View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3436R-Insertion-7 (Length: 537)

Name: NF3436R-Insertion-7
Description: NF3436R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3436R-Insertion-7
NF3436R-Insertion-7
[»] chr8 (69 HSPs)
chr8 (227-467)||(7858454-7858694)
chr8 (293-467)||(34890168-34890342)
chr8 (227-467)||(7022397-7022637)
chr8 (295-467)||(26483526-26483698)
chr8 (293-467)||(43216341-43216515)
chr8 (293-467)||(36190764-36190938)
chr8 (227-463)||(41086384-41086621)
chr8 (293-467)||(34158284-34158459)
chr8 (293-441)||(13143756-13143904)
chr8 (293-441)||(31734107-31734255)
chr8 (294-465)||(8107613-8107784)
chr8 (293-466)||(24892830-24893006)
chr8 (293-453)||(16879400-16879560)
chr8 (295-467)||(29920262-29920434)
chr8 (293-448)||(35456038-35456192)
chr8 (367-467)||(13143939-13144040)
chr8 (293-460)||(28348603-28348769)
chr8 (293-453)||(15957919-15958081)
chr8 (353-467)||(16358106-16358219)
chr8 (309-467)||(30575828-30575987)
chr8 (293-467)||(8711868-8712038)
chr8 (316-453)||(35525602-35525737)
chr8 (295-467)||(8709780-8709950)
chr8 (293-464)||(15824634-15824799)
chr8 (293-467)||(7499718-7499881)
chr8 (366-466)||(41362302-41362402)
chr8 (393-467)||(2052955-2053029)
chr8 (366-465)||(8745648-8745747)
chr8 (364-467)||(33563501-33563608)
chr8 (366-467)||(17336807-17336908)
chr8 (366-467)||(34713594-34713695)
chr8 (366-467)||(38072228-38072329)
chr8 (295-467)||(4046887-4047060)
chr8 (366-467)||(8712589-8712690)
chr8 (366-467)||(17713288-17713389)
chr8 (415-461)||(11158675-11158721)
chr8 (366-412)||(26954441-26954487)
chr8 (355-467)||(44663786-44663895)
chr8 (366-467)||(2628158-2628259)
chr8 (366-467)||(3100019-3100120)
chr8 (366-423)||(8673446-8673503)
chr8 (396-461)||(12108251-12108316)
chr8 (366-423)||(25195085-25195141)
chr8 (366-467)||(35344433-35344534)
chr8 (366-467)||(44411203-44411304)
chr8 (415-467)||(7756685-7756737)
chr8 (411-467)||(40773397-40773453)
chr8 (300-392)||(3642039-3642130)
chr8 (367-422)||(4038920-4038975)
chr8 (498-537)||(17692300-17692339)
chr8 (367-466)||(28497133-28497232)
chr8 (359-405)||(2052892-2052938)
chr8 (357-466)||(34899981-34900090)
chr8 (366-467)||(27621196-27621297)
chr8 (366-467)||(27752652-27752753)
chr8 (293-341)||(13144081-13144129)
chr8 (366-461)||(6401685-6401780)
chr8 (365-416)||(14693433-14693484)
chr8 (379-461)||(37598148-37598230)
chr8 (293-409)||(41755918-41756033)
chr8 (417-467)||(45190700-45190750)
chr8 (295-336)||(2052830-2052871)
chr8 (366-467)||(5217457-5217557)
chr8 (366-467)||(11044123-11044224)
chr8 (366-467)||(24612474-24612575)
chr8 (366-467)||(31133023-31133124)
chr8 (366-467)||(35260123-35260224)
chr8 (366-467)||(35346298-35346399)
chr8 (366-467)||(44052687-44052788)
[»] chr7 (64 HSPs)
chr7 (227-467)||(18102457-18102698)
chr7 (230-467)||(46760249-46760487)
chr7 (293-467)||(6191039-6191213)
chr7 (227-467)||(14805798-14806037)
chr7 (227-467)||(15252792-15253031)
chr7 (293-461)||(25944570-25944738)
chr7 (295-467)||(45485951-45486123)
chr7 (194-467)||(19912761-19913034)
chr7 (227-467)||(35923180-35923419)
chr7 (295-467)||(25737619-25737791)
chr7 (293-467)||(4910627-4910799)
chr7 (293-448)||(20123691-20123846)
chr7 (359-467)||(12632336-12632444)
chr7 (295-467)||(22632085-22632257)
chr7 (293-467)||(44682872-44683045)
chr7 (295-467)||(47779600-47779772)
chr7 (293-436)||(47557622-47557767)
chr7 (353-467)||(16917525-16917639)
chr7 (295-461)||(14574560-14574726)
chr7 (367-467)||(35887961-35888061)
chr7 (293-453)||(11780012-11780171)
chr7 (354-423)||(35068885-35068954)
chr7 (368-467)||(37767011-37767110)
chr7 (366-461)||(40560444-40560539)
chr7 (366-467)||(10248595-10248698)
chr7 (295-461)||(15995715-15995882)
chr7 (365-423)||(31768998-31769056)
chr7 (373-467)||(33153108-33153202)
chr7 (375-467)||(2633329-2633421)
chr7 (227-336)||(12633110-12633219)
chr7 (366-461)||(3157498-3157593)
chr7 (293-414)||(9158084-9158204)
chr7 (353-453)||(48413772-48413867)
chr7 (366-461)||(48879450-48879545)
chr7 (367-465)||(39170602-39170700)
chr7 (366-467)||(43107856-43107957)
chr7 (366-461)||(41815650-41815745)
chr7 (193-282)||(47557924-47558013)
chr7 (353-423)||(31549939-31550009)
chr7 (366-467)||(19933006-19933107)
chr7 (366-467)||(23106515-23106616)
chr7 (366-467)||(32491058-32491159)
chr7 (366-467)||(35181254-35181355)
chr7 (366-467)||(41889233-41889334)
chr7 (366-467)||(44600508-44600609)
chr7 (293-441)||(2610586-2610734)
chr7 (411-462)||(19492390-19492441)
chr7 (366-461)||(19964151-19964246)
chr7 (354-401)||(24151640-24151687)
chr7 (373-467)||(35084052-35084146)
chr7 (373-467)||(42617740-42617834)
chr7 (366-460)||(47383468-47383562)
chr7 (366-467)||(7989259-7989360)
chr7 (366-467)||(9818530-9818631)
chr7 (366-467)||(10720455-10720556)
chr7 (366-467)||(18206270-18206371)
chr7 (366-467)||(22111281-22111382)
chr7 (366-467)||(29713256-29713357)
chr7 (366-467)||(38260383-38260484)
chr7 (366-467)||(40583207-40583308)
chr7 (353-405)||(4069057-4069109)
chr7 (392-467)||(4069253-4069331)
chr7 (293-333)||(35068961-35069001)
chr7 (366-461)||(45598966-45599062)
[»] chr1 (89 HSPs)
chr1 (293-467)||(15959633-15959807)
chr1 (227-467)||(32623998-32624239)
chr1 (227-467)||(39555579-39555819)
chr1 (227-467)||(43667296-43667533)
chr1 (227-459)||(12448969-12449200)
chr1 (227-467)||(2125965-2126206)
chr1 (293-461)||(7467961-7468130)
chr1 (293-467)||(45226132-45226306)
chr1 (295-467)||(35691388-35691560)
chr1 (293-467)||(33369547-33369718)
chr1 (293-467)||(6786832-6787006)
chr1 (293-466)||(6785450-6785622)
chr1 (295-467)||(24190466-24190637)
chr1 (293-461)||(42965815-42965981)
chr1 (293-467)||(28016739-28016911)
chr1 (293-467)||(28120748-28120922)
chr1 (293-467)||(32983165-32983337)
chr1 (293-467)||(40718672-40718846)
chr1 (293-466)||(47014487-47014657)
chr1 (353-467)||(11241081-11241195)
chr1 (293-463)||(46542978-46543146)
chr1 (293-466)||(47600030-47600206)
chr1 (293-467)||(13136547-13136717)
chr1 (293-467)||(33431555-33431727)
chr1 (293-456)||(39932576-39932739)
chr1 (294-461)||(46818501-46818668)
chr1 (293-467)||(3875012-3875188)
chr1 (293-461)||(1820409-1820577)
chr1 (307-467)||(24728619-24728780)
chr1 (355-467)||(52984989-52985101)
chr1 (353-456)||(3861699-3861802)
chr1 (295-467)||(3076291-3076463)
chr1 (293-448)||(2246026-2246181)
chr1 (293-448)||(37735395-37735550)
chr1 (353-467)||(44148829-44148943)
chr1 (392-466)||(4672924-4672998)
chr1 (353-459)||(30221779-30221885)
chr1 (353-467)||(32742195-32742309)
chr1 (359-467)||(1034917-1035023)
chr1 (366-467)||(50176589-50176690)
chr1 (296-420)||(10558796-10558920)
chr1 (293-442)||(25391678-25391824)
chr1 (311-467)||(7875933-7876091)
chr1 (366-467)||(30701378-30701479)
chr1 (298-409)||(16854139-16854250)
chr1 (366-467)||(7397773-7397874)
chr1 (366-467)||(35884274-35884375)
chr1 (366-467)||(45840059-45840159)
chr1 (353-465)||(47302903-47303012)
chr1 (318-467)||(50369981-50370118)
chr1 (365-467)||(35941903-35942005)
chr1 (366-467)||(43656033-43656134)
chr1 (366-467)||(52841438-52841539)
chr1 (366-461)||(25185302-25185398)
chr1 (353-467)||(32318553-32318667)
chr1 (366-467)||(5950506-5950610)
chr1 (366-428)||(8889729-8889791)
chr1 (353-463)||(298665-298776)
chr1 (354-419)||(5858412-5858477)
chr1 (366-467)||(15285866-15285967)
chr1 (355-408)||(15912254-15912307)
chr1 (366-423)||(16688203-16688260)
chr1 (293-415)||(23392211-23392332)
chr1 (366-467)||(23873823-23873924)
chr1 (366-467)||(25990811-25990912)
chr1 (366-467)||(37538876-37538977)
chr1 (366-467)||(38942437-38942538)
chr1 (366-423)||(43765361-43765418)
chr1 (354-423)||(44510256-44510325)
chr1 (366-467)||(46949384-46949485)
chr1 (366-467)||(51338891-51338991)
chr1 (366-405)||(13351747-13351786)
chr1 (389-460)||(13352184-13352255)
chr1 (366-461)||(35366202-35366297)
chr1 (373-467)||(26907087-26907181)
chr1 (294-400)||(6787050-6787155)
chr1 (366-423)||(16661583-16661639)
chr1 (366-467)||(28916511-28916612)
chr1 (366-467)||(40935609-40935710)
chr1 (366-467)||(49924482-49924583)
chr1 (293-333)||(11241037-11241077)
chr1 (366-436)||(18852286-18852356)
chr1 (366-467)||(35189264-35189366)
chr1 (353-467)||(36383978-36384092)
chr1 (373-467)||(39026242-39026336)
chr1 (371-461)||(46803670-46803760)
chr1 (293-335)||(50012585-50012627)
chr1 (366-467)||(40960470-40960571)
chr1 (413-461)||(18036654-18036702)
[»] chr5 (60 HSPs)
chr5 (227-467)||(11261877-11262117)
chr5 (293-467)||(20644008-20644182)
chr5 (295-467)||(6686380-6686553)
chr5 (293-466)||(34425325-34425497)
chr5 (227-467)||(43589955-43590195)
chr5 (227-467)||(37562754-37562995)
chr5 (293-467)||(42273643-42273815)
chr5 (297-467)||(20039100-20039270)
chr5 (227-457)||(37522592-37522823)
chr5 (293-441)||(32110996-32111144)
chr5 (293-461)||(43454322-43454490)
chr5 (293-460)||(38130113-38130283)
chr5 (295-467)||(25840860-25841032)
chr5 (296-463)||(19413138-19413305)
chr5 (293-421)||(38280841-38280969)
chr5 (295-467)||(17351384-17351556)
chr5 (353-467)||(23233465-23233579)
chr5 (353-455)||(41625517-41625618)
chr5 (366-461)||(12912294-12912388)
chr5 (293-445)||(8225457-8225608)
chr5 (307-448)||(42104262-42104401)
chr5 (354-442)||(5984126-5984214)
chr5 (293-404)||(32017698-32017808)
chr5 (307-467)||(4463368-4463526)
chr5 (295-467)||(39505225-39505397)
chr5 (365-423)||(8959706-8959764)
chr5 (366-453)||(16153353-16153439)
chr5 (388-458)||(32019910-32019980)
chr5 (367-467)||(5736233-5736333)
chr5 (407-467)||(12792779-12792839)
chr5 (366-461)||(8506498-8506593)
chr5 (293-467)||(9957428-9957583)
chr5 (354-461)||(30703656-30703763)
chr5 (355-461)||(32079560-32079666)
chr5 (366-463)||(3463814-3463909)
chr5 (366-423)||(5369068-5369125)
chr5 (366-458)||(1144493-1144585)
chr5 (407-467)||(12729878-12729937)
chr5 (293-341)||(12730099-12730147)
chr5 (367-414)||(104260-104307)
chr5 (295-403)||(7071234-7071342)
chr5 (366-461)||(13146794-13146889)
chr5 (366-461)||(29307186-29307281)
chr5 (366-467)||(24432393-24432494)
chr5 (366-467)||(25962441-25962542)
chr5 (366-423)||(28907136-28907192)
chr5 (366-423)||(28943531-28943587)
chr5 (366-467)||(31316794-31316895)
chr5 (366-467)||(31690613-31690714)
chr5 (293-345)||(5984230-5984282)
chr5 (367-467)||(8146006-8146106)
chr5 (411-467)||(30893243-30893299)
chr5 (366-401)||(10153987-10154022)
chr5 (293-332)||(12792929-12792968)
chr5 (353-467)||(24439624-24439738)
chr5 (366-467)||(12638954-12639055)
chr5 (366-467)||(16286076-16286177)
chr5 (296-336)||(104346-104386)
chr5 (353-461)||(8143986-8144094)
chr5 (411-467)||(36413929-36413985)
[»] scaffold0045 (1 HSPs)
scaffold0045 (227-467)||(77885-78125)
[»] chr4 (75 HSPs)
chr4 (228-467)||(47867806-47868045)
chr4 (294-467)||(4058708-4058881)
chr4 (228-467)||(41414597-41414834)
chr4 (227-467)||(2229173-2229413)
chr4 (293-467)||(20281583-20281757)
chr4 (293-467)||(29203498-29203672)
chr4 (227-467)||(26916251-26916491)
chr4 (293-467)||(17794527-17794701)
chr4 (227-467)||(14332685-14332926)
chr4 (227-467)||(28668987-28669226)
chr4 (293-467)||(20716172-20716346)
chr4 (316-467)||(7654632-7654783)
chr4 (293-467)||(5483264-5483438)
chr4 (293-467)||(39078149-39078322)
chr4 (316-461)||(16604838-16604983)
chr4 (293-467)||(10069689-10069863)
chr4 (301-467)||(24940365-24940531)
chr4 (293-461)||(56318062-56318230)
chr4 (293-467)||(55580661-55580836)
chr4 (293-467)||(1585335-1585507)
chr4 (293-463)||(35310732-35310902)
chr4 (357-467)||(21722668-21722778)
chr4 (381-461)||(16473828-16473908)
chr4 (367-501)||(5064607-5064741)
chr4 (295-466)||(42915523-42915695)
chr4 (366-459)||(32203278-32203371)
chr4 (295-467)||(48793616-48793784)
chr4 (307-463)||(32323252-32323407)
chr4 (307-430)||(5815475-5815598)
chr4 (366-467)||(28142608-28142709)
chr4 (295-467)||(8683292-8683462)
chr4 (295-467)||(14583723-14583895)
chr4 (407-467)||(50080442-50080502)
chr4 (366-467)||(32410393-32410494)
chr4 (366-459)||(46070517-46070609)
chr4 (366-427)||(49080322-49080383)
chr4 (411-467)||(12002619-12002675)
chr4 (366-454)||(47516190-47516278)
chr4 (353-447)||(32280009-32280103)
chr4 (365-423)||(29511489-29511547)
chr4 (366-467)||(8013075-8013176)
chr4 (366-463)||(17799124-17799221)
chr4 (366-467)||(29899775-29899876)
chr4 (293-461)||(52535589-52535745)
chr4 (307-467)||(19351852-19352018)
chr4 (307-430)||(50145742-50145864)
chr4 (391-460)||(17236262-17236331)
chr4 (366-467)||(29180371-29180472)
chr4 (293-387)||(35529664-35529758)
chr4 (366-467)||(28318408-28318504)
chr4 (295-387)||(25297288-25297380)
chr4 (373-467)||(5222252-5222346)
chr4 (413-463)||(7438760-7438810)
chr4 (365-467)||(9798034-9798136)
chr4 (365-467)||(38940928-38941030)
chr4 (366-467)||(30011913-30012014)
chr4 (366-467)||(30776443-30776544)
chr4 (366-467)||(30777547-30777648)
chr4 (366-467)||(32012286-32012387)
chr4 (366-467)||(37788511-37788612)
chr4 (366-423)||(37911949-37912006)
chr4 (366-467)||(39969948-39970049)
chr4 (366-467)||(50768505-50768606)
chr4 (366-467)||(53677438-53677539)
chr4 (366-467)||(53848525-53848626)
chr4 (366-466)||(5841766-5841866)
chr4 (411-463)||(52713160-52713212)
chr4 (359-441)||(31280253-31280329)
chr4 (372-418)||(8178274-8178320)
chr4 (366-467)||(3043126-3043227)
chr4 (366-467)||(10591462-10591563)
chr4 (366-399)||(23978169-23978202)
chr4 (419-467)||(4443086-4443133)
chr4 (410-462)||(31532444-31532496)
chr4 (407-467)||(51495250-51495310)
[»] chr3 (82 HSPs)
chr3 (293-467)||(47864189-47864363)
chr3 (295-467)||(50650989-50651161)
chr3 (294-467)||(14752160-14752333)
chr3 (295-467)||(37042369-37042541)
chr3 (293-467)||(7866435-7866609)
chr3 (293-467)||(54464848-54465021)
chr3 (227-461)||(23311551-23311785)
chr3 (194-461)||(11054269-11054533)
chr3 (293-467)||(46711610-46711783)
chr3 (227-467)||(36546474-36546714)
chr3 (227-467)||(36561601-36561841)
chr3 (293-461)||(37074956-37075126)
chr3 (293-467)||(6075079-6075253)
chr3 (293-467)||(28875404-28875578)
chr3 (293-467)||(35963150-35963324)
chr3 (295-467)||(30189570-30189743)
chr3 (293-467)||(579097-579264)
chr3 (293-441)||(6438081-6438229)
chr3 (293-467)||(50730107-50730281)
chr3 (293-467)||(50782573-50782747)
chr3 (360-500)||(9264616-9264756)
chr3 (293-466)||(19464073-19464248)
chr3 (294-461)||(26724949-26725116)
chr3 (227-467)||(23910465-23910687)
chr3 (359-467)||(31836983-31837091)
chr3 (293-459)||(53270231-53270398)
chr3 (295-467)||(2927289-2927462)
chr3 (366-467)||(41476287-41476389)
chr3 (293-467)||(8703107-8703277)
chr3 (293-467)||(9054994-9055164)
chr3 (296-453)||(20847235-20847391)
chr3 (293-461)||(32619787-32619956)
chr3 (353-467)||(29235245-29235359)
chr3 (295-467)||(26208014-26208186)
chr3 (366-467)||(10114976-10115077)
chr3 (366-467)||(10014334-10014435)
chr3 (366-467)||(10252076-10252177)
chr3 (366-461)||(22479012-22479107)
chr3 (353-467)||(47115907-47116021)
chr3 (356-467)||(33973518-33973630)
chr3 (307-467)||(8096970-8097130)
chr3 (366-467)||(31126276-31126377)
chr3 (369-466)||(47443927-47444023)
chr3 (366-458)||(3084141-3084233)
chr3 (300-401)||(34722623-34722724)
chr3 (295-423)||(3972275-3972402)
chr3 (295-423)||(3997476-3997603)
chr3 (366-460)||(22455967-22456061)
chr3 (295-386)||(47866946-47867036)
chr3 (370-467)||(25242130-25242227)
chr3 (366-467)||(34022663-34022764)
chr3 (375-463)||(17587779-17587867)
chr3 (367-467)||(21654310-21654410)
chr3 (366-467)||(38401445-38401550)
chr3 (307-384)||(38674882-38674959)
chr3 (353-467)||(8769531-8769643)
chr3 (366-419)||(16032987-16033040)
chr3 (366-423)||(21214306-21214363)
chr3 (366-467)||(31292676-31292777)
chr3 (366-467)||(34194953-34195054)
chr3 (366-467)||(55400802-55400903)
chr3 (293-345)||(48802554-48802606)
chr3 (353-467)||(8764631-8764743)
chr3 (371-457)||(30454687-30454773)
chr3 (353-467)||(30612229-30612343)
chr3 (366-467)||(37324038-37324140)
chr3 (370-467)||(46557122-46557219)
chr3 (373-467)||(51309484-51309578)
chr3 (367-423)||(6784390-6784446)
chr3 (293-345)||(33974633-33974685)
chr3 (367-463)||(51255251-51255347)
chr3 (295-383)||(46557237-46557325)
chr3 (366-401)||(54725628-54725663)
chr3 (293-335)||(41476413-41476455)
chr3 (413-463)||(46303689-46303739)
chr3 (397-467)||(46580630-46580700)
chr3 (366-467)||(28793226-28793327)
chr3 (366-467)||(36188961-36189062)
chr3 (366-463)||(45347672-45347769)
chr3 (366-419)||(46918213-46918266)
chr3 (366-467)||(49068115-49068216)
chr3 (293-345)||(9264006-9264058)
[»] chr2 (57 HSPs)
chr2 (227-467)||(6110191-6110433)
chr2 (293-467)||(19264093-19264268)
chr2 (227-467)||(41528184-41528425)
chr2 (230-467)||(45085188-45085425)
chr2 (293-467)||(45660359-45660536)
chr2 (293-467)||(3201320-3201494)
chr2 (227-461)||(28599146-28599381)
chr2 (295-467)||(35517119-35517291)
chr2 (293-466)||(33198624-33198797)
chr2 (293-460)||(28858303-28858473)
chr2 (293-467)||(12938236-12938410)
chr2 (295-467)||(11617020-11617192)
chr2 (293-467)||(24204521-24204695)
chr2 (366-467)||(43415468-43415569)
chr2 (293-467)||(6765925-6766100)
chr2 (295-467)||(29524033-29524205)
chr2 (293-441)||(14873956-14874105)
chr2 (295-467)||(25572042-25572213)
chr2 (295-467)||(9864710-9864881)
chr2 (308-461)||(5963210-5963362)
chr2 (367-467)||(35022967-35023066)
chr2 (293-461)||(33677477-33677645)
chr2 (298-461)||(8701601-8701764)
chr2 (293-467)||(7645219-7645396)
chr2 (367-467)||(40808712-40808811)
chr2 (366-467)||(26998384-26998485)
chr2 (295-465)||(30830590-30830760)
chr2 (366-467)||(32010169-32010270)
