggacgca 10056009  T
Q  966 caatcgtgacac 977  Q
     |||||||||||    
T  10056010 -aatcgtgacac 10056020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 112; E-Value: 5e-56
Query Start/End: Original strand, 768 - 977
Target Start/End: Original strand, 10066922 - 10067130
Alignment:
Q  768 tttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagcta-ggttgcagggtg 866  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| ||||| |||||||| |||||||| | ||||||||| || ||||||||||      
T  10066922 tttgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttcg-gatgccgtgagttagggttgcaggggt 10067020  T
Q  867 ccaaatcgtgacacgattgtggg-aaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtcgtttcttgggacggacgca 965  Q
     ||||||||||||||||| |||| |||||||||||||||    |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||    
T  10067021 gcaaatcgtgacacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaag-tatccttgataaggactggtcgttccttgggacggacgca 10067119  T
Q  966 caatcgtgacac 977  Q
     |||||||||||    
T  10067120 -aatcgtgacac 10067130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 111; E-Value: 2e-55
Query Start/End: Original strand, 760 - 977
Target Start/End: Original strand, 3617034 - 3617248
Alignment:
Q  760 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagcta-ggtt 858  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| | |||||||||||| ||||    
T  3617034 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcg-gatgccgtgagctagggtt 3617131  T
Q  859 gcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtcgtttcttgggac 958  Q
    ||||||   ||||||||| |||||||  || |||||||||||||||    |||||||||||||||| |||||||||||| | ||||||||| ||||||||    
T  3617132 gcaggggtgcaaatcgtgtcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaag-tatccttgataacggctggtcgttccttgggac 3617230  T
Q  959 ggacgcacaatcgtgacac 977  Q
    ||||||| |||||||||||    
T  3617231 ggacgca-aatcgtgacac 3617248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 108; E-Value: 1e-53
Query Start/End: Original strand, 768 - 977
Target Start/End: Original strand, 10058034 - 10058242
Alignment:
Q  768 tttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagcta-ggttgcagggtg 866  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| ||||| |||||||| |||||||| | ||||||||| || ||||||||||      
T  10058034 tttgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttcg-gatgccgtgagttagggttgcaggggt 10058132  T
Q  867 ccaaatcgtgacacgattgtggg-aaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtcgtttcttgggacggacgca 965  Q
     ||||||||||||||||| |||| |||||||||||||||    |||||||||||||||| |||||||||||||||||||||||| ||||||||| |||||    
T  10058133 gcaaatcgtgacacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaag-tatccttgataaggactggtcgttccttgggacgtacgca 10058231  T
Q  966 caatcgtgacac 977  Q
     |||||||||||    
T  10058232 -aatcgtgacac 10058242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 108; E-Value: 1e-53
Query Start/End: Original strand, 768 - 977
Target Start/End: Original strand, 10060256 - 10060464
Alignment:
Q  768 tttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagcta-ggttgcagggtg 866  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| ||||| |||||||| |||||||| | ||||||||| || ||||||||||      
T  10060256 tttgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttcg-gatgccgtgagttagggttgcaggggt 10060354  T
Q  867 ccaaatcgtgacacgattgtggg-aaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtcgtttcttgggacggacgca 965  Q
     ||||||||||||||||| |||| |||||||||||||||    |||||||||||||||| |||||||||||||||||||||||| ||||||||| |||||    
T  10060355 gcaaatcgtgacacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaag-tatccttgataaggactggtcgttccttgggacgtacgca 10060453  T
Q  966 caatcgtgacac 977  Q
     |||||||||||    
T  10060454 -aatcgtgacac 10060464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 108; E-Value: 1e-53
Query Start/End: Original strand, 768 - 977
Target Start/End: Original strand, 10062478 - 10062686
Alignment:
Q  768 tttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagcta-ggttgcagggtg 866  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| ||||| |||||||| |||||||| | ||||||||| || ||||||||||      
T  10062478 tttgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttcg-gatgccgtgagttagggttgcaggggt 10062576  T
Q  867 ccaaatcgtgacacgattgtggg-aaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtcgtttcttgggacggacgca 965  Q
     ||||||||||||||||| |||| |||||||||||||||    |||||||||||||||| |||||||||||||||||||||||| ||||||||| |||||    
T  10062577 gcaaatcgtgacacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaag-tatccttgataaggactggtcgttccttgggacgtacgca 10062675  T
Q  966 caatcgtgacac 977  Q
     |||||||||||    
T  10062676 -aatcgtgacac 10062686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 108; E-Value: 1e-53
Query Start/End: Original strand, 768 - 977
Target Start/End: Original strand, 10064700 - 10064908
Alignment:
Q  768 tttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagcta-ggttgcagggtg 866  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| ||||| |||||||| |||||||| | ||||||||| || ||||||||||      
T  10064700 tttgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttcg-gatgccgtgagttagggttgcaggggt 10064798  T
Q  867 ccaaatcgtgacacgattgtggg-aaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtcgtttcttgggacggacgca 965  Q
     ||||||||||||||||| |||| |||||||||||||||    |||||||||||||||| |||||||||||||||||||||||| ||||||||| |||||    
T  10064799 gcaaatcgtgacacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaag-tatccttgataaggactggtcgttccttgggacgtacgca 10064897  T
Q  966 caatcgtgacac 977  Q
     |||||||||||    
T  10064898 -aatcgtgacac 10064908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 760 - 926
Target Start/End: Complemental strand, 27453581 - 27453415
Alignment:
Q  760 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggttg 859  Q
    |||||||||||| |||||||||||||||||| |||| ||| ||||| ||||||||||||||||||||||||||||||| ||| ||||||||||| | |||    
T  27453581 tgttgagatttggcttcaaatttgtggtctgaaagagcagagaaattgtgacacgaatttggcatcgtgacacgattttgtgatgccgtgagctggtttg 27453482  T
Q  860 cagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagtt 926  Q
     ||||||||||||||||||| ||||||| | |||||||||||||||| |||||||||| ||||||||    
T  27453481 tagggtgccaaatcgtgacatgattgtgtggaatcgtgacacgattttcaaacttgctggttaagtt 27453415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 106; E-Value: 2e-52
Query Start/End: Original strand, 757 - 926
Target Start/End: Complemental strand, 37726302 - 37726133
Alignment:
Q  757 ttttgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctagg 856  Q
    ||||||||||||||| ||||||||||||||| ||||||||||| ||||||||||||||||||||  ||||||||||||||| ||| ||||||||||| |     
T  37726302 ttttgttgagatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgaatttgatatcgtgacacgattttgtgatgccgtgagctggt 37726203  T
Q  857 ttgcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagtt 926  Q
    |||||||||| ||||||||||||||||| || | |||||||||||||||| |||||||| | ||||||||    
T  37726202 ttgcagggtgtcaaatcgtgacacgattttgtggaatcgtgacacgattttcaaacttgttggttaagtt 37726133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 103; E-Value: 1e-50
Query Start/End: Original strand, 753 - 977
Target Start/End: Original strand, 10208771 - 10208993
Alignment:
Q  753 ttctttttgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagc 852  Q
    |||||| |||||||||| ||||||||||||||||| |||||||||||||||||| |||||||| ||||| |||||||| |||||||| | |||||||||     
T  10208771 ttctttgtgttgagatt-gtcttcaaatttgtggtttggaagaacagggaaatcatgacacgattttggtatcgtgacgcgatttcg-gatgccgtgagt 10208868  T
Q  853 ta-ggttgcagggtgccaaatcgtgacacgattgtggg-aaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtcgttt 950  Q
    || ||||||||||   ||||||||| ||||||| |||| |||||||||||||||    |||||||||||||||  ||||||||||||||||||||||||     
T  10208869 tagggttgcaggggtgcaaatcgtggcacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaa-atatccttgataaggactggtcgttc 10208967  T
Q  951 cttgggacggacgcacaatcgtgacac 977  Q
    ||||||||||||||| |||||||||||    
T  10208968 cttgggacggacgca-aatcgtgacac 10208993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 102; E-Value: 4e-50
Query Start/End: Original strand, 773 - 946
Target Start/End: Original strand, 22172674 - 22172846
Alignment:
Q  773 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggttgcagggtgccaaat 872  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||| || |||||||  |||||||    
T  22172674 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagccagtttgcaggacgccaaat 22172773  T
Q  873 cgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtc 946  Q
    |||| ||||||  ||||||||||||||||||||   ||||||||||||||||  |||  |||||||||||||||    
T  22172774 cgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaag-gatctctgataaggactggtc 22172846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 101; E-Value: 2e-49
Query Start/End: Original strand, 773 - 977
Target Start/End: Complemental strand, 7167870 - 7167668
Alignment:
Q  773 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggttgcagggtgccaaat 872  Q
    ||||||||||||| ||||||||||||| ||||||||||||||| |||||||||||||||| |||||  ||||||||||||||| |||||||  |||||||    
T  7167870 cttcaaatttgtgttctggaagaacagagaaatcgtgacacgattttggcatcgtgacacaatttcaaggtgccgtgagctagtttgcaggacgccaaat 7167771  T
Q  873 cgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtcgtttcttgggacggacgcacaatcgt 972  Q
    |||| ||||||  ||||||||||||||||||||   |||||||||||||||| ||||  ||||||||||||||| |  |||||| | |||||| ||||||    
T  7167770 cgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaag-tatcactgataaggactggtcataccttgggtcagacgca-aatcgt 7167673  T
Q  973 gacac 977  Q
    |||||    
T  7167672 gacac 7167668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 101; E-Value: 2e-49
Query Start/End: Original strand, 760 - 884
Target Start/End: Complemental strand, 7782712 - 7782588
Alignment:
Q  760 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggttg 859  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| | |||    
T  7782712 tgttgagatttggcttcaaatttgtggtctagaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgcggtgagctggtttg 7782613  T
Q  860 cagggtgccaaatcgtgacacgatt 884  Q
    |||||||||||||||||||||||||    
T  7782612 cagggtgccaaatcgtgacacgatt 7782588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 98; E-Value: 1e-47
Query Start/End: Original strand, 823 - 956
Target Start/End: Original strand, 6718331 - 6718463
Alignment:
Q  823 atcgtgacacgatttcgtggtgccgtgagctaggttgcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgtta 922  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||    ||||||||||||||    
T  6718331 atcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaaatcgtgtcacgattgtgggaaatcgtgacacgatcgtgaaacttgctcgtta 6718430  T
Q  923 agttatccttgataaggactggtcgtttcttggg 956  Q
    || |||||||||||||||||||||||||||||||    
T  6718431 ag-tatccttgataaggactggtcgtttcttggg 6718463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 96; E-Value: 2e-46
Query Start/End: Original strand, 760 - 977
Target Start/End: Original strand, 10210978 - 10211193
Alignment:
Q  760 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagcta-ggtt 858  Q
    |||||||||| ||||| ||||||||||| ||||||||||||||||||||||||||| ||||| |||||||| |||||| | | ||||||||| || ||||    
T  10210978 tgttgagatt-gtctttaaatttgtggtttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttag-gatgccgtgagttagggtt 10211075  T
Q  859 gcagggtgccaaatcgtgacacgattgtggg-aaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtcgtttcttggga 957  Q
    ||||||   ||||||||| ||||||| |||| ||||| |||||||||    |||||||||||||||| |||||||||||||||||||||||| |||||||    
T  10211076 gcaggggtgcaaatcgtggcacgattttgggaaaatcatgacacgatcaagaaacttgctcgttaag-tatccttgataaggactggtcgttccttggga 10211174  T
Q  958 cggacgcacaatcgtgacac 977  Q
    |||||||| |||||||||||    
T  10211175 cggacgca-aatcgtgacac 10211193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 95; E-Value: 7e-46
Query Start/End: Original strand, 773 - 946
Target Start/End: Complemental strand, 18657017 - 18656844
Alignment:
Q  773 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtg-agctaggttgcagggtgccaaa 871  Q
    |||||||||||||||||| |||||||| |||||| |||||||| ||||||||||||||||||||||||||||||||| ||| || |||||||  ||||||    
T  18657017 cttcaaatttgtggtctgaaagaacagagaaatcatgacacgattttggcatcgtgacacgatttcgtggtgccgtgaagcaagtttgcaggacgccaaa 18656918  T
Q  872 tcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtc 946  Q
    ||||||||||||  ||||||||||||||||||||   ||||||||| |||||| ||||  |||||||||||||||    
T  18656917 tcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaag-tatcactgataaggactggtc 18656844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 95; E-Value: 7e-46
Query Start/End: Original strand, 760 - 926
Target Start/End: Original strand, 37408036 - 37408201
Alignment:
Q  760 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggttg 859  Q
    |||||||||||| ||||||||||||||| ||||||||||  ||||||||||||||| | ||||||||||||||||||| || |||||||||||| | |||    
T  37408036 tgttgagatttggcttcaaatttgtggtttggaagaacaaagaaatcgtgacacgattgtggcatcgtgacacgattttgtagtgccgtgagctggtttg 37408135  T
Q  860 cagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagtt 926  Q
    ||||||| ||||||||| ||||||||| | ||||||||||||||||| |||||||| | ||||||||    
T  37408136 cagggtgtcaaatcgtggcacgattgt-gtaaatcgtgacacgattttcaaacttgttggttaagtt 37408201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 93; E-Value: 1e-44
Query Start/End: Original strand, 777 - 977
Target Start/End: Original strand, 27352097 - 27352295
Alignment:
Q  777 aaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggttgcagggtgccaaatcgtg 876  Q
    ||||||||||||| |||||||||  |||||||||||||| ||||||||||||||||||||||  ||||||||||||| | ||||||    ||||||||||    
T  27352097 aaatttgtggtctcgaagaacagaaaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgccgtgagcttgtttgcagaacaccaaatcgtg 27352196  T
Q  877 acacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtcgtttcttgggacggacgcacaatcgtgaca 976  Q
     ||||||  ||||||||||||||||||||   ||||||||||||||| |||||  ||||||||||||||| |  ||||||||||||||| ||||||||||    
T  27352197 gcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaa-ttatcactgataaggactggtcataccttgggacggacgca-aatcgtgaca 27352294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 90; E-Value: 6e-43
Query Start/End: Original strand, 773 - 942
Target Start/End: Original strand, 28501164 - 28501332
Alignment:
Q  773 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggttgcagggtgccaaat 872  Q
    |||||||||||||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||  || |||||||||||| |||||||   ||||||    
T  28501164 cttcaaatttgtggcctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggggccgtgagctagtttgcaggacaccaaat 28501263  T
Q  873 cgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggact 942  Q
    |||| ||||||  ||| ||||||||||||||||   |||||||||||||||| ||||| |||||||||||    
T  28501264 cgtggcacgatcttggaaaatcgtgacacgattcagaaacttgctcgttaag-tatccctgataaggact 28501332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 90; E-Value: 6e-43
Query Start/End: Original strand, 773 - 942
Target Start/End: Original strand, 28503331 - 28503499
Alignment:
Q  773 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggttgcagggtgccaaat 872  Q
    |||||||||||||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||  || |||||||||||| |||| ||  |||||||    
T  28503331 cttcaaatttgtggcctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggggccgtgagctagtttgctggacgccaaat 28503430  T
Q  873 cgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggact 942  Q
    |||| ||||||  |||||||||||||||| |||   |||||||||||||||| ||||| |||||||||||    
T  28503431 cgtggcacgatcttgggaaatcgtgacacaattcagaaacttgctcgttaag-tatccctgataaggact 28503499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 88; E-Value: 1e-41
Query Start/End: Original strand, 807 - 946
Target Start/End: Original strand, 2671111 - 2671249
Alignment:
Q  807 gtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggttgcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgattt 906  Q
    ||||||||| ||||||||||||||| ||||||  ||||||||||||||| ||||||| |||||||||||| ||||||  |||||||||||||||||||||    
T  2671111 gtgacacgattttggcatcgtgacatgatttcaaggtgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattt 2671210  T
Q  907 gcaaacttgctcgttaagttatccttgataaggactggtc 946  Q
      |||||||||||||||| |||||||||||||||||||||    
T  2671211 agaaacttgctcgttaag-tatccttgataaggactggtc 2671249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 86; E-Value: 2e-40
Query Start/End: Original strand, 823 - 956
Target Start/End: Original strand, 45282628 - 45282760
Alignment:
Q  823 atcgtgacacgatttcgtggtgccgtgagctaggttgcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgtta 922  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| || |||||||||||||  || |||||||||||||||    ||||||||||||||    
T  45282628 atcgtgacacgatttcggggtgccgtgagctaggttgcagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgtta 45282727  T
Q  923 agttatccttgataaggactggtcgtttcttggg 956  Q
    || |||||||||||||||||||||||||||||||    
T  45282728 ag-tatccttgataaggactggtcgtttcttggg 45282760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 823 - 926
Target Start/End: Original strand, 27986001 - 27986104
Alignment:
Q  823 atcgtgacacgatttcgtggtgccgtgagctaggttgcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgtta 922  Q
    ||||||||||||||| ||| ||||||||||| | ||||||||||||||||||||||||||||||| | |||||||||||||||| |||||||||| ||||    
T  27986001 atcgtgacacgattttgtgatgccgtgagctggtttgcagggtgccaaatcgtgacacgattgtgtggaatcgtgacacgattttcaaacttgctggtta 27986100  T
Q  923 agtt 926  Q
    ||||    
T  27986101 agtt 27986104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 823 - 926
Target Start/End: Complemental strand, 32143884 - 32143781
Alignment:
Q  823 atcgtgacacgatttcgtggtgccgtgagctaggttgcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgtta 922  Q
    ||||||||||||||| ||| ||||||||||||| |||||||||||||||||||||||||||  || | |||||||||||||||| |||||||||||||||    
T  32143884 atcgtgacacgattttgtgatgccgtgagctagtttgcagggtgccaaatcgtgacacgatcttgtggaatcgtgacacgattttcaaacttgctcgtta 32143785  T
Q  923 agtt 926  Q
    ||||    
T  32143784 agtt 32143781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 823 - 976
Target Start/End: Original strand, 8738585 - 8738736
Alignment:
Q  823 atcgtgacacgatttcgtggtgccgtgagctaggttgcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgtta 922  Q
    ||||||||| ||||||  ||||||||||||||| |||||||  || |||||||| ||||||  ||||||||||||||||||||   ||||||||||||||    
T  8738585 atcgtgacatgatttcaaggtgccgtgagctagtttgcaggacgctaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgtta 8738684  T
Q  923 agttatccttgataaggactggtcgtttcttgggacggacgcacaatcgtgaca 976  Q
    || ||||||||||||||||||||| |  ||||| ||||||||| ||||||||||    
T  8738685 ag-tatccttgataaggactggtcataccttggaacggacgca-aatcgtgaca 8738736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 823 - 976
Target Start/End: Original strand, 9090823 - 9090974
Alignment:
Q  823 atcgtgacacgatttcgtggtgccgtgagctaggttgcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgtta 922  Q
    ||||||||| ||||||  ||||||||||||||| |||||||  || |||||||| ||||||  ||||||||||||||||||||   ||||||||||||||    
T  9090823 atcgtgacatgatttcaaggtgccgtgagctagtttgcaggacgctaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgtta 9090922  T
Q  923 agttatccttgataaggactggtcgtttcttgggacggacgcacaatcgtgaca 976  Q
    || ||||||||||||||||||||| |  ||||| ||||||||| ||||||||||    
T  9090923 ag-tatccttgataaggactggtcataccttggaacggacgca-aatcgtgaca 9090974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 53; E-Value: 8e-21
Query Start/End: Original strand, 890 - 977
Target Start/End: Complemental strand, 7782603 - 7782516
Alignment:
Q  890 aaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtcgtttcttgggacggacgca-caatcgtgacac 977  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||  ||||||||| ||| | ||||||||||||    
T  7782603 aaatcgtgacacgatttgcaaacttgctcgttaagtt-tccatgataaggactggtcgtgccttgggacgaacgtaccaatcgtgacac 7782516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 767 - 946
Target Start/End: Original strand, 2672425 - 2672603
Alignment:
Q  767 atttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgag-ctaggttgcagggt 865  Q
    ||||| ||||||||||||||||||||||||||| | ||||||| ||||| ||||  |||||||||||| |  | | ||||| ||| | || |||| ||      
T  2672425 atttggcttcaaatttgtggtctggaagaacagaggaatcgtgtcacgattttgtaatcgtgacacga-tcggagatgccgggagccaagtttgctggaa 2672523  T
Q  866 gccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtc 946  Q
    || |||||||| ||||||  ||||||||||||||||||||   ||||||||| |||||| ||||  |||||||||||||||    
T  2672524 gcaaaatcgtgccacgatcttgggaaatcgtgacacgattcagaaacttgctggttaag-tatctctgataaggactggtc 2672603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 823 - 923
Target Start/End: Original strand, 27974477 - 27974577
Alignment:
Q  823 atcgtgacacgatttcgtggtgccgtgagctaggttgcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgtta 922  Q
    ||||||||||||||| ||  ||||||||||| | |||||||||| ||||||||| ||||||||||  ||||| ||||| ||||| |||||||||| ||||    
T  27974477 atcgtgacacgattttgtaatgccgtgagctggtttgcagggtgtcaaatcgtggcacgattgtgttaaatcttgacatgattttcaaacttgctggtta 27974576  T
Q  923 a 923  Q
    |    
T  27974577 a 27974577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 759 - 815
Target Start/End: Original strand, 45282584 - 45282639
Alignment:
Q  759 ttgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacga 815  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  45282584 ttgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacga 45282639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 760 - 815
Target Start/End: Original strand, 6718288 - 6718342
Alignment:
Q  760 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacga 815  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  6718288 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacga 6718342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 773 - 917
Target Start/End: Complemental strand, 27027318 - 27027174
Alignment:
Q  773 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagc-taggttgcagggtgccaaa 871  Q
    ||||||||||||||| ||||||||||| ||||||||||||||| ||   || ||| ||||||||||   | || |||||| | | |||||| ||||  ||    
T  27027318 cttcaaatttgtggtttggaagaacagagaaatcgtgacacgatttcatcaacgtaacacgatttcccag-gcagtgagcatggtttgcagagtgctcaa 27027220  T
Q  872 tcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgct 917  Q
    ||||| ||||||| ||||||| ||||||||||||| ||||||||||    
T  27027219 tcgtgtcacgattttgggaaaacgtgacacgattttcaaacttgct 27027174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 760 - 815
Target Start/End: Complemental strand, 32143928 - 32143873
Alignment:
Q  760 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacga 815  Q
    |||||||||||| |||||||||||||||||| |||||||| |||||||||||||||    
T  32143928 tgttgagatttggcttcaaatttgtggtctgaaagaacagagaaatcgtgacacga 32143873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 770 - 915
Target Start/End: Original strand, 40734084 - 40734228
Alignment:
Q  770 tgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagc-taggttgcagggtgcc 868  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||| ||   || | || |||||||||     || |||||| | | |||||||||||     
T  40734084 tgtcttcaaatttgtggtttggaagaacagagaaatcgtgacacgatttcatcaacatgtcacgatttc--caagcagtgagcatggtttgcagggtgct 40734181  T
Q  869 aaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttg 915  Q
     ||||||| ||||||| ||||||| ||||||||||||| ||||||||    
T  40734182 caatcgtgtcacgattttgggaaaacgtgacacgattttcaaacttg 40734228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 770 - 917
Target Start/End: Original strand, 40735015 - 40735161
Alignment:
Q  770 tgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggtt-gcagggtgcc 868  Q
    |||||||||||||||||| |||| ||||||  |||||||||||||| ||   || |||| |||||||||   |  | ||||||  |||| |||||||||     
T  40735015 tgtcttcaaatttgtggtttggatgaacagataaatcgtgacacgatttcatcaacgtgtcacgatttccaag--cagtgagcatggtttgcagggtgct 40735112  T
Q  869 aaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgct 917  Q
     ||||||| ||||||| ||||||| ||||||||||||| ||||||||||    
T  40735113 caatcgtgtcacgattttgggaaaacgtgacacgattttcaaacttgct 40735161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 767 - 946
Target Start/End: Original strand, 2676581 - 2676759
Alignment:
Q  767 atttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggtt-gcagggt 865  Q
    ||||| ||||||||||||||||||||||||||| | ||||||| ||||| ||||  |||||||||||||   | | || || |||| | ||| || ||      
T  2676581 atttggcttcaaatttgtggtctggaagaacagaggaatcgtgtcacgattttgtaatcgtgacacgatcg-gagatgtcgggagccaagtttgctggaa 2676679  T
Q  866 gccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtc 946  Q
    || |||||||| ||||||  ||||||||||||||||||||   ||||||||| ||||||  |||  |||||||||||||||    
T  2676680 gcaaaatcgtgccacgatcttgggaaatcgtgacacgattcagaaacttgctggttaag-aatctctgataaggactggtc 2676759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 760 - 820
Target Start/End: Original strand, 27974433 - 27974493
Alignment:
Q  760 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttg 820  Q
    |||||| ||||| ||||||||||||||| ||||||||||| ||||||||||||||| ||||    
T  27974433 tgttgaaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttg 27974493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 758 - 915
Target Start/End: Complemental strand, 27038668 - 27038511
Alignment:
Q  758 tttgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagc-tagg 856  Q
    |||||||| | ||| |||||| |||||||| ||||| ||||| ||||||||||||||| ||   || ||||||||||||||   | || |||||| | |     
T  27038668 tttgttgaaaattggcttcaagtttgtggtttggaaaaacagagaaatcgtgacacgatttcatcaacgtgacacgatttcccag-gcagtgagcatggt 27038570  T
Q  857 ttgcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttg 915  Q
    |||||||||||  |||| || ||||||| |||||||  |||||||||||| ||||||||    
T  27038569 ttgcagggtgctcaatcatgtcacgattttgggaaaatgtgacacgattttcaaacttg 27038511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 773 - 917
Target Start/End: Complemental strand, 36029704 - 36029561
Alignment:
Q  773 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagc-taggttgcagggtgccaaa 871  Q
    ||||||||||||||| ||||||||||| ||||||||||||||| |||  || |||| ||||||||  |   || | || | | | |||||||||||  ||    
T  36029704 cttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttatcaacgtgtcacgattt--tcaggcagcgaacatggtttgcagggtgcttaa 36029607  T
Q  872 tcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgct 917  Q
    ||||| ||||||| ||| ||| ||||||||||||| ||||||||||    
T  36029606 tcgtgtcacgattttggaaaaacgtgacacgattttcaaacttgct 36029561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 773 - 917
Target Start/End: Complemental strand, 21711813 - 21711669
Alignment:
Q  773 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagc-taggttgcagggtgccaaa 871  Q
    ||||||||||||||| ||||||||||| ||||||||||||||| ||   || |||| ||||||||    | || |||||| | | || ||||||||  ||    
T  21711813 cttcaaatttgtggtttggaagaacagagaaatcgtgacacgatttcttcaacgtgtcacgattttccag-gcagtgagcatggttttcagggtgctcaa 21711715  T
Q  872 tcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgct 917  Q
    ||||| ||||||| ||||||| |||||||| |||| ||||||||||    
T  21711714 tcgtgtcacgattttgggaaaacgtgacacaattttcaaacttgct 21711669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 869 - 946
Target Start/End: Complemental strand, 32475963 - 32475887
Alignment:
Q  869 aaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtc 946  Q
    |||||||||||||||  ||||||||||||||||||||   ||||||||| |||||| ||||  |||||||||||||||    
T  32475963 aaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaag-tatctctgataaggactggtc 32475887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 869 - 946
Target Start/End: Complemental strand, 32480821 - 32480745
Alignment:
Q  869 aaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtc 946  Q
    |||||||||||||||  ||||||||||||||||||||   ||||||||| |||||| ||||  |||||||||||||||    
T  32480821 aaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaag-tatctctgataaggactggtc 32480745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 760 - 815
Target Start/End: Original strand, 27985957 - 27986012
Alignment:
Q  760 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacga 815  Q
    ||||||||||||  |||||||||||||| ||||| ||||| |||||||||||||||    
T  27985957 tgttgagatttgatttcaaatttgtggtttggaataacagagaaatcgtgacacga 27986012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 760 - 815
Target Start/End: Complemental strand, 40845279 - 40845224
Alignment:
Q  760 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacga 815  Q
    ||||||||||||||||||||||| || | ||| ||||||| |||||||||||||||    
T  40845279 tgttgagatttgtcttcaaatttatgttttgggagaacagagaaatcgtgacacga 40845224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 773 - 815
Target Start/End: Complemental strand, 16264941 - 16264899
Alignment:
Q  773 cttcaaatttgtggtctggaagaacagggaaatcgtgacacga 815  Q
    ||||||||||||||| ||||||||||| |||||||||||||||    
T  16264941 cttcaaatttgtggtttggaagaacagcgaaatcgtgacacga 16264899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 773 - 815
Target Start/End: Original strand, 30709271 - 30709313
Alignment:
Q  773 cttcaaatttgtggtctggaagaacagggaaatcgtgacacga 815  Q
    ||||||||||||||| ||||||||||| |||||||||||||||    
T  30709271 cttcaaatttgtggtttggaagaacagagaaatcgtgacacga 30709313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 869 - 946
Target Start/End: Complemental strand, 8512719 - 8512643
Alignment:
Q  869 aaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtc 946  Q
    |||||||| ||||||  ||||||||||||||||||||   ||||||||| |||||| ||||  |||||||||||||||    
T  8512719 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaag-tatctctgataaggactggtc 8512643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 869 - 946
Target Start/End: Complemental strand, 8517599 - 8517523
Alignment:
Q  869 aaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtc 946  Q
    |||||||| ||||||  ||||||||||||||||||||   ||||||||| |||||| ||||  |||||||||||||||    
T  8517599 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaag-tatctctgataaggactggtc 8517523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 869 - 946
Target Start/End: Complemental strand, 24968596 - 24968520
Alignment:
Q  869 aaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtc 946  Q
    |||||||| ||||||  ||||||||||||||||||||   ||||||||| |||||||| ||  |||||||||||||||    
T  24968596 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtt-tctctgataaggactggtc 24968520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 857 - 906
Target Start/End: Original strand, 29812737 - 29812786
Alignment:
Q  857 ttgcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgattt 906  Q
    |||||||||| | ||||||||||||||| ||||||| |||||||||||||    
T  29812737 ttgcagggtgtccaatcgtgacacgattttgggaaaacgtgacacgattt 29812786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 870 - 906
Target Start/End: Original strand, 3393293 - 3393329
Alignment:
Q  870 aatcgtgacacgattgtgggaaatcgtgacacgattt 906  Q
    ||||||||||||||| |||||||||||||||||||||    
T  3393293 aatcgtgacacgattttgggaaatcgtgacacgattt 3393329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 870 - 906
Target Start/End: Complemental strand, 5258626 - 5258590
Alignment:
Q  870 aatcgtgacacgattgtgggaaatcgtgacacgattt 906  Q
    ||||||||||||||| |||||||||||||||||||||    
T  5258626 aatcgtgacacgattttgggaaatcgtgacacgattt 5258590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 857 - 917
Target Start/End: Original strand, 8370048 - 8370108
Alignment:
Q  857 ttgcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgct 917  Q
    |||||||||||  ||||||| ||||||| ||||||| ||||||||||||| |||| |||||    
T  8370048 ttgcagggtgctcaatcgtgtcacgattttgggaaaacgtgacacgattttcaaaattgct 8370108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 857 - 913
Target Start/End: Complemental strand, 16264876 - 16264820
Alignment:
Q  857 ttgcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaact 913  Q
    |||||||||||  ||||||| ||||||| ||||||| ||||||||||||| ||||||    
T  16264876 ttgcagggtgctcaatcgtgtcacgattttgggaaaacgtgacacgattttcaaact 16264820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 760 - 815
Target Start/End: Original strand, 39032017 - 39032072
Alignment:
Q  760 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacga 815  Q
    |||||| | ||| |||||||||||| || ||||||||||| |||||||||||||||    
T  39032017 tgttgaaaattggcttcaaatttgttgtttggaagaacagagaaatcgtgacacga 39032072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 773 - 811
Target Start/End: Original strand, 1730921 - 1730959
Alignment:
Q  773 cttcaaatttgtggtctggaagaacagggaaatcgtgac 811  Q
    ||||||||||||||| ||||||||||| |||||||||||    
T  1730921 cttcaaatttgtggtttggaagaacagagaaatcgtgac 1730959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 773 - 835
Target Start/End: Complemental strand, 32476059 - 32475997
Alignment:
Q  773 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgat 835  Q
    ||||||||||||||| ||| ||||||| | ||||||| ||||| || | ||||||||||||||    
T  32476059 cttcaaatttgtggtttgggagaacagaggaatcgtgtcacgatttggccatcgtgacacgat 32475997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 773 - 835
Target Start/End: Complemental strand, 32480917 - 32480855
Alignment:
Q  773 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgat 835  Q
    ||||||||||||||| ||| ||||||| | ||||||| ||||| || | ||||||||||||||    
T  32480917 cttcaaatttgtggtttgggagaacagaggaatcgtgtcacgatttggccatcgtgacacgat 32480855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 857 - 906
Target Start/End: Complemental strand, 6096312 - 6096263
Alignment:
Q  857 ttgcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgattt 906  Q
    |||||||||| | ||| ||||||||||| ||||||| |||||||||||||    
T  6096312 ttgcagggtgtccaattgtgacacgattttgggaaaacgtgacacgattt 6096263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 860 - 917
Target Start/End: Original strand, 39032117 - 39032174
Alignment:
Q  860 cagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgct 917  Q
    ||||||||  ||||||| ||||||| |||||||  |||||||||||| ||||||||||    
T  39032117 cagggtgctcaatcgtgtcacgattttgggaaaatgtgacacgattttcaaacttgct 39032174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 857 - 906
Target Start/End: Complemental strand, 44331941 - 44331892
Alignment:
Q  857 ttgcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgattt 906  Q
    |||||||||| | ||||||||||||||| ||| ||| |||||||||||||    
T  44331941 ttgcagggtgtccaatcgtgacacgattttggaaaaacgtgacacgattt 44331892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 164; Significance: 4e-87; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 164; E-Value: 4e-87
Query Start/End: Original strand, 760 - 977
Target Start/End: Original strand, 40281958 - 40282176
Alignment:
Q  760 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggttg 859  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  40281958 tgttgagatttgtcttcaaatttgtggtctggaagaatagggaaatcgtgacacgaatttggcatcgtgacacgatttagtggtgccgtgagctaggttg 40282057  T
Q  860 cagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatt-tgcaaacttgctcgttaagttatccttgataaggactggtcgtttcttgggac 958  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| ||| ||||||||||||||| |  ||||||||    
T  40282058 cagggtgccaaatcgtgacacgattgtggtaaatcgtgacacgattgtgcaaacttgctcgttaagtt-tccatgataaggactggtcataccttgggac 40282156  T
Q  959 ggacgca-caatcgtgacac 977  Q
    ||| ||| ||||||||||||    
T  40282157 ggatgcaccaatcgtgacac 40282176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 159; E-Value: 4e-84
Query Start/End: Original strand, 760 - 946
Target Start/End: Complemental strand, 20622821 - 20622636
Alignment:
Q  760 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggttg 859  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||    
T  20622821 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctagtctg 20622722  T
Q  860 cagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtc 946  Q
    ||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||| |||||||||||||||||||||    
T  20622721 cagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgattgtgaaacttgctcgttaag-tatccttgataaggactggtc 20622636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 151; E-Value: 2e-79
Query Start/End: Original strand, 760 - 977
Target Start/End: Original strand, 9986785 - 9987002
Alignment:
Q  760 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggttg 859  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| |  ||    
T  9986785 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttgacatcgtaacacgatttcgtggtgccgtgagctggtctg 9986884  T
Q  860 cagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtcgtttcttgggacg 959  Q
    ||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| | ||||||||||||| |  |||||||||    
T  9986885 cagtgtgccaaatcgtgacacgattttgggaaatcgtgacacgatttgcaaacttgctcgttaagtt-tccataataaggactggtcataccttgggacg 9986983  T
Q  960 gacgca-caatcgtgacac 977  Q
    || ||| ||||||||||||    
T  9986984 gatgcaccaatcgtgacac 9987002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 148; E-Value: 2e-77
Query Start/End: Original strand, 760 - 977
Target Start/End: Original strand, 21053540 - 21053757
Alignment:
Q  760 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggttg 859  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||  ||    
T  21053540 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgcagtgagctagaatg 21053638  T
Q  860 cagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatt-tgcaaacttgctcgttaagttatccttgataaggactggtcgtttcttgggac 958  Q
    || ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| ||||||||||||||| |  |||| |||    
T  21053639 caaggtgccaaatcgtgacacgattgtgggaaatcgtgacacgattgtgcaaacttgctcgttaagtt-tccatgataaggactggtcataccttgagac 21053737  T
Q  959 ggacgca-caatcgtgacac 977  Q
    ||| ||| ||||||||||||    
T  21053738 ggatgcaccaatcgtgacac 21053757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 132; E-Value: 5e-68
Query Start/End: Original strand, 759 - 946
Target Start/End: Original strand, 51764989 - 51765175
Alignment:
Q  759 ttgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggtt 858  Q
    ||||||||||||| ||| ||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| ||||||||||| | ||    
T  51764989 ttgttgagatttggctttaaatttgtggtctggaagaacagagaaatcgtgacacgaatttgacatcgtgacacgatttcgtgatgccgtgagctggttt 51765088  T
Q  859 gcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtc 946  Q
    |||||||||||||||||||||||||  || | |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||    
T  51765089 gcagggtgccaaatcgtgacacgatcttgaggaatcgtgacacgatttgcaaacttgctcgttaagtt-tccatgataaggactggtc 51765175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 127; E-Value: 5e-65
Query Start/End: Original strand, 760 - 977
Target Start/End: Original strand, 19360912 - 19361129
Alignment:
Q  760 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggttg 859  Q
    |||||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||| ||| ||||||||||| | |||    
T  19360912 tgttgagatttggcttcaaatttgtggtctgaaagaacagagaaatcgtgacacgaatttggtatcgtgacacgattttgtgatgccgtgagctggtttg 19361011  T
Q  860 cagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtcgtttcttgggacg 959  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||||||||||| |||  ||||||||| ||||||  |||| ||||    
T  19361012 cagggtgccaaatcgtgacacgatcttgggaaatcgtgacacgattttcaaacttgctcgttaagtt-tccaggataaggacaggtcgtaccttgtgacg 19361110  T
Q  960 gacgca-caatcgtgacac 977  Q
     ||| | ||||||||||||    
T  19361111 tacgtaccaatcgtgacac 19361129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 125; E-Value: 8e-64
Query Start/End: Original strand, 760 - 956
Target Start/End: Original strand, 9036003 - 9036197
Alignment:
Q  760 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggttg 859  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||||||||||    
T  9036003 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggttg 9036101  T
Q  860 cagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtcgtttcttggg 956  Q
    |||||||| || ||||| ||| ||| ||  |||||||||||||||    |||||||||||||||| |||||||||||||||||||||||||||||||    
T  9036102 cagggtgcaaattcgtgtcactattttgttaaatcgtgacacgatcgtgaaacttgctcgttaag-tatccttgataaggactggtcgtttcttggg 9036197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 125; E-Value: 8e-64
Query Start/End: Original strand, 760 - 948
Target Start/End: Original strand, 19365768 - 19365955
Alignment:
Q  760 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggttg 859  Q
    |||||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| ||| ||||||||||| | |||    
T  19365768 tgttgagatttgacttcaaatttgtggtctgaaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgatgccgtgagctggtttg 19365867  T
Q  860 cagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtcgt 948  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||| |||||||||||||||| || |||  ||||||||| ||||||    
T  19365868 cagggtgccaaatcgtgacacgatcttgggaaatcgtgacacgattttcaaacttgctcgttaa-ttttccaggataaggacaggtcgt 19365955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 119; E-Value: 3e-60
Query Start/End: Original strand, 756 - 977
Target Start/End: Original strand, 44203214 - 44203432
Alignment:
Q  756 tttttgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagcta- 854  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| || | ||||||||||||||     
T  44203214 tttttgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggaatcgtgacacga-ttggaggtgccgtgagctag 44203311  T
Q  855 ggttgcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtcgtttcttg 954  Q
    ||||||||||   ||||||||| |||||||  || |||||||||||||||    |||||||||||||||| |||||||||||||||||||||||| ||||    
T  44203312 ggttgcaggggtgcaaatcgtggcacgatttgggaaaatcgtgacacgatccagaaacttgctcgttaag-tatccttgataaggactggtcgttccttg 44203410  T
Q  955 ggacggacgcacaatcgtgacac 977  Q
    ||||||||||| |||||||||||    
T  44203411 ggacggacgca-aatcgtgacac 44203432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 105; E-Value: 7e-52
Query Start/End: Original strand, 760 - 884
Target Start/End: Original strand, 24202251 - 24202375
Alignment:
Q  760 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggttg 859  Q
    |||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| | |||    
T  24202251 tgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagctggtttg 24202350  T
Q  860 cagggtgccaaatcgtgacacgatt 884  Q
    |||||||||||||||||||||||||    
T  24202351 cagggtgccaaatcgtgacacgatt 24202375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 91; E-Value: 2e-43
Query Start/End: Original strand, 760 - 926
Target Start/End: Original strand, 13604095 - 13604261
Alignment:
Q  760 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggttg 859  Q
    |||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| | ||| |||||| |||||||| ||| || |||||||| | |||    
T  13604095 tgttgagatttgtcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattgtggtatcgtggcacgattttgtgatgtcgtgagctggtttg 13604194  T
Q  860 cagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagtt 926  Q
    ||| ||| ||||||||||||||||| || | |||||||||| ||||| |||||||||| ||||||||    
T  13604195 cagtgtgtcaaatcgtgacacgattttgtggaatcgtgacatgattttcaaacttgctggttaagtt 13604261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 83; E-Value: 9e-39
Query Start/End: Original strand, 768 - 946
Target Start/End: Complemental strand, 41391178 - 41391002
Alignment:
Q  768 tttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggttgcagggtgc 867  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||| | | |||||||||| || |||||||  ||    
T  41391178 tttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacacgattt-gagatgccgtgagccagtttgcaggacgc 41391080  T
Q  868 caaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtc 946  Q
    ||||||||| ||||||  ||||||||||||||| ||||   |||||||||| ||||| ||||  |||||||||||||||    
T  41391079 caaatcgtggcacgatcttgggaaatcgtgacatgattcagaaacttgctcattaag-tatcactgataaggactggtc 41391002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 823 - 946
Target Start/End: Original strand, 24793709 - 24793831
Alignment:
Q  823 atcgtgacacgatttcgtggtgccgtgagctaggttgcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgtta 922  Q
    ||||||||||||||||| ||||||||||||||| |||||||  ||||||||||| ||||||  ||||||||||||||||||||   ||||||||||||||    
T  24793709 atcgtgacacgatttcgaggtgccgtgagctagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgtta 24793808  T