chr2 (367-467)||(35115795-35115896)
chr2 (293-437)||(40584422-40584564)
chr2 (366-461)||(38071062-38071157)
chr2 (366-467)||(4891630-4891732)
chr2 (366-461)||(32273738-32273837)
chr2 (295-463)||(44454987-44455153)
chr2 (355-463)||(32428029-32428138)
chr2 (373-464)||(9294725-9294816)
chr2 (365-411)||(16494974-16495020)
chr2 (372-467)||(33932915-33933010)
chr2 (366-466)||(4707488-4707585)
chr2 (376-467)||(11825351-11825438)
chr2 (366-467)||(792348-792449)
chr2 (354-419)||(9709568-9709633)
chr2 (366-467)||(14565365-14565466)
chr2 (366-467)||(18833902-18834003)
chr2 (366-467)||(21539820-21539921)
chr2 (395-453)||(5280536-5280595)
chr2 (404-467)||(15858681-15858744)
chr2 (373-467)||(4092081-4092175)
chr2 (366-467)||(10478241-10478342)
chr2 (378-423)||(20380202-20380247)
chr2 (366-467)||(28492583-28492684)
chr2 (366-467)||(38071442-38071543)
chr2 (366-467)||(38549635-38549736)
chr2 (365-453)||(44442197-44442286)
chr2 (366-467)||(44803961-44804062)
chr2 (373-461)||(8784465-8784553)
chr2 (367-467)||(35832476-35832576)
[»] chr6 (30 HSPs)
chr6 (227-467)||(21542346-21542586)
chr6 (295-461)||(11082244-11082410)
chr6 (227-467)||(35129047-35129288)
chr6 (227-463)||(3095717-3095954)
chr6 (295-467)||(34177634-34177806)
chr6 (295-467)||(7274868-7275040)
chr6 (294-463)||(30794189-30794358)
chr6 (293-467)||(12461422-12461596)
chr6 (353-467)||(14573121-14573234)
chr6 (400-467)||(9428846-9428913)
chr6 (293-429)||(31107185-31107320)
chr6 (365-467)||(15830759-15830861)
chr6 (366-467)||(4032052-4032156)
chr6 (366-423)||(16524444-16524501)
chr6 (293-467)||(17751737-17751911)
chr6 (371-467)||(5822027-5822123)
chr6 (366-423)||(4988008-4988065)
chr6 (366-423)||(16013469-16013526)
chr6 (366-460)||(17598356-17598450)
chr6 (357-467)||(21964011-21964121)
chr6 (366-467)||(5881746-5881846)
chr6 (366-467)||(10227975-10228076)
chr6 (368-420)||(3888494-3888546)
chr6 (366-401)||(5300659-5300694)
chr6 (366-436)||(30949198-30949268)
chr6 (366-467)||(374162-374263)
chr6 (378-467)||(5121449-5121538)
chr6 (367-467)||(17721802-17721902)
chr6 (367-467)||(30766510-30766610)
chr6 (367-467)||(32882684-32882784)
[»] scaffold0442 (1 HSPs)
scaffold0442 (293-461)||(10039-10207)
[»] scaffold0300 (1 HSPs)
scaffold0300 (295-467)||(566-738)
[»] scaffold0062 (1 HSPs)
scaffold0062 (293-467)||(44764-44938)
[»] scaffold0018 (1 HSPs)
scaffold0018 (230-463)||(154792-155024)
[»] scaffold0132 (2 HSPs)
scaffold0132 (293-467)||(1006-1180)
scaffold0132 (293-467)||(8966-9140)
[»] scaffold0774 (1 HSPs)
scaffold0774 (293-441)||(3447-3595)
[»] scaffold0009 (2 HSPs)
scaffold0009 (295-461)||(157790-157956)
scaffold0009 (307-386)||(52676-52755)
[»] scaffold0565 (1 HSPs)
scaffold0565 (365-467)||(5868-5970)
[»] scaffold0005 (1 HSPs)
scaffold0005 (295-467)||(233480-233652)
[»] scaffold0111 (1 HSPs)
scaffold0111 (294-442)||(40174-40321)
[»] scaffold0330 (1 HSPs)
scaffold0330 (366-467)||(3235-3336)
[»] scaffold1786 (1 HSPs)
scaffold1786 (353-458)||(901-997)
[»] scaffold0495 (1 HSPs)
scaffold0495 (366-467)||(4693-4794)
[»] scaffold0010 (1 HSPs)
scaffold0010 (366-467)||(160912-161013)


Alignment Details
Target: chr8 (Bit Score: 131; Significance: 1e-67; HSPs: 69)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 227 - 467
Target Start/End: Original strand, 7858454 - 7858694
Alignment:
Q  227 cacattttctttgtcccaaaatataagnnnnnnngacaaacttttatctttttcaatannnnnnnngtttattctcatagaattaaatgaaaattacatt 326  Q
    |||||||||||||||||||||||||||       |||||||||||||||||| ||| |        ||||||||||||| ||||||||| ||||||| ||    
T  7858454 cacattttctttgtcccaaaatataagcaaaaaagacaaacttttatcttttccaagattttttttgtttattctcataaaattaaatgcaaattacttt 7858553  T
Q  327 caattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaatta 426  Q
    |||||||||| ||||||||       |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| ||    
T  7858554 caattttctctctctttcattttttccataatcaatggtcaatgaaaattgtttttacatcttcctataaaacttttttcaaataaaacacaaaaaacta 7858653  T
Q  427 tacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  7858654 tactccaaattcttatgttttagttttcttaataaatgtga 7858694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 293 - 467
Target Start/End: Complemental strand, 34890342 - 34890168
Alignment:
Q  293 gtttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcct 392  Q
    ||||||||||||| ||||||||| |||||||||||||||||||| ||||||||       ||||| |||||| |||||||||||||||||||||| ||||    
T  34890342 gtttattctcataaaattaaatgcaaattacattcaattttctctctctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcct 34890243  T
Q  393 ataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||    
T  34890242 ataaaactttttccaaagaaaacacaaaaaattatactccaaattcttatgttttagttttcttaataagtgtga 34890168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 227 - 467
Target Start/End: Complemental strand, 7022637 - 7022397
Alignment:
Q  227 cacattttctttgtcccaaaatataagnnnnnnngacaaacttttatctttttcaatannnnnnnngtttattctcatagaattaaatgaaaattacatt 326  Q
    |||||||||||||||||||||||||||       |||||||||||||||||||||| |          ||||||||||| ||||||||| ||||||||||    
T  7022637 cacattttctttgtcccaaaatataagcaaaaaagacaaacttttatctttttcaagatttttttttgttattctcataaaattaaatgcaaattacatt 7022538  T
Q  327 caattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaatta 426  Q
    ||||||||||  |||||||       ||||| |||||| ||||||||||| |||||| ||| ||||||||||||||||||||||||||||||||||| ||    
T  7022537 caattttctctttctttcattttttccataaccaatagccaatgaaaattatttttatatcttcctataaaacttttttcaaagaaaacacaaaaaacta 7022438  T
Q  427 tacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    |||| |||||| |||||||||||||||||||||||||||||    
T  7022437 tactccaaatttttatgttttagttttcttaataaatgtga 7022397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 295 - 467
Target Start/End: Original strand, 26483526 - 26483698
Alignment:
Q  295 ttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcctat 394  Q
    |||||||| || ||||||||| ||||||||||||||||||||  |||||||       |||||||||||| ||||||||||||||||||||||  |||||    
T  26483526 ttattctcgtaaaattaaatgtaaattacattcaattttctctttctttcattttttccataatcaatagccaatgaaaattgtttttacatctccctat 26483625  T
Q  395 aaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||    
T  26483626 aaaacttttttcaaagaaaacacaaaaaactatacttcaaattcttatgttttagttttcttaataagtgtga 26483698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 293 - 467
Target Start/End: Complemental strand, 43216515 - 43216341
Alignment:
Q  293 gtttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcct 392  Q
    ||||||||||||| ||||||||| |||||||||| |||||| || ||||||||       ||||| ||||||| ||||||||||||||||||||| ||||    
T  43216515 gtttattctcataaaattaaatgcaaattacatttaattttatctctctttcattttctccataaccaatagtgaatgaaaattgtttttacatcttcct 43216416  T
Q  393 ataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    ||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| |||||    
T  43216415 ataaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgtga 43216341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 293 - 467
Target Start/End: Original strand, 36190764 - 36190938
Alignment:
Q  293 gtttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcct 392  Q
    ||||||||||||| ||||||||| |||||||||||||||||||| |||||| |       ||||| |||||| |||||||||||||||||||||| ||||    
T  36190764 gtttattctcataaaattaaatgcaaattacattcaattttctctctcttttattttttccataaccaatagccaatgaaaattgtttttacatcttcct 36190863  T
Q  393 ataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    ||||||||||||||||||||||||||||||| ||||||  |||||||||||||||||||||||||| || |||||    
T  36190864 ataaaacttttttcaaagaaaacacaaaaaactatactctaaattcttatgttttagttttcttaacaagtgtga 36190938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 227 - 463
Target Start/End: Complemental strand, 41086621 - 41086384
Alignment:
Q  227 cacattttctttgtcccaaaatataagnnnnnnn-gacaaacttttatctttttcaatannnnnnnngtttattctcatagaattaaatgaaaattacat 325  Q
    |||||||||||||||||||||||||||        |||||||||||||||||||||| |        ||||||||||||| ||||||||| |||||||||    
T  41086621 cacattttctttgtcccaaaatataagcaaaaaaagacaaacttttatctttttcaagattttttttgtttattctcataaaattaaatgcaaattacat 41086522  T
Q  326 tcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaatt 425  Q
    | ||||||||| || ||| |       ||| | |||||| |||||||||||||||||||||| |  |||||||||||||||||||||||||||||||| |    
T  41086521 tgaattttctctctgttttattttttccattaccaatagccaatgaaaattgtttttacatctttatataaaacttttttcaaagaaaacacaaaaaact 41086422  T
Q  426 atacttcaaattcttatgttttagttttcttaataaat 463  Q
    ||| |||||||| ||||  |||||||||||||||||||    
T  41086421 ataattcaaatttttattatttagttttcttaataaat 41086384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 293 - 467
Target Start/End: Complemental strand, 34158459 - 34158284
Alignment:
Q  293 gtttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcct 392  Q
    ||||||| ||||| ||||||||| |||||||||||||||||||| ||||||         ||||| ||||||||||||||||||||||||||||| ||||    
T  34158459 gtttattatcataaaattaaatgcaaattacattcaattttctctctcttttgtttttttcataaccaatagtcaatgaaaattgtttttacatcttcct 34158360  T
Q  393 ataaaactt-ttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    ||||||||| |||| ||||||||||||| ||| |||||| || |||||||||||||| ||||||||||||||||||    
T  34158359 ataaaacttttttttaaagaaaacacaacaaactatactccagattcttatgttttaattttcttaataaatgtga 34158284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 293 - 441
Target Start/End: Original strand, 13143756 - 13143904
Alignment:
Q  293 gtttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcct 392  Q
    ||||||||||||| ||||||||| ||||||||||||||||| || ||||||||       || || ||| || |||||||||||||||||||||| ||||    
T  13143756 gtttattctcataaaattaaatgcaaattacattcaattttttctctctttcatttttcccacaaccaacagccaatgaaaattgtttttacatcttcct 13143855  T
Q  393 ataaaacttttttcaaagaaaacacaaaaaattatacttcaaattctta 441  Q
    || ||||||||||||| ||||||||||||||||||||||||||||||||    
T  13143856 atgaaacttttttcaacgaaaacacaaaaaattatacttcaaattctta 13143904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 293 - 441
Target Start/End: Original strand, 31734107 - 31734255
Alignment:
Q  293 gtttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcct 392  Q
    ||||||||||||  ||||||||| |||||||||||||||||||| ||||||||       ||||  |||||| |||||||||||||||||| ||| ||||    
T  31734107 gtttattctcatcaaattaaatgcaaattacattcaattttctctctctttcattttttccatatccaatagccaatgaaaattgtttttatatcttcct 31734206  T
Q  393 ataaaacttttttcaaagaaaacacaaaaaattatacttcaaattctta 441  Q
    ||||||||||||||||||||||||||||||| |||||| ||||||||||    
T  31734207 ataaaacttttttcaaagaaaacacaaaaaactatactccaaattctta 31734255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 294 - 465
Target Start/End: Complemental strand, 8107784 - 8107613
Alignment:
Q  294 tttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatccta 393  Q
    |||||||||||| ||||||||| |||||||||||||||||||| ||||||||       ||||| |||||| ||||||||||||||||||||||||  |     
T  8107784 tttattctcataaaattaaatgcaaattacattcaattttctctctctttcatttatc-cataaccaatagccaatgaaaattgtttttacatcatattg 8107686  T
Q  394 taaaacttttttcaaagaaaacac-aaaaaattatacttcaaattcttatgttttagttttcttaataaatgt 465  Q
    ||||||||||||||||||||| || |||||| |||||| ||||||||||| ||||| |||| |||||||||||    
T  8107685 taaaacttttttcaaagaaaatacaaaaaaactatactccaaattcttatattttaatttttttaataaatgt 8107613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 293 - 466
Target Start/End: Original strand, 24892830 - 24893006
Alignment:
Q  293 gtttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttac---atcat 389  Q
    ||||||||||||| ||||||||| |||||||||||||||||||  ||||||||       ||||| |||||| ||||||||||||||||||    ||| |    
T  24892830 gtttattctcataaaattaaatgcaaattacattcaattttctatctctttcattttttccataaccaatagccaatgaaaattgtttttattatatcct 24892929  T
Q  390 cctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtg 466  Q
    |||||||||| |||| |||||||||||||||||| ||||||  |||||||||||||| |||||||||||||| ||||    
T  24892930 cctataaaacgttttccaaagaaaacacaaaaaactatactctaaattcttatgtttaagttttcttaataagtgtg 24893006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 293 - 453
Target Start/End: Complemental strand, 16879560 - 16879400
Alignment:
Q  293 gtttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcct 392  Q
    ||||||||| ||  ||||||||  ||| |||||||||||||||| ||||||||       ||||||||||||||||| ||||||||||||||||  |||     
T  16879560 gtttattcttatgaaattaaatacaaactacattcaattttctctctctttcattttcaccataatcaatagtcaataaaaattgtttttacatattccc 16879461  T
Q  393 ataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagtttt 453  Q
    || ||| || |||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  16879460 atgaaatttatttcaaagaaaacacaaaaaattatacttcaaattcttatattttagtttt 16879400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 295 - 467
Target Start/End: Complemental strand, 29920434 - 29920262
Alignment:
Q  295 ttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcctat 394  Q
    ||||||||||  ||||||||   ||||||||||||||||| | |||||  |       |||||||||||| |||||||||||||||||||||| ||| ||    
T  29920434 ttattctcatgaaattaaataccaattacattcaattttccctctcttctattttgtccataatcaatagccaatgaaaattgtttttacatcttcccat 29920335  T
Q  395 aaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
     |||||| || |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| |||||    
T  29920334 gaaacttattccaaagataacacaaaaaattgtacttcaaattcttatgttttagttttcttaataagtgtga 29920262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 293 - 448
Target Start/End: Complemental strand, 35456192 - 35456038
Alignment:
Q  293 gtttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcct 392  Q
    ||||||||||||| ||||||||| |||||||||||| ||||||| |||||| |       |||||| ||||| |||||||||||||||||||||| | ||    
T  35456192 gtttattctcataaaattaaatgtaaattacattcatttttctctctcttttattttttccataattaatagccaatgaaaattgtttttacatctttct 35456093  T
Q  393 ataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgtttta 448  Q
    |||||||||||| |||| |||||| |||||| ||||||||||||||||||||||||    
T  35456092 ataaaacttttt-caaaaaaaacataaaaaactatacttcaaattcttatgtttta 35456038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 367 - 467
Target Start/End: Complemental strand, 13144040 - 13143939
Alignment:
Q  367 aatgaaaattgtttttacatcatcctataaaactttttt-caaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgt 465  Q
    ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||| |||||| |||||||||||||||||||||||||||||| |||    
T  13144040 aatgaaaattgtttttacatcttcctataaaactttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgt 13143941  T
Q  466 ga 467  Q
    ||    
T  13143940 ga 13143939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 293 - 460
Target Start/End: Original strand, 28348603 - 28348769
Alignment:
Q  293 gtttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcct 392  Q
    ||||||||||||| ||||||||| |||||||||||||||||||| ||||||||       ||||| |||||| ||||| |||||||||||||||  ||||    
T  28348603 gtttattctcataaaattaaatgcaaattacattcaattttctctctctttcatttttc-cataaccaatagccaatggaaattgtttttacatattcct 28348701  T
Q  393 ataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaata 460  Q
    |||||||||||| ||||||||| |||||| | |||||| ||||||||||||||||  ||||| |||||    
T  28348702 ataaaactttttccaaagaaaatacaaaatactatactccaaattcttatgtttttattttcgtaata 28348769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 293 - 453
Target Start/End: Complemental strand, 15958081 - 15957919
Alignment:
Q  293 gtttattctcatagaattaaatgaaaattacattcaattttctccctct--ttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatc 390  Q
    ||||||||||||| ||||||||| |||||||||||||||||||| ||||  ||||       ||||| ||||||  |||||||||||||||||| |  ||    
T  15958081 gtttattctcataaaattaaatgcaaattacattcaattttctctctctctttcattttttccataaccaatagcaaatgaaaattgtttttacttattc 15957982  T
Q  391 ctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagtttt 453  Q
    ||||||||||||||||||||||||||||| ||| |||||| ||| ||||||| ||||||||||    
T  15957981 ctataaaacttttttcaaagaaaacacaataaactatactccaatttcttatattttagtttt 15957919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 353 - 467
Target Start/End: Complemental strand, 16358219 - 16358106
Alignment:
Q  353 cataatcaatagtcaatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttt 452  Q
    ||||||||||||||||||||||||| ||||||||| |||||| ||||||||| ||||||||||| |||||| ||||||||||||| |||| ||||| |||    
T  16358219 cataatcaatagtcaatgaaaattgattttacatcttcctatgaaacttttt-caaagaaaacaaaaaaaactatacttcaaatttttatattttaattt 16358121  T
Q  453 tcttaataaatgtga 467  Q
    ||||||||| |||||    
T  16358120 tcttaataagtgtga 16358106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 309 - 467
Target Start/End: Complemental strand, 30575987 - 30575828
Alignment:
Q  309 ttaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcctataaaa-cttttttca 407  Q
    ||||||| ||||||| || ||||||||| ||||||||       ||||| |||||| |||||||||||||||||||||  |||| ||||| ||||||| |    
T  30575987 ttaaatgcaaattacttttaattttctctctctttcattttttccataaccaatagccaatgaaaattgtttttacattttcctgtaaaaacttttttta 30575888  T
Q  408 aagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    |||||||||||||||| | |||| |||||| ||||||||||||||||||||||| |||||    
T  30575887 aagaaaacacaaaaaactttactccaaatttttatgttttagttttcttaataagtgtga 30575828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 293 - 467
Target Start/End: Original strand, 8711868 - 8712038
Alignment:
Q  293 gtttattctcatagaa-ttaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcc 391  Q
    ||||||||||||| || ||||||| |||||||||||||||||||| |||||| |       ||||| |||||| ||||||||||| |||||||||| |||    
T  8711868 gtttattctcataaaaattaaatgcaaattacattcaattttctctctctttaattttttccataaccaatagccaatgaaaattatttttacatcttcc 8711967  T
Q  392 tataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    ||||||||||||| |||| ||||||||||||| |||||| ||||    |||||||||||||| ||||||| |||||    
T  8711968 tataaaactttttccaaa-aaaacacaaaaaactatactccaaa----tatgttttagtttttttaataagtgtga 8712038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 316 - 453
Target Start/End: Original strand, 35525602 - 35525737
Alignment:
Q  316 aaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaac 415  Q
    ||||||||||| ||||||||| |||||| |       ||||| ||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||    
T  35525602 aaaattacattaaattttctctctcttttattttttccataaccaatagtcaatgaaaattgtttttacatcttcctgtaaaacttttttcaaagaaaac 35525701  T
Q  416 acaaaaaattatacttcaaattcttatgttttagtttt 453  Q
    ||  |||| ||||||  |||||||||||||||||||||    
T  35525702 ac--aaaactatactctaaattcttatgttttagtttt 35525737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 295 - 467
Target Start/End: Complemental strand, 8709950 - 8709780
Alignment:
Q  295 ttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcctat 394  Q
    ||||||||||| ||||||||| ||||||||||||||||||||  ||||  |       |||||   |||||||||||||| ||||||||| || ||| ||    
T  8709950 ttattctcataaaattaaatgcaaattacattcaattttctc--tcttctattttctccataacatatagtcaatgaaaaatgtttttacttcttcccat 8709853  T
Q  395 aaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
     | |||| ||||||||||||||||||||| |||||| |||||||||||||||||||||| ||| ||| |||||    
T  8709852 gagacttatttcaaagaaaacacaaaaaactatactccaaattcttatgttttagtttttttattaagtgtga 8709780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 293 - 464
Target Start/End: Complemental strand, 15824799 - 15824634
Alignment:
Q  293 gtttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcct 392  Q
    ||||||||||||  |||||||||||||||||||| ||||||||| ||||| ||       ||||| |||||| ||||      |||||||||||| | |     
T  15824799 gtttattctcatgaaattaaatgaaaattacattaaattttctctctcttccatttttttcataaccaatagccaat------tgtttttacatctttcc 15824706  T
Q  393 ataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatg 464  Q
    || |||||| ||  ||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||    
T  15824705 atgaaacttattctaaagaaaacacaaaaaactatacttcaaattcttatgttttagttttcttactaaatg 15824634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 293 - 467
Target Start/End: Original strand, 7499718 - 7499881
Alignment:
Q  293 gtttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnnc-ataatcaatagtcaatgaaaattgtttttacatcatcc 391  Q
    ||||||||||||| ||||||||| |||||||||||||||||||| ||||||||       | |||| |||||| |||||||||||||||||||||| ||     
T  7499718 gtttattctcataaaattaaatgtaaattacattcaattttctctctctttcatttttttccataaccaatagccaatgaaaattgtttttacatcttc- 7499816  T
Q  392 tataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
               ||||||||||||| |||||| |||||||  |||||| ||||||||||||||||||||||||||||    
T  7499817 -----------tttcaaagaaaacgcaaaaagttatactctaaattcctatgttttagttttcttaataaatgtga 7499881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 366 - 466
Target Start/End: Complemental strand, 41362402 - 41362302
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgt 465  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||| ||||||||||| |||  | |||| |  ||||||||||||||||||||||||||    
T  41362402 caatgaaaattgtttttacatcttcctataaaacttatttcaaagataacacaaaaaactatgttacaaactactatgttttagttttcttaataaatgt 41362303  T
Q  466 g 466  Q
    |    
T  41362302 g 41362302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 393 - 467
Target Start/End: Original strand, 2052955 - 2053029
Alignment:
Q  393 ataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    ||||||||| ||  |||||||||||||||||||||||||| |||| ||||||||||||||||||||||| |||||    
T  2052955 ataaaacttattctaaagaaaacacaaaaaattatacttctaattattatgttttagttttcttaataagtgtga 2053029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 366 - 465
Target Start/End: Original strand, 8745648 - 8745747
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgt 465  Q
    |||||||||||||||||||||| ||||||||||||| ||||||  | ||||||| ||| |||  | |||| |  ||||||||||||||||||||||||||    
T  8745648 caatgaaaattgtttttacatcttcctataaaacttatttcaagaataacacaagaaactatgttgcaaactactatgttttagttttcttaataaatgt 8745747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 364 - 467
Target Start/End: Complemental strand, 33563608 - 33563501
Alignment:
Q  364 gtcaatgaaaattgtttttacatcatcctataaaactttttt----caaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaat 459  Q
    |||||||||||||||||||||||| ||| ||||||||| |||     ||| |||| ||||||| | ||| || |||||||||||||||| ||||||||||    
T  33563608 gtcaatgaaaattgtttttacatcttcccataaaacttatttaaaaaaaaaaaaatacaaaaagtaatattttaaattcttatgttttaattttcttaat 33563509  T
Q  460 aaatgtga 467  Q
    ||||||||    
T  33563508 aaatgtga 33563501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 366 - 467
Target Start/End: Original strand, 17336807 - 17336908
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgt 465  Q
    |||||||||||||||||||||| |||||||||| || |||||||||  |||||||||| |||  | |||| |  ||| |||||||||||||||||| |||    
T  17336807 caatgaaaattgtttttacatcttcctataaaatttatttcaaagatgacacaaaaaactatgttacaaactactatattttagttttcttaataagtgt 17336906  T
Q  466 ga 467  Q
    ||    
T  17336907 ga 17336908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 366 - 467
Target Start/End: Original strand, 34713594 - 34713695
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgt 465  Q
    |||||| |||| |||||||||| | ||| ||||||| ||||||  ||||||||||||||||||| ||||||   || || ||||||||||||||||||||    
T  34713594 caatgagaattatttttacatctttctagaaaacttatttcaagaaaaacacaaaaaattatacctcaaatcactaagtattagttttcttaataaatgt 34713693  T
Q  466 ga 467  Q
    ||    
T  34713694 ga 34713695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 366 - 467
Target Start/End: Original strand, 38072228 - 38072329
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgt 465  Q
    |||||||||||||||||||||  |  ||||||||||  |||||||| ||||||||||| |||  | |||| |  ||||||||||||||||||||||||||    
T  38072228 caatgaaaattgtttttacatttttttataaaacttaattcaaagataacacaaaaaactatgttacaaactactatgttttagttttcttaataaatgt 38072327  T
Q  466 ga 467  Q
    ||    
T  38072328 ga 38072329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 295 - 467
Target Start/End: Complemental strand, 4047060 - 4046887
Alignment:
Q  295 ttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcctat 394  Q
    ||||||||||  ||||||||| |||||||||| ||||||||| |||||| |       ||||| |||| | ||||||||||| |||||||||  | | ||    
T  4047060 ttattctcatgaaattaaatgcaaattacatttaattttctctctcttttattttttccataaccaattgccaatgaaaattatttttacatatttccat 4046961  T
Q  395 aaaacttttttcaaagaaaacaca-aaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
     |||||| ||  |||||||||||| ||||| ||| || |||||||||||  |||| |||||||||||| |||||    
T  4046960 gaaacttattataaagaaaacacacaaaaactatgctacaaattcttatactttaattttcttaataagtgtga 4046887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 366 - 467
Target Start/End: Original strand, 8712589 - 8712690
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgt 465  Q
    |||| ||||||||||||||||| | ||||||||||| || |||  | ||||||| ||| || ||| ||| ||  ||||||||||||||||||||||||||    
T  8712589 caataaaaattgtttttacatctttctataaaacttattccaataataacacaagaaactaaactgcaagttactatgttttagttttcttaataaatgt 8712688  T
Q  466 ga 467  Q
    ||    
T  8712689 ga 8712690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 366 - 467
Target Start/End: Original strand, 17713288 - 17713389
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgt 465  Q
    |||||||||||||||||| ||| ||||||||||||| |||||| || ||||||| ||| |||  | |||| |  |||||||||||||| ||||||| |||    
T  17713288 caatgaaaattgtttttaaatcttcctataaaacttatttcaaggataacacaagaaactatgttgcaaaatactatgttttagtttttttaataagtgt 17713387  T
Q  466 ga 467  Q
    ||    
T  17713388 ga 17713389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 415 - 461
Target Start/End: Original strand, 11158675 - 11158721
Alignment:
Q  415 cacaaaaaattatacttcaaattcttatgttttagttttcttaataa 461  Q
    |||||||||||||| | ||||||||||||||||||||||||||||||    
T  11158675 cacaaaaaattatattccaaattcttatgttttagttttcttaataa 11158721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 366 - 412
Target Start/End: Complemental strand, 26954487 - 26954441
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaa 412  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||||    
T  26954487 caatgaaaattgtttttacatcttcctataaaacttatttcaaagaa 26954441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 355 - 467
Target Start/End: Complemental strand, 44663895 - 44663786
Alignment:
Q  355 taatcaatagtcaatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttc 454  Q
    |||||||||| |||| |||||| |||||||||| | | |||||| || || ||||||||||||   ||| ||||||  ||||||||||  ||||||||||    
T  44663895 taatcaatagccaataaaaattatttttacatctttccataaaatttattccaaagaaaacac---aaactatactctaaattcttataatttagttttc 44663799  T
Q  455 ttaataaatgtga 467  Q
    ||||||| |||||    
T  44663798 ttaataagtgtga 44663786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 366 - 467
Target Start/End: Complemental strand, 2628259 - 2628158
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgt 465  Q
    ||||||||||| |||||||||| ||||||||||||| ||| || || ||||||| ||| |||  | |||| |  |||||||| ||||||||||||| |||    
T  2628259 caatgaaaattatttttacatcttcctataaaacttattttaaggataacacaagaaactatgttgcaaactactatgttttggttttcttaataagtgt 2628160  T
Q  466 ga 467  Q
    ||    
T  2628159 ga 2628158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 366 - 467
Target Start/End: Original strand, 3100019 - 3100120
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgt 465  Q
    |||||| |||| |||||||||| | | || |||||| || ||| || ||||||||||||||||| ||||||  ||| || |||||||||||||||| |||    
T  3100019 caatgagaattatttttacatctttccatgaaacttattccaacgagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgt 3100118  T
Q  466 ga 467  Q
    ||    
T  3100119 ga 3100120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 366 - 423
Target Start/End: Original strand, 8673446 - 8673503
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaa 423  Q
    |||||||||||||||||||||| || |||||||||| ||||||| | |||||||||||    
T  8673446 caatgaaaattgtttttacatcttcttataaaacttatttcaaatataacacaaaaaa 8673503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 396 - 461
Target Start/End: Original strand, 12108251 - 12108316
Alignment:
Q  396 aaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataa 461  Q
    |||||| ||||||||| |||||||||||||||||||||||||  ||  | ||||||||||||||||    
T  12108251 aaacttatttcaaagataacacaaaaaattatacttcaaattactaaatgttagttttcttaataa 12108316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 366 - 423
Target Start/End: Complemental strand, 25195141 - 25195085
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaa 423  Q
    |||||||||||||||||||||| |||||||||| || ||||||||| |||||||||||    
T  25195141 caatgaaaattgtttttacatcttcctataaaa-ttatttcaaagataacacaaaaaa 25195085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 366 - 467
Target Start/End: Original strand, 35344433 - 35344534
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgt 465  Q
    |||||| |||| |||||||||| | | || |||||| |||||| || ||||||||||||||||| ||||||   || || |||||||||||||||| |||    
T  35344433 caatgagaattatttttacatctttccatgaaacttatttcaaggagaacacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgt 35344532  T
Q  466 ga 467  Q
    ||    
T  35344533 ga 35344534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 366 - 467
Target Start/End: Complemental strand, 44411304 - 44411203
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgt 465  Q
    |||||| |||| |||||||||| | | || |||||| |||||| || || |||||||||||||||||||||   || || |||||||||||||||| |||    
T  44411304 caatgagaattatttttacatctttccatgaaacttatttcaaggagaatacaaaaaattatacttcaaatcactaagtgttagttttcttaataagtgt 44411205  T
Q  466 ga 467  Q
    ||    
T  44411204 ga 44411203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 415 - 467
Target Start/End: Original strand, 7756685 - 7756737
Alignment:
Q  415 cacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    |||||||| |||||||||||||| || |||||||| |||||||||||||||||    
T  7756685 cacaaaaagttatacttcaaattattgtgttttaggtttcttaataaatgtga 7756737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 411 - 467
Target Start/End: Complemental strand, 40773453 - 40773397
Alignment:
Q  411 aaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    |||||||| ||||||||||| |||||| |||| |||||||||| |||||||||||||    
T  40773453 aaaacacacaaaattatactccaaattgttatattttagtttttttaataaatgtga 40773397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 300 - 392
Target Start/End: Complemental strand, 3642130 - 3642039
Alignment:
Q  300 ctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcct 392  Q
    |||||| ||| ||||| |||||||||||||||||||| ||||||||       ||||| |||||| |||| ||||||||||||||||| ||||    
T  3642130 ctcataaaataaaatgcaaattacattcaattttctctctctttcattttttccataaccaatagccaat-aaaattgtttttacatcttcct 3642039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 367 - 422
Target Start/End: Complemental strand, 4038975 - 4038920
Alignment:
Q  367 aatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaa 422  Q
    ||||||||||||||||||||| || |||||||||| ||||||| | ||||||||||    
T  4038975 aatgaaaattgtttttacatcttcatataaaacttatttcaaaaataacacaaaaa 4038920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 498 - 537
Target Start/End: Original strand, 17692300 - 17692339
Alignment:
Q  498 agtaataaatttctcaactatgtgaaacctaaatccatca 537  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  17692300 agtactaaatttctcaactatgtgaaacctaaatccatca 17692339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 367 - 466
Target Start/End: Complemental strand, 28497232 - 28497133
Alignment:
Q  367 aatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtg 466  Q
    ||||||||||||||||||||| ||| ||||||||| |||||| || ||||||| ||| |||  | |||| |  ||| ||||  |||||||||||||||||    
T  28497232 aatgaaaattgtttttacatcttcccataaaacttatttcaaggataacacaagaaactatgttgcaaactactatatttttattttcttaataaatgtg 28497133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 359 - 405
Target Start/End: Original strand, 2052892 - 2052938
Alignment:
Q  359 caatagtcaatgaaaattgtttttacatcatcctataaaactttttt 405  Q
    |||||| |||||||||||||||||||||| ||| |||||||||||||    
T  2052892 caatagccaatgaaaattgtttttacatcttcccataaaactttttt 2052938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 357 - 466
Target Start/End: Original strand, 34899981 - 34900090
Alignment:
Q  357 atcaatagtcaatgaaaattgtttttacatcatcctataaaacttttttcaaagaa-aacacaaaaaattatacttcaaattcttatgttttagttttct 455  Q
    |||||||  |||| |||||| |||||| ||| ||||||||||||| || | ||||  ||||||||||| ||||   |||||| |||||||||||||||||    
T  34899981 atcaataaccaatcaaaattatttttaaatcctcctataaaacttatt-ctaagaggaacacaaaaaaatatatcgcaaattattatgttttagttttct 34900079  T
Q  456 taataaatgtg 466  Q
    |||||| ||||    
T  34900080 taataagtgtg 34900090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 366 - 467
Target Start/End: Original strand, 27621196 - 27621297
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgt 465  Q
    |||||| |||| |||||||||| | | || |||||| || |||  | ||||||||||||||||||||||||   || || |||||||||||||||| |||    
T  27621196 caatgagaattatttttacatctttccatgaaacttattccaagtagaacacaaaaaattatacttcaaatcactaagtgttagttttcttaataagtgt 27621295  T
Q  466 ga 467  Q
    ||    
T  27621296 ga 27621297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 366 - 467
Target Start/End: Original strand, 27752652 - 27752753
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgt 465  Q
    |||||| |||| |||||||||| | | || |||||| || ||| || ||||||||||||||||| ||||||   || || |||||||||||||||| |||    
T  27752652 caatgagaattatttttacatctttccatgaaacttattccaaggagaacacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgt 27752751  T
Q  466 ga 467  Q
    ||    
T  27752752 ga 27752753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 293 - 341
Target Start/End: Complemental strand, 13144129 - 13144081
Alignment:
Q  293 gtttattctcatagaattaaatgaaaattacattcaattttctccctct 341  Q
    ||||||| ||||| ||||||||| |||||||||||||||||||| ||||    
T  13144129 gtttattttcataaaattaaatgcaaattacattcaattttctctctct 13144081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 366 - 461
Target Start/End: Original strand, 6401685 - 6401780
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataa 461  Q
    ||||| |||||||||||||||| |  ||  |||||| ||||||  | ||||||||||| |||||| ||||||  ||| |||||| |||||||||||    
T  6401685 caatggaaattgtttttacatctttttaggaaacttatttcaagaataacacaaaaaactatactacaaattactatattttagatttcttaataa 6401780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 365 - 416