Q  923 agttatccttgataaggactggtc 946  Q
    || |||||||||||||||||||||    
T  24793809 ag-tatccttgataaggactggtc 24793831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 75; E-Value: 6e-34
Query Start/End: Original strand, 773 - 946
Target Start/End: Complemental strand, 39446070 - 39445898
Alignment:
Q  773 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgag-ctaggttgcagggtgccaaa 871  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||| | | ||||||||| | || |||||||  ||||||    
T  39446070 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacacgattt-gagatgccgtgagccaagtttgcaggacgccaaa 39445972  T
Q  872 tcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtc 946  Q
    ||||| ||||||  ||||||||| |||||||||    |||||||||||||||| ||||  |||||||||||||||    
T  39445971 tcgtggcacgatcttgggaaatcatgacacgatccagaaacttgctcgttaag-tatcactgataaggactggtc 39445898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 75; E-Value: 6e-34
Query Start/End: Original strand, 773 - 946
Target Start/End: Original strand, 44023389 - 44023561
Alignment:
Q  773 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgag-ctaggttgcagggtgccaaa 871  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||| |||||||||||| || | ||||||||||| | || |||| || ||| |||    
T  44023389 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacacga-ttggaggtgccgtgagccaagtttgctggatgcaaaa 44023487  T
Q  872 tcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtc 946  Q
    ||||| ||||||  ||||||||||||||||||||   ||||||||| |||||| ||||  |||||||||||||||    
T  44023488 tcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaag-tatcactgataaggactggtc 44023561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 773 - 946
Target Start/End: Original strand, 1054526 - 1054698
Alignment:
Q  773 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgag-ctaggttgcagggtgccaaa 871  Q
    ||||||||||||||||||||||||||| ||||||||| ||||| ||||| ||||||| |||| || | ||||||||||| | || |||||||  ||||||    
T  1054526 cttcaaatttgtggtctggaagaacagagaaatcgtgtcacgattttggaatcgtgatacga-ttggaggtgccgtgagccaagtttgcaggacgccaaa 1054624  T
Q  872 tcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtc 946  Q
    ||||| ||||||  ||||||||||||||||||||   ||||||||| |||||| ||||  |||||||||||||||    
T  1054625 tcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctagttaag-tatcactgataaggactggtc 1054698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 773 - 946
Target Start/End: Original strand, 25439411 - 25439583
Alignment:
Q  773 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgag-ctaggttgcagggtgccaaa 871  Q
    ||||||||||||||||||||||||||| | ||||||||||||| || |  ||||||||||||||| | | ||||||||| | || ||||||| ||| |||    
T  25439411 cttcaaatttgtggtctggaagaacagagcaatcgtgacacgatttggtaatcgtgacacgattt-gagatgccgtgagccaagtttgcaggatgcaaaa 25439509  T
Q  872 tcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtc 946  Q
    ||||| ||||||  |||||||||||||||||||    ||||||||| |||||| ||||  |||||||||||||||    
T  25439510 tcgtggcacgatcttgggaaatcgtgacacgatccagaaacttgctggttaag-tatctctgataaggactggtc 25439583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 841 - 946
Target Start/End: Original strand, 24786905 - 24787009
Alignment:
Q  841 ggtgccgtgagctaggttgcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataagga 940  Q
    ||||||||||||||| |||||||  ||||||||||| ||||||  ||||||||||||||||||||   |||||||||||||||| |||||||||||||||    
T  24786905 ggtgccgtgagctagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaag-tatccttgataagga 24787003  T
Q  941 ctggtc 946  Q
    ||||||    
T  24787004 ctggtc 24787009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 773 - 946
Target Start/End: Original strand, 25444604 - 25444776
Alignment:
Q  773 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgag-ctaggttgcagggtgccaaa 871  Q
    ||||||||||||||||||||||||||| | ||||||||||||| || |  ||||||||||||||| | | ||||||||| | || ||| ||| ||| |||    
T  25444604 cttcaaatttgtggtctggaagaacagagcaatcgtgacacgatttggtaatcgtgacacgattt-gagatgccgtgagccaagtttgtaggatgcaaaa 25444702  T
Q  872 tcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtc 946  Q
    ||||| ||||||  |||||||||||||||||||    ||||||| | |||||| ||||  |||||||||||||||    
T  25444703 tcgtggcacgatcttgggaaatcgtgacacgatccagaaacttgttggttaag-tatctctgataaggactggtc 25444776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 777 - 915
Target Start/End: Original strand, 26644390 - 26644528
Alignment:
Q  777 aaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggttgcagggtgccaaatcgtg 876  Q
    ||||||||||| ||||||||||| | |||||||| |||| |||| |||||| ||||||||| ||  || | |||||| | ||||| |||| |||||||||    
T  26644390 aaatttgtggtttggaagaacagaggaatcgtgatacgattttgtcatcgtaacacgattttgtaatgtcatgagctggtttgcacggtgtcaaatcgtg 26644489  T
Q  877 acacgattgtgggaaatcgtgacacgatttgcaaacttg 915  Q
     ||||||| || |||| ||||||||||||| ||||||||    
T  26644490 gcacgattttgtgaaaacgtgacacgattttcaaacttg 26644528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 823 - 946
Target Start/End: Complemental strand, 41398778 - 41398657
Alignment:
Q  823 atcgtgacacgatttcgtggtgccgtgagctaggttgcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgtta 922  Q
    ||||||||||||||| | | |||||||||| || |||||||  ||||||||||| ||||||  ||||||||||||||||||||   |||||||||| |||    
T  41398778 atcgtgacacgattt-gagatgccgtgagccagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcatta 41398680  T
Q  923 agttatccttgataaggactggtc 946  Q
    || |||| ||||||||||||||||    
T  41398679 ag-tatcattgataaggactggtc 41398657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 660 - 734
Target Start/End: Complemental strand, 37888616 - 37888542
Alignment:
Q  660 cctttccccgttcccttctctttatcttcactcctttgcatattctttaaaaatcagtatttttcaatacaagaa 734  Q
    ||||||||| |||||||||| ||| ||||||||||||| |||||||| |||||||| |||||||| |||||||||    
T  37888616 cctttccccattcccttctccttaccttcactcctttggatattcttcaaaaatcaatatttttccatacaagaa 37888542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 757 - 837
Target Start/End: Original strand, 21536109 - 21536189
Alignment:
Q  757 ttttgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgattt 837  Q
    ||||||||  ||||| ||||||||||||||| ||||||||||| ||||||||||||||| ||   || |||||||||||||    
T  21536109 ttttgttgtaatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgatttcatcaacgtgacacgattt 21536189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 773 - 815
Target Start/End: Original strand, 24793678 - 24793720
Alignment:
Q  773 cttcaaatttgtggtctggaagaacagggaaatcgtgacacga 815  Q
    ||||||||||||||||||||||||||| |||||||||||||||    
T  24793678 cttcaaatttgtggtctggaagaacagagaaatcgtgacacga 24793720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 857 - 906
Target Start/End: Complemental strand, 28220721 - 28220672
Alignment:
Q  857 ttgcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgattt 906  Q
    |||||||||||| ||||||||||||||| ||||||| |||||||||||||    
T  28220721 ttgcagggtgcccaatcgtgacacgattttgggaaaacgtgacacgattt 28220672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 857 - 906
Target Start/End: Complemental strand, 28223916 - 28223867
Alignment:
Q  857 ttgcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgattt 906  Q
    |||||||||||| ||||||||||||||| ||||||| |||||||||||||    
T  28223916 ttgcagggtgcccaatcgtgacacgattttgggaaaacgtgacacgattt 28223867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 908 - 959
Target Start/End: Original strand, 24202378 - 24202428
Alignment:
Q  908 caaacttgctcgttaagttatccttgataaggactggtcgtttcttgggacg 959  Q
    ||||||||||||||||| ||||||||||||||||||||| | ||||||||||    
T  24202378 caaacttgctcgttaag-tatccttgataaggactggtcatatcttgggacg 24202428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 768 - 815
Target Start/End: Complemental strand, 41398814 - 41398767
Alignment:
Q  768 tttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacga 815  Q
    |||| |||||||||||||||||| |||||||| |||||||||||||||    
T  41398814 tttggcttcaaatttgtggtctgaaagaacagagaaatcgtgacacga 41398767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 773 - 815
Target Start/End: Complemental strand, 13599012 - 13598970
Alignment:
Q  773 cttcaaatttgtggtctggaagaacagggaaatcgtgacacga 815  Q
    ||||||||||||||| ||||||||||| |||||||||||||||    
T  13599012 cttcaaatttgtggtttggaagaacagagaaatcgtgacacga 13598970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 753 - 815
Target Start/End: Complemental strand, 37070399 - 37070337
Alignment:
Q  753 ttctttttgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacga 815  Q
    |||||| |||||| | |||  |||||||||||||| ||||||||||| |||||||||||||||    
T  37070399 ttctttgtgttgaaaattggtttcaaatttgtggtttggaagaacagagaaatcgtgacacga 37070337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 857 - 906
Target Start/End: Original strand, 3156541 - 3156590
Alignment:
Q  857 ttgcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgattt 906  Q
    |||||||||||||||||||||||||||| ||||||| | | |||||||||    
T  3156541 ttgcagggtgccaaatcgtgacacgattttgggaaaacataacacgattt 3156590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 857 - 906
Target Start/End: Original strand, 31658912 - 31658961
Alignment:
Q  857 ttgcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgattt 906  Q
    |||||||||||| ||||||||||||||| ||||||| |||||||| ||||    
T  31658912 ttgcagggtgcccaatcgtgacacgattttgggaaaacgtgacacaattt 31658961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 293
Target Start/End: Original strand, 37882626 - 37882675
Alignment:
Q  244 tgcggatttttcagtaattttgaaaaacaatgtaattgcaaatattgctg 293  Q
    ||||||||||||| ||||||||||||| ||||||||||||| || |||||    
T  37882626 tgcggatttttcaataattttgaaaaagaatgtaattgcaagtactgctg 37882675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 759 - 815
Target Start/End: Complemental strand, 3282332 - 3282276
Alignment:
Q  759 ttgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacga 815  Q
    ||||||| ||||| |||||||||||||||  ||||||||||  ||||||||||||||    
T  3282332 ttgttgaaatttggcttcaaatttgtggttaggaagaacagaaaaatcgtgacacga 3282276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 870 - 906
Target Start/End: Original strand, 20762358 - 20762394
Alignment:
Q  870 aatcgtgacacgattgtgggaaatcgtgacacgattt 906  Q
    ||||||||||||||| |||||||||||||||||||||    
T  20762358 aatcgtgacacgattttgggaaatcgtgacacgattt 20762394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 870 - 915
Target Start/End: Complemental strand, 37070282 - 37070237
Alignment:
Q  870 aatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttg 915  Q
    ||||||| ||||||| ||||||| ||||||||||||| ||||||||    
T  37070282 aatcgtgtcacgattttgggaaaacgtgacacgattttcaaacttg 37070237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 869 - 946
Target Start/End: Original strand, 43988057 - 43988133
Alignment:
Q  869 aaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtc 946  Q
    |||||||| ||||||  ||| ||||||||||||||||   ||||||||| |||||| ||||  |||||||||||||||    
T  43988057 aaatcgtgccacgatcttggtaaatcgtgacacgattcagaaacttgctggttaag-tatctctgataaggactggtc 43988133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 857 - 906
Target Start/End: Original strand, 49918023 - 49918072
Alignment:
Q  857 ttgcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgattt 906  Q
    |||||||||||| ||||||||||||||| | | ||| |||||||||||||    
T  49918023 ttgcagggtgcccaatcgtgacacgattttcgaaaaacgtgacacgattt 49918072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 163; Significance: 2e-86; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 163; E-Value: 2e-86
Query Start/End: Original strand, 760 - 977
Target Start/End: Original strand, 6266274 - 6266491
Alignment:
Q  760 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggttg 859  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |||||||| ||||||||||| | |||    
T  6266274 tgttgagatttgtcttcaaatttgtggtctggaagaacatggaaatcgtgacacgaatttgacatcgtgacacaatttcgtgatgccgtgagctggtttg 6266373  T
Q  860 cagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtcgtttcttgggacg 959  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||| ||||||||||||||||||    
T  6266374 cagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttactcgttaagtt-tccatgataaggaatggtcgtttcttgggacg 6266472  T
Q  960 gacgca-caatcgtgacac 977  Q
     ||||| ||||||||||||    
T  6266473 aacgcaccaatcgtgacac 6266491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 137; E-Value: 6e-71
Query Start/End: Original strand, 758 - 977
Target Start/End: Complemental strand, 4484925 - 4484706
Alignment:
Q  758 tttgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggt 857  Q
    |||||||||||||  ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| || ||||||||||||| |    
T  4484925 tttgttgagattttacttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgatttcatgatgccgtgagctagtt 4484826  T
Q  858 tgcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtcgtttcttggga 957  Q
    ||||||||||||||||||||||||||  |  | |||||||||||||||||||||||||||||||||||| ||  |||||||||||||||||  |||||||    
T  4484825 tgcagggtgccaaatcgtgacacgatcttaaggaatcgtgacacgatttgcaaacttgctcgttaagtt-tctatgataaggactggtcgtaccttggga 4484727  T
Q  958 cggacgca-caatcgtgacac 977  Q
    || ||| | ||||||||||||    
T  4484726 cgtacgtaccaatcgtgacac 4484706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 137; E-Value: 6e-71
Query Start/End: Original strand, 758 - 977
Target Start/End: Complemental strand, 25410268 - 25410049
Alignment:
Q  758 tttgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggt 857  Q
    ||||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| ||||||||| | | |    
T  25410268 tttgttgagttttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgatgccgtgagatggtt 25410169  T
Q  858 tgcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtcgtttcttggga 957  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| |||||||  |||| ||    
T  25410168 tgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacgattttcaaacttgctcgttaag-tatccttgataaggaatggtcgtaccttgtga 25410070  T
Q  958 cggacgca-caatcgtgacac 977  Q
    || ||| | ||||||||||||    
T  25410069 cgtacgtaccaatcgtgacac 25410049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 135; E-Value: 9e-70
Query Start/End: Original strand, 760 - 977
Target Start/End: Original strand, 32289148 - 32289365
Alignment:
Q  760 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggttg 859  Q
    |||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| ||||||||||| | |||    
T  32289148 tgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgatgccgtgagctggtttg 32289247  T
Q  860 cagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtcgtttcttgggacg 959  Q
    |||||||||||||| |||||||||  || | ||||||||||||||||| |||||||||||||||||| ||| |||||||||||||||||  |||||||||    
T  32289248 cagggtgccaaatcttgacacgatcttgaggaatcgtgacacgatttgaaaacttgctcgttaagtt-tccatgataaggactggtcgtaccttgggacg 32289346  T
Q  960 gacgc-acaatcgtgacac 977  Q
     ||||  ||||||||||||    
T  32289347 tacgctccaatcgtgacac 32289365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 132; E-Value: 5e-68
Query Start/End: Original strand, 759 - 977
Target Start/End: Complemental strand, 12647968 - 12647753
Alignment:
Q  759 ttgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagcta-ggt 857  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| | |||||||||||| |||    
T  12647968 ttgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttgggatcgtgacacgatttcg-gatgccgtgagctagggt 12647871  T
Q  858 tgcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtcgtttcttggga 957  Q
    |||||||   ||||||||| |||||||||||||||||||||||||||    |||||||||||||||| |||||||||||||||||||||||| |||||||    
T  12647870 tgcaggggtgcaaatcgtggcacgattgtgggaaatcgtgacacgatccataaacttgctcgttaag-tatccttgataaggactggtcgttccttggga 12647772  T
Q  958 cggacgcacaatcgtgacac 977  Q
    |||||||| |||||||||||    
T  12647771 cggacgca-aatcgtgacac 12647753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 131; E-Value: 2e-67
Query Start/End: Original strand, 760 - 977
Target Start/End: Original strand, 30832921 - 30833138
Alignment:
Q  760 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggttg 859  Q
    |||||||||||| ||||||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||||||||||| ||||||||||| | |||    
T  30832921 tgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacatgaatttgacatcgtgacacgatttcgtgatgccgtgagctggtttg 30833020  T
Q  860 cagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtcgtttcttgggacg 959  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||||||||||| |||  ||||||||| ||||||  |||| ||||    
T  30833021 cagggtgccaaatcgtgacacgatcttgggaaatcgtgacacgattttcaaacttgctcgttaagtt-tccaggataaggacaggtcgtaccttgtgacg 30833119  T
Q  960 gacgca-caatcgtgacac 977  Q
     ||| | ||||||||||||    
T  30833120 tacgtaccaatcgtgacac 30833138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 123; E-Value: 1e-62
Query Start/End: Original strand, 756 - 977
Target Start/End: Complemental strand, 3492381 - 3492160
Alignment:
Q  756 tttttgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctag 855  Q
    |||||||||||||||| |||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||||||||| ||| ||||||||||| |    
T  3492381 tttttgttgagatttggcttcaaatttgtggtctgaaagaacagagaaattgtgacacgaatttggcatcgtgacacgattttgtgatgccgtgagctgg 3492282  T
Q  856 gttgcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtcgtttcttgg 955  Q
     |||||||||||||||||||||||||||  ||||||||||||||||||||   |||||||||||||||||| |||  ||||||||| ||||||  ||||     
T  3492281 tttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacgattctgaaacttgctcgttaagtt-tccaggataaggacaggtcgtaccttgt 3492183  T
Q  956 gacggacgca-caatcgtgacac 977  Q
    |||| ||| | ||||||||||||    
T  3492182 gacgtacgtaccaatcgtgacac 3492160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 121; E-Value: 2e-61
Query Start/End: Original strand, 773 - 977
Target Start/End: Original strand, 9295874 - 9296076
Alignment:
Q  773 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggttgcagggtgccaaat 872  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||  ||||||||||||||| ||||||| ||||||||    
T  9295874 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgccgtgagctagtttgcaggatgccaaat 9295973  T
Q  873 cgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtcgtttcttgggacggacgcacaatcgt 972  Q
    |||| ||||||  ||||||||||||||||||||   |||||||||| ||||| ||||||||||||||||||||| |  |||||| |||||||| ||||||    
T  9295974 cgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcattaag-tatccttgataaggactggtcataccttgggtcggacgca-aatcgt 9296071  T
Q  973 gacac 977  Q
    |||||    
T  9296072 gacac 9296076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 760 - 926
Target Start/End: Complemental strand, 40739457 - 40739291
Alignment:
Q  760 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggttg 859  Q
    |||||||||||| |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||| ||  ||||||||||| | |||    
T  40739457 tgttgagatttggcttcaaatttgtggtctggaagaacagacaaatcgtgacacgaatttggcatcgtgacacgattttgttatgccgtgagctggtttg 40739358  T
Q  860 cagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagtt 926  Q
    ||||||||||||||||||||||||  || | ||| ||||||| |||| |||||||||||||||||||    
T  40739357 cagggtgccaaatcgtgacacgatcttgtggaattgtgacacaattttcaaacttgctcgttaagtt 40739291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 106; E-Value: 2e-52
Query Start/End: Original strand, 773 - 946
Target Start/End: Original strand, 11098399 - 11098571
Alignment:
Q  773 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggttgcagggtgccaaat 872  Q
    ||||||||||||||||||||||||||| ||||||||||||||| |||||||| |||||||||||||  ||||||||||||||| |||||||  |||||||    
T  11098399 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatagtgacacgatttcaaggtgccgtgagctagtttgcaggacgccaaat 11098498  T
Q  873 cgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtc 946  Q
    |||| ||||||  |||||||||||||||||||||  |||||||||||||||| ||||  |||||||||||||||    
T  11098499 cgtggcacgatcttgggaaatcgtgacacgatttagaaacttgctcgttaag-tatcactgataaggactggtc 11098571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 102; E-Value: 4e-50
Query Start/End: Original strand, 773 - 946
Target Start/End: Complemental strand, 14292113 - 14291941
Alignment:
Q  773 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggttgcagggtgccaaat 872  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| ||| ||||||||||||||| |||||||  |||||||    
T  14292113 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatctcgaggtgccgtgagctagtttgcaggacgccaaat 14292014  T
Q  873 cgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtc 946  Q
    |||| ||||||  ||||||||||||||||||||   |||||||||||||||| || |  |||||||||||||||    
T  14292013 cgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaag-taccactgataaggactggtc 14291941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 80; E-Value: 6e-37
Query Start/End: Original strand, 755 - 942
Target Start/End: Original strand, 39811472 - 39811657
Alignment:
Q  755 ctttttgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagcta 854  Q
    ||||||||||| ||| | ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||  |   |||| ||| |    
T  39811472 ctttttgttgatattgg-cttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagtgaccgtaagcaa 39811570  T
Q  855 ggttgcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggact 942  Q
    | |||||||  ||||||||||| ||||||  ||||||||||||||||||||   ||||||||| |||||| ||||  |||||||||||    
T  39811571 gtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaag-tatcactgataaggact 39811657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 773 - 838
Target Start/End: Original strand, 44310483 - 44310548
Alignment:
Q  773 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttc 838  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  44310483 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttc 44310548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 823 - 926
Target Start/End: Original strand, 28258713 - 28258816
Alignment:
Q  823 atcgtgacacgatttcgtggtgccgtgagctaggttgcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgtta 922  Q
    ||||||||||||||| ||  ||||||||||| | |||||||||| ||||||||| ||| ||| || |||||||||||||||||| |||||||||| ||||    
T  28258713 atcgtgacacgattttgtaatgccgtgagctggtttgcagggtgtcaaatcgtggcacaattttgtgaaatcgtgacacgattttcaaacttgctggtta 28258812  T