Target Start/End: Original strand, 14693433 - 14693484
Alignment:
Q  365 tcaatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaaca 416  Q
    ||||||||||||||||||||||| || ||||||| || ||||||||| ||||    
T  14693433 tcaatgaaaattgtttttacatcttcttataaaatttatttcaaagataaca 14693484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 379 - 461
Target Start/End: Original strand, 37598148 - 37598230
Alignment:
Q  379 ttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataa 461  Q
    ||||||||| | | || |||||| |||||| || ||||||||||||||||| ||||||   || || ||||||||||||||||    
T  37598148 ttttacatctttccatgaaacttatttcaaggagaacacaaaaaattatacctcaaatcagtaagtgttagttttcttaataa 37598230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 293 - 409
Target Start/End: Original strand, 41755918 - 41756033
Alignment:
Q  293 gtttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcct 392  Q
    ||||||| ||||  ||||||||| ||||||||||||||||| || ||||||||       ||||| ||||| |||||||| ||| |||||||||  | ||    
T  41755918 gtttattatcatgaaattaaatgtaaattacattcaattttttctctctttca-tttttccataagcaataatcaatgaacattatttttacatttttct 41756016  T
Q  393 ataaaacttttttcaaa 409  Q
    |||||| || |||||||    
T  41756017 ataaaatttatttcaaa 41756033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 417 - 467
Target Start/End: Original strand, 45190700 - 45190750
Alignment:
Q  417 caaaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    ||||||| ||| || ||||||||||||||||||||||||||| || |||||    
T  45190700 caaaaaactatgctccaaattcttatgttttagttttcttaacaagtgtga 45190750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 295 - 336
Target Start/End: Original strand, 2052830 - 2052871
Alignment:
Q  295 ttattctcatagaattaaatgaaaattacattcaattttctc 336  Q
    ||||||||||  ||||||||| ||||||||||||||||||||    
T  2052830 ttattctcatgaaattaaatgcaaattacattcaattttctc 2052871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 366 - 467
Target Start/End: Original strand, 5217457 - 5217557
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgt 465  Q
    |||| ||||||||||||||||| | |||| |||||| |||||| || ||||||| ||| ||  || ||| | | |||||| ||||||||||||||| |||    
T  5217457 caataaaaattgtttttacatctttctatgaaacttatttcaaggataacacaagaaactacgctgcaactac-tatgttatagttttcttaataagtgt 5217555  T
Q  466 ga 467  Q
    ||    
T  5217556 ga 5217557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 366 - 467
Target Start/End: Original strand, 11044123 - 11044224
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgt 465  Q
    |||||| |||| |||||||||| |   || |||||| || ||| || ||||||||||||||||| ||||||   || || |||||||||||||||| |||    
T  11044123 caatgagaattatttttacatctttacatgaaacttattccaaggagaacacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgt 11044222  T
Q  466 ga 467  Q
    ||    
T  11044223 ga 11044224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 366 - 467
Target Start/End: Complemental strand, 24612575 - 24612474
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgt 465  Q
    |||||| |||| |||||||||||| | || |||||| || ||| || |||| |||||||||||| ||||||   || || ||| |||||||||||| |||    
T  24612575 caatgagaattatttttacatcattccatgaaacttattccaaggagaacataaaaaattatacctcaaatcactaagtgttaattttcttaataagtgt 24612476  T
Q  466 ga 467  Q
    ||    
T  24612475 ga 24612474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 366 - 467
Target Start/End: Complemental strand, 31133124 - 31133023
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgt 465  Q
    |||||| |||| |||||||||| | | || ||| || || ||| || ||||||||||||||||| ||||||   || || |||||||||||||||| |||    
T  31133124 caatgagaattatttttacatctttccatgaaatttattccaaggagaacacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgt 31133025  T
Q  466 ga 467  Q
    ||    
T  31133024 ga 31133023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 366 - 467
Target Start/End: Original strand, 35260123 - 35260224
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgt 465  Q
    |||||| |||| |||||||||| | | || |||||| || ||| || |||||||||||| |||| ||||||   || || |||||||||||||||| |||    
T  35260123 caatgagaattatttttacatctttccatgaaacttattccaaggagaacacaaaaaatgatacctcaaatcactaagtgttagttttcttaataagtgt 35260222  T
Q  466 ga 467  Q
    ||    
T  35260223 ga 35260224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 366 - 467
Target Start/End: Complemental strand, 35346399 - 35346298
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgt 465  Q
    |||||| |||| |||||||||| | | || ||| || |||||| || ||||||||||||||||| ||||||   ||  | ||| ||||||||||||||||    
T  35346399 caatgagaattatttttacatctttccatgaaatttatttcaaggagaacacaaaaaattatacctcaaatcactaaatattaattttcttaataaatgt 35346300  T
Q  466 ga 467  Q
    ||    
T  35346299 ga 35346298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 366 - 467
Target Start/End: Original strand, 44052687 - 44052788
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgt 465  Q
    |||||| |||| |||||||||| | | | ||||||| || ||| || ||||||||||||||||| ||||||   |  || |||||||||||||||| |||    
T  44052687 caatgagaattatttttacatctttccagaaaacttattccaaggagaacacaaaaaattatacctcaaatcactgagtgttagttttcttaataagtgt 44052786  T
Q  466 ga 467  Q
    ||    
T  44052787 ga 44052788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 124; Significance: 2e-63; HSPs: 64)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 227 - 467
Target Start/End: Original strand, 18102457 - 18102698
Alignment:
Q  227 cacattttctttgtcccaaaatataagnnnnnnngacaaacttttatctttttcaatannnnnnnn-gtttattctcatagaattaaatgaaaattacat 325  Q
    |||||||||||||||||||||||||||       |||||||||||||||||||||| |         ||||||||||||| ||||||||| |||||||||    
T  18102457 cacattttctttgtcccaaaatataagcaaaaaagacaaacttttatctttttcaagatttttttttgtttattctcataaaattaaatgcaaattacat 18102556  T
Q  326 tcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaatt 425  Q
    ||||||||| | ||||||||       ||||| |||| | |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  18102557 tcaattttcactctctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaacttttttcaaagaaaacacaaaaaatt 18102656  T
Q  426 atacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    ||||| |||||||||||||||||||||||||||||| |||||    
T  18102657 atactccaaattcttatgttttagttttcttaataagtgtga 18102698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 230 - 467
Target Start/End: Complemental strand, 46760487 - 46760249
Alignment:
Q  230 attttctttgtcccaaaatataagnnnnnnngacaaacttttatctttttcaatannnnnnnngt-ttattctcatagaattaaatgaaaattacattca 328  Q
    ||||||||||||||||||||||||       ||||||||||||| ||||||||||         | ||||||||||| ||||||||| ||||||||||||    
T  46760487 attttctttgtcccaaaatataagtaaaaaagacaaacttttatttttttcaatattttttttttgttattctcataaaattaaatgcaaattacattca 46760388  T
Q  329 attttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattata 428  Q
    || |||||  |||||||       ||||| |||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  46760387 atattctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaacttttttcaaagaaaacacaaaaaactata 46760288  T
Q  429 cttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    || |||||||||||||||||||||||||||||| |||||    
T  46760287 ctccaaattcttatgttttagttttcttaataagtgtga 46760249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 293 - 467
Target Start/End: Original strand, 6191039 - 6191213
Alignment:
Q  293 gtttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcct 392  Q
    ||||||||||||| |||||||||||||||||||| |||||| || ||||||||       ||||| |||||| |||||||||||||||||||||| ||||    
T  6191039 gtttattctcataaaattaaatgaaaattacatttaattttatctctctttcattttctccataaccaatagccaatgaaaattgtttttacatcttcct 6191138  T
Q  393 ataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    ||||||||||||| ||||||||||||||||| |||||| |||||||||||||||||||||||||||||| |||||    
T  6191139 ataaaacttttttaaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgtga 6191213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 227 - 467
Target Start/End: Original strand, 14805798 - 14806037
Alignment:
Q  227 cacattttctttgtcccaaaatataagnnnnnnngacaaacttttatctttttcaatannnnnnnngtttattctcatagaattaaatgaaaattacatt 326  Q
    |||||||||||||||||||||||||||       |||||||||||||||||| ||| |          ||||||||||| ||||||||| ||||||||||    
T  14805798 cacattttctttgtcccaaaatataagcaaaacagacaaacttttatcttttccaagatttttttttgttattctcataaaattaaatgcaaattacatt 14805897  T
Q  327 caattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaatta 426  Q
    ||||||||||  |||||||       ||||| |||||| |||||||||||||||||||||| ||||||||||||||| |||||||||| |||||||| ||    
T  14805898 caattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttt-tcaaagaaaatacaaaaaacta 14805996  T
Q  427 tacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    |||| |||||||||||||||||||||||||||||| |||||    
T  14805997 tactccaaattcttatgttttagttttcttaataagtgtga 14806037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 227 - 467
Target Start/End: Original strand, 15252792 - 15253031
Alignment:
Q  227 cacattttctttgtcccaaaatataagnnnnnnngacaaacttttatctttttcaatannnnnnnngtttattctcatagaattaaatgaaaattacatt 326  Q
    |||||||||||||||||||||||||||       |||||||||||||||||| ||| |          ||||||||||| ||||||||| ||||||||||    
T  15252792 cacattttctttgtcccaaaatataagcaaaacagacaaacttttatcttttccaagatttttttttgttattctcataaaattaaatgcaaattacatt 15252891  T
Q  327 caattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaatta 426  Q
    ||||||||||  |||||||       ||||| |||||| |||||||||||||||||||||| ||||||||||||||| |||||||||| |||||||| ||    
T  15252892 caattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttt-tcaaagaaaatacaaaaaacta 15252990  T
Q  427 tacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    |||| |||||||||||||||||||||||||||||| |||||    
T  15252991 tactccaaattcttatgttttagttttcttaataagtgtga 15253031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 293 - 461
Target Start/End: Original strand, 25944570 - 25944738
Alignment:
Q  293 gtttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcct 392  Q
    ||||||||||||| ||||||||| |||||||||||||||||||| |||||| |       ||||| |||| | |||||||||||||||||||||| ||||    
T  25944570 gtttattctcataaaattaaatgcaaattacattcaattttctctctcttttattttttccataaccaatggccaatgaaaattgtttttacatcttcct 25944669  T
Q  393 ataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataa 461  Q
    |||||||||||| ||||||||||||||||| ||||||| ||||||||||| ||||||||||||||||||    
T  25944670 ataaaactttttccaaagaaaacacaaaaacttatactccaaattcttatattttagttttcttaataa 25944738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 295 - 467
Target Start/End: Original strand, 45485951 - 45486123
Alignment:
Q  295 ttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcctat 394  Q
    ||||||||||| ||||||||| ||||||||||||||||||||  |||||||       ||||| |||||| ||||||||||| |||||||||| ||||||    
T  45485951 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattatttttacatcttcctat 45486050  T
Q  395 aaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    |||||||||| |||||||||||||||||| |||||| |||||| ||||||||||||||||||||||| |||||    
T  45486051 aaaactttttccaaagaaaacacaaaaaactatactccaaatttttatgttttagttttcttaataagtgtga 45486123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 194 - 467
Target Start/End: Complemental strand, 19913034 - 19912761
Alignment:
Q  194 tactccctccgtctcataatataagtnnnnnnncacattttctttgtcccaaaatataagnnnnnnngacaaacttttatctttttcaatannnnnnnng 293  Q
    ||||||||||||| |||||||||||        |||||||||||| |||||||||||||        |||||||||||||||||| ||| |             
T  19913034 tactccctccgtcccataatataagcaaaataacacattttctttatcccaaaatataaataaaaaagacaaacttttatcttttccaagattttttttt 19912935  T
Q  294 tttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatccta 393  Q
     ||||||||||  ||||||||| ||||||||||||||||||||  |||||||       ||||| |||||  |||||||||||||||||||||  | |||    
T  19912934 gttattctcatgaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaataaccaatgaaaattgtttttacattttacta 19912835  T
Q  394 taaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    ||||||||||| |||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  19912834 taaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataaatgtga 19912761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 227 - 467
Target Start/End: Original strand, 35923180 - 35923419
Alignment:
Q  227 cacattttctttgtcccaaaatataagnnnnnnngacaaacttttatctttttcaatannnnnnnngtttattctcatagaattaaatgaaaattacatt 326  Q
    ||||||||||||||||||||||||||        || |||||||||||||||||||||          ||||||||||| ||||||||| ||||||||||    
T  35923180 cacattttctttgtcccaaaatataataaaaaaagataaacttttatctttttcaatatttttttttgttattctcataaaattaaatgcaaattacatt 35923279  T
Q  327 caattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaatta 426  Q
    ||||||||||  |||||||       ||||| |||||| |||||||||||||||||||||| | |||||||||||||| |||||||||||| ||||| ||    
T  35923280 caattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatctttctataaaactttttccaaagaaaacac-aaaaacta 35923378  T
Q  427 tacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    |||| |||||| ||||||||||||||||||||||| |||||    
T  35923379 tactccaaatttttatgttttagttttcttaataagtgtga 35923419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 295 - 467
Target Start/End: Complemental strand, 25737791 - 25737619
Alignment:
Q  295 ttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcctat 394  Q
    ||||||||||| ||||||||| ||||||||||||||||||||  |||||||       ||||| |||||| |||||||||||||||||||||| ||||||    
T  25737791 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 25737692  T
Q  395 aaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    |||||||||| ||||||||||||| |||| |||||  |||||| ||||||||||||||||||||||| |||||    
T  25737691 aaaactttttccaaagaaaacacacaaaactataccccaaatttttatgttttagttttcttaataagtgtga 25737619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 293 - 467
Target Start/End: Complemental strand, 4910799 - 4910627
Alignment:
Q  293 gtttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcct 392  Q
    |||||| |||||| ||||||||| ||||||||||||||||| || ||||||||       |||||||||||| ||||||||||| |||||||||| ||||    
T  4910799 gtttatgctcataaaattaaatgcaaattacattcaattttatctctctttcattttttccataatcaatagccaatgaaaattatttttacatcttcct 4910700  T
Q  393 ataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    ||||||||||||  ||||||||||||||||  ||||||||||||||||||||||||||||| | ||||| |||||    
T  4910699 ataaaactttttctaaagaaaacacaaaaa--tatacttcaaattcttatgttttagttttttaaataagtgtga 4910627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 293 - 448
Target Start/End: Complemental strand, 20123846 - 20123691
Alignment:
Q  293 gtttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcct 392  Q
    ||||||||||||| ||||||||| |||||||||||||||||||  ||||||||       ||||| |||||| |||||||||||||||||||||| | ||    
T  20123846 gtttattctcataaaattaaatgcaaattacattcaattttctttctctttcattttttccataagcaatagccaatgaaaattgtttttacatcttgct 20123747  T
Q  393 ataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgtttta 448  Q
    |||||||||||| ||||||| |||||||||| |||||| |||||||||||||||||    
T  20123746 ataaaactttttccaaagaatacacaaaaaactatactccaaattcttatgtttta 20123691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 359 - 467
Target Start/End: Complemental strand, 12632444 - 12632336
Alignment:
Q  359 caatagtcaatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaa 458  Q
    |||||| |||||||||||||||||||||| |||||| ||||||||||||||||||||| |||||| |||||| ||||||||||||||||| |||||||||    
T  12632444 caatagccaatgaaaattgtttttacatcttcctatgaaacttttttcaaagaaaacataaaaaactatactccaaattcttatgttttaattttcttaa 12632345  T
Q  459 taaatgtga 467  Q
    |||||||||    
T  12632344 taaatgtga 12632336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 295 - 467
Target Start/End: Original strand, 22632085 - 22632257
Alignment:
Q  295 ttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcctat 394  Q
    ||||||||||  ||||||||| |||||||||| ||||||||| ||||| ||       ||||| |||||  |||||||||||||||||||||| ||| ||    
T  22632085 ttattctcatgaaattaaatgcaaattacatttaattttctctctcttccattttttccataaccaatatccaatgaaaattgtttttacatcttcccat 22632184  T
Q  395 aaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
     |||||| ||||||||||||||||||||  ||| || |||| | ||||| ||||||||||||||||| |||||    
T  22632185 gaaacttatttcaaagaaaacacaaaaatctatgctacaaacttttatgctttagttttcttaataagtgtga 22632257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 293 - 467
Target Start/End: Original strand, 44682872 - 44683045
Alignment:
Q  293 gtttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcct 392  Q
    ||||||||||||  |||||| || ||||||||| |||||||||   |||||||       ||||| ||||||||||||||||||||||||||||| ||      
T  44682872 gtttattctcatgaaattaattgcaaattacatccaattttctatatctttcatttctc-cataaccaatagtcaatgaaaattgtttttacatcttcgc 44682970  T
Q  393 ataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    || |||||| || |||| ||||||||||| |||||||| ||||||||||| || ||||||||||||| |||||||    
T  44682971 atcaaacttattccaaaaaaaacacaaaatattatactccaaattcttattttctagttttcttaatgaatgtga 44683045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 295 - 467
Target Start/End: Original strand, 47779600 - 47779772
Alignment:
Q  295 ttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcctat 394  Q
    ||||||||||  ||||||||| |||||||||| |||||||||  ||||| |       ||||| || | | |||||||||||||||||||||| ||| ||    
T  47779600 ttattctcatgaaattaaatgcaaattacatttaattttctctttcttttattttttccataaccagttgccaatgaaaattgtttttacatcttcccat 47779699  T
Q  395 aaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
     |||||| ||  ||||||||||||||||| ||| || |||||||||||| ||||||||||||||||| |||||    
T  47779700 gaaacttattctaaagaaaacacaaaaaactatgctacaaattcttatgctttagttttcttaataagtgtga 47779772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 293 - 436
Target Start/End: Complemental strand, 47557767 - 47557622
Alignment:
Q  293 gtttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcct 392  Q
    ||||||||||||||||||||||| |||||||||| ||||||||  ||||||||       |||||| ||||| |||||||||||||||||||||| ||||    
T  47557767 gtttattctcatagaattaaatgcaaattacatttaattttctttctctttcattttttccataattaatagccaatgaaaattgtttttacatcttcct 47557668  T
Q  393 ataaaactttttt--caaagaaaacacaaaaaattatacttcaaat 436  Q
    |||||  ||||||   ||| ||||||||||||| |||||| |||||    
T  47557667 ataaattttttttaaaaaaaaaaacacaaaaaactatactccaaat 47557622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 353 - 467
Target Start/End: Original strand, 16917525 - 16917639
Alignment:
Q  353 cataatcaatagtcaatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttt 452  Q
    ||||| ||||||| ||||||||||||||||||||| ||| || |||||| || ||||||||| ||||||  ||||| |||||||| |||||||||| |||    
T  16917525 cataaccaatagttaatgaaaattgtttttacatcttcccatgaaacttattccaaagaaaaaacaaaatgttatatttcaaatttttatgttttaattt 16917624  T
Q  453 tcttaataaatgtga 467  Q
    ||||||||| |||||    
T  16917625 tcttaataagtgtga 16917639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 295 - 461
Target Start/End: Original strand, 14574560 - 14574726
Alignment:
Q  295 ttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcctat 394  Q
    ||||||||||| ||||||||| |||||| | ||||||||| | ||||| ||       ||||| |||||| ||||| ||||| |||||||||| ||| ||    
T  14574560 ttattctcataaaattaaatgcaaattaaaatcaattttcactctcttccattttcttcataaccaatagacaatggaaattatttttacatcttcccat 14574659  T
Q  395 aaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataa 461  Q
     |||||| ||   |||||||||||||||| |||||| ||||||||||| |||| |||||||||||||    
T  14574660 gaaacttattatcaagaaaacacaaaaaactatactccaaattcttatattttggttttcttaataa 14574726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 367 - 467
Target Start/End: Complemental strand, 35888061 - 35887961
Alignment:
Q  367 aatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtg 466  Q
    ||||||||||||||||||||| |||||||||| || ||||||||| |||||||||||||||  | |||| |  |||||||||||||| ||||||| ||||    
T  35888061 aatgaaaattgtttttacatcttcctataaaagttatttcaaagataacacaaaaaattatgttacaaactactatgttttagtttttttaataagtgtg 35887962  T
Q  467 a 467  Q
    |    
T  35887961 a 35887961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 293 - 453
Target Start/End: Original strand, 11780012 - 11780171
Alignment:
Q  293 gtttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcct 392  Q
    ||||||||||||| ||||||||| |||||||||  |||||||||  |||| ||       |||||  |||||||||||||| || |||||||||| |||     
T  11780012 gtttattctcataaaattaaatgcaaattacatcaaattttctctttcttccattttcttcataagaaatagtcaatgaaa-ttatttttacatcttcca 11780110  T
Q  393 ataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagtttt 453  Q
    |||||| || ||| ||||||||||| ||||| |||| | ||||||||||| ||||||||||    
T  11780111 ataaaatttattttaaagaaaacacgaaaaactatattccaaattcttatattttagtttt 11780171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 354 - 423
Target Start/End: Complemental strand, 35068954 - 35068885
Alignment:
Q  354 ataatcaatagtcaatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaa 423  Q
    |||| ||||||  ||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  35068954 ataaccaatagctaattaaaattgtttttacatcttcctataaaacttttttcaaagaaaacacaaaaaa 35068885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 368 - 467
Target Start/End: Complemental strand, 37767110 - 37767011
Alignment:
Q  368 atgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    |||||||||||||||| ||  ||| || ||| |  ||| ||||||||||||||||| |||||| |||||| | |||||||||||||||||||||||||||    
T  37767110 atgaaaattgtttttatatgttcccatgaaattagttttaaagaaaacacaaaaaactatactccaaattatcatgttttagttttcttaataaatgtga 37767011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 366 - 461
Target Start/End: Original strand, 40560444 - 40560539
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataa 461  Q
    |||||| |||| |||||||||| | ||||||||||| |||||| || ||||||||||||||||| ||||||| ||| || |||||||| |||||||    
T  40560444 caatgagaattatttttacatctttctataaaacttatttcaaggagaacacaaaaaattatacctcaaattattaagtgttagtttttttaataa 40560539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 366 - 467
Target Start/End: Original strand, 10248595 - 10248698
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaa-aaaattatacttcaaa-ttcttatgttttagttttcttaataaat 463  Q
    |||||||||||||||||||||| | ||||||||||| |||||| || ||||||| |||| |||  | |||| | || |||||||||||||||||||||||    
T  10248595 caatgaaaattgtttttacatctttctataaaacttatttcaaggataacacaagaaaactatgttacaaactactaatgttttagttttcttaataaat 10248694  T
Q  464 gtga 467  Q
    ||||    
T  10248695 gtga 10248698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 295 - 461
Target Start/End: Original strand, 15995715 - 15995882
Alignment:
Q  295 ttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcctat 394  Q
    ||||||||||| ||||||||| |||||| | ||||||||| | ||||| ||       ||||| |||||  ||||| ||||| |||||||||| | | ||    
T  15995715 ttattctcataaaattaaatgcaaattaaaatcaattttcactctcttccattttcttcataaccaataaccaatggaaattatttttacatctttccat 15995814  T
Q  395 aaaacttttttcaaagaaaacacaaaaaat-tatacttcaaattcttatgttttagttttcttaataa 461  Q
     |||||| ||   ||||||||||||||||  |||||| ||||||||||| |||| |||||||||||||    
T  15995815 gaaacttattatgaagaaaacacaaaaaaactatactccaaattcttatattttggttttcttaataa 15995882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 365 - 423
Target Start/End: Complemental strand, 31769056 - 31768998
Alignment:
Q  365 tcaatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaa 423  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||||  ||||||||||    
T  31769056 tcaatgaaaattgtttttacatcttcctataaaacttatttcaaagatgacacaaaaaa 31768998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 373 - 467
Target Start/End: Original strand, 33153108 - 33153202
Alignment:
Q  373 aattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    ||||||||||||||| | | |||||| || ||||||  | ||||||||||||||||||||||| | ||||||||| ||||| ||||||| |||||    
T  33153108 aattgtttttacatctttccataaaatttatttcaagaagaacacaaaaaattatacttcaaactattatgtttttgtttttttaataagtgtga 33153202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 375 - 467
Target Start/End: Complemental strand, 2633421 - 2633329
Alignment:
Q  375 ttgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    ||||||||||||| |||| ||||| || ||| || || ||||| |||| || ||| | ||||| |||||||||||||||||||||||||||||    
T  2633421 ttgtttttacatcttcctgtaaaatttattttaaggagaacaccaaaagttttacctaaaattattatgttttagttttcttaataaatgtga 2633329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 227 - 336
Target Start/End: Complemental strand, 12633219 - 12633110
Alignment:
Q  227 cacattttctttgtcccaaaatataagnnnnnnngacaaacttttatctttttcaatannnnnnnngtttattctcatagaattaaatgaaaattacatt 326  Q
    |||||||| |||||||||||||||||        |||||||||||||||||| ||| |        ||||||||||||| ||||||||| ||||||||||    
T  12633219 cacattttttttgtcccaaaatataatcaaaatagacaaacttttatcttttccaagattttttttgtttattctcataaaattaaatgcaaattacatt 12633120  T
Q  327 caattttctc 336  Q
    ||||||||||    
T  12633119 caattttctc 12633110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 366 - 461
Target Start/End: Original strand, 3157498 - 3157593
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataa 461  Q
    |||||| |||| |||||||||| | | || |||||| ||||||||| ||||||||||||||||| ||||||   || || ||||||||||||||||    
T  3157498 caatgagaattatttttacatctttccatgaaacttatttcaaagagaacacaaaaaattatacctcaaatcactaagtgttagttttcttaataa 3157593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 293 - 414
Target Start/End: Original strand, 9158084 - 9158204
Alignment:
Q  293 gtttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcct 392  Q
    ||||||||| ||| ||||||||| ||||||||||||| ||| |  ||||||||       ||||| |||| | ||| |||||||||||||||||| ||||    
T  9158084 gtttattcttataaaattaaatgcaaattacattcaaatttttttctctttcatttttt-cataaccaatggccaaagaaaattgtttttacatcttcct 9158182  T
Q  393 ataaaacttttttcaaagaaaa 414  Q
    ||||||||||||| ||| ||||    
T  9158183 ataaaactttttttaaaaaaaa 9158204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 353 - 453
Target Start/End: Original strand, 48413772 - 48413867
Alignment:
Q  353 cataatcaatagtcaatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttt 452  Q
    ||||| |||||||||||||||||||||||| |||| ||  ||||||||| ||   || |||||||  ||||||||||| |||||||||||||| ||||||    
T  48413772 cataaccaatagtcaatgaaaattgtttttgcatcttctcataaaacttatt---aaaaaaacac--aaaattatactccaaattcttatgttgtagttt 48413866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 366 - 461
Target Start/End: Original strand, 48879450 - 48879545
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataa 461  Q
    |||||| |||| |||||||||| | ||||||||||| || ||| || || |||||||||||||| ||||||  ||| || ||||||||||||||||    
T  48879450 caatgagaattatttttacatctttctataaaacttattccaaggagaatacaaaaaattatacctcaaatcattaagtgttagttttcttaataa 48879545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 367 - 465
Target Start/End: Original strand, 39170602 - 39170700
Alignment:
Q  367 aatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgt 465  Q
    ||||||||||||||||||||| || |||||||||| |||||| || ||||||| ||| |||  | |||| |  ||| ||||| ||||||||||||||||    
T  39170602 aatgaaaattgtttttacatcttcgtataaaacttatttcaaggataacacaataaactatgttacaaactactatattttaattttcttaataaatgt 39170700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 366 - 467
Target Start/End: Complemental strand, 43107957 - 43107856
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgt 465  Q
    |||||| |||| |||||||||| | | || |||||| || ||| || ||||||||||||||||| ||||||   || || ||||||||||||||||||||    
T  43107957 caatgagaattatttttacatctttccatgaaacttattccaaggagaacacaaaaaattatacctcaaatcactaagtgttagttttcttaataaatgt 43107858  T
Q  466 ga 467  Q
    ||    
T  43107857 ga 43107856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 366 - 461
Target Start/End: Complemental strand, 41815745 - 41815650
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataa 461  Q
    |||||| |||| |||||||||| | | ||||||||| || ||| || ||||||||||||||||| ||||||   || || ||||||||||||||||    
T  41815745 caatgagaattatttttacatctttccataaaacttattccaaggagaacacaaaaaattatacctcaaatcactaagtgttagttttcttaataa 41815650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 193 - 282
Target Start/End: Complemental strand, 47558013 - 47557924
Alignment:
Q  193 ttactccctccgtctcataatataagtnnnnnnncacattttctttgtcccaaaatataagnnnnnnngacaaacttttatctttttcaa 282  Q
    |||||||||||||| |||||||||||        |||||||||||||||||||||||||||       ||||||||||||| ||||||||    
T  47558013 ttactccctccgtcccataatataagaaaaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatgtttttcaa 47557924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 353 - 423
Target Start/End: Complemental strand, 31550009 - 31549939
Alignment:
Q  353 cataatcaatagtcaatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaa 423  Q
    ||||| |||| |||||||||| ||||||||||||| |||||||||| || ||  ||||||||| |||||||    
T  31550009 cataaccaattgtcaatgaaagttgtttttacatcttcctataaaatttattctaaagaaaacgcaaaaaa 31549939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 366 - 467
Target Start/End: Complemental strand, 19933107 - 19933006
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgt 465  Q
    ||||||||||| |||||||||| | | || |||||| || ||| || |||||||||||| |||| ||||||   || || |||||||||||||||| |||    
T  19933107 caatgaaaattatttttacatctttccatgaaacttattccaaggagaacacaaaaaatcatacctcaaatcactaagtgttagttttcttaataagtgt 19933008  T
Q  466 ga 467  Q
    ||    
T  19933007 ga 19933006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 366 - 467
Target Start/End: Original strand, 23106515 - 23106616
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgt 465  Q
    |||||| |||| |||||||||| | | || |||||| ||| || || ||||||||||||||||| ||||||   || || |||||||||||||||| |||    
T  23106515 caatgagaattatttttacatctttccatgaaacttattttaaggagaacacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgt 23106614  T
Q  466 ga 467  Q
    ||    
T  23106615 ga 23106616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 366 - 467
Target Start/End: Complemental strand, 32491159 - 32491058
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgt 465  Q
    ||||||||||| |||||||||| | | || |||||| ||  || || ||||||||||||||||| ||||||    | || ||||||||||||||||||||    
T  32491159 caatgaaaattatttttacatctttccatgaaacttattataaggagaacacaaaaaattatacatcaaatcaccaagtgttagttttcttaataaatgt 32491060  T
Q  466 ga 467  Q
    ||    
T  32491059 ga 32491058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 366 - 467
Target Start/End: Original strand, 35181254 - 35181355
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgt 465  Q
    |||||| |||| |||||||||| | | || |||||| || ||| || ||||||||||||||||| ||||||   || || |||||||||||||||| |||    
T  35181254 caatgagaattatttttacatctttccatgaaacttattccaaggagaacacaaaaaattatacctcaaatcagtaagtgttagttttcttaataagtgt 35181353  T
Q  466 ga 467  Q
    ||    
T  35181354 ga 35181355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 366 - 467
Target Start/End: Original strand, 41889233 - 41889334
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgt 465  Q
    |||||| |||| |||||||||| | | || |||||| |||||| || || |||||||||||||| ||||||   || || |||||||||||||||| |||    
T  41889233 caatgagaattatttttacatctttccatgaaacttatttcaaggagaatacaaaaaattatacatcaaatcactaagtgttagttttcttaataagtgt 41889332  T
Q  466 ga 467  Q
    ||    
T  41889333 ga 41889334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 366 - 467
Target Start/End: Original strand, 44600508 - 44600609
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgt 465  Q
    ||||||||||| |||||||||| | |  | |||||| ||  || || ||||||||||||||||| ||||||   || || ||||||||||||||||||||    
T  44600508 caatgaaaattatttttacatctttccttgaaacttattctaaggagaacacaaaaaattatacctcaaatcgctaagtgttagttttcttaataaatgt 44600607  T
Q  466 ga 467  Q
    ||    
T  44600608 ga 44600609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 293 - 441
Target Start/End: Complemental strand, 2610734 - 2610586
Alignment:
Q  293 gtttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcct 392  Q
    ||||||||||||  |||||| || |||||||||||||||||    ||||| ||       ||||| |||||| ||| ||||| |||||||||||| | ||    
T  2610734 gtttattctcatgaaattaagtgcaaattacattcaatttttcttctcttccattttctccataaccaatagccaaagaaaaatgtttttacatctttct 2610635  T
Q  393 ataaaacttttttcaaagaaaacacaaaaaattatacttcaaattctta 441  Q
    |||||  || || ||||| || | ||||||| |||||| ||||||||||    
T  2610634 ataaattttattccaaaggaagcgcaaaaaaatatactccaaattctta 2610586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 411 - 462
Target Start/End: Complemental strand, 19492441 - 19492390
Alignment:
Q  411 aaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaa 462  Q
    |||| ||||||| |||||||  ||||| ||||||||||||||||||||||||    
T  19492441 aaaatacaaaaagttatactctaaatttttatgttttagttttcttaataaa 19492390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 366 - 461
Target Start/End: Complemental strand, 19964246 - 19964151
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataa 461  Q
    ||||||||||| |||||||||| | | || |||||| || ||| || |||||||||||| |||| ||||||   || || ||||||||||||||||    
T  19964246 caatgaaaattatttttacatctttccatgaaacttattccaaggagaacacaaaaaatcatacctcaaatcactaagtgttagttttcttaataa 19964151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 354 - 401
Target Start/End: Complemental strand, 24151687 - 24151640
Alignment:
Q  354 ataatcaatagtcaatgaaaattgtttttacatcatcctataaaactt 401  Q
    |||| ||||| ||| ||||||||||||||||||| |||||||||||||    
T  24151687 ataaccaataatcagtgaaaattgtttttacatcttcctataaaactt 24151640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 373 - 467
Target Start/End: Complemental strand, 35084146 - 35084052
Alignment:
Q  373 aattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    ||||||||||||||| |  ||| |||||| ||||||  | ||||||||||| ||||  |||||||  | |||||||||||||||| ||| |||||    
T  35084146 aattgtttttacatctttttatgaaacttatttcaagaagaacacaaaaaactataactcaaattactgtgttttagttttcttattaagtgtga 35084052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 373 - 467
Target Start/End: Original strand, 42617740 - 42617834
Alignment:
Q  373 aattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    |||| |||||||||| | | || |||||| || ||| || ||||||||||||||||| ||||||  ||| || |||||||| ||||||| |||||    
T  42617740 aattatttttacatctttccatgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagtttttttaataagtgtga 42617834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 366 - 460