Q  923 agtt 926  Q
    ||||    
T  28258813 agtt 28258816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 53; E-Value: 8e-21
Query Start/End: Original strand, 773 - 837
Target Start/End: Complemental strand, 32247340 - 32247276
Alignment:
Q  773 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgattt 837  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||| |||||||||||||||    
T  32247340 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacacgattt 32247276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 758 - 820
Target Start/End: Original strand, 28258667 - 28258729
Alignment:
Q  758 tttgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttg 820  Q
    |||||||| ||||| ||||||||||||||| ||||| ||||| ||||||||||||||| ||||    
T  28258667 tttgttgaaatttggcttcaaatttgtggtttggaaaaacagagaaatcgtgacacgattttg 28258729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 860 - 917
Target Start/End: Complemental strand, 34389375 - 34389318
Alignment:
Q  860 cagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgct 917  Q
    ||||||| | ||||||||||||||| ||||||| ||||||||||||| ||||||||||    
T  34389375 cagggtgtccaatcgtgacacgattttgggaaaacgtgacacgattttcaaacttgct 34389318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 857 - 917
Target Start/End: Original strand, 33528193 - 33528253
Alignment:
Q  857 ttgcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgct 917  Q
    |||||||||||  ||||||| ||||||| ||||||| ||||||||||||| ||||||||||    
T  33528193 ttgcagggtgctcaatcgtgtcacgattttgggaaaacgtgacacgattttcaaacttgct 33528253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 773 - 815
Target Start/End: Original strand, 8389636 - 8389678
Alignment:
Q  773 cttcaaatttgtggtctggaagaacagggaaatcgtgacacga 815  Q
    ||||||||||||||| ||||||||||| |||||||||||||||    
T  8389636 cttcaaatttgtggtttggaagaacagagaaatcgtgacacga 8389678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 774 - 946
Target Start/End: Complemental strand, 19349854 - 19349683
Alignment:
Q  774 ttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggca-tcgtgacacgatttcgtggtgccgtgagctaggtt-gcagggtgccaaa 871  Q
    |||||||||||||| ||||||||||| | ||||||| | | ||||||||| ||||||||||||   | | |||||||||| | ||| || ||  || |||    
T  19349854 ttcaaatttgtggtttggaagaacagaggaatcgtgtcgc-aatttggcaatcgtgacacgatcg-gagatgccgtgagccaagtttgctggaagcaaaa 19349757  T
Q  872 tcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtc 946  Q
    ||||| ||||||  ||||||||||||||||||||   ||||||| | |||||| ||||  |||||||||||||||    
T  19349756 tcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgttggttaag-tatctctgataaggactggtc 19349683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 857 - 906
Target Start/End: Complemental strand, 2837338 - 2837289
Alignment:
Q  857 ttgcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgattt 906  Q
    |||||||||| | ||||||||||||||| ||||||| |||||||||||||    
T  2837338 ttgcagggtgtccaatcgtgacacgattttgggaaaacgtgacacgattt 2837289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 760 - 946
Target Start/End: Complemental strand, 19345010 - 19344825
Alignment:
Q  760 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggca-tcgtgacacgatttcgtggtgccgtgagctaggtt 858  Q
    |||||| | ||| ||||||||||||||| ||||||||||| | ||||||| | ||| ||||||| |||||| |||||   | | |||||||||| | |||    
T  19345010 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcgcga-tttggcaatcgtgatacgatcg-gagatgccgtgagccaagtt 19344913  T
Q  859 -gcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtc 946  Q
     || ||  || ||||| || ||||||  ||||||||||||||||||||   ||||||||| |||||| ||||  |||||||||||||||    
T  19344912 tgctggaagcaaaatcatggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaag-tatctctgataaggactggtc 19344825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 773 - 813
Target Start/End: Original strand, 33528110 - 33528150
Alignment:
Q  773 cttcaaatttgtggtctggaagaacagggaaatcgtgacac 813  Q
    ||||||||||||||| ||||||||||| |||||||||||||    
T  33528110 cttcaaatttgtggtttggaagaacagagaaatcgtgacac 33528150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 773 - 812
Target Start/End: Complemental strand, 20522833 - 20522794
Alignment:
Q  773 cttcaaatttgtggtctggaagaacagggaaatcgtgaca 812  Q
    ||||||||||||||| ||||||||||| ||||||||||||    
T  20522833 cttcaaatttgtggtttggaagaacagagaaatcgtgaca 20522794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 759 - 814
Target Start/End: Complemental strand, 33118751 - 33118696
Alignment:
Q  759 ttgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacg 814  Q
    ||||||| ||||||||||||||||||| | ||| |||| || ||||||||||||||    
T  33118751 ttgttgaaatttgtcttcaaatttgtgttttgggagaatagagaaatcgtgacacg 33118696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 773 - 820
Target Start/End: Original strand, 36757430 - 36757477
Alignment:
Q  773 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttg 820  Q
    ||||||||||||||| |||||||||||  |||||||||||||| ||||    
T  36757430 cttcaaatttgtggtttggaagaacagaaaaatcgtgacacgattttg 36757477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 860 - 915
Target Start/End: Complemental strand, 39483401 - 39483346
Alignment:
Q  860 cagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttg 915  Q
    ||||||||  ||||||| ||||||| ||||||| ||||||||||||| ||||||||    
T  39483401 cagggtgctcaatcgtgtcacgattttgggaaaacgtgacacgattttcaaacttg 39483346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 773 - 815
Target Start/End: Original strand, 10706738 - 10706780
Alignment:
Q  773 cttcaaatttgtggtctggaagaacagggaaatcgtgacacga 815  Q
    |||||||||||| || ||||||||||| |||||||||||||||    
T  10706738 cttcaaatttgttgtttggaagaacagagaaatcgtgacacga 10706780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 773 - 815
Target Start/End: Complemental strand, 21630556 - 21630514
Alignment:
Q  773 cttcaaatttgtggtctggaagaacagggaaatcgtgacacga 815  Q
    |||||||||||| || ||||||||||| |||||||||||||||    
T  21630556 cttcaaatttgtagtttggaagaacagagaaatcgtgacacga 21630514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 860 - 906
Target Start/End: Original strand, 29867556 - 29867602
Alignment:
Q  860 cagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgattt 906  Q
    ||||||| | ||||||||||||||| ||||||| |||||||||||||    
T  29867556 cagggtgtccaatcgtgacacgattttgggaaaacgtgacacgattt 29867602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 773 - 815
Target Start/End: Complemental strand, 39483488 - 39483446
Alignment:
Q  773 cttcaaatttgtggtctggaagaacagggaaatcgtgacacga 815  Q
    ||||||||||||||| ||||||||||| ||||| |||||||||    
T  39483488 cttcaaatttgtggtttggaagaacagagaaattgtgacacga 39483446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 872 - 917
Target Start/End: Original strand, 8389732 - 8389777
Alignment:
Q  872 tcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgct 917  Q
    ||||| ||||||| ||||||| ||||||||||||| ||||||||||    
T  8389732 tcgtgtcacgattttgggaaaacgtgacacgattttcaaacttgct 8389777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 860 - 917
Target Start/End: Original strand, 10706825 - 10706882
Alignment:
Q  860 cagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgct 917  Q
    ||||||||  ||| ||| ||||||| ||||||| ||||||||||||| ||||||||||    
T  10706825 cagggtgctcaattgtgtcacgattttgggaaaacgtgacacgattttcaaacttgct 10706882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 159; Significance: 4e-84; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 159; E-Value: 4e-84
Query Start/End: Original strand, 760 - 977
Target Start/End: Complemental strand, 43504721 - 43504504
Alignment:
Q  760 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggttg 859  Q
    |||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | |||    
T  43504721 tgttgagatttagcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagctggtttg 43504622  T
Q  860 cagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtcgtttcttgggacg 959  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||  ||||||||     
T  43504621 cagggtgccaaatcgtgacacgatcgtgggaaatcgtgacacgatttgcaaacttgctcgttaagtt-tccatgataaggactggtcgtaccttgggaca 43504523  T
Q  960 gacgca-caatcgtgacac 977  Q
    || ||| ||||||||||||    
T  43504522 gatgcaccaatcgtgacac 43504504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 151; E-Value: 2e-79
Query Start/End: Original strand, 760 - 946
Target Start/End: Original strand, 24789426 - 24789611
Alignment:
Q  760 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggttg 859  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  24789426 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctagtttg 24789525  T
Q  860 cagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtc 946  Q
    ||||||||||||||||| ||||||  ||||||||||||||||||||   |||||||||||||||| |||||||||||||||||||||    
T  24789526 cagggtgccaaatcgtggcacgatcttgggaaatcgtgacacgattgtgaaacttgctcgttaag-tatccttgataaggactggtc 24789611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 143; E-Value: 1e-74
Query Start/End: Original strand, 760 - 977
Target Start/End: Original strand, 39730933 - 39731150
Alignment:
Q  760 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggttg 859  Q
    |||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| ||||||||||| | |||    
T  39730933 tgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgatgccgtgagctggtttg 39731032  T
Q  860 cagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtcgtttcttgggacg 959  Q
    ||||||||||||||||||||||||  || | |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||  |||||||||    
T  39731033 cagggtgccaaatcgtgacacgatcttgaggaatcgtgacacgatttgcaaacttgctcgttaagtt-tccatgataaggactggtcgtaccttgggacg 39731131  T
Q  960 gacgca-caatcgtgacac 977  Q
     ||| | ||||||||||||    
T  39731132 tacgtaccaatcgtgacac 39731150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 133; E-Value: 1e-68
Query Start/End: Original strand, 760 - 956
Target Start/End: Original strand, 20343500 - 20343694
Alignment:
Q  760 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggttg 859  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| | ||||||||||||||||||||| |||||||||||||||||||    
T  20343500 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacgcgattgtggcatcgtgacacgatttcggggtgccgtgagctaggttg 20343598  T
Q  860 cagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtcgtttcttggg 956  Q
    | || ||| |||||||| |||||||||||||||||||||||||||    |||||||||||||||| |||||||||||||||||||||||||||||||    
T  20343599 ccggatgcaaaatcgtgtcacgattgtgggaaatcgtgacacgatcgtgaaacttgctcgttaag-tatccttgataaggactggtcgtttcttggg 20343694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 133; E-Value: 1e-68
Query Start/End: Original strand, 756 - 948
Target Start/End: Original strand, 48408394 - 48408585
Alignment:
Q  756 tttttgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctag 855  Q
    |||||||||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| ||| ||||||||||| |    
T  48408394 tttttgttgagatttggcttcaaatttgtggtctgaaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgatgccgtgagctgg 48408493  T
Q  856 gttgcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtcgt 948  Q
     |||||||||||||||||||||||||||  || |||||||||||||||||||||||||||||||||||||| ||   ||||||||||||||||    
T  48408494 tttgcagggtgccaaatcgtgacacgatcttgagaaatcgtgacacgatttgcaaacttgctcgttaagtt-tctaggataaggactggtcgt 48408585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 128; E-Value: 1e-65
Query Start/End: Original strand, 760 - 959
Target Start/End: Complemental strand, 21646643 - 21646445
Alignment:
Q  760 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggttg 859  Q
    |||||| ||||| ||||||||||||||| ||||||||||| ||||||||||||| ||||||||||||||||||||||||||| ||||||||||| | |||    
T  21646643 tgttgacatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacaaatttggcatcgtgacacgatttcgtgatgccgtgagctggtttg 21646544  T
Q  860 cagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtcgtttcttgggacg 959  Q
    ||||||||||||||||||||||||  ||| ||||||||||||||||| ||||||||||||||||| ||||||||||||| ||||||| |  |||||||||    
T  21646543 cagggtgccaaatcgtgacacgatcttggaaaatcgtgacacgattttcaaacttgctcgttaag-tatccttgataagaactggtcataccttgggacg 21646445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 123; E-Value: 1e-62
Query Start/End: Original strand, 760 - 977
Target Start/End: Complemental strand, 18409399 - 18409182
Alignment:
Q  760 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggttg 859  Q
    |||||||||||| ||||||||||||| ||||||||||||| |||||||| |||||||||||||||||||||||||||| ||||||||||||||| | |||    
T  18409399 tgttgagatttggcttcaaatttgtgttctggaagaacagagaaatcgtaacacgaatttggcatcgtgacacgattttgtggtgccgtgagctggtttg 18409300  T
Q  860 cagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtcgtttcttgggacg 959  Q
    |||||||||||||| |||||||||  || |||||||||||||||||  |||||||||| |||||||| ||| |||||||||||||||||  |||| ||||    
T  18409299 cagggtgccaaatcatgacacgatcttgagaaatcgtgacacgattctcaaacttgcttgttaagtt-tccatgataaggactggtcgtaccttgtgacg 18409201  T
Q  960 gacgca-caatcgtgacac 977  Q
     ||| | ||||||||||||    
T  18409200 tacgtaccaatcgtgacac 18409182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 123; E-Value: 1e-62
Query Start/End: Original strand, 760 - 977
Target Start/End: Complemental strand, 18414275 - 18414058
Alignment:
Q  760 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggttg 859  Q
    |||||||||||| |||||||||| |||||||||||||||| |||||||||||||||||||||||||||| |||||||| ||||||||||||||| | |||    
T  18414275 tgttgagatttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgaatttggcatcgtggcacgattttgtggtgccgtgagctggtttg 18414176  T
Q  860 cagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtcgtttcttgggacg 959  Q
    ||||| ||||||||||||||||||  ||||||||||| ||||||||  |||||||||| |||||||| ||| |||||||||||||||||  |||| ||||    
T  18414175 cagggcgccaaatcgtgacacgatcttgggaaatcgtaacacgattctcaaacttgcttgttaagtt-tccatgataaggactggtcgtaccttgtgacg 18414077  T
Q  960 gacgca-caatcgtgacac 977  Q
     ||| | ||||||||||||    
T  18414076 tacgtaccaatcgtgacac 18414058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 121; E-Value: 2e-61
Query Start/End: Original strand, 758 - 977
Target Start/End: Complemental strand, 32060890 - 32060674
Alignment:
Q  758 tttgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagcta-gg 856  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| | |||||||||||| ||    
T  32060890 tttgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcg-gatgccgtgagctaggg 32060793  T
Q  857 ttgcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtcgtttcttggg 956  Q
    ||||||||   ||||||||| |||||||  || |||||||||||||||    |||||||||||||||| |||||||||||||||||||||||| ||||||    
T  32060792 ttgcaggggtgcaaatcgtggcacgatttgggaaaatcgtgacacgatcaagaaacttgctcgttaag-tatccttgataaggactggtcgttccttggg 32060694  T
Q  957 acggacgcacaatcgtgacac 977  Q
    ||||||||| |||||||||||    
T  32060693 acggacgca-aatcgtgacac 32060674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 119; E-Value: 3e-60
Query Start/End: Original strand, 760 - 977
Target Start/End: Complemental strand, 6592921 - 6592707
Alignment:
Q  760 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagcta-ggtt 858  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| | |||||||||||| ||||    
T  6592921 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttgggatcgtgacacgatttcg-gatgccgtgagctagggtt 6592824  T
Q  859 gcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtcgtttcttgggac 958  Q
    ||||||   ||||||||| |||||||  || |||||||||||||||    |||||||||||||||| |||||||||||||||||||||||| ||||||||    
T  6592823 gcaggggtgcaaatcgtggcacgatttgggaaaatcgtgacacgatccagaaacttgctcgttaag-tatccttgataaggactggtcgttccttgggac 6592725  T
Q  959 ggacgcacaatcgtgacac 977  Q
    ||||||| |||||||||||    
T  6592724 ggacgca-aatcgtgacac 6592707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 117; E-Value: 5e-59
Query Start/End: Original strand, 773 - 977
Target Start/End: Complemental strand, 21640411 - 21640209
Alignment:
Q  773 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggttgcagggtgccaaat 872  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||  |||||||    
T  21640411 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagctagtttgcaggacgccaaat 21640312  T
Q  873 cgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtcgtttcttgggacggacgcacaatcgt 972  Q
    |||||||||||  ||||||||||||||||||||   |||||||||| ||||| ||||  ||||||||||||||| |  ||||| ||||||||| ||||||    
T  21640311 cgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctcattaag-tatcactgataaggactggtcatgccttggaacggacgca-aatcgt 21640214  T
Q  973 gacac 977  Q
    |||||    
T  21640213 gacac 21640209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 759 - 977
Target Start/End: Complemental strand, 6595138 - 6594923
Alignment:
Q  759 ttgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagcta-ggt 857  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||||||||||||||| | |||||||||||| |||    
T  6595138 ttgttgagatt-gtcttcaaatttgtggtctggaaaaacagggaaatcgtgacacgattttgggatcgtgacacgatttcg-gatgccgtgagctagggt 6595041  T
Q  858 tgcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtcgtttcttggga 957  Q
    |||||||   ||||||||| |||||||  || |||||||||||||||    |||||||||||||||| |||||||||||||||||||||||| |||||||    
T  6595040 tgcaggggtgcaaatcgtggcacgatttgggaaaatcgtgacacgatccagaaacttgctcgttaag-tatccttgataaggactggtcgttccttggga 6594942  T
Q  958 cggacgcacaatcgtgacac 977  Q
    |||||||| |||||||||||    
T  6594941 cggacgca-aatcgtgacac 6594923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 115; E-Value: 8e-58
Query Start/End: Original strand, 760 - 977
Target Start/End: Complemental strand, 18392780 - 18392566
Alignment:
Q  760 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagcta-ggtt 858  Q
    |||||||||| ||||||||||||||||| ||||||||||||||||||||| ||||| ||||| |||||||||||| || | |||||||||||||| ||||    
T  18392780 tgttgagatt-gtcttcaaatttgtggtttggaagaacagggaaatcgtgccacgattttggaatcgtgacacga-ttggaggtgccgtgagctagggtt 18392683  T
Q  859 gcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtcgtttcttgggac 958  Q
    ||||||||| || |||||||||||||  || |||||||||||||||    |||||||||||||||| |||||||||||||||||||||||| ||||||||    
T  18392682 gcagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaag-tatccttgataaggactggtcgttccttgggac 18392584  T
Q  959 ggacgcacaatcgtgacac 977  Q
    ||||||| |||||||||||    
T  18392583 ggacgca-aatcgtgacac 18392566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 110; E-Value: 7e-55
Query Start/End: Original strand, 773 - 946
Target Start/End: Complemental strand, 2058592 - 2058421
Alignment:
Q  773 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggttgcagggtgccaaat 872  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| | ||||||||||||||| |||||||  |||||||    
T  2058592 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt-gaggtgccgtgagctagtttgcaggacgccaaat 2058494  T
Q  873 cgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtc 946  Q
    |||| ||||||  ||||||||||||||||||||   |||||||||||||||| |||||||||||||||||||||    
T  2058493 cgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaag-tatccttgataaggactggtc 2058421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 109; E-Value: 3e-54
Query Start/End: Original strand, 759 - 926
Target Start/End: Complemental strand, 25767541 - 25767380
Alignment:
Q  759 ttgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggtt 858  Q
    ||||||| ||||| |||||||||||||||||||||       ||||||||||||| ||||||||||||||||||||||||||| ||||||||||| | ||    
T  25767541 ttgttgatatttggcttcaaatttgtggtctggaaa------gaaatcgtgacacaaatttggcatcgtgacacgatttcgtgatgccgtgagctggttt 25767448  T
Q  859 gcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagtt 926  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||    
T  25767447 gcagggtgccaaatcgtgacacgattttgggaaatcgtgacacgattttcaaacttgctcgttaagtt 25767380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 106; E-Value: 2e-52
Query Start/End: Original strand, 773 - 946
Target Start/End: Original strand, 20357040 - 20357212
Alignment:
Q  773 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggttgcagggtgccaaat 872  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||  ||||||||||||||| |||||||  |||||||    
T  20357040 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgccgtgagctagtttgcaggacgccaaat 20357139  T
Q  873 cgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtc 946  Q
    |||| ||||||  ||||||||||||||| ||||   |||||||||||||||| |||||||||||||||| ||||    
T  20357140 cgtggcacgatcttgggaaatcgtgacatgattcagaaacttgctcgttaag-tatccttgataaggaccggtc 20357212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 91; E-Value: 2e-43
Query Start/End: Original strand, 760 - 926
Target Start/End: Complemental strand, 47264267 - 47264101
Alignment:
Q  760 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggttg 859  Q
    |||||| ||||| ||||||||||||||| |||||||| || ||||||||||||||| ||||||||||||||||||||| ||  || |||||||| | |||    
T  47264267 tgttgaaatttggcttcaaatttgtggtttggaagaatagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgtcgtgagctggtttg 47264168  T
Q  860 cagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagtt 926  Q
     |||||| ||||||||| ||| |||||| |||||||||||||||||| |||||||||| ||||||||    
T  47264167 tagggtgtcaaatcgtggcacaattgtgtgaaatcgtgacacgattttcaaacttgctggttaagtt 47264101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 90; E-Value: 6e-43
Query Start/End: Original strand, 804 - 945
Target Start/End: Original strand, 1532947 - 1533087
Alignment:
Q  804 atcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggttgcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacga 903  Q
    |||||||||||||||||||||||||||| ||||| | |||||| |||||||| |||||||||||||||||||||||||||  ||||||||||||||||||    
T  1532947 atcgtgacacgaatttggcatcgtgacatgattttgaggtgccatgagctagtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacga 1533046  T
Q  904 tttgcaaacttgctcgttaagttatccttgataaggactggt 945  Q
    ||   |||||| ||||||||| ||||||||||||||||||||    
T  1533047 ttgtgaaacttactcgttaag-tatccttgataaggactggt 1533087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 90; E-Value: 6e-43
Query Start/End: Original strand, 773 - 942
Target Start/End: Complemental strand, 12406845 - 12406677
Alignment:
Q  773 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggttgcagggtgccaaat 872  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||  |  |||||||||||| ||||| |  |||||||    
T  12406845 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagtggccgtgagctagtttgcaagacgccaaat 12406746  T
Q  873 cgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggact 942  Q
    |||| ||||||  ||||||||||||||||||||   |||||||||||||||| ||||  |||||||||||    
T  12406745 cgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaag-tatcactgataaggact 12406677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 87; E-Value: 4e-41
Query Start/End: Original strand, 759 - 977
Target Start/End: Complemental strand, 1562588 - 1562373
Alignment:
Q  759 ttgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggtt 858  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| | |  |    | | ||    
T  1562588 ttgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcgtgtttctttttttttgttt 1562490  T
Q  859 gcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtcgtttcttgggac 958  Q
       ||||   |||||||| ||||||| ||| |||||||||||||||    |||||||||||||||| |||||||||||||||||||||||| |||| |||    
T  1562489 tttgggttttaaatcgtgtcacgattttggtaaatcgtgacacgatcgtgaaacttgctcgttaag-tatccttgataaggactggtcgttccttgtgac 1562391  T
Q  959 ggacgcacaatcgtgacac 977  Q
    ||||||| |||||||||||    
T  1562390 ggacgca-aatcgtgacac 1562373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 83; E-Value: 9e-39
Query Start/End: Original strand, 760 - 926
Target Start/End: Complemental strand, 2479960 - 2479794
Alignment:
Q  760 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggttg 859  Q
    |||||| ||||| ||||||||||||||| || |||||||| ||||| ||||||||| |||||||||||||||||||||  |  ||||||||||| | |||    
T  2479960 tgttgaaatttggcttcaaatttgtggtttgtaagaacagagaaattgtgacacgattttggcatcgtgacacgattttctaatgccgtgagctggtttg 2479861  T
Q  860 cagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagtt 926  Q
    ||||||| ||||||||| ||||||| || |||||||| ||||||||| |||||||| | ||||||||    
T  2479860 cagggtgtcaaatcgtgtcacgattttgtgaaatcgttacacgattttcaaacttgttggttaagtt 2479794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 82; E-Value: 4e-38
Query Start/End: Original strand, 773 - 942
Target Start/End: Complemental strand, 4873709 - 4873541
Alignment:
Q  773 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggttgcagggtgccaaat 872  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||  |  ||||| || ||| |||||||  |||||||    
T  4873709 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagtggccgtaagatagtttgcaggacgccaaat 4873610  T
Q  873 cgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggact 942  Q
    |||| ||||||  |||||||||||||||| |||   |||||||||||||||| ||||  |||||||||||    
T  4873609 cgtggcacgatcttgggaaatcgtgacacaattcagaaacttgctcgttaag-tatcactgataaggact 4873541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 82; E-Value: 4e-38
Query Start/End: Original strand, 773 - 946
Target Start/End: Original strand, 24023831 - 24024003
Alignment:
Q  773 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggttgcagggtgccaaat 872  Q
    ||||||||||||||||||||||||||| ||||||||||||||| | |||||||||| |||||||||  |  || | ||||||| |||||||  |||||||    
T  24023831 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgattgtggcatcgtggcacgatttcaagtggcagagagctagtttgcaggacgccaaat 24023930  T
Q  873 cgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtc 946  Q
    |||| ||||||  ||||||||||||||||||||   |||||||||||||||| ||||  |||||||||||||||    
T  24023931 cgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaag-tatcactgataaggactggtc 24024003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 767 - 946
Target Start/End: Original strand, 21811745 - 21811923
Alignment:
Q  767 atttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagcta-ggttgcagggt 865  Q
    ||||| ||||||||||||||||||||||||||| | ||||||| ||||| |||| |||||||||||||| | | | |||||||||| | | |||||||||    
T  21811745 atttggcttcaaatttgtggtctggaagaacagaggaatcgtgtcacgattttgccatcgtgacacgatct-gagatgccgtgagcaatgtttgcagggt 21811843  T
Q  866 gccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtc 946  Q
    || |||||||| ||||||  |||||||||||||||||||    ||||||||| |||||| ||||  |||||||||||||||    
T  21811844 gcaaaatcgtggcacgatcttgggaaatcgtgacacgatccagaaacttgctagttaag-tatctctgataaggactggtc 21811923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 760 - 834
Target Start/End: Original strand, 1532884 - 1532958
Alignment:
Q  760 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacga 834  Q
    |||||| ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  1532884 tgttgatatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacga 1532958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 859 - 977
Target Start/End: Complemental strand, 18389246 - 18389130
Alignment:
Q  859 gcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtcgtttcttgggac 958  Q
    ||||||||| || |||||||||||||  || |||||||||||||||    ||||||||||||||||| ||||||||||||||||||||||| ||||||||    
T  18389246 gcagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagt-atccttgataaggactggtcgttccttgggac 18389148  T
Q  959 ggacgcacaatcgtgacac 977  Q
    ||||||| |||||||||||    
T  18389147 ggacgca-aatcgtgacac 18389130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 773 - 925
Target Start/End: Original strand, 31109082 - 31109235
Alignment:
Q  773 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgcc-gtgagct-aggttgcagggtgccaa 870  Q
    ||||||||||||||| ||||||||||| ||||||||||||||| |||||||||||| |||||||||   ||||| || |||| || |||||||  |||||    
T  31109082 cttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtggcacgatttc-aagtgcctgtaagctaagtttgcaggacgccaa 31109180  T
Q  871 atcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagt 925  Q
    |||||| ||||||  ||||||||||||||||||||   ||||||||| |||||||    
T  31109181 atcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagt 31109235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 760 - 915
Target Start/End: Complemental strand, 21983867 - 21983712
Alignment:
Q  760 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggttg 859  Q
    |||||| | ||| ||||||||||||||| ||||||||||| ||||||||||||||| ||   |||||||||||||||| |   || |||||||| | |||    
T  21983867 tgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgatttcatcatcgtgacacgattttgcaatgtcgtgagctggtttg 21983768  T
Q  860 cagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttg 915  Q
    ||||||| | ||||| | || |||| || |||| ||||||||||||| ||||||||    
T  21983767 cagggtgaccaatcgcggcatgattttgtgaaaacgtgacacgattttcaaacttg 21983712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 773 - 863
Target Start/End: Complemental strand, 12397480 - 12397390
Alignment:
Q  773 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggttgcagg 863  Q
    ||||||||||||||||||||||||||| ||||||| ||||||| ||||| ||||||||||||||||  |  |||||||||||| |||||||    
T  12397480 cttcaaatttgtggtctggaagaacagagaaatcgcgacacgattttggtatcgtgacacgatttcaagtggccgtgagctagtttgcagg 12397390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 759 - 876
Target Start/End: Original strand, 44847618 - 44847735
Alignment:
Q  759 ttgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggtt 858  Q
    ||||||| ||||| ||||||||||||||| |  |||||||| ||||||||||||||| ||||||||||||||||||||| ||  || |||||||| | ||    
T  44847618 ttgttgaaatttggcttcaaatttgtggtttaaaagaacagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgtcgtgagctggttt 44847717  T
Q  859 gcagggtgccaaatcgtg 876  Q
    ||||| || || ||||||    
T  44847718 gcaggatgtcagatcgtg 44847735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 758 - 915
Target Start/End: Complemental strand, 21989533 - 21989377
Alignment:
Q  758 tttgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggt 857  Q
    |||||||| | ||| ||||||||||||||| ||||||||||| |||||||||||| || ||   |||||||||||||||| |   || |||||||| | |    
T  21989533 tttgttgaaagttggcttcaaatttgtggtttggaagaacagagaaatcgtgacaagatttcatcatcgtgacacgattttgcaatgtcgtgagctggtt 21989434  T
Q  858 tgcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttg 915  Q
    ||||||| | | ||||||| ||||||| || |||| ||||||||||||| | ||||||    
T  21989433 tgcagggcgaccaatcgtggcacgattttgtgaaa-cgtgacacgattttccaacttg 21989377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 869 - 946
Target Start/End: Original strand, 24260929 - 24261005
Alignment:
Q  869 aaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtc 946  Q
    |||||||||||||||  ||||||||||||||||||||   ||||||||| |||||| ||||  |||||||||||||||    
T  24260929 aaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaag-tatctctgataaggactggtc 24261005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 760 - 815
Target Start/End: Complemental strand, 18390562 - 18390508
Alignment:
Q  760 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacga 815  Q
    |||||||||| ||||||||||||||||| | ||||||||||||||||||| |||||    
T  18390562 tgttgagatt-gtcttcaaatttgtggtttagaagaacagggaaatcgtgccacga 18390508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 773 - 946
Target Start/End: Complemental strand, 16880648 - 16880476
Alignment:
Q  773 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgag-ctaggttgcagggtgccaaa 871  Q
    ||||||||| ||||| ||||||| ||| | ||||||| ||||| |||| ||||||||||||| |  | |  || ||||| |||| |||| ||  || |||    
T  16880648 cttcaaattagtggtttggaagagcagaggaatcgtgtcacgattttgccatcgtgacacga-tcagggaggcagtgagcctagtttgctggaagcaaaa 16880550  T
Q  872 tcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtc 946  Q
    ||||| ||||||  |||||||| |||||||||||   ||||||||| |||||||| ||  |||||||||||||||    
T  16880549 tcgtgtcacgatcttgggaaattgtgacacgattcagaaacttgctggttaagtt-tctctgataaggactggtc 16880476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 773 - 946
Target Start/End: Complemental strand, 16885503 - 16885331
Alignment:
Q  773 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgag-ctaggttgcagggtgccaaa 871  Q
    ||||||||| ||||| ||||||| ||| | ||||||| ||||| |||| ||||||||||||| |  | |  || ||||| |||| |||| ||  || |||    
T  16885503 cttcaaattagtggtttggaagagcagaggaatcgtgtcacgattttgccatcgtgacacga-tcagggaggcagtgagcctagtttgctggaagcaaaa 16885405  T
Q  872 tcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtc 946  Q
    ||||| ||||||  |||||||| |||||||||||   ||||||||| |||||||| ||  |||||||||||||||    
T  16885404 tcgtgtcacgatcttgggaaattgtgacacgattcagaaacttgctggttaagtt-tctctgataaggactggtc 16885331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 861 - 906
Target Start/End: Complemental strand, 4539041 - 4538996
Alignment:
Q  861 agggtgccaaatcgtgacacgattgtgggaaatcgtgacacgattt 906  Q
    |||||||| ||||||||||||||| ||||||| |||||||||||||    
T  4539041 agggtgcctaatcgtgacacgattttgggaaaacgtgacacgattt 4538996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 869 - 946
Target Start/End: Original strand, 24265785 - 24265861
Alignment:
Q  869 aaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtc 946  Q
    |||||||| ||||||  ||||||||||||||||||||   ||||||||| |||||| ||||  |||||||||||||||    
T  24265785 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaag-tatctctgataaggactggtc 24265861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 857 - 906
Target Start/End: Complemental strand, 47674437 - 47674388
Alignment:
Q  857 ttgcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgattt 906  Q
    |||||||||| | ||||||||||||||| ||||||| |||||||||||||    
T  47674437 ttgcagggtgtccaatcgtgacacgattttgggaaaacgtgacacgattt 47674388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 857 - 906
Target Start/End: Complemental strand, 47676630 - 47676581
Alignment:
Q  857 ttgcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgattt 906  Q
    |||||||||| | ||||||||||||||| ||||||| |||||||||||||    
T  47676630 ttgcagggtgtccaatcgtgacacgattttgggaaaacgtgacacgattt 47676581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 870 - 906
Target Start/End: Original strand, 4178461 - 4178497
Alignment:
Q  870 aatcgtgacacgattgtgggaaatcgtgacacgattt 906  Q
    ||||||||||||||| |||||||||||||||||||||    
T  4178461 aatcgtgacacgattttgggaaatcgtgacacgattt 4178497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 773 - 815
Target Start/End: Complemental strand, 80000 - 79958
Alignment:
Q  773 cttcaaatttgtggtctggaagaacagggaaatcgtgacacga 815  Q
    ||||||||||||| | ||||||||||| |||||||||||||||    
T  80000 cttcaaatttgtgatttggaagaacagagaaatcgtgacacga 79958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 860 - 906
Target Start/End: Original strand, 23554716 - 23554762
Alignment:
Q  860 cagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgattt 906  Q
    ||||||| | ||||||||||||||| ||||||| |||||||||||||    
T  23554716 cagggtgtccaatcgtgacacgattttgggaaaacgtgacacgattt 23554762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 773 - 835
Target Start/End: Original strand, 24260833 - 24260895
Alignment:
Q  773 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgat 835  Q
    ||||||||||||||| ||| ||||||| | ||||||| ||||| || | ||||||||||||||    
T  24260833 cttcaaatttgtggtttgggagaacagaggaatcgtgtcacgatttggccatcgtgacacgat 24260895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 857 - 906
Target Start/End: Original strand, 4796239 - 4796288
Alignment:
Q  857 ttgcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgattt 906  Q
    |||||||||||  ||||||||||||||| ||| ||| |||||||||||||    
T  4796239 ttgcagggtgctcaatcgtgacacgattttggaaaaacgtgacacgattt 4796288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 857 - 906
Target Start/End: Complemental strand, 6360624 - 6360575
Alignment:
Q  857 ttgcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgattt 906  Q
    |||||||||||| ||| ||||||||||| |||| || |||||||||||||    
T  6360624 ttgcagggtgcccaattgtgacacgattttggggaaacgtgacacgattt 6360575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 857 - 906
Target Start/End: Complemental strand, 48599990 - 48599941
Alignment:
Q  857 ttgcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgattt 906  Q
    |||||||||||  ||||||||||||||| |||| || |||||||||||||    
T  48599990 ttgcagggtgcacaatcgtgacacgattatggggaaacgtgacacgattt 48599941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 158; Significance: 2e-83; HSPs: 47)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 158; E-Value: 2e-83
Query Start/End: Original strand, 759 - 978
Target Start/End: Original strand, 411684 - 411904
Alignment:
Q  759 ttgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggtt 858  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||  |    
T  411684 ttgttgagatttgtcttcaaatttgtggtctggaagaatagggaaatcgtgacacgaatttggcattgtgacacaatttcgtggtgccgtgagctagtct 411783  T
Q  859 gcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatt-tgcaaacttgctcgttaagttatccttgataaggactggtcgtttcttggga 957  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| ||||||||||||||| |  |||||||    
T  411784 gcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgattgtgcaaacttgctcgttaagtt-tccatgataaggactggtcataccttggga 411882  T
Q  958 cggacgca-caatcgtgacaca 978  Q
    |||| ||| |||||||||||||    
T  411883 cggatgcaccaatcgtgacaca 411904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 147; E-Value: 6e-77
Query Start/End: Original strand, 760 - 946
Target Start/End: Complemental strand, 3073343 - 3073158
Alignment:
Q  760 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggttg 859  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| |  |     
T  3073343 tgttgagatttgtcttcaaatttgtggtctggaagaacaggaaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagctggtcta 3073244  T
Q  860 cagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtc 946  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||    
T  3073243 cagggtgccaaatcgtgacacgattgttggaaatcgtgacacgatttgcaaacttgctcgttaagtt-tccatgataaggactggtc 3073158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 137; E-Value: 6e-71
Query Start/End: Original strand, 760 - 956
Target Start/End: Original strand, 27647467 - 27647662
Alignment:
Q  760 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggttg 859  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| |||||||||||||||||||    
T  27647467 tgttgagttttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggcatcgtgacacgatttcggggtgccgtgagctaggttg 27647566  T
Q  860 cagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtcgtttcttggg 956  Q
    |||||||| |||||||| |||||||||| ||||||||||||||||    |||||||||||||||| |||||||||||  ||||||||||||||||||    
T  27647567 cagggtgcaaaatcgtggcacgattgtgagaaatcgtgacacgatcgtgaaacttgctcgttaag-tatccttgatattgactggtcgtttcttggg 27647662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 135; E-Value: 9e-70
Query Start/End: Original strand, 758 - 956
Target Start/End: Complemental strand, 16579103 - 16578907
Alignment:
Q  758 tttgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggt 857  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||||||||    
T  16579103 tttgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggt 16579005  T
Q  858 tgcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtcgtttcttggg 956  Q
    |||||||||| |||||||| |||||||  || |||||||||||||||    |||||||||||||||| |||||||||||||||||||||||||||||||    
T  16579004 tgcagggtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaag-tatccttgataaggactggtcgtttcttggg 16578907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 135; E-Value: 9e-70
Query Start/End: Original strand, 758 - 956
Target Start/End: Original strand, 16616277 - 16616473
Alignment:
Q  758 tttgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggt 857  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||||||||    
T  16616277 tttgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctaggt 16616375  T
Q  858 tgcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtcgtttcttggg 956  Q
    |||||||||| |||||||| |||||||  || |||||||||||||||    |||||||||||||||| |||||||||||||||||||||||||||||||    
T  16616376 tgcagggtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaag-tatccttgataaggactggtcgtttcttggg 16616473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 129; E-Value: 3e-66
Query Start/End: Original strand, 760 - 948
Target Start/End: Complemental strand, 22709645 - 22709458
Alignment:
Q  760 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggttg 859  Q
    |||||||||||| ||||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||||||| ||| |||| |||||| | |||    
T  22709645 tgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcatgacacgaatttggcaacgtgacacgattttgtgatgccatgagctggtttg 22709546  T
Q  860 cagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtcgt 948  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||||||||||| ||| |||||||||||||||||    
T  22709545 cagggtgccaaatcgtgacacgatcttgggaaatcgtgacacgattttcaaacttgctcgttaagtt-tccatgataaggactggtcgt 22709458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 123; E-Value: 1e-62
Query Start/End: Original strand, 759 - 977
Target Start/End: Original strand, 5674228 - 5674444
Alignment:
Q  759 ttgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggtt 858  Q
    ||||||| | ||| ||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||| ||||| ||| ||||||||||| | ||    
T  5674228 ttgttgatagttggcttcaaatttgtggtctggaagaacagagaaatcgtgacatgaatttggcatcgtgacatgattttgtgatgccgtgagctggttt 5674327  T
Q  859 gcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtcgtttcttgggac 958  Q
    |||||||||||||||||||||| ||  |||||||||||||||||||||  |||||||||||||||| ||||| ||||||||||||||| |  ||||||||    
T  5674328 gcagggtgccaaatcgtgacacaatcttgggaaatcgtgacacgattttgaaacttgctcgttaag-tatccgtgataaggactggtcataccttgggac 5674426  T
Q  959 ggacgcacaatcgtgacac 977  Q
    | ||||| |||||||||||    
T  5674427 gtacgca-aatcgtgacac 5674444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 121; E-Value: 2e-61
Query Start/End: Original strand, 760 - 956
Target Start/End: Original strand, 16554454 - 16554648
Alignment:
Q  760 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggttg 859  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||| || ||||| ||||||||||||||||| ||||||||||||||||||     
T  16554454 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcggggtgccgtgagctaggtta 16554552  T
Q  860 cagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtcgtttcttggg 956  Q
    |||||||| |||| ||| |||||||  || |||||||||||||||    |||||||||||||||| |||||||||||||||||||||||||||||||    
T  16554553 cagggtgcaaaattgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaag-tatccttgataaggactggtcgtttcttggg 16554648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 121; E-Value: 2e-61
Query Start/End: Original strand, 760 - 956
Target Start/End: Original strand, 16631010 - 16631204
Alignment:
Q  760 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggttg 859  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||| || ||||| ||||||||||||||||| ||||||||||||||||||     
T  16631010 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcggggtgccgtgagctaggtta 16631108  T
Q  860 cagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtcgtttcttggg 956  Q
    |||||||| |||| ||| |||||||  || |||||||||||||||    |||||||||||||||| |||||||||||||||||||||||||||||||    
T  16631109 cagggtgcaaaattgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaag-tatccttgataaggactggtcgtttcttggg 16631204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 120; E-Value: 8e-61
Query Start/End: Original strand, 755 - 977
Target Start/End: Complemental strand, 2172109 - 2171887
Alignment:
Q  755 ctttttgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagcta 854  Q
    |||| ||||||||||||  |||||||||||||||||||||||||| ||||||| |||| |||||||||||||||||||||||||||| |||||||||||     
T  2172109 ctttctgttgagatttggtttcaaatttgtggtctggaagaacagagaaatcgggacatgaatttggcatcgtgacacgatttcgtgatgccgtgagctg 2172010  T
Q  855 ggttgcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtcgtttcttg 954  Q
    | |||||||||||||||||||||||||||  ||||||||||||||||||||   |||||||||||||||||| |||  ||||||||| ||||||  ||||    
T  2172009 gtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacgattgtaaaacttgctcgttaagtt-tccaagataaggacaggtcgtaccttg 2171911  T
Q  955 ggacggacgca-caatcgtgacac 977  Q
     |||| ||| | ||||||||||||    
T  2171910 tgacgtacgtaccaatcgtgacac 2171887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 117; E-Value: 5e-59
Query Start/End: Original strand, 759 - 978
Target Start/End: Complemental strand, 6136548 - 6136332