Target Start/End: Original strand, 47383468 - 47383562
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaata 460  Q
    |||||| |||| |||||||||| | | || |||||| ||| || || ||||||||||||||||  ||||||  ||| || |||||||||||||||    
T  47383468 caatgagaattatttttacatctttccatgaaacttattttaaggagaacacaaaaaattatatctcaaatcattaagtgttagttttcttaata 47383562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 366 - 467
Target Start/End: Complemental strand, 7989360 - 7989259
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgt 465  Q
    |||||| |||| |||||||||| | | || ||| || || ||| || ||||||||||||||||| ||||||   || || |||||||||||||||| |||    
T  7989360 caatgagaattatttttacatctttccatgaaatttattccaaggagaacacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgt 7989261  T
Q  466 ga 467  Q
    ||    
T  7989260 ga 7989259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 366 - 467
Target Start/End: Original strand, 9818530 - 9818631
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgt 465  Q
    |||||| |||| |||||||||| | | ||||||||| || ||| || |||| |||||||||||| ||||||   ||  | |||||||||||||||| |||    
T  9818530 caatgagaattatttttacatctttccataaaacttattccaaggagaacataaaaaattatacctcaaatcactaaatgttagttttcttaataagtgt 9818629  T
Q  466 ga 467  Q
    ||    
T  9818630 ga 9818631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 366 - 467
Target Start/End: Original strand, 10720455 - 10720556
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgt 465  Q
    |||||| |||| |||||||||| | | ||||||||| || ||| || |||| |||||||||||| ||||||   ||  | |||||||||||||||| |||    
T  10720455 caatgagaattatttttacatctttccataaaacttattccaaggagaacataaaaaattatacctcaaatcactaaatgttagttttcttaataagtgt 10720554  T
Q  466 ga 467  Q
    ||    
T  10720555 ga 10720556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 366 - 467
Target Start/End: Complemental strand, 18206371 - 18206270
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgt 465  Q
    |||||| |||| |||||||||| | | || |||||| || ||| || ||||||||||||||||| ||||||   || || ||| |||||||||||| |||    
T  18206371 caatgagaattatttttacatctttccatgaaacttattccaaggagaacacaaaaaattatacctcaaatcactaagtgttaattttcttaataagtgt 18206272  T
Q  466 ga 467  Q
    ||    
T  18206271 ga 18206270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 366 - 467
Target Start/End: Complemental strand, 22111382 - 22111281
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgt 465  Q
    |||||| |||| |||||||||| | | | |||| || || ||| || ||||||||||||||||| ||||||   || || |||||||||||||||| |||    
T  22111382 caatgagaattatttttacatctttccagaaaatttattccaaggagaacacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgt 22111283  T
Q  466 ga 467  Q
    ||    
T  22111282 ga 22111281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 366 - 467
Target Start/End: Original strand, 29713256 - 29713357
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgt 465  Q
    |||||||||||||||||||| | | |||| ||| || ||  |||||  |||||| ||| |||||| ||||   | |||| ||||||||||||||||||||    
T  29713256 caatgaaaattgtttttacaactttctatgaaagttattctaaagatgacacaagaaactatactacaaacaatgatgtcttagttttcttaataaatgt 29713355  T
Q  466 ga 467  Q
    ||    
T  29713356 ga 29713357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 366 - 467
Target Start/End: Original strand, 38260383 - 38260484
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgt 465  Q
    ||||||||||| |||||||| | | ||||||||||| ||||||  | ||||||||||| |||| | |||| |   |||||||| |||| ||||||| |||    
T  38260383 caatgaaaattatttttacaactttctataaaacttatttcaagaataacacaaaaaactatattacaaactacaatgttttaatttttttaataagtgt 38260482  T
Q  466 ga 467  Q
    ||    
T  38260483 ga 38260484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 366 - 467
Target Start/End: Original strand, 40583207 - 40583308
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgt 465  Q
    |||||| |||| |||||||||| | | | |||| || || ||| || ||||||||||||||||| ||||||   || || |||||||||||||||| |||    
T  40583207 caatgagaattatttttacatctttccagaaaatttattccaaggagaacacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgt 40583306  T
Q  466 ga 467  Q
    ||    
T  40583307 ga 40583308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 353 - 405
Target Start/End: Original strand, 4069057 - 4069109
Alignment:
Q  353 cataatcaatagtcaatgaaaattgtttttacatcatcctataaaactttttt 405  Q
    ||||| |||||  ||||||||||| |||||||||| | |||||||||||||||    
T  4069057 cataaccaataaccaatgaaaattctttttacatctttctataaaactttttt 4069109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 392 - 467
Target Start/End: Original strand, 4069253 - 4069331
Alignment:
Q  392 tataaaacttttttcaaagaaaacacaaaaaat---tatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    |||||||||| ||||||| ||||||||||||||   ||||  ||||||| | |||||||| ||||||| |||| |||||    
T  4069253 tataaaacttatttcaaaaaaaacacaaaaaattagtatatctcaaattttaatgttttaattttcttgataagtgtga 4069331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 293 - 333
Target Start/End: Complemental strand, 35069001 - 35068961
Alignment:
Q  293 gtttattctcatagaattaaatgaaaattacattcaatttt 333  Q
    |||||||||||||  |||||||| |||||||||||||||||    
T  35069001 gtttattctcataatattaaatgcaaattacattcaatttt 35068961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 366 - 461
Target Start/End: Original strand, 45598966 - 45599062
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaa-aattatacttcaaattcttatgttttagttttcttaataa 461  Q
    |||||| |||| |||||||||| | | || |||||| |||||| ||||| |||||| |||||||| ||||||   || || ||||||||||||||||    
T  45598966 caatgagaattatttttacatctttccatgaaacttatttcaaggaaaatacaaaaaaattatacctcaaatcactaagtgttagttttcttaataa 45599062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 122; Significance: 2e-62; HSPs: 89)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 293 - 467
Target Start/End: Complemental strand, 15959807 - 15959633
Alignment:
Q  293 gtttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcct 392  Q
    ||||||||||||| ||||||||| |||||||||||||||||||| |||||| |       ||||| |||||| |||||||||||||||||||||| ||||    
T  15959807 gtttattctcataaaattaaatgcaaattacattcaattttctctctctttaattttttccataaccaatagccaatgaaaattgtttttacatcttcct 15959708  T
Q  393 ataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  15959707 ataaaacttttttcaaagaaaacacaaaaaattatactccaaattcttatgttttagttttcttaataaatgtga 15959633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 227 - 467
Target Start/End: Complemental strand, 32624239 - 32623998
Alignment:
Q  227 cacattttctttgtcccaaaatataagnnnnnnngacaaacttttatctttttcaatannnnnnnn-gtttattctcatagaattaaatgaaaattacat 325  Q
    |||||||||||||||||||||||||||       |||||||||||||||||| ||| |         ||||||||||||| ||||||||| |||||||||    
T  32624239 cacattttctttgtcccaaaatataagcaaaaaagacaaacttttatcttttccaagatttttttttgtttattctcataaaattaaatgcaaattacat 32624140  T
Q  326 tcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaatt 425  Q
    ||||||||||| ||||||||       ||||| |||| | |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |    
T  32624139 tcaattttctctctctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaacttttttcaaagaaaacacaaaaaact 32624040  T
Q  426 atacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    | ||| |||||||||||||||||||||||||||||| |||||    
T  32624039 acactccaaattcttatgttttagttttcttaataattgtga 32623998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 227 - 467
Target Start/End: Complemental strand, 39555819 - 39555579
Alignment:
Q  227 cacattttctttgtcccaaaatataagnnnnnnngacaaacttttatctttttcaatannnnnnnngtttattctcatagaattaaatgaaaattacatt 326  Q
    |||||||||||||||||||||||||||       |||||||||||||||||| ||| |        ||||||||||||| ||||||||| ||||||||||    
T  39555819 cacattttctttgtcccaaaatataagcaaaaaagacaaacttttatcttttccaagattttttttgtttattctcataaaattaaatgcaaattacatt 39555720  T
Q  327 caattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaatta 426  Q
    |||| ||||| ||||||||       ||||| |||||| |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||  ||    
T  39555719 caatgttctctctctttcattttttccataaccaatagccaatgaaaattgtttttacatctttctataaaacttttttcaaagaaaacacaaaaaccta 39555620  T
Q  427 tacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    |||| ||||||||||||||||| |||||||||||| |||||    
T  39555619 tactccaaattcttatgttttaattttcttaataagtgtga 39555579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 227 - 467
Target Start/End: Complemental strand, 43667533 - 43667296
Alignment:
Q  227 cacattttctttgtcccaaaatataagnnnnnnngacaaacttttatctttttcaatannnnnnnngtttattctcatagaattaaatgaaaattacatt 326  Q
    ||||||||||||||| |||||||||||       |||||||||||||||||||||| |        ||||||||||||| ||||||||| ||||||||||    
T  43667533 cacattttctttgtctcaaaatataagcaaaaaagacaaacttttatctttttcaagattttttt-gtttattctcataaaattaaatgtaaattacatt 43667435  T
Q  327 caattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaatta 426  Q
    ||||||||||  |||||||       ||||| |||| | ||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||    
T  43667434 caattttctc--tctttcattttttccataaccaatggccaatgaaaattgtttttacgtcttcctataaaacttttttcaaagaaaacacaaaaaatta 43667337  T
Q  427 tacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    ||||| |||||||||||| ||| ||||||||||||||||||    
T  43667336 tactttaaattcttatgtcttaattttcttaataaatgtga 43667296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 227 - 459
Target Start/End: Complemental strand, 12449200 - 12448969
Alignment:
Q  227 cacattttctttgtcccaaaatataagnnnnnnngacaaacttttatctttttcaatannnnnnnngtttattctcatagaattaaatgaaaattacatt 326  Q
    |||||||||||||||||||||||||||       |||||||||||||||||| ||| |        ||||||||||||| ||||||||| ||||||||||    
T  12449200 cacattttctttgtcccaaaatataagcaaaaaagacaaacttttatcttttccaagattttttttgtttattctcataaaattaaatgcaaattacatt 12449101  T
Q  327 caattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaatta 426  Q
    |||||||||| |||||| |       ||||| |||| | |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||    
T  12449100 caattttctctctctttgattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaacttttttcaaagaaaacacaaaaaacta 12449001  T
Q  427 tacttcaaattcttatgttttagttttcttaat 459  Q
    |||| ||||||||||| ||||| ||||||||||    
T  12449000 tactccaaattcttat-ttttaattttcttaat 12448969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 227 - 467
Target Start/End: Original strand, 2125965 - 2126206
Alignment:
Q  227 cacattttctttgtcccaaaatataagnnnnnnngacaaacttttatctttttcaa-tannnnnnnngtttattctcatagaattaaatgaaaattacat 325  Q
    |||||||||||||||| ||||||||||       ||||||||||||||||||| || |         ||| ||||||||  ||||||||| |||||||||    
T  2125965 cacattttctttgtcctaaaatataagtaaaaaagacaaacttttatcttttttaaattttttttttgttcattctcattaaattaaatgcaaattacat 2126064  T
Q  326 tcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaatt 425  Q
    |||||||||||  |||||||       ||||| |||||| |||||||||||||||||||||| |||||||||||||||| |||||||||||||||||| |    
T  2126065 tcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaact 2126164  T
Q  426 atacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    ||| | ||||||||||||||||||||||||||||||||||||    
T  2126165 atattccaaattcttatgttttagttttcttaataaatgtga 2126206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 293 - 461
Target Start/End: Complemental strand, 7468130 - 7467961
Alignment:
Q  293 gtttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcct 392  Q
    ||||||||||||| ||||||||| |||||||||||||||||||  ||||||||       | |||||||||| ||||||||||||| |||||||| ||||    
T  7468130 gtttattctcataaaattaaatgcaaattacattcaattttctatctctttcatttttctcttaatcaatagccaatgaaaattgtatttacatcttcct 7468031  T
Q  393 ataaaacttttttcaaagaaaacacaaaaaatta-tacttcaaattcttatgttttagttttcttaataa 461  Q
     ||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  7468030 ttaaaactttttccaaagaaaacacaaaaaattattacttcaaattcttatgttttagttttcttaataa 7467961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 293 - 467
Target Start/End: Original strand, 45226132 - 45226306
Alignment:
Q  293 gtttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcct 392  Q
    ||||||||||||| ||||||||| |||||||||||||||||||  ||||||||       ||||| |||||||||||||||||||||||||| || ||||    
T  45226132 gtttattctcataaaattaaatgcaaattacattcaattttctatctctttcattttttccataaccaatagtcaatgaaaattgtttttacgtcttcct 45226231  T
Q  393 ataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    |||||||||||||||||||||| ||| |||| ||||||  ||||| ||||||||||||||||||||||| |||||    
T  45226232 ataaaacttttttcaaagaaaatacataaaactatactctaaattattatgttttagttttcttaataagtgtga 45226306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 295 - 467
Target Start/End: Original strand, 35691388 - 35691560
Alignment:
Q  295 ttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnnc-ataatcaatagtcaatgaaaattgtttttacatcatccta 393  Q
    ||||||||||| ||||||||| ||||||||||||||||||||  |||||||       | |||| |||||| |||| |||||||||||||||||  ||||    
T  35691388 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcatttttttccataaccaatagccaataaaaattgtttttacatctcccta 35691487  T
Q  394 taaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  35691488 taaaacttttttcaaagaaaacacaaaaaattatactccaaattcttatgttttag-tttcttaataaatgtga 35691560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 293 - 467
Target Start/End: Original strand, 33369547 - 33369718
Alignment:
Q  293 gtttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcct 392  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||  |||||||       ||||| |||||| |||||||||||||||||||||| || |    
T  33369547 gtttattctcataaaattaaatgcaaattacattcaattttctc--tctttcattttttccataaccaatagccaatgaaaattgtttttacatc-tcat 33369643  T
Q  393 ataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    |||||||||||| |||||||||||||||||| |||||| |||||| ||||||||||||||||||||||| |||||    
T  33369644 ataaaactttttccaaagaaaacacaaaaaactatactccaaatttttatgttttagttttcttaataagtgtga 33369718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 293 - 467
Target Start/End: Original strand, 6786832 - 6787006
Alignment:
Q  293 gtttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcct 392  Q
    ||||||||||||| ||||||||| ||| |||||||||||||| | ||||||||       ||||| |||||| ||||||||||||| |||||||| || |    
T  6786832 gtttattctcataaaattaaatgcaaactacattcaattttcactctctttcattttttccataaccaatagccaatgaaaattgtgtttacatcttcat 6786931  T
Q  393 ataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    |||||||||||| |||||||||||||||||| |||||| |||||||| ||||||||||||||||||||| |||||    
T  6786932 ataaaactttttccaaagaaaacacaaaaaactatactccaaattctcatgttttagttttcttaataagtgtga 6787006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 293 - 466
Target Start/End: Original strand, 6785450 - 6785622
Alignment:
Q  293 gtttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcct 392  Q
    ||||||||||||| ||||||||| ||| |||||||||||||||| ||||||||       ||||| |||||| |||||||||||||||||||||| || |    
T  6785450 gtttattctcataaaattaaatgcaaactacattcaattttctctctctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcat 6785549  T
Q  393 ataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtg 466  Q
    ||||||||||||  ||||||||||||||||| ||||| || |||||||||||||||||||||||||||| ||||    
T  6785550 ataaaactttttcaaaagaaaacacaaaaaactatac-tccaattcttatgttttagttttcttaataagtgtg 6785622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 295 - 467
Target Start/End: Original strand, 24190466 - 24190637
Alignment:
Q  295 ttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcctat 394  Q
    ||||||||||| ||||||||| |||||||||| |||||||||  |||||||       ||||| |||||| ||||||||||||||||||||||  | |||    
T  24190466 ttattctcataaaattaaatgcaaattacatt-aattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatctccgtat 24190564  T
Q  395 aaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    |||||||||| |||||||||||||||||| |||||| |||||||||||||||||||||||||||||| |||||    
T  24190565 aaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgtga 24190637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 293 - 461
Target Start/End: Complemental strand, 42965981 - 42965815
Alignment:
Q  293 gtttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcct 392  Q
    ||||||||| ||| ||||||||| |||||||||||||||||||| ||||||||       ||||| |||||| |||||||||||||||||||||| ||||    
T  42965981 gtttattcttataaaattaaatgcaaattacattcaattttctctctctttcatttttc-cataaccaatagccaatgaaaattgtttttacatcttcct 42965883  T
Q  393 ataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataa 461  Q
    |||||| ||||| |||||||||||||||||| || |||||||||| |||||||||||||||||||||||    
T  42965882 ataaaa-tttttccaaagaaaacacaaaaaactaaacttcaaatttttatgttttagttttcttaataa 42965815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 293 - 467
Target Start/End: Complemental strand, 28016911 - 28016739
Alignment:
Q  293 gtttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcct 392  Q
    ||||||||||||| ||||||||| || |||||||||||||||||  ||||| |        |||| |||||| |||||||||||||||||||||| ||||    
T  28016911 gtttattctcataaaattaaatgcaagttacattcaattttctc--tcttttattttttttataaccaatagccaatgaaaattgtttttacatcttcct 28016814  T
Q  393 ataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    ||||||| ||||||||||||||||| ||||| ||||||  ||||||||||||||||||||||||||||| |||||    