Alignment:
Q  759 ttgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagcta-ggt 857  Q
    ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| ||||| |||| |||||||||||| | |||||||||||| |||    
T  6136548 ttgttgagatt-gtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttggaatcgagacacgatttcg-gatgccgtgagctagggt 6136451  T
Q  858 tgcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtcgtttcttggga 957  Q
    |||||||    |||||||| |||||||||||||||||||||||||||    |||||||||||||||| |||||||||||||||||||||||| |||||||    
T  6136450 tgcaggggtgaaaatcgtggcacgattgtgggaaatcgtgacacgatccagaaacttgctcgttaag-tatccttgataaggactggtcgttccttggga 6136352  T
Q  958 cggacgcacaatcgtgacaca 978  Q
    |||| ||| ||||||||||||    
T  6136351 cggaagca-aatcgtgacaca 6136332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 110; E-Value: 7e-55
Query Start/End: Original strand, 760 - 976
Target Start/End: Original strand, 25420797 - 25421010
Alignment:
Q  760 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagcta-ggtt 858  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||| | ||||| | ||||||||||||||| | |||||||||||| ||||    
T  25420797 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacaattttgggaccgtgacacgatttcg-gatgccgtgagctagggtt 25420894  T
Q  859 gcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtcgtttcttgggac 958  Q
    ||||||   ||||||||| |||||||  || |||||||||||||||    |||||||||||||||| |||||||||||||||||||||||| ||||||||    
T  25420895 gcaggggtgcaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaag-tatccttgataaggactggtcgttccttgggac 25420993  T
Q  959 ggacgcacaatcgtgaca 976  Q
    ||||||| ||||||||||    
T  25420994 ggacgca-aatcgtgaca 25421010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 109; E-Value: 3e-54
Query Start/End: Original strand, 773 - 925
Target Start/End: Original strand, 30125030 - 30125182
Alignment:
Q  773 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggttgcagggtgccaaat 872  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||  |||||||    
T  30125030 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagctagtttgcaggacgccaaat 30125129  T
Q  873 cgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagt 925  Q
    |||| ||||||| ||||||||||||||||||||   |||||||||||||||||    
T  30125130 cgtggcacgattttgggaaatcgtgacacgattcagaaacttgctcgttaagt 30125182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 108; E-Value: 1e-53
Query Start/End: Original strand, 768 - 977
Target Start/End: Original strand, 13150856 - 13151064
Alignment:
Q  768 tttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagcta-ggttgcagggtg 866  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||| ||||| |||||||| |||||||| | ||||||||| || ||||||||||      
T  13150856 tttgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttcg-gatgccgtgagttagggttgcaggggt 13150954  T
Q  867 ccaaatcgtgacacgattgtggg-aaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtcgtttcttgggacggacgca 965  Q
     ||||||||||||||||| |||| |||||||||||||||    |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||    
T  13150955 gcaaatcgtgacacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaag-tatccttgataaggactggtcgttccttgggacggacgca 13151053  T
Q  966 caatcgtgacac 977  Q
     |||||||||||    
T  13151054 -aatcgtgacac 13151064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 108; E-Value: 1e-53
Query Start/End: Original strand, 768 - 977
Target Start/End: Original strand, 34166673 - 34166881
Alignment:
Q  768 tttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagcta-ggttgcagggtg 866  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| ||||| |||||||| |||||||| | ||||||||| || ||||||||||      
T  34166673 tttgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttcg-gatgccgtgagttagggttgcaggggt 34166771  T
Q  867 ccaaatcgtgacacgattgtggg-aaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtcgtttcttgggacggacgca 965  Q
     ||||||||||||||||| |||| |||||||||||||||    |||||||||||||||| |||||||||||||||||||||||| ||||||||| |||||    
T  34166772 gcaaatcgtgacacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaag-tatccttgataaggactggtcgttccttgggacgtacgca 34166870  T
Q  966 caatcgtgacac 977  Q
     |||||||||||    
T  34166871 -aatcgtgacac 34166881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 104; E-Value: 3e-51
Query Start/End: Original strand, 760 - 977
Target Start/End: Complemental strand, 33342688 - 33342473
Alignment:
Q  760 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagcta-ggtt 858  Q
    |||||||||| ||||||||||||||||| |||||||||| |||||||||||||||| ||||| |||| ||| |||||||| | |||||||||||| ||||    
T  33342688 tgttgagatt-gtcttcaaatttgtggtttggaagaacatggaaatcgtgacacgattttgggatcgcgacgcgatttcg-gatgccgtgagctagggtt 33342591  T
Q  859 gcagggtgccaaatcgtgacacga-ttgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtcgtttcttggga 957  Q
    ||||||   ||||||||| ||||| || |||||||||||||||||||    |||||||||||||||| |||||||||||||||||||||||| |||||||    
T  33342590 gcaggggtgcaaatcgtggcacgatttctgggaaatcgtgacacgatcaagaaacttgctcgttaag-tatccttgataaggactggtcgttccttggga 33342492  T
Q  958 cggacgcacaatcgtgacac 977  Q
    |||||||| |||||||||||    
T  33342491 cggacgca-aatcgtgacac 33342473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 102; E-Value: 4e-50
Query Start/End: Original strand, 759 - 884
Target Start/End: Complemental strand, 6097987 - 6097862
Alignment:
Q  759 ttgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggtt 858  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| | ||    
T  6097987 ttgttgagatttgtcttcaaatttgtggtttggaagaacagggaaatcctgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagctggttt 6097888  T
Q  859 gcagggtgccaaatcgtgacacgatt 884  Q
    ||||||||| ||||||||||||||||    
T  6097887 gcagggtgctaaatcgtgacacgatt 6097862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 101; E-Value: 2e-49
Query Start/End: Original strand, 759 - 977
Target Start/End: Original strand, 34164443 - 34164659
Alignment:
Q  759 ttgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagcta-ggt 857  Q
    |||||||| |||||||||||||||||||  ||||||||||||||||||||||||||| | ||| |||||||| |||||||| | ||||||||| || |||    
T  34164443 ttgttgag-tttgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattctgggatcgtgacgcgatttcg-gatgccgtgagttagggt 34164540  T
Q  858 tgcagggtgccaaatcgtgacacgattgtggg-aaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtcgtttcttggg 956  Q
    |||||||   ||||||||| ||||||| |||| |||||||||||||||    |||||||||||||||| |||||||||||||||||||||||| ||||||    
T  34164541 tgcaggggtgcaaatcgtgtcacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaag-tatccttgataaggactggtcgttccttggg 34164639  T
Q  957 acggacgcacaatcgtgacac 977  Q
    ||||||||| |||||||||||    
T  34164640 acggacgca-aatcgtgacac 34164659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 97; E-Value: 4e-47
Query Start/End: Original strand, 773 - 925
Target Start/End: Complemental strand, 11857555 - 11857403
Alignment:
Q  773 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggttgcagggtgccaaat 872  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||  |  |||||||||||| |||||||  |||||||    
T  11857555 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagtggccgtgagctagtttgcaggacgccaaat 11857456  T
Q  873 cgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagt 925  Q
    |||| ||||||  |||||||||||||||||||||  |||||||||||||||||    
T  11857455 cgtggcacgatcttgggaaatcgtgacacgatttagaaacttgctcgttaagt 11857403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 95; E-Value: 7e-46
Query Start/End: Original strand, 760 - 977
Target Start/End: Original strand, 6026834 - 6027048
Alignment:
Q  760 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagcta-ggtt 858  Q
    |||||||||| ||||||||||||||||| |||||||| |||||||||||||||||| |  ||||| |||||||||||||| |||| || |||||| ||||    
T  6026834 tgttgagatt-gtcttcaaatttgtggtttggaagaatagggaaatcgtgacacgattgcggcattgtgacacgatttcgaggtg-cgagagctagggtt 6026931  T
Q  859 gcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtcgtttcttgggac 958  Q
    ||||||   ||||||||| |||||||  || |||||||||||||||    |||||||||||||||| |||||||||||||||| ||||||| ||||||||    
T  6026932 gcaggggtgcaaatcgtggcacgatttgggaaaatcgtgacacgatccagaaacttgctcgttaag-tatccttgataaggaccggtcgttccttgggac 6027030  T
Q  959 ggacgcacaatcgtgacac 977  Q
    ||||||| |||||||||||    
T  6027031 ggacgca-aatcgtgacac 6027048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 760 - 884
Target Start/End: Original strand, 26253589 - 26253713
Alignment:
Q  760 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggttg 859  Q
    ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| ||||| ||| | ||||||| ||| | |    
T  26253589 tgttgagatttgtcttcaaatttgtggtctgaaagaacagagaaatcgtgacacgaatttggcatcgtgacaagattttgtgataccgtgagatagttag 26253688  T
Q  860 cagggtgccaaatcgtgacacgatt 884  Q
    |||||||||||||||||||||||||    
T  26253689 cagggtgccaaatcgtgacacgatt 26253713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 86; E-Value: 2e-40
Query Start/End: Original strand, 773 - 942
Target Start/End: Original strand, 14741938 - 14742106
Alignment:
Q  773 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggttgcagggtgccaaat 872  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||  |  | |||||||||| |||||||  |||||||    
T  14741938 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagtggtcgtgagctagtttgcaggacgccaaat 14742037  T
Q  873 cgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggact 942  Q
    |||| ||||||  ||| ||||||||||||||||   |||||||||||||||| ||||  |||||||||||    
T  14742038 cgtggcacgatcttggaaaatcgtgacacgattcagaaacttgctcgttaag-tatcactgataaggact 14742106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 86; E-Value: 2e-40
Query Start/End: Original strand, 773 - 942
Target Start/End: Original strand, 22010201 - 22010369
Alignment:
Q  773 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggttgcagggtgccaaat 872  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||  |  ||||| || ||| |||||||  |||||||    
T  22010201 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagtggccgtaagttagtttgcaggacgccaaat 22010300  T
Q  873 cgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggact 942  Q
    |||| ||||||  ||||||||||||||||||||   |||||||||||||||| ||||  |||||||||||    
T  22010301 cgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaag-tatcactgataaggact 22010369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 75; E-Value: 6e-34
Query Start/End: Original strand, 823 - 977
Target Start/End: Complemental strand, 5266610 - 5266458
Alignment:
Q  823 atcgtgacacgatttcgtggtgccgtgagctaggttgcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgtta 922  Q
    ||||||||||||||||| ||||||||||||||| |||||||  ||||||||||| ||||||  ||||||||||||||||||||   |||||||||| |||    
T  5266610 atcgtgacacgatttcgaggtgccgtgagctagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcatta 5266511  T
Q  923 agttatccttgataaggactggtcgtttcttgggacggacgcacaatcgtgacac 977  Q
    || ||||||||||||||||||||| |  ||||  ||||||||| |||||||||||    
T  5266510 ag-tatccttgataaggactggtcataccttgaaacggacgca-aatcgtgacac 5266458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 75; E-Value: 6e-34
Query Start/End: Original strand, 760 - 926
Target Start/End: Complemental strand, 23896957 - 23896791
Alignment:
Q  760 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggttg 859  Q
    |||||| ||||| ||||||||||||||| || ||||||||  |||||||||||||| ||||||||||||||||||||| ||  |  |||||| | | |||    
T  23896957 tgttgaaatttgccttcaaatttgtggtttgaaagaacagaaaaatcgtgacacgattttggcatcgtgacacgattttgtaatatcgtgagttggtttg 23896858  T
Q  860 cagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagtt 926  Q
    ||||||| |||||||||  |||||| || ||||||||||||||||||  ||||||||| ||||||||    
T  23896857 cagggtgtcaaatcgtggtacgattttgtgaaatcgtgacacgatttttaaacttgctggttaagtt 23896791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 823 - 956
Target Start/End: Original strand, 16652759 - 16652891
Alignment:
Q  823 atcgtgacacgatttcgtggtgccgtgagctaggttgcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgtta 922  Q
    ||||||||||||||||| ||||||||||||||||||| ||||||| || |||||  ||||||  || |||||||||||| ||    ||||||||||||||    
T  16652759 atcgtgacacgatttcggggtgccgtgagctaggttgtagggtgcaaagtcgtggaacgatttgggaaaatcgtgacacaatcgtgaaacttgctcgtta 16652858  T
Q  923 agttatccttgataaggactggtcgtttcttggg 956  Q
    || |||||||||||||||||||||||||||||||    
T  16652859 ag-tatccttgataaggactggtcgtttcttggg 16652891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 773 - 946
Target Start/End: Complemental strand, 6439071 - 6438899
Alignment:
Q  773 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgag-ctaggttgcagggtgccaaa 871  Q
    |||||||||| |||||||||||||||  ||||||||||||||| ||||| |||||||||||| || | ||||||||||| | || |||| || |||  ||    
T  6439071 cttcaaatttatggtctggaagaacatagaaatcgtgacacgattttggaatcgtgacacga-ttggaggtgccgtgagccaagtttgctggatgcataa 6438973  T
Q  872 tcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtc 946  Q
    ||||| ||||||  ||||||||||||||||||||   ||||||||| |||||| ||||  |||||||||||||||    
T  6438972 tcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctagttaag-tatcactgataaggactggtc 6438899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 758 - 926
Target Start/End: Original strand, 5756949 - 5757117
Alignment:
Q  758 tttgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggt 857  Q
    |||||||| ||||| ||| |||||| |||| |  ||||| || ||||| ||||||||| | |||||||||||||| |||| ||  || |||||| | | |    
T  5756949 tttgttgaaatttggctttaaatttatggtttaaaagaatagagaaattgtgacacgattgtggcatcgtgacacaattttgtaatgtcgtgagttggtt 5757048  T
Q  858 tgcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagtt 926  Q
    ||||||||| |||||||||  |||||| || |||||||||||||||||| |||||||||| ||||||||    
T  5757049 tgcagggtgtcaaatcgtggtacgattttgtgaaatcgtgacacgattttcaaacttgctggttaagtt 5757117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 868 - 976
Target Start/End: Original strand, 25420999 - 25421104
Alignment:
Q  868 caaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtcgtttcttgggacggacgcaca 967  Q
    |||||||||||| ||||| || |||||||||||||||    ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |    
T  25420999 caaatcgtgacatgattg-ggaaaatcgtgacacgatcgtgaaacttgctcgttaagt-atccttgataaggactggtcgttccttgggacggacgca-a 25421095  T
Q  968 atcgtgaca 976  Q
    |||||||||    
T  25421096 atcgtgaca 25421104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 53; E-Value: 8e-21
Query Start/End: Original strand, 890 - 977
Target Start/End: Complemental strand, 6097877 - 6097790
Alignment:
Q  890 aaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtcgtttcttgggacggacgca-caatcgtgacac 977  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||  || |||||| ||||| ||||||||||||    
T  6097877 aaatcgtgacacgatttgcaaacttgctcgttaagtt-tccatgataaggactggtcgtacctggggacgtacgcaccaatcgtgacac 6097790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 759 - 864
Target Start/End: Original strand, 34151827 - 34151931
Alignment:
Q  759 ttgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagcta-ggt 857  Q
    |||||||| |||||||||||||||||||  ||||||||||||||||||||||||||| | ||| |||||||| |||||||| | ||||||||| || |||    
T  34151827 ttgttgag-tttgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattctgggatcgtgacgcgatttcg-gatgccgtgagttagggt 34151924  T
Q  858 tgcaggg 864  Q
    |||||||    
T  34151925 tgcaggg 34151931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 823 - 942
Target Start/End: Original strand, 14737128 - 14737246
Alignment:
Q  823 atcgtgacacgatttcgtggtgccgtgagctaggttgcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgtta 922  Q
    ||||||||||||||||  |  |||||||||||| |||||||  ||||||||||| ||||||  ||| ||||||||||||||||   ||||||||||||||    
T  14737128 atcgtgacacgatttcaagtggccgtgagctagtttgcaggacgccaaatcgtggcacgatcttggaaaatcgtgacacgattcagaaacttgctcgtta 14737227  T
Q  923 agttatccttgataaggact 942  Q
    || ||||  |||||||||||    
T  14737228 ag-tatcactgataaggact 14737246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 760 - 815
Target Start/End: Original strand, 16652716 - 16652770
Alignment:
Q  760 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacga 815  Q
    |||||||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  16652716 tgttgagatt-gtcttcaaatttgtggtctgaaagaacagggaaatcgtgacacga 16652770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 760 - 946
Target Start/End: Complemental strand, 16839331 - 16839146
Alignment:
Q  760 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggca-tcgtgacacgatttcgtggtgccgtgagctaggtt 858  Q
    |||||| | ||| ||||||||||||||| ||||||||||| | ||||||| | ||| ||||||| ||||||||||||   | | |||||||||| | |||    
T  16839331 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcgcga-tttggcaatcgtgacacgatcg-gagatgccgtgagccaagtt 16839234  T
Q  859 -gcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtc 946  Q
     || ||  || |||||||| ||||||  ||||||||||||||||||||   ||||||||| |||||| ||||  |||||||||||||||    
T  16839233 tgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaag-tatctctgataaggactggtc 16839146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 760 - 946
Target Start/End: Original strand, 33329932 - 33330117
Alignment:
Q  760 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggca-tcgtgacacgatttcgtggtgccgtgagctaggtt 858  Q
    |||||| | ||| ||||||||||||||| ||||||||||| | ||||||| | ||| ||||||| ||||||||||||   | | |||||||||| | |||    
T  33329932 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcgcga-tttggcaatcgtgacacgatcg-gagatgccgtgagccaagtt 33330029  T
Q  859 -gcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtc 946  Q
     || ||  || |||||||| ||||||  ||||||||||||||||||||   ||||||||| |||||| ||||  |||||||||||||||    
T  33330030 tgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaag-tatctctgataaggactggtc 33330117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 773 - 815
Target Start/End: Complemental strand, 5266641 - 5266599
Alignment:
Q  773 cttcaaatttgtggtctggaagaacagggaaatcgtgacacga 815  Q
    ||||||||||||||||||||||||||| |||||||||||||||    
T  5266641 cttcaaatttgtggtctggaagaacagagaaatcgtgacacga 5266599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 773 - 815
Target Start/End: Original strand, 14737097 - 14737139
Alignment:
Q  773 cttcaaatttgtggtctggaagaacagggaaatcgtgacacga 815  Q
    ||||||||||||||||||||||||||| |||||||||||||||    
T  14737097 cttcaaatttgtggtctggaagaacagagaaatcgtgacacga 14737139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 773 - 917
Target Start/End: Original strand, 31085958 - 31086101
Alignment:
Q  773 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggtt-gcagggtgccaaa 871  Q
    ||||||||||||||| | ||||||||| ||||||||||||||| ||   || |||| || ||||||  ||  | ||||||  |||| |||||||||  ||    
T  31085958 cttcaaatttgtggtttagaagaacagagaaatcgtgacacgatttcatcagcgtgtcatgatttccagg--cagtgagcatggtttgcagggtgctcaa 31086055  T
Q  872 tcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgct 917  Q
    ||||| ||||||| ||| ||| ||||||||||||| ||||||||||    
T  31086056 tcgtgtcacgattttggaaaaacgtgacacgattttcaaacttgct 31086101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 869 - 946
Target Start/End: Complemental strand, 5343956 - 5343880
Alignment:
Q  869 aaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtc 946  Q
    |||||||||||||||  ||||||||||||||||||||   ||||||||| |||||| ||||  |||||||||||||||    
T  5343956 aaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaag-tatctctgataaggactggtc 5343880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 857 - 946
Target Start/End: Original strand, 28155167 - 28155255
Alignment:
Q  857 ttgcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtc 946  Q
    ||||||||||| |||||||| ||||||  |||||||||||||||||||    ||||||||| |||||| ||||  |||||||||||||||    
T  28155167 ttgcagggtgcaaaatcgtggcacgatcttgggaaatcgtgacacgatccagaaacttgctggttaag-tatctctgataaggactggtc 28155255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 760 - 946
Target Start/End: Original strand, 33335429 - 33335614
Alignment:
Q  760 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggca-tcgtgacacgatttcgtggtgccgtgagctaggtt 858  Q
    |||||| | ||| ||||||||||||||| ||||||||||| | ||||||  | ||| ||||||| ||||||||||||   | | |||||||||| | |||    
T  33335429 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtttcgcga-tttggcaatcgtgacacgatcg-gagatgccgtgagccaagtt 33335526  T
Q  859 -gcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtc 946  Q
     || ||  || |||||||| ||||||  ||||||||||||||||||||   ||||||||| |||||| ||||  |||||||||||||||    
T  33335527 tgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaag-tatctctgataaggactggtc 33335614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 773 - 914
Target Start/End: Original strand, 5016981 - 5017121
Alignment:
Q  773 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagc-taggttgcagggtgccaaa 871  Q
    ||||||||||||||| |||||||||||  |||||||||||||| ||   || |||| |||||||||     || |||||| | | |||||||||||  ||    
T  5016981 cttcaaatttgtggtttggaagaacagaaaaatcgtgacacgatttcatcaacgtgtcacgatttc--caagcagtgagcatggtttgcagggtgctcaa 5017078  T
Q  872 tcgtgacacgattgtgggaaatcgtgacacgatttgcaaactt 914  Q
    ||||| ||||||| || |||| ||||||||||||| |||||||    
T  5017079 tcgtgtcacgattttgagaaaacgtgacacgattttcaaactt 5017121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 773 - 835
Target Start/End: Complemental strand, 5344052 - 5343990
Alignment:
Q  773 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgat 835  Q
    ||||||||||||||| ||| ||||||| ||||||||| ||||| || | ||||||||||||||    
T  5344052 cttcaaatttgtggtttgggagaacagagaaatcgtgtcacgatttggtcatcgtgacacgat 5343990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 758 - 946
Target Start/End: Complemental strand, 6006009 - 6005822
Alignment:
Q  758 tttgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggca-tcgtgacacgatttcgtggtgccgtgagctagg 856  Q
    |||||||| | ||| ||||||||||||||| ||||| ||||| | ||||||| | ||| ||||||| ||||||||||||   | | |||| ||||| | |    
T  6006009 tttgttgaaaattggcttcaaatttgtggtttggaaaaacagaggaatcgtgtcgcga-tttggcaatcgtgacacgatcg-gagatgccatgagccaag 6005912  T
Q  857 tt-gcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtc 946  Q
    || || ||  || |||||||| ||||||  ||||||||||||||||||||   ||||||||| |||||| ||||  |||||||||||||||    
T  6005911 tttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaag-tatctctgataaggactggtc 6005822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 773 - 815
Target Start/End: Original strand, 28155102 - 28155144
Alignment:
Q  773 cttcaaatttgtggtctggaagaacagggaaatcgtgacacga 815  Q
    ||||||||||||||||||||||||||| | |||||||||||||    
T  28155102 cttcaaatttgtggtctggaagaacagagcaatcgtgacacga 28155144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 861 - 906
Target Start/End: Complemental strand, 3809414 - 3809369
Alignment:
Q  861 agggtgccaaatcgtgacacgattgtgggaaatcgtgacacgattt 906  Q
    |||||||| ||||||||||||||| |||| || |||||||||||||    
T  3809414 agggtgcccaatcgtgacacgattttggggaaacgtgacacgattt 3809369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 861 - 906
Target Start/End: Complemental strand, 9183500 - 9183455
Alignment:
Q  861 agggtgccaaatcgtgacacgattgtgggaaatcgtgacacgattt 906  Q
    |||||| | ||||||||||||||| ||||||| |||||||||||||    
T  9183500 agggtgtccaatcgtgacacgattttgggaaaacgtgacacgattt 9183455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491 (Bit Score: 155; Significance: 1e-81; HSPs: 2)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 155; E-Value: 1e-81
Query Start/End: Original strand, 760 - 977
Target Start/End: Complemental strand, 9308 - 9092
Alignment:
Q  760 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggttg 859  Q
    |||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| | |||    
T  9308 tgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagctggtttg 9209  T
Q  860 cagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtcgtttcttgggacg 959  Q
    |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||  |||||||||    
T  9208 cagggtgccaaatcgtgacatgatt-tgggaaatcgtgacacgatttgcaaacttgctcgttaagtt-tccatgataaggactggtcgtaccttgggacg 9111  T
Q  960 gacgca-caatcgtgacac 977  Q
     ||||| ||||||||||||    
T  9110 tacgcaccaatcgtgacac 9092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491; HSP #2
Raw Score: 152; E-Value: 6e-80
Query Start/End: Original strand, 759 - 977
Target Start/End: Complemental strand, 11754 - 11537
Alignment:
Q  759 ttgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggtt 858  Q
    ||||||||||||| ||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| || ||||||||||| | ||    
T  11754 ttgttgagatttggcttcaaaattgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgatttcatgatgccgtgagctggttt 11655  T
Q  859 gcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtcgtttcttgggac 958  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||  ||||||||    
T  11654 gcagggtgccaaatcgtgacacgatt-tgggaaatcgtgacacgatttgcaaacttgctcgttaagtt-tccatgataaggactggtcgtaccttgggac 11557  T
Q  959 ggacgca-caatcgtgacac 977  Q
    | ||||| ||||||||||||    
T  11556 gtacgcaccaatcgtgacac 11537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 155; Significance: 1e-81; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 155; E-Value: 1e-81
Query Start/End: Original strand, 760 - 966
Target Start/End: Original strand, 2627318 - 2627523
Alignment:
Q  760 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggttg 859  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| | |||    
T  2627318 tgttgagatttggcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtgattccgtgagctggtttg 2627417  T
Q  860 cagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtcgtttcttgggacg 959  Q
    || |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||||||| ||||    
T  2627418 catggtgccaaatcgtgacacgattttgggaaatcgtgacacgatttgcaaacttgctcgttaagtt-tccatgataaggattggtcgtttcttgtgacg 2627516  T
Q  960 gacgcac 966  Q
     ||||||    
T  2627517 tacgcac 2627523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 133; E-Value: 1e-68
Query Start/End: Original strand, 760 - 956
Target Start/End: Original strand, 3439088 - 3439281
Alignment:
Q  760 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggttg 859  Q
    |||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||| | ||||||||||||||||||||| |||||||||||||||||||    
T  3439088 tgttgagatt-gtcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattgtggcatcgtgacacgatttcggggtgccgtgagctaggttg 3439186  T
Q  860 cagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtcgtttcttggg 956  Q
    |||||||| |||||||||||||||| |||||||||||||||||||    |||||||||||||||| |||||||||||||||||||||||||||||||    
T  3439187 cagggtgcaaaatcgtgacacgatt-tgggaaatcgtgacacgatcgtgaaacttgctcgttaag-tatccttgataaggactggtcgtttcttggg 3439281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 131; E-Value: 2e-67
Query Start/End: Original strand, 760 - 946
Target Start/End: Original strand, 1261414 - 1261599
Alignment:
Q  760 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggttg 859  Q
    |||||| |||||  |||||||||||||| ||||||||||  ||||||| ||||||||||||||||||||||||||||||||| ||||||||||||| |||    
T  1261414 tgttgatatttggtttcaaatttgtggtttggaagaacacagaaatcgcgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagctagtttg 1261513  T
Q  860 cagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtc 946  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||    
T  1261514 cagggtgccaaatcgtgacacgatcttgggaaatcgtgacacgattttcaaacttgctcgttaag-tatccttgataaggactggtc 1261599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 126; E-Value: 2e-64
Query Start/End: Original strand, 759 - 948
Target Start/End: Complemental strand, 26288518 - 26288330
Alignment:
Q  759 ttgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggtt 858  Q
    ||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| ||| ||||||||||| | ||    
T  26288518 ttgttgagacttgacttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacatgattttgtgatgccgtgagctggttt 26288419  T
Q  859 gcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtcgt 948  Q
    |||||||||||||||||||||| ||  |||||||||||||||| |||| ||||||||||||||||||| ||| |||||||||||||||||    
T  26288418 gcagggtgccaaatcgtgacacaatcttgggaaatcgtgacacaattttcaaacttgctcgttaagtt-tccatgataaggactggtcgt 26288330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 126; E-Value: 2e-64
Query Start/End: Original strand, 759 - 948
Target Start/End: Complemental strand, 26301775 - 26301587
Alignment:
Q  759 ttgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggtt 858  Q
    ||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| ||| ||||||||||| | ||    
T  26301775 ttgttgagacttgacttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacatgattttgtgatgccgtgagctggttt 26301676  T
Q  859 gcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtcgt 948  Q
    |||||||||||||||||||||| ||  |||||||||||||||| |||| ||||||||||||||||||| ||| |||||||||||||||||    
T  26301675 gcagggtgccaaatcgtgacacaatcttgggaaatcgtgacacaattttcaaacttgctcgttaagtt-tccatgataaggactggtcgt 26301587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 126; E-Value: 2e-64
Query Start/End: Original strand, 759 - 948
Target Start/End: Complemental strand, 26313769 - 26313581
Alignment:
Q  759 ttgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggtt 858  Q
    ||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| ||| ||||||||||| | ||    
T  26313769 ttgttgagacttgacttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacatgattttgtgatgccgtgagctggttt 26313670  T
Q  859 gcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtcgt 948  Q
    |||||||||||||||||||||| ||  |||||||||||||||| |||| ||||||||||||||||||| ||| |||||||||||||||||    
T  26313669 gcagggtgccaaatcgtgacacaatcttgggaaatcgtgacacaattttcaaacttgctcgttaagtt-tccatgataaggactggtcgt 26313581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 125; E-Value: 8e-64
Query Start/End: Original strand, 773 - 977
Target Start/End: Original strand, 4759546 - 4759748
Alignment:
Q  773 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggttgcagggtgccaaat 872  Q
    ||||||||||||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||| ||||||||||||||| |||||||  |||||||    
T  4759546 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttcgaggtgccgtgagctagtttgcaggacgccaaat 4759645  T
Q  873 cgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtcgtttcttgggacggacgcacaatcgt 972  Q
    |||| ||||||  |||||||||||||||||||||  |||||||||||||||| ||||||||||||||||||||| |  ||||| ||||||||| ||||||    
T  4759646 cgtggcacgatcttgggaaatcgtgacacgatttagaaacttgctcgttaag-tatccttgataaggactggtcataccttggaacggacgca-aatcgt 4759743  T
Q  973 gacac 977  Q
    |||||    
T  4759744 gacac 4759748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 117; E-Value: 5e-59
Query Start/End: Original strand, 773 - 977
Target Start/End: Original strand, 33037299 - 33037501
Alignment:
Q  773 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggttgcagggtgccaaat 872  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||  |||||||    
T  33037299 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagctagtttgcaggacgccaaat 33037398  T
Q  873 cgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtcgtttcttgggacggacgcacaatcgt 972  Q
    |||||||||||  ||||||||||||||||||||   |||||||||| ||||| ||||  ||||||||||||||| |  ||||| ||||||||| ||||||    
T  33037399 cgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctcattaag-tatcactgataaggactggtcatgccttggaacggacgca-aatcgt 33037496  T
Q  973 gacac 977  Q
    |||||    
T  33037497 gacac 33037501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 114; E-Value: 3e-57
Query Start/End: Original strand, 773 - 946
Target Start/End: Complemental strand, 30656270 - 30656098
Alignment:
Q  773 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggttgcagggtgccaaat 872  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||  ||||||||||||||| |||||||  |||||||    
T  30656270 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgccgtgagctagtttgcaggacgccaaat 30656171  T
Q  873 cgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtc 946  Q
    |||| ||||||  ||||||||||||||||||||   |||||||||||||||| |||||||||||||||||||||    
T  30656170 cgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaag-tatccttgataaggactggtc 30656098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 106; E-Value: 2e-52
Query Start/End: Original strand, 773 - 946
Target Start/End: Original strand, 10683751 - 10683923
Alignment:
Q  773 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggttgcagggtgccaaat 872  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||  ||||||||||||||| |||||||  |||||||    
T  10683751 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgccgtgagctagtttgcaggacgccaaat 10683850  T
Q  873 cgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtc 946  Q
    |||| ||||||  ||||||||||||||||||||   |||||||||||||||| ||||  |||||||||||||||    
T  10683851 cgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaag-tatctctgataaggactggtc 10683923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 106; E-Value: 2e-52
Query Start/End: Original strand, 773 - 946
Target Start/End: Complemental strand, 36980002 - 36979830
Alignment:
Q  773 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggttgcagggtgccaaat 872  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||  |||||||    
T  36980002 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagctagtttgcaggacgccaaat 36979903  T
Q  873 cgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtc 946  Q
    |||| ||||||  ||| ||||||||||||||||   |||||||||||||||| ||||  |||||||||||||||    
T  36979902 cgtggcacgatcttggaaaatcgtgacacgattcagaaacttgctcgttaag-tatctctgataaggactggtc 36979830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 105; E-Value: 7e-52
Query Start/End: Original strand, 760 - 884
Target Start/End: Original strand, 31042908 - 31043032
Alignment:
Q  760 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggttg 859  Q
    |||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||    
T  31042908 tgttgagatttgacttcaaatttgtggtctggaagaatagagaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctggtttg 31043007  T
Q  860 cagggtgccaaatcgtgacacgatt 884  Q
    |||||||||||||||||||||||||    
T  31043008 cagggtgccaaatcgtgacacgatt 31043032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 104; E-Value: 3e-51
Query Start/End: Original strand, 760 - 977
Target Start/End: Original strand, 15290143 - 15290358
Alignment:
Q  760 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagcta-ggtt 858  Q
    |||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| ||||| || | |||||||||||| | ||||||||| || ||||    
T  15290143 tgttgagatt-gtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttgggattgcgacacgatttcg-gatgccgtgagttagggtt 15290240  T
Q  859 gcagggtgccaaatcgtgacacgattgtggg-aaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtcgtttcttggga 957  Q
    ||||||   ||||||||||||||||| |||| |||||||||||||||    |||||||||||||||| |||||||||||||||||||| ||| |||||||    
T  15290241 gcaggggtgcaaatcgtgacacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaag-tatccttgataaggactggtagttccttggga 15290339  T
Q  958 cggacgcacaatcgtgacac 977  Q
    |||||||| |||||||||||    
T  15290340 cggacgca-aatcgtgacac 15290358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 104; E-Value: 3e-51
Query Start/End: Original strand, 760 - 977
Target Start/End: Original strand, 15470512 - 15470727
Alignment:
Q  760 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagcta-ggtt 858  Q
    |||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| ||||| || | |||||||||||| | ||||||||| || ||||    
T  15470512 tgttgagatt-gtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttgggattgcgacacgatttcg-gatgccgtgagttagggtt 15470609  T
Q  859 gcagggtgccaaatcgtgacacgattgtggg-aaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtcgtttcttggga 957  Q
    ||||||   ||||||||||||||||| |||| |||||||||||||||    |||||||||||||||| |||||||||||||||||||| ||| |||||||    
T  15470610 gcaggggtgcaaatcgtgacacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaag-tatccttgataaggactggtagttccttggga 15470708  T
Q  958 cggacgcacaatcgtgacac 977  Q
    |||||||| |||||||||||    
T  15470709 cggacgca-aatcgtgacac 15470727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 104; E-Value: 3e-51
Query Start/End: Original strand, 760 - 977
Target Start/End: Complemental strand, 42575909 - 42575694
Alignment:
Q  760 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagcta-ggtt 858  Q
    |||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| ||||| |||| |||||||||||| | ||||||||| || ||||    
T  42575909 tgttgagatt-gtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttgggatcgcgacacgatttcg-gatgccgtgagttagggtt 42575812  T
Q  859 gcagggtgccaaatcgtgacacgattgtggg-aaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtcgtttcttggga 957  Q
    ||||||   ||||||||| ||||||| |||| |||||||||||||||    |||||||||||||||| ||||||||||||||||||||| || |||||||    
T  42575811 gcaggggtgcaaatcgtgtcacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaag-tatccttgataaggactggtctttccttggga 42575713  T
Q  958 cggacgcacaatcgtgacac 977  Q
    |||||||| |||||||||||    
T  42575712 cggacgca-aatcgtgacac 42575694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 102; E-Value: 4e-50
Query Start/End: Original strand, 773 - 946
Target Start/End: Original strand, 18852639 - 18852811
Alignment:
Q  773 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggttgcagggtgccaaat 872  Q
    ||||||||||||||||||||||||||| |||||||||| |||| ||||||||||||||||||||||  ||||||||||||||| |||||||  |||||||    
T  18852639 cttcaaatttgtggtctggaagaacagagaaatcgtgatacgattttggcatcgtgacacgatttcaaggtgccgtgagctagtttgcaggacgccaaat 18852738  T
Q  873 cgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtc 946  Q
    |||| ||||||  ||||||||||||||||||||   |||||||||||||||| ||||  |||||||||||||||    
T  18852739 cgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaag-tatcactgataaggactggtc 18852811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 97; E-Value: 4e-47
Query Start/End: Original strand, 773 - 925
Target Start/End: Complemental strand, 6311923 - 6311771
Alignment:
Q  773 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggttgcagggtgccaaat 872  Q
    ||||||||||||||||||||||||||| |||||| |||||||| ||||||||||||||||||||||  ||||||||||||||| |||||||  |||||||    
T  6311923 cttcaaatttgtggtctggaagaacagagaaatcatgacacgattttggcatcgtgacacgatttcaaggtgccgtgagctagtttgcaggacgccaaat 6311824  T
Q  873 cgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagt 925  Q
    |||| ||||||  ||||||||||||||||||||   |||||||||||||||||    
T  6311823 cgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagt 6311771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 94; E-Value: 3e-45
Query Start/End: Original strand, 773 - 946
Target Start/End: Original strand, 18870033 - 18870205
Alignment:
Q  773 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggttgcagggtgccaaat 872  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||  | || |||||||||| |||||||  |||||||    
T  18870033 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagatgtcgtgagctagtttgcaggacgccaaat 18870132  T
Q  873 cgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtc 946  Q
    |||| ||||||  ||||||||||||||||||||   |||||||||||||||| ||||  | |||||||||||||    
T  18870133 cgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaag-tatcactaataaggactggtc 18870205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 91; E-Value: 2e-43
Query Start/End: Original strand, 760 - 926
Target Start/End: Complemental strand, 7412952 - 7412786
Alignment:
Q  760 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggttg 859  Q
    |||||| ||||| ||||||||||||||| ||||||||||| ||||||||||||||| ||||||||||||||||||||  ||  ||||||||||| | |||    
T  7412952 tgttgaaatttgacttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattctgtaatgccgtgagctggtttg 7412853  T
Q  860 cagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagtt 926  Q
    ||||||| |||||||||  || ||| || |||||||||||||||||| |||||||||| ||||||||    
T  7412852 cagggtgtcaaatcgtggtacaattttgtgaaatcgtgacacgattttcaaacttgctggttaagtt 7412786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 87; E-Value: 4e-41
Query Start/End: Original strand, 773 - 942
Target Start/End: Original strand, 7289439 - 7289608
Alignment:
Q  773 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttc-gtggtgccgtgagctaggttgcagggtgccaaa 871  Q
    ||||||||||||||||||||||||||| ||||| ||||||||| ||||||||||||||||||||||   || ||| |||||||| |||||||  ||||||    
T  7289439 cttcaaatttgtggtctggaagaacagagaaatagtgacacgattttggcatcgtgacacgatttcaagggagccatgagctagtttgcaggacgccaaa 7289538  T
Q  872 tcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggact 942  Q
    ||||||||||||  ||| ||||||||||||||||   |||||||||||||||| ||||| |||||||||||    
T  7289539 tcgtgacacgatcttggaaaatcgtgacacgattcagaaacttgctcgttaag-tatccctgataaggact 7289608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 85; E-Value: 6e-40
Query Start/End: Original strand, 823 - 955
Target Start/End: Original strand, 25689604 - 25689734
Alignment:
Q  823 atcgtgacacgatttcgtggtgccgtgagctaggttgcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgtta 922  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| |||||||    ||||||||||||||    
T  25689604 atcgtgacacgatttcg-ggtgccgtgagctaggttgcagggtgcaaaatcgtggcacgattgtgggaaatcgtcacacgatcgtgaaacttgctcgtta 25689702  T
Q  923 agttatccttgataaggactggtcgtttcttgg 955  Q
    || |||||||||||||||||||||||| |||||    
T  25689703 ag-tatccttgataaggactggtcgttccttgg 25689734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 78; E-Value: 9e-36
Query Start/End: Original strand, 773 - 942
Target Start/End: Original strand, 25327676 - 25327844
Alignment:
Q  773 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggttgcagggtgccaaat 872  Q
    ||||||||||||||||||||||||||| ||||||||||||||| |||||| ||||| |||||||||  |  || ||||||||| |||||||  |||||||    
T  25327676 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcttcgtggcacgatttcaagtggctgtgagctagtttgcaggacgccaaat 25327775  T
Q  873 cgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggact 942  Q
    | || ||||||  ||||||||||||||||||||   |||||||||||||||| ||||  |||||||||||    
T  25327776 catggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaag-tatcactgataaggact 25327844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 773 - 946
Target Start/End: Original strand, 39784337 - 39784509
Alignment:
Q  773 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgag-ctaggttgcagggtgccaaa 871  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||| |||||||||||| || | ||||||||||| | || |||| || ||| |||    
T  39784337 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacacga-ttggaggtgccgtgagccaagtttgctggatgcaaaa 39784435  T
Q  872 tcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtc 946  Q
    ||||| ||||||  ||||||||||||||||||||   ||||||| | |||||| ||||  |||||||||||||||    
T  39784436 tcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgttggttaag-tatcactgataaggactggtc 39784509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 823 - 925
Target Start/End: Original strand, 10688661 - 10688763
Alignment:
Q  823 atcgtgacacgatttcgtggtgccgtgagctaggttgcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgtta 922  Q
    ||||||||||||||||  ||||||||||||||| |||||||  ||||||||||| ||||||  ||||||||||||||||||||   ||||||||||||||    
T  10688661 atcgtgacacgatttcaaggtgccgtgagctagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgtta 10688760  T
Q  923 agt 925  Q
    |||    
T  10688761 agt 10688763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 759 - 815
Target Start/End: Original strand, 25689560 - 25689615
Alignment:
Q  759 ttgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacga 815  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  25689560 ttgttgagatt-gtcttcaaatttgtggtctggaagaacagagaaatcgtgacacga 25689615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 773 - 815
Target Start/End: Original strand, 10688630 - 10688672
Alignment:
Q  773 cttcaaatttgtggtctggaagaacagggaaatcgtgacacga 815  Q
    ||||||||||||||||||||||||||| |||||||||||||||    
T  10688630 cttcaaatttgtggtctggaagaacagagaaatcgtgacacga 10688672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 760 - 946
Target Start/End: Complemental strand, 35745979 - 35745794
Alignment:
Q  760 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggca-tcgtgacacgatttcgtggtgccgtgagctaggtt 858  Q
    |||||| | ||| ||||||||||||||| ||||||||||| | ||||||| | ||| ||||||| ||||||||||||   | | |||||||||| | |||    
T  35745979 tgttgaaaattggcttcaaatttgtggtttggaagaacagaggaatcgtgtcgcga-tttggcaatcgtgacacgatcg-gagatgccgtgagccaagtt 35745882  T