T  28016813 ataaaacatttttcaaagaaaacaccaaaaactatactctaaattcttatgttttagttttcttaataagtgtga 28016739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 293 - 467
Target Start/End: Complemental strand, 28120922 - 28120748
Alignment:
Q  293 gtttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcct 392  Q
    |||||||| |||| ||||||||| |||||||||||||||||||| ||||||||       |||||||||||| |||||||||||||||||||||| |||     
T  28120922 gtttattcacataaaattaaatgcaaattacattcaattttctctctctttcattttttccataatcaatagccaatgaaaattgtttttacatcttccc 28120823  T
Q  393 ataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    |||||| |  ||| ||| ||||||||||||| |||||| || |||||||| | ||||||||||||||||||||||    
T  28120822 ataaaattcattttaaaaaaaacacaaaaaactatactccacattcttatttcttagttttcttaataaatgtga 28120748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 293 - 467
Target Start/End: Complemental strand, 32983337 - 32983165
Alignment:
Q  293 gtttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcct 392  Q
    ||||||||||||| ||||||||| |||||| ||||||||||||| ||||||||       ||||| |||| | |||||||||||||||||||||| || |    
T  32983337 gtttattctcataaaattaaatgcaaattatattcaattttctctctctttcattttttccataaccaat-gccaatgaaaattgtttttacatcttctt 32983239  T
Q  393 ataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    |||||||||||  |||||||||||||||||| |||||||| |||| ||||||||||||||||||||||| |||||    
T  32983238 ataaaacttttc-caaagaaaacacaaaaaactatacttccaatttttatgttttagttttcttaataagtgtga 32983165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 293 - 467
Target Start/End: Original strand, 40718672 - 40718846
Alignment:
Q  293 gtttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcct 392  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||  |||||||        || | |||||| ||||||||||||||| |||| | || |    
T  40718672 gtttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttctattaccaatagccaatgaaaattgtttctacaacttcat 40718771  T
Q  393 ataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    ||||||||||||||||||||||||||||||| |||||| |||||| |||| ||||||||||| |||||| |||||    
T  40718772 ataaaacttttttcaaagaaaacacaaaaaactatactccaaatttttatattttagttttcgtaataagtgtga 40718846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 293 - 466
Target Start/End: Complemental strand, 47014657 - 47014487
Alignment:
Q  293 gtttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcct 392  Q
    ||||||||||||| ||||||||| |||| ||||||||||||||| ||||||||       ||||| ||||||||||||||||||||||||||||  ||||    
T  47014657 gtttattctcataaaattaaatgtaaat-acattcaattttctctctctttcattttttccataaccaatagtcaatgaaaattgtttttacattttcct 47014559  T
Q  393 ataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtg 466  Q
    |||||||||||||||| ||||||||||||||   |||| || |||||||||||||||||| |||| ||| ||||    
T  47014558 ataaaacttttttcaacgaaaacacaaaaaa--ctactccagattcttatgttttagtttacttagtaagtgtg 47014487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 353 - 467
Target Start/End: Original strand, 11241081 - 11241195
Alignment:
Q  353 cataatcaatagtcaatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttt 452  Q
    ||||| |||||| |||||||||||| ||||||||| |||||||||||||||| |||||||||||||||||| |||||| ||||||||||||||||| |||    
T  11241081 cataaccaatagccaatgaaaattggttttacatcttcctataaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttaattt 11241180  T
Q  453 tcttaataaatgtga 467  Q
    | ||||||| |||||    
T  11241181 ttttaataagtgtga 11241195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 293 - 463
Target Start/End: Original strand, 46542978 - 46543146
Alignment:
Q  293 gtttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcct 392  Q
    ||||||||||||| ||||||||| ||||| |||| |||||||||  |||||||       || || |||||| ||||| ||||||||||| |||| ||||    
T  46542978 gtttattctcataaaattaaatgcaaattgcatttaattttctc--tctttcattttctccacaaccaatagccaatggaaattgttttttcatcttcct 46543075  T
Q  393 ataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaat 463  Q
    |||||  |||||||||||||||||||||||| |||||| |||||| ||||||||||||||| |||||||||    
T  46543076 ataaattttttttcaaagaaaacacaaaaaactatactccaaatttttatgttttagtttttttaataaat 46543146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 293 - 466
Target Start/End: Complemental strand, 47600206 - 47600030
Alignment:
Q  293 gtttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcct 392  Q
    ||||||||||||| ||||||||| |||||||||||||||||||  ||||||||       ||||| |||||| |||||||||||||||||||||| ||||    
T  47600206 gtttattctcataaaattaaatgcaaattacattcaattttctttctctttcatttttttcataaacaatagccaatgaaaattgtttttacatcttcct 47600107  T
Q  393 ataaaacttttttca-aagaaaacacaaaaaat--tatacttcaaattcttatgttttagttttcttaataaatgtg 466  Q
    |||||||||||||   ||||  ||||||||||   ||||||  |||||||||||||||| |||| ||||||||||||    
T  47600106 ataaaactttttttttaagattacacaaaaaaaactatactctaaattcttatgttttaatttttttaataaatgtg 47600030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 293 - 467
Target Start/End: Complemental strand, 13136717 - 13136547
Alignment:
Q  293 gtttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcct 392  Q
    ||||||||| ||| ||||||||| |||||| |||||||||||||  |||||||       ||||| |||||| ||||| |||||||||||||||| ||||    
T  13136717 gtttattct-ataaaattaaatgcaaattatattcaattttctc--tctttcattttttccataaccaatagccaatggaaattgtttttacatcttcct 13136621  T
Q  393 ataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    ||||   |||||| ||||||||||||||||| |||||| ||||||||||||||||| |||||||||||| |||||    
T  13136620 ataattttttttt-aaagaaaacacaaaaaactatactccaaattcttatgttttaattttcttaataagtgtga 13136547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 293 - 467
Target Start/End: Original strand, 33431555 - 33431727
Alignment:
Q  293 gtttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcct 392  Q
    ||||||||||||| ||| ||||  |||||||||| |||||||||  |||||||        |||| |||||| ||||||||||||||||| |||| ||||    
T  33431555 gtttattctcataaaatgaaatacaaattacatttaattttctc--tctttcattttctctataaccaatagccaatgaaaattgtttttccatcctcct 33431652  T
Q  393 ataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    ||||||||||||| ||| ||||||||||||| ||| || |||||||||||| | ||||||||||||||| |||||    
T  33431653 ataaaacttttttaaaaaaaaacacaaaaaactatgctacaaattcttatgatctagttttcttaataagtgtga 33431727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 293 - 456
Target Start/End: Complemental strand, 39932739 - 39932576
Alignment:
Q  293 gtttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcct 392  Q
    ||||||||||||| ||||||||  |||||||||||||||||||| |||||| |       ||| | |||||| |||| ||||||||||||| ||| || |    
T  39932739 gtttattctcataaaattaaatacaaattacattcaattttctctctcttttattttctccatgaccaatagccaataaaaattgtttttatatcttctt 39932640  T
Q  393 ataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttctt 456  Q
    ||||||||| ||  ||| ||||||||||||| |||||| |||||||||||||||||||||||||    
T  39932639 ataaaacttattaaaaaaaaaacacaaaaaactatactccaaattcttatgttttagttttctt 39932576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 294 - 461
Target Start/End: Complemental strand, 46818668 - 46818501
Alignment:
Q  294 tttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatccta 393  Q
    |||||||||||| ||||||||  ||||||| |||| ||||||| |  |||||       |||||  | ||| |||||||||||||||||| ||| |||||    
T  46818668 tttattctcataaaattaaatacaaattacgttcagttttctctcaatttcattttctccataactattagccaatgaaaattgtttttatatcttccta 46818569  T
Q  394 taaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataa 461  Q
    ||||||||||||||||||||| |||||||| ||||||| |||||||||||||||  ||||||||||||    
T  46818568 taaaacttttttcaaagaaaatacaaaaaactatactttaaattcttatgtttttcttttcttaataa 46818501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 293 - 467
Target Start/End: Complemental strand, 3875188 - 3875012
Alignment:
Q  293 gtttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaata----gtcaatgaaaattgtttttacatca 388  Q
    ||||||||||||| ||||||||| ||||| |||||||||||||| ||||||||       ||||| |||||    | |||| ||||||||||||||||      
T  3875188 gtttattctcataaaattaaatgcaaatttcattcaattttctctctctttcattttttccataaccaatatatagccaataaaaattgtttttacatat 3875089  T
Q  389 tcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    ||||||||||||||||  ||| |||||||||||   |||||||||||||||||||||||| |||||||||||| |||||    
T  3875088 tcctataaaactttttcaaaaaaaaacacaaaac--tatacttcaaattcttatgttttacttttcttaataagtgtga 3875012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 293 - 461
Target Start/End: Original strand, 1820409 - 1820577
Alignment:
Q  293 gtttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcct 392  Q
    ||||||||||||| ||||||||| ||||||||||||||||| || ||||||||       ||||| ||| ||  |||||| ||| |||||||||| ||||    
T  1820409 gtttattctcataaaattaaatgcaaattacattcaattttttctctctttcatttttttcataaccaaaagctaatgaatatt-tttttacatcttcct 1820507  T
Q  393 ataaaacttttttcaaagaaaacacaa-aaaattatacttcaaattcttatgttttagttttcttaataa 461  Q
    |||||||||||| |||| ||| ||||| |||| |||| | ||||||||||||||||||||||||||||||    
T  1820508 ataaaactttttccaaaaaaagcacaataaaactatattccaaattcttatgttttagttttcttaataa 1820577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 307 - 467
Target Start/End: Complemental strand, 24728780 - 24728619
Alignment:
Q  307 aattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcctataaaacttttttc 406  Q
    ||||||||| |||||||||| ||||||||| |||||| |       |||||||||| | |||||||||||||||||||||| ||| || |||||| ||      
T  24728780 aattaaatgcaaattacatttaattttctctctcttttattttttccataatcaattgccaatgaaaattgtttttacatcttcccatgaaacttattcg 24728681  T
Q  407 aaagaaaacacaa-aaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    ||||||||||||| |||| ||| || |||||||||||||||||||||||||||||| |||||    
T  24728680 aaagaaaacacaaaaaaactatgctacaaattcttatgttttagttttcttaataagtgtga 24728619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 355 - 467
Target Start/End: Original strand, 52984989 - 52985101
Alignment:
Q  355 taatcaatagtcaatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttc 454  Q
    |||||||||| |||||||||||||||||||||| |||  | |||||| || |||||||||||||||||| |||||| ||||||||||||| |||||||||    
T  52984989 taatcaatagccaatgaaaattgtttttacatcttcccgtgaaacttattccaaagaaaacacaaaaaactatactccaaattcttatgtattagttttc 52985088  T
Q  455 ttaataaatgtga 467  Q
    ||||||| |||||    
T  52985089 ttaataagtgtga 52985101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 353 - 456
Target Start/End: Complemental strand, 3861802 - 3861699
Alignment:
Q  353 cataatcaatagtcaatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttt 452  Q
    |||||||||||| |||||||||||||||||||||| | | ||||||||| ||  |||||||||| |||||||||||||||||||| ||||||||||||||    
T  3861802 cataatcaatagccaatgaaaattgtttttacatctttcaataaaacttattctaaagaaaacataaaaaattatacttcaaattattatgttttagttt 3861703  T
Q  453 tctt 456  Q
    ||||    
T  3861702 tctt 3861699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 295 - 467
Target Start/End: Original strand, 3076291 - 3076463
Alignment:
Q  295 ttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcctat 394  Q
    ||||||||||  ||||||||| |||||||||| ||||||||| | |||| |       ||||| |||| | ||||||||||| |||||||||| ||| ||    
T  3076291 ttattctcatgaaattaaatgcaaattacatttaattttctctcacttttattttttccataaccaattgccaatgaaaattatttttacatcttcccat 3076390  T
Q  395 aaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    ||||||| || |||| ||||||||||||| ||| || |||||||||||| |||| |||||||||||| |||||    
T  3076391 aaaacttattccaaataaaacacaaaaaactatgctacaaattcttatgctttaattttcttaataagtgtga 3076463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 293 - 448
Target Start/End: Complemental strand, 2246181 - 2246026
Alignment:
Q  293 gtttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcct 392  Q
    ||||||||||||| ||||||||| |||||||||| ||||||||| ||||| ||       || ||  ||||| ||||||||||| |||||||||  ||||    
T  2246181 gtttattctcataaaattaaatgcaaattacatttaattttctctctcttccactttccccacaacgaatagccaatgaaaattctttttacatattcct 2246082  T
Q  393 ataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgtttta 448  Q
    ||||||||| ||||||||||||||||||||| ||||||  ||||| | ||||||||    
T  2246081 ataaaacttatttcaaagaaaacacaaaaaactatactctaaattttaatgtttta 2246026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 293 - 448
Target Start/End: Complemental strand, 37735550 - 37735395
Alignment:
Q  293 gtttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcct 392  Q
    |||||||| |||  ||||||||| |||||||||||||||||||| || || ||       |||||||||||| |||| |||||||||||||| || |||     
T  37735550 gtttattcacatgaaattaaatgcaaattacattcaattttctctcttttccattttctccataatcaatagccaataaaaattgtttttacttcttccc 37735451  T
Q  393 ataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgtttta 448  Q
    || |||||| || ||||||||| |||||||| ||||||||| ||||||||||||||    
T  37735450 atgaaacttattccaaagaaaatacaaaaaactatacttcagattcttatgtttta 37735395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 353 - 467
Target Start/End: Complemental strand, 44148943 - 44148829
Alignment:
Q  353 cataatcaatagtcaatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttt 452  Q
    ||||| |||| | |||||||||||||||||||||| ||| || |||||| || |||||||||||||||||| ||| || |||||||||||| ||||||||    
T  44148943 cataaccaattgccaatgaaaattgtttttacatcttcccatgaaacttattccaaagaaaacacaaaaaactatgctacaaattcttatgctttagttt 44148844  T
Q  453 tcttaataaatgtga 467  Q
    || |||||| |||||    
T  44148843 tcgtaataagtgtga 44148829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 392 - 466
Target Start/End: Original strand, 4672924 - 4672998
Alignment:
Q  392 tataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtg 466  Q
    ||||||||||||||||||||||| |||||||| |||||| ||||||||||| |||||||||||||||||| ||||    
T  4672924 tataaaacttttttcaaagaaaatacaaaaaactatactccaaattcttatattttagttttcttaataagtgtg 4672998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 353 - 459
Target Start/End: Original strand, 30221779 - 30221885
Alignment:
Q  353 cataatcaatagtcaatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttt 452  Q
    ||||| |||||  |||| |||| |||||||||||| ||| ||||||||| ||| |||||||||||||||||||||| | ||| ||||||||||||| |||    
T  30221779 cataaccaatatccaataaaaaatgtttttacatcttcccataaaacttattttaaagaaaacacaaaaaattatattccaagttcttatgttttaattt 30221878  T
Q  453 tcttaat 459  Q
    |||||||    
T  30221879 tcttaat 30221885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 353 - 467
Target Start/End: Complemental strand, 32742309 - 32742195
Alignment:
Q  353 cataatcaatagtcaatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttt 452  Q
    ||||||||||  | ||||||||||||||||| ||  |  |||||||||||||| ||||||||||||||||| ||||||  ||||||||||| ||||||||    
T  32742309 cataatcaatgattaatgaaaattgtttttatatttttttataaaactttttttaaagaaaacacaaaaaactatactcaaaattcttatgctttagttt 32742210  T
Q  453 tcttaataaatgtga 467  Q
    | ||||||| |||||    
T  32742209 ttttaataagtgtga 32742195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 359 - 467
Target Start/End: Original strand, 1034917 - 1035023
Alignment:
Q  359 caatagtcaatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaa 458  Q
    |||||||| |||||||||||||||| ||| ||  ||||||||| || |||||||||||||||| |  ||||  ||||||||||||||||| |||||||||    
T  1034917 caatagtcgatgaaaattgtttttatatcttctcataaaacttattccaaagaaaacacaaaaca--atacgccaaattcttatgttttaattttcttaa 1035014  T
Q  459 taaatgtga 467  Q
    |||||||||    
T  1035015 taaatgtga 1035023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 366 - 467
Target Start/End: Original strand, 50176589 - 50176690
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgt 465  Q
    |||| ||||||||||||||||| |||||||||| || ||||||||| ||||||||||| |||  | |||| |  ||||||||||||||||||||||||||    
T  50176589 caataaaaattgtttttacatcttcctataaaatttatttcaaagataacacaaaaaactatgttacaaactactatgttttagttttcttaataaatgt 50176688  T
Q  466 ga 467  Q
    ||    
T  50176689 ga 50176690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 296 - 420
Target Start/End: Complemental strand, 10558920 - 10558796
Alignment:
Q  296 tattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcctata 395  Q
    |||||||||  ||||||||| |||||||||| |||||| || ||||| ||       |||||||||||| |||||||||||||||||||||| ||| |||    
T  10558920 tattctcatgaaattaaatgtaaattacattaaattttttctctcttccattttctccataatcaatagccaatgaaaattgtttttacatcttcccata 10558821  T
Q  396 aaacttttttcaaagaaaacacaaa 420  Q
    ||| || || |||||||||||||||    
T  10558820 aaaattattccaaagaaaacacaaa 10558796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 293 - 442
Target Start/End: Original strand, 25391678 - 25391824
Alignment:
Q  293 gtttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcct 392  Q
    ||||||||||||| ||||||||| ||||||||||||||||| |  ||||| ||       |||||  | ||| |||||||||||||||||||||  || |    
T  25391678 gtttattctcataaaattaaatgcaaattacattcaatttt-tatctcttccacttctc-cataactattagccaatgaaaattgtttttacattttcat 25391775  T
Q  393 ataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttat 442  Q
    ||||||||| | | ||||||||||||||||||||||||||||||||||||    
T  25391776 ataaaacttatct-aaagaaaacacaaaaaattatacttcaaattcttat 25391824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 311 - 467
Target Start/End: Complemental strand, 7876091 - 7875933
Alignment:
Q  311 aaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcctataaaactttt--ttcaa 408  Q