Q  859 -gcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtc 946  Q
     |  ||  || |||||||| ||||||  ||||||||||||||||||||   ||||||||| |||||| ||||  |||||||||||||||    
T  35745881 tgttggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaag-tatctatgataaggactggtc 35745794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 773 - 815
Target Start/End: Original strand, 5701964 - 5702006
Alignment:
Q  773 cttcaaatttgtggtctggaagaacagggaaatcgtgacacga 815  Q
    ||||||||||||||| ||||||||||| |||||||||||||||    
T  5701964 cttcaaatttgtggtttggaagaacagagaaatcgtgacacga 5702006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 857 - 906
Target Start/End: Original strand, 15212460 - 15212509
Alignment:
Q  857 ttgcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgattt 906  Q
    |||||||||| | ||||||||||||||| ||||||| |||||||||||||    
T  15212460 ttgcagggtgtccaatcgtgacacgattttgggaaaacgtgacacgattt 15212509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 870 - 906
Target Start/End: Complemental strand, 1746700 - 1746664
Alignment:
Q  870 aatcgtgacacgattgtgggaaatcgtgacacgattt 906  Q
    ||||||||||||||| |||||||||||||||||||||    
T  1746700 aatcgtgacacgattttgggaaatcgtgacacgattt 1746664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 857 - 917
Target Start/End: Original strand, 5702049 - 5702109
Alignment:
Q  857 ttgcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgct 917  Q
    |||||||||||  ||||||| ||||||| ||| ||| ||||||||||||| ||||||||||    
T  5702049 ttgcagggtgctcaatcgtgtcacgattttggaaaaacgtgacacgattttcaaacttgct 5702109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 870 - 906
Target Start/End: Complemental strand, 34256986 - 34256950
Alignment:
Q  870 aatcgtgacacgattgtgggaaatcgtgacacgattt 906  Q
    ||||||||||||||| |||||||||||||||||||||    
T  34256986 aatcgtgacacgattttgggaaatcgtgacacgattt 34256950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 823 - 906
Target Start/End: Original strand, 43036062 - 43036146
Alignment:
Q  823 atcgtgacacgatttcgtggtgccgtgagctaggtt-gcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgattt 906  Q
    |||||||||||||||||   ||||||||||  | || |||||||| | ||||||||||||||| ||| ||| |||||||||||||    
T  43036062 atcgtgacacgatttcgcaatgccgtgagcatgttttgcagggtgtccaatcgtgacacgattttggaaaaacgtgacacgattt 43036146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 768 - 815
Target Start/End: Complemental strand, 4456625 - 4456578
Alignment:
Q  768 tttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacga 815  Q
    |||| ||||||||||||||| ||||||||||  |||||||||||||||    
T  4456625 tttggcttcaaatttgtggtttggaagaacaaagaaatcgtgacacga 4456578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 868 - 906
Target Start/End: Complemental strand, 6311734 - 6311696
Alignment:
Q  868 caaatcgtgacacgattgtgggaaatcgtgacacgattt 906  Q
    |||||||||||||||||||||||||||||| ||| ||||    
T  6311734 caaatcgtgacacgattgtgggaaatcgtggcacaattt 6311696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 868 - 906
Target Start/End: Original strand, 10688800 - 10688838
Alignment:
Q  868 caaatcgtgacacgattgtgggaaatcgtgacacgattt 906  Q
    |||||||||||||||||||||||||||||| ||| ||||    
T  10688800 caaatcgtgacacgattgtgggaaatcgtggcacaattt 10688838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 860 - 906
Target Start/End: Original strand, 22975993 - 22976039
Alignment:
Q  860 cagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgattt 906  Q
    ||||||| | ||||||||||||||| ||||||| |||||||||||||    
T  22975993 cagggtgtccaatcgtgacacgattttgggaaaacgtgacacgattt 22976039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 857 - 906
Target Start/End: Original strand, 30143016 - 30143065
Alignment:
Q  857 ttgcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgattt 906  Q
    |||||||||| | ||||||||||||||| |||||||  ||||||||||||    
T  30143016 ttgcagggtgtccaatcgtgacacgattttgggaaaatgtgacacgattt 30143065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 857 - 906
Target Start/End: Complemental strand, 42435703 - 42435654
Alignment:
Q  857 ttgcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgattt 906  Q
    |||||||||| | ||||||||||||||| |||| || |||||||||||||    
T  42435703 ttgcagggtgtccaatcgtgacacgattttggggaaacgtgacacgattt 42435654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 142; Significance: 6e-74; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 142; E-Value: 6e-74
Query Start/End: Original strand, 759 - 948
Target Start/End: Original strand, 17430 - 17618
Alignment:
Q  759 ttgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggtt 858  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| | ||    
T  17430 ttgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagctggttt 17529  T
Q  859 gcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtcgt 948  Q
    |||||||||||||||||||||||||  ||||||||||||||| ||||| ||||||||||||||||| ||||||||||||||| |||||||    
T  17530 gcagggtgccaaatcgtgacacgatcttgggaaatcgtgacatgattttcaaacttgctcgttaag-tatccttgataaggattggtcgt 17618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 127; Significance: 5e-65; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 127; E-Value: 5e-65
Query Start/End: Original strand, 760 - 977
Target Start/End: Complemental strand, 3185 - 2971
Alignment:
Q  760 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagcta-ggtt 858  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| | |||||||||||| ||||    
T  3185 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttgggatcgtgacacgatttcg-gatgccgtgagctagggtt 3088  T
Q  859 gcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtcgtttcttgggac 958  Q
    ||||||   ||||||||| |||||||||||||||||||||||||||    |||||||||||||||| ||| |||||||||||||||||||| ||||||||    
T  3087 gcaggggtgcaaatcgtggcacgattgtgggaaatcgtgacacgatccagaaacttgctcgttaag-tattcttgataaggactggtcgttccttgggac 2989  T
Q  959 ggacgcacaatcgtgacac 977  Q
    ||||||| |||||||||||    
T  2988 ggacgca-aatcgtgacac 2971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0674 (Bit Score: 124; Significance: 3e-63; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 124; E-Value: 3e-63
Query Start/End: Original strand, 760 - 978
Target Start/End: Complemental strand, 4310 - 4095
Alignment:
Q  760 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagcta-ggtt 858  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||| ||||| |||||||||||||||   |||||||||||||| ||||    
T  4310 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgccacgattttggaatcgtgacacgattt-taggtgccgtgagctagggtt 4213  T
Q  859 gcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtcgtttcttgggac 958  Q
    ||||||   ||||||||| |||||||||||||||||||||||||||    |||||||||||||||| |||||||||||||||||||||||| ||||||||    
T  4212 gcaggggtgcaaatcgtggcacgattgtgggaaatcgtgacacgatccagaaacttgctcgttaag-tatccttgataaggactggtcgttccttgggac 4114  T
Q  959 ggacgcacaatcgtgacaca 978  Q
    ||||||| ||||||||||||    
T  4113 ggacgca-aatcgtgacaca 4095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 116; Significance: 2e-58; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 755 - 977
Target Start/End: Original strand, 21934 - 22156
Alignment:
Q  755 ctttttgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagcta 854  Q
    |||| ||||||||||||  |||||||||||||||||||||||||| ||||||| |||| |||||||||||||||||||||||||| ||||||||||||||    
T  21934 ctttctgttgagatttggtttcaaatttgtggtctggaagaacagagaaatcgggacatgaatttggcatcgtgacacgatttcgaggtgccgtgagcta 22033  T
Q  855 ggttgcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtcgtttcttg 954  Q
    | |||||||  ||||||||||||||||||  ||||||||||||||||||||   |||||||||||||||| ||||  |||||||||| ||||||  ||||    
T  22034 gtttgcaggacgccaaatcgtgacacgatcttgggaaatcgtgacacgattgtaaaacttgctcgttaag-tatcactgataaggacaggtcgtaccttg 22132  T
Q  955 ggacggacgca-caatcgtgacac 977  Q
     |||| ||| | ||||||||||||    
T  22133 tgacgtacgtaccaatcgtgacac 22156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 112; Significance: 5e-56; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 112; E-Value: 5e-56
Query Start/End: Original strand, 760 - 977
Target Start/End: Original strand, 5859 - 6074
Alignment:
Q  760 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagcta-ggtt 858  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||| |||||  ||||||||||| || | |||||||||||||| ||||    
T  5859 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgccacgattttggagtcgtgacacga-ttggaggtgccgtgagctagggtt 5956  T
Q  859 gcagggtgccaaatcgtgacacgattgtgg-gaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtcgtttcttggga 957  Q
    ||||||||| || ||||| |||||||||||  |||||||||||||||    |||||||||||||||| |||||||||||||||||||||||| |||||||    
T  5957 gcagggtgcaaattcgtgtcacgattgtggcaaaatcgtgacacgatcgtgaaacttgctcgttaag-tatccttgataaggactggtcgttccttggga 6055  T
Q  958 cggacgcacaatcgtgacac 977  Q
    |||||||| |||||||||||    
T  6056 cggacgca-aatcgtgacac 6074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1519 (Bit Score: 96; Significance: 2e-46; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 96; E-Value: 2e-46
Query Start/End: Original strand, 801 - 948
Target Start/End: Original strand, 523 - 669
Alignment:
Q  801 gaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggttgcagggtgccaaatcgtgacacgattgtgggaaatcgtgaca 900  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||  || | ||||||||||    
T  523 gaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagctagtttgcagggtgccaaatcgtgacacgatcttgaggaatcgtgaca 622  T
Q  901 cgatttgcaaacttgctcgttaagttatccttgataaggactggtcgt 948  Q
    |||||| |||| |||||||||||||| |||  |||| |||||||||||    
T  623 cgattttcaaatttgctcgttaagtt-tccaggatagggactggtcgt 669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 93; Significance: 1e-44; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 93; E-Value: 1e-44
Query Start/End: Original strand, 760 - 884
Target Start/End: Original strand, 7911 - 8035
Alignment:
Q  760 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggttg 859  Q
    |||||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| ||| ||||||||| | | |||    
T  7911 tgttgagatttggcttcaaatttgtggtctgaaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgatgccgtgagttggtttg 8010  T
Q  860 cagggtgccaaatcgtgacacgatt 884  Q
    |||||||||||||||||||||||||    
T  8011 cagggtgccaaatcgtgacacgatt 8035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 91; Significance: 2e-43; HSPs: 3)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 91; E-Value: 2e-43
Query Start/End: Original strand, 760 - 926
Target Start/End: Original strand, 132752 - 132918
Alignment:
Q  760 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggttg 859  Q
    |||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| | ||| |||||| |||||||| ||| || |||||||| | |||    
T  132752 tgttgagatttgtcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattgtggtatcgtggcacgattttgtgatgtcgtgagctggtttg 132851  T
Q  860 cagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagtt 926  Q
    ||| ||| ||||||||||||||||| || | |||||||||| ||||| |||||||||| ||||||||    
T  132852 cagtgtgtcaaatcgtgacacgattttgtggaatcgtgacatgattttcaaacttgctggttaagtt 132918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 773 - 815
Target Start/End: Complemental strand, 6297 - 6255
Alignment:
Q  773 cttcaaatttgtggtctggaagaacagggaaatcgtgacacga 815  Q
    ||||||||||||||| ||||||||||| |||||||||||||||    
T  6297 cttcaaatttgtggtttggaagaacagagaaatcgtgacacga 6255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #3
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 773 - 815
Target Start/End: Complemental strand, 3105 - 3063
Alignment:
Q  773 cttcaaatttgtggtctggaagaacagggaaatcgtgacacga 815  Q
    ||||||||||||||| ||||||||||| |||||| ||||||||    
T  3105 cttcaaatttgtggtttggaagaacagagaaatcatgacacga 3063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355 (Bit Score: 82; Significance: 4e-38; HSPs: 1)
Name: scaffold0355
Description:

Target: scaffold0355; HSP #1
Raw Score: 82; E-Value: 4e-38
Query Start/End: Original strand, 773 - 942
Target Start/End: Original strand, 3349 - 3517
Alignment:
Q  773 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggttgcagggtgccaaat 872  Q
    |||||||||||||||||||||||| || ||||||||||||||| |||| |||||||||||||||||  |  |||||||||||| ||| |||  |||||||    
T  3349 cttcaaatttgtggtctggaagaaaagagaaatcgtgacacgattttgacatcgtgacacgatttcaagtggccgtgagctagtttgaaggacgccaaat 3448  T
Q  873 cgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggact 942  Q
    |||| ||||||  ||||||||||||||||||||   |||||||||||||||| ||||  |||||||||||    
T  3449 cgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaag-tatcaatgataaggact 3517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0510 (Bit Score: 75; Significance: 6e-34; HSPs: 1)
Name: scaffold0510
Description:

Target: scaffold0510; HSP #1
Raw Score: 75; E-Value: 6e-34
Query Start/End: Original strand, 760 - 926
Target Start/End: Original strand, 1083 - 1249
Alignment:
Q  760 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggttg 859  Q
    |||||| ||||| ||||||||||||||| || ||||||||  |||||||||||||| ||||||||||||||||||||| ||  |  |||||| | | |||    
T  1083 tgttgaaatttgccttcaaatttgtggtttgaaagaacagaaaaatcgtgacacgattttggcatcgtgacacgattttgtaatatcgtgagttggtttg 1182  T
Q  860 cagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagtt 926  Q
    ||||||| |||||||||  |||||| || ||||||||||||||||||  ||||||||| ||||||||    
T  1183 cagggtgtcaaatcgtggtacgattttgtgaaatcgtgacacgatttttaaacttgctggttaagtt 1249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135 (Bit Score: 74; Significance: 2e-33; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 773 - 942
Target Start/End: Original strand, 34566 - 34734
Alignment:
Q  773 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggttgcagggtgccaaat 872  Q
    ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| |||||  |  ||||| || | | ||||| |  |||||||    
T  34566 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacactatttcaagtggccgttagtttgtttgcatgacgccaaat 34665  T
Q  873 cgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggact 942  Q
    |||| ||||||  ||||||||||||||||||||   |||||||||||||||| ||||  |||||||||||    
T  34666 cgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaag-tatcactgataaggact 34734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 73; Significance: 9e-33; HSPs: 2)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 73; E-Value: 9e-33
Query Start/End: Original strand, 758 - 926
Target Start/End: Original strand, 43432 - 43600
Alignment:
Q  758 tttgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctaggt 857  Q
    |||||||  ||||| |||||||||| |||| |||||||| || ||||||||||||||| | ||||||||||||||||||| ||  || |||||||| | |    
T  43432 tttgttggaatttggcttcaaatttatggtttggaagaatagagaaatcgtgacacgattgtggcatcgtgacacgattttgtaatgtcgtgagctggtt 43531  T
Q  858 tgcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagtt 926  Q
    | ||||||| |||||||||  |||||| || |||||||||||| ||||| |||||||||| ||||||||    
T  43532 tacagggtgtcaaatcgtggtacgattttgtgaaatcgtgacatgattttcaaacttgctggttaagtt 43600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087; HSP #2
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 759 - 820
Target Start/End: Original strand, 36323 - 36384
Alignment:
Q  759 ttgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttg 820  Q
    ||||||| | ||| ||||||||||||||| ||||||||||| |||||| ||| |||| ||||    
T  36323 ttgttgaaaattggcttcaaatttgtggtttggaagaacagagaaatcatgatacgattttg 36384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 71; Significance: 1e-31; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 773 - 946
Target Start/End: Complemental strand, 933 - 761
Alignment:
Q  773 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgag-ctaggttgcagggtgccaaa 871  Q
    ||||||||||||||| ||||||||||| ||||||||||||||| ||||| |||||||||||| || | ||||||||||| | || |||| || ||| |||    
T  933 cttcaaatttgtggtatggaagaacagagaaatcgtgacacgattttggaatcgtgacacga-ttggaggtgccgtgagccaagtttgctggatgcaaaa 835  T
Q  872 tcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtc 946  Q
    ||||| ||||||  ||||||||||||||||||||   ||||||||| |||||| ||||  |||||||||||||||    
T  834 tcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaag-tatctctgataaggactggtc 761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1455 (Bit Score: 52; Significance: 3e-20; HSPs: 1)
Name: scaffold1455
Description:

Target: scaffold1455; HSP #1
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 773 - 836
Target Start/End: Original strand, 1721 - 1784
Alignment:
Q  773 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatt 836  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||    
T  1721 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacacgatt 1784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0665 (Bit Score: 48; Significance: 7e-18; HSPs: 2)
Name: scaffold0665
Description:

Target: scaffold0665; HSP #1
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 823 - 942
Target Start/End: Complemental strand, 8230 - 8112
Alignment:
Q  823 atcgtgacacgatttcgtggtgccgtgagctaggttgcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgtta 922  Q
    ||||||||||||||||  |  |||||||||||| |||||||  ||||||||||| ||||||  ||| ||||||||||||||||   ||||||||||||||    
T  8230 atcgtgacacgatttcaagtggccgtgagctagtttgcaggacgccaaatcgtggcacgatcttggaaaatcgtgacacgattcagaaacttgctcgtta 8131  T
Q  923 agttatccttgataaggact 942  Q
    || ||||  |||||||||||    
T  8130 ag-tatcactgataaggact 8112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0665; HSP #2
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 773 - 815
Target Start/End: Complemental strand, 8261 - 8219
Alignment:
Q  773 cttcaaatttgtggtctggaagaacagggaaatcgtgacacga 815  Q
    ||||||||||||||||||||||||||| |||||||||||||||    
T  8261 cttcaaatttgtggtctggaagaacagagaaatcgtgacacga 8219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 44; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 823 - 926
Target Start/End: Complemental strand, 45760 - 45657
Alignment:
Q  823 atcgtgacacgatttcgtggtgccgtgagctaggttgcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgtta 922  Q
    |||||||||| |||| ||  || ||||||||   |||||||||| ||||||||| ||||||| || |||||||||||||||||| |||||||||| | ||    
T  45760 atcgtgacacaattttgtaatgtcgtgagctgatttgcagggtgtcaaatcgtggcacgattctgtgaaatcgtgacacgattttcaaacttgctggcta 45661  T
Q  923 agtt 926  Q
    ||||    
T  45660 agtt 45657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098; HSP #2
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 758 - 813
Target Start/End: Complemental strand, 45806 - 45751
Alignment:
Q  758 tttgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacac 813  Q
    |||||||||||||| ||||||||||||||| ||||||||||| |||||||||||||    
T  45806 tttgttgagatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacac 45751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 34; Significance: 0.000000002; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 869 - 946
Target Start/End: Original strand, 1847 - 1923
Alignment:
Q  869 aaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtc 946  Q
    |||||||| ||||||  ||||||||||||||||||||   ||||||||| |||||||| ||  |||||||||||||||    
T  1847 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtt-tctctgataaggactggtc 1923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197 (Bit Score: 34; Significance: 0.000000002; HSPs: 2)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 869 - 946
Target Start/End: Original strand, 13892 - 13968
Alignment:
Q  869 aaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtc 946  Q
    |||||||| ||||||  ||||||||||||||||||||   ||||||||| |||||| ||||  |||||||||||||||    
T  13892 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaag-tatctctgataaggactggtc 13968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197; HSP #2
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 869 - 946
Target Start/End: Original strand, 18772 - 18848
Alignment:
Q  869 aaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtc 946  Q
    |||||||| ||||||  ||||||||||||||||||||   ||||||||| |||||| ||||  |||||| ||||||||    
T  18772 aaatcgtgccacgatcttgggaaatcgtgacacgattcagaaacttgctggttaag-tatctctgataaagactggtc 18848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 34; Significance: 0.000000002; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 869 - 946
Target Start/End: Original strand, 148552 - 148628
Alignment:
Q  869 aaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtc 946  Q
    |||||||| ||||||  ||||||||||||||||||||   ||||||||| |||||||| ||  |||||||||||||||    
T  148552 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtt-tctctgataaggactggtc 148628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 34; Significance: 0.000000002; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 869 - 946
Target Start/End: Original strand, 176558 - 176634
Alignment:
Q  869 aaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagttatccttgataaggactggtc 946  Q
    |||||||| ||||||  ||||||||||||||||||||   ||||||||| |||||| ||||  |||||||||||||||    
T  176558 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaag-tatctctgataaggactggtc 176634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 33; Significance: 0.000000006; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 870 - 906
Target Start/End: Original strand, 434218 - 434254
Alignment:
Q  870 aatcgtgacacgattgtgggaaatcgtgacacgattt 906  Q
    ||||||||||||||| |||||||||||||||||||||    
T  434218 aatcgtgacacgattttgggaaatcgtgacacgattt 434254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 857 - 906
Target Start/End: Complemental strand, 17758 - 17709
Alignment:
Q  857 ttgcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgattt 906  Q
    |||||||||| | || |||||||||||| ||||||| |||||||||||||    
T  17758 ttgcagggtgtccaaccgtgacacgattttgggaaaacgtgacacgattt 17709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 857 - 906
Target Start/End: Complemental strand, 20909 - 20860
Alignment:
Q  857 ttgcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgattt 906  Q
    |||||||||| | |||| |||||||||| ||||||| |||||||||||||    
T  20909 ttgcagggtgtccaatcatgacacgattttgggaaaacgtgacacgattt 20860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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