    ||||| |||||||||||||||||||| |||||| |       ||||| ||||||||||| |||||| |||||||||| | ||||||||       |||||    
T  7876091 aaatgcaaattacattcaattttctctctcttttattttttccataaccaatagtcaataaaaattatttttacatctttctataaaaaaaaaaattcaa 7875992  T
Q  409 agaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    ||||||||||||||| |||| |||||||| |||| ||||| |||||||||||| |||||    
T  7875991 agaaaacacaaaaaactataattcaaatttttatattttaattttcttaataagtgtga 7875933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 366 - 467
Target Start/End: Complemental strand, 30701479 - 30701378
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgt 465  Q
    ||||||||||| |||| ||||| ||||||||||||| ||||||||| |||||||||||||||  | |||| |  |||||||||||||| ||||||| |||    
T  30701479 caatgaaaattattttcacatcttcctataaaacttatttcaaagataacacaaaaaattatgttacaaactactatgttttagtttttttaataagtgt 30701380  T
Q  466 ga 467  Q
    ||    
T  30701379 ga 30701378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 298 - 409
Target Start/End: Original strand, 16854139 - 16854250
Alignment:
Q  298 ttctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcctataaa 397  Q
    |||||||| ||||||||| |||||||||| |||||| || ||||||||       ||||| |||||| |||| ||||||||||||||| | ||| |||||    
T  16854139 ttctcataaaattaaatgcaaattacatttaattttatctctctttcattttctccataaccaatagccaataaaaattgtttttacaccttccaataaa 16854238  T
Q  398 acttttttcaaa 409  Q
    ||||||||||||    
T  16854239 acttttttcaaa 16854250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 366 - 467
Target Start/End: Original strand, 7397773 - 7397874
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgt 465  Q
    |||||||||||||||||||||| |||||||||| || ||||||||| ||||||||||| |||  | |||| |  ||| |||||||||| ||||||| |||    
T  7397773 caatgaaaattgtttttacatcttcctataaaatttatttcaaagataacacaaaaaactatgttacaaactactatattttagtttttttaataagtgt 7397872  T
Q  466 ga 467  Q
    ||    
T  7397873 ga 7397874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 366 - 467
Target Start/End: Original strand, 35884274 - 35884375
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgt 465  Q
    ||||||||||| |||||||||| | | |||||| || ||||||| | ||||||||||||||||| |||||||  || |  ||||||||||||||||||||    
T  35884274 caatgaaaattatttttacatctttccataaaatttatttcaaaaagaacacaaaaaattatacctcaaattactaagagttagttttcttaataaatgt 35884373  T
Q  466 ga 467  Q
    ||    
T  35884374 ga 35884375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 366 - 467
Target Start/End: Complemental strand, 45840159 - 45840059
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgt 465  Q
    ||||||||||||||||| |||| ||||||||||| | ||||||| | ||||||||||| |||  | |||| | ||||||||||||||||||||||| |||    
T  45840159 caatgaaaattgttttt-catcttcctataaaacatatttcaaaaataacacaaaaaactatgttacaaactattatgttttagttttcttaataagtgt 45840061  T
Q  466 ga 467  Q
    ||    
T  45840060 ga 45840059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 353 - 465
Target Start/End: Complemental strand, 47303012 - 47302903
Alignment:
Q  353 cataatcaatagtcaatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttt 452  Q
    |||||||||||| ||||||||||| |||| ||||| |||||| |||||| || | || |||||||||||  ||||||| ||| ||||||| |||||||||    
T  47303012 cataatcaatagccaatgaaaattatttt-acatcttcctatgaaacttattcctaaaaaaacacaaaa--ttatactccaatttcttatattttagttt 47302916  T
Q  453 tcttaataaatgt 465  Q
    |||||| ||||||    
T  47302915 tcttaacaaatgt 47302903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 318 - 467
Target Start/End: Original strand, 50369981 - 50370118
Alignment:
Q  318 aattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacac 417  Q
    ||||||||||||||||||| ||||||||       ||||| |||||| ||||  |||||||||||||||| ||||||||||||||||||||  ||||||     
T  50369981 aattacattcaattttctctctctttcatttttt-cataaccaatagccaatagaaattgtttttacatcttcctataaaacttttttcaa--aaaaca- 50370076  T
Q  418 aaaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
            ||||||||||||||||| ||||| |||| |||||||||||||    
T  50370077 --------atacttcaaattcttatattttaatttttttaataaatgtga 50370118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 365 - 467
Target Start/End: Original strand, 35941903 - 35942005
Alignment:
Q  365 tcaatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatg 464  Q
    |||||||||||| || ||||||| | | ||||||||| |||||| || | ||||||||||||||| ||||||  ||| || |||||||||||||||| ||    
T  35941903 tcaatgaaaattattattacatctttccataaaacttatttcaaggagagcacaaaaaattatacctcaaataattaagtgttagttttcttaataagtg 35942002  T
Q  465 tga 467  Q
    |||    
T  35942003 tga 35942005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 366 - 467
Target Start/End: Complemental strand, 43656134 - 43656033
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgt 465  Q
    ||||||||||| |||||||||| | | || |||||| |||||| || ||||||||||||||||| ||||||   || || |||||||||||||||| |||    
T  43656134 caatgaaaattatttttacatctttccatgaaacttatttcaaggagaacacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgt 43656035  T
Q  466 ga 467  Q
    ||    
T  43656034 ga 43656033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 366 - 467
Target Start/End: Complemental strand, 52841539 - 52841438
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgt 465  Q
    |||||||||||||||| ||||| | |||| |||||| ||| || || || |||| ||| |||||| |||| | || ||||||||||||||||||||||||    
T  52841539 caatgaaaattgttttaacatctttctatgaaacttattttaaggataagacaagaaactatactacaaactattgtgttttagttttcttaataaatgt 52841440  T
Q  466 ga 467  Q
    ||    
T  52841439 ga 52841438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 366 - 461
Target Start/End: Complemental strand, 25185398 - 25185302
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaat-tatacttcaaattcttatgttttagttttcttaataa 461  Q
    |||||||| ||||||| ||||| ||||||||||||| ||||||||| |||||||||||  |||  | |||| |  ||||||||||||||||||||||    
T  25185398 caatgaaagttgttttcacatcttcctataaaacttatttcaaagataacacaaaaaaactatgttacaaactactatgttttagttttcttaataa 25185302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 353 - 467
Target Start/End: Complemental strand, 32318667 - 32318553
Alignment:
Q  353 cataatcaatagtcaatgaaaattgtttttacatcatcctataaaactt-ttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagtt 451  Q
    ||||| |||||  |||||||||||||||||||||| ||| ||||||||| |||  ||| |||| | ||||||||||||| |||||| |||| ||||| ||    
T  32318667 cataaccaataaccaatgaaaattgtttttacatcttccaataaaacttatttaaaaacaaaaaagaaaaaattatactccaaatttttatattttaatt 32318568  T
Q  452 ttcttaataaatgtga 467  Q
    || ||||||| |||||    
T  32318567 tt-ttaataattgtga 32318553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 366 - 467
Target Start/End: Original strand, 5950506 - 5950610
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaatt---cttatgttttagttttcttaataaa 462  Q
    |||||||||||||||||||||| ||||||||||||| |||||| || ||||||| ||| |||  | |||| |     ||||||||||||||||||||||     
T  5950506 caatgaaaattgtttttacatcttcctataaaacttatttcaaggataacacaagaaactatgttgcaaactacgagtatgttttagttttcttaataag 5950605  T
Q  463 tgtga 467  Q
    |||||    
T  5950606 tgtga 5950610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 366 - 428
Target Start/End: Complemental strand, 8889791 - 8889729
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattata 428  Q
    |||||||||||||||||||||| ||||||||||||| |||||| || ||||||| ||| ||||    
T  8889791 caatgaaaattgtttttacatcttcctataaaacttatttcaaggataacacaataaactata 8889729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 353 - 463
Target Start/End: Complemental strand, 298776 - 298665
Alignment:
Q  353 cataatcaatagtcaatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattctt--atgttttagt 450  Q
    |||||||||||| |||| |||||  |||||||||| ||| ||||| ||| ||  ||||||||||||  ||| |||||||||| || ||  ||||||||||    
T  298776 cataatcaatagccaattaaaataatttttacatcttcccataaa-cttattctaaagaaaacacatcaaactatacttcaagttattttatgttttagt 298678  T
Q  451 tttcttaataaat 463  Q
    |||||||||||||    
T  298677 tttcttaataaat 298665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 354 - 419
Target Start/End: Complemental strand, 5858477 - 5858412
Alignment:
Q  354 ataatcaatagtcaatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaa 419  Q
    |||| |||||| |||||||||||||||||| ||| ||||||||||||| |||||| || |||||||    
T  5858477 ataaccaatagccaatgaaaattgtttttatatcttcctataaaacttatttcaaggataacacaa 5858412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 366 - 467
Target Start/End: Original strand, 15285866 - 15285967
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgt 465  Q
    |||||| |||| |||||||||  | | || |||||| |||||| || ||||||||||||||||||||||||   || || |||||||||||||||| |||    
T  15285866 caatgagaattatttttacatatttccatgaaacttatttcaaggagaacacaaaaaattatacttcaaatcactaagtgttagttttcttaataagtgt 15285965  T
Q  466 ga 467  Q
    ||    
T  15285966 ga 15285967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 355 - 408
Target Start/End: Original strand, 15912254 - 15912307
Alignment:
Q  355 taatcaatagtcaatgaaaattgtttttacatcatcctataaaacttttttcaa 408  Q
    ||||||| | ||||||||||||||||||||||| ||||||||||||| ||||||    
T  15912254 taatcaacaatcaatgaaaattgtttttacatcttcctataaaacttatttcaa 15912307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 366 - 423
Target Start/End: Original strand, 16688203 - 16688260
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaa 423  Q
    |||||||||||||||||||||| ||||||||||||| ||||||| | |||| ||||||    
T  16688203 caatgaaaattgtttttacatcttcctataaaacttatttcaaaaataacataaaaaa 16688260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 293 - 415
Target Start/End: Complemental strand, 23392332 - 23392211
Alignment:
Q  293 gtttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcct 392  Q
    ||||||||||||  ||||||||| |||||||||| |||||||||  |||| ||       ||||| |||||||||||||||||| |||||| ||  | ||    
T  23392332 gtttattctcatgaaattaaatgcaaattacatt-aattttctctttcttccattttctccataaccaatagtcaatgaaaattatttttatatttttct 23392234  T
Q  393 ataaaacttttttcaaagaaaac 415  Q
    ||||||||| || ||||||||||    
T  23392233 ataaaacttattccaaagaaaac 23392211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 366 - 467
Target Start/End: Complemental strand, 23873924 - 23873823
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgt 465  Q
    ||||||||||| |||||||||| | | || |||||| || ||| || ||||||||||||||||| ||||||   || || |||||||||||||||| |||    
T  23873924 caatgaaaattatttttacatctttccatgaaacttattccaaggagaacacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgt 23873825  T
Q  466 ga 467  Q
    ||    
T  23873824 ga 23873823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 366 - 467
Target Start/End: Original strand, 25990811 - 25990912
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgt 465  Q
    ||||||||||| |||||||||  | | || |||||| || ||| || ||||||||||||||||| ||||||   || || ||||||||||||||||||||    
T  25990811 caatgaaaattatttttacatatttccatgaaacttattccaaggagaacacaaaaaattatacctcaaatcactaagtgttagttttcttaataaatgt 25990910  T
Q  466 ga 467  Q
    ||    
T  25990911 ga 25990912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 366 - 467
Target Start/End: Original strand, 37538876 - 37538977
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgt 465  Q
    ||||||||||||| |||||||| ||||||||||||| |||||| || ||||||| ||| |||  | |||| |  ||| ||||| |||||||||||| |||    
T  37538876 caatgaaaattgtctttacatcttcctataaaacttatttcaaggataacacaagaaactatgttgcaaactactatattttaattttcttaataagtgt 37538975  T
Q  466 ga 467  Q
    ||    
T  37538976 ga 37538977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 366 - 467
Target Start/End: Complemental strand, 38942538 - 38942437
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgt 465  Q
    ||||||||||| |||||||||| | | || |||||| || ||| || ||||||||||||||||| ||||||   || || |||||||||||||||| |||    
T  38942538 caatgaaaattatttttacatctttccatgaaacttattccaaggagaacacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgt 38942439  T
Q  466 ga 467  Q
    ||    
T  38942438 ga 38942437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 366 - 423
Target Start/End: Original strand, 43765361 - 43765418
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaa 423  Q
    ||||||||| |||||||||||| ||||||||||||| ||  |||||||||||||||||    
T  43765361 caatgaaaaatgtttttacatcttcctataaaacttattctaaagaaaacacaaaaaa 43765418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 354 - 423
Target Start/End: Complemental strand, 44510325 - 44510256
Alignment:
Q  354 ataatcaatagtcaatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaa 423  Q
    |||||||||  ||||||||||||||||||||| | |||||||||| || ||||||| | |||||||||||    
T  44510325 ataatcaattatcaatgaaaattgtttttacaacttcctataaaatttatttcaaaaataacacaaaaaa 44510256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 366 - 467
Target Start/End: Original strand, 46949384 - 46949485
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgt 465  Q
    ||||||||||| |||||||||| | | || |||||| || ||| || ||||||||||||||||  ||||||   || || ||||||||||||||||||||    
T  46949384 caatgaaaattatttttacatctttccatgaaacttattccaaggagaacacaaaaaattatatctcaaatcactaagtgttagttttcttaataaatgt 46949483  T
Q  466 ga 467  Q
    ||    
T  46949484 ga 46949485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 366 - 467
Target Start/End: Complemental strand, 51338991 - 51338891
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgt 465  Q
    |||||||||||| ||||||||| | |||| |||||| ||||||||| ||||||| || | ||||| ||||||   || |||||| |||||||||||||||    
T  51338991 caatgaaaattgattttacatctttctatgaaacttatttcaaagacaacacaagaagtcatactacaaattacaatattttag-tttcttaataaatgt 51338893  T
Q  466 ga 467  Q
    ||    
T  51338892 ga 51338891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 366 - 405
Target Start/End: Original strand, 13351747 - 13351786
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaactttttt 405  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  13351747 caatgaaaattgtttttacatcttcctataaaactttttt 13351786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 389 - 460
Target Start/End: Original strand, 13352184 - 13352255
Alignment:
Q  389 tcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaata 460  Q
    ||||||||||||| ||||||||| |||||||||||||||    |||| |  |||||||||||||||||||||    
T  13352184 tcctataaaacttatttcaaagataacacaaaaaattatgtaacaaactactatgttttagttttcttaata 13352255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 366 - 461
Target Start/End: Complemental strand, 35366297 - 35366202
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataa 461  Q
    |||| ||||||||||||||||| | |||||||| || |||||| || ||||||| ||| |||  | |||| |  ||||||||||||||||||||||    
T  35366297 caattaaaattgtttttacatctttctataaaatttatttcaacgataacacaagaaactatgttgcaaactactatgttttagttttcttaataa 35366202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 373 - 467
Target Start/End: Complemental strand, 26907181 - 26907087
Alignment:
Q  373 aattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    |||| |||||||||| | | || |||||| || ||| || ||||||||||||||||| ||||||  ||| || |||||||||||||||| |||||    
T  26907181 aattatttttacatctttccatgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtattagttttcttaataagtgtga 26907087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 294 - 400
Target Start/End: Complemental strand, 6787155 - 6787050
Alignment:
Q  294 tttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatccta 393  Q
    ||||||||| || || |||||| ||| |||||||||||| ||| ||||||||       ||||| |||||| |||| |||||| |||||||||| |||||    
T  6787155 tttattctcgtaaaaataaatgcaaactacattcaattt-ctctctctttcattttttccataaccaatagccaataaaaattatttttacatcttccta 6787057  T
Q  394 taaaact 400  Q
    |||||||    
T  6787056 taaaact 6787050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 366 - 423
Target Start/End: Original strand, 16661583 - 16661639
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaa 423  Q
    |||| ||||||||||||||||| |||||| |||||| ||||||||| |||||||||||    
T  16661583 caataaaaattgtttttacatcctcctat-aaacttatttcaaagataacacaaaaaa 16661639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 366 - 467
Target Start/End: Complemental strand, 28916612 - 28916511
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgt 465  Q
    ||||||||||| |||||||||| | | || |||||| || |||  | ||||||||||||||||| ||||||   || || |||||||||||||||| |||    
T  28916612 caatgaaaattatttttacatctttccatgaaacttattccaagaagaacacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgt 28916513  T
Q  466 ga 467  Q
    ||    
T  28916512 ga 28916511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 366 - 467
Target Start/End: Complemental strand, 40935710 - 40935609
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgt 465  Q
    |||||| |||| |||||||||| | | || |||||| || ||| || |||||||||||| |||| ||||||   || || ||||||||||||||||||||    
T  40935710 caatgagaattatttttacatctttccatgaaacttattccaaggagaacacaaaaaatcatacctcaaatcactaagtgttagttttcttaataaatgt 40935611  T
Q  466 ga 467  Q
    ||    
T  40935610 ga 40935609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 366 - 467
Target Start/End: Original strand, 49924482 - 49924583
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgt 465  Q
    |||||| |||| |||||||||| | | || |||||| ||||||  | ||||||||||||||||| ||||||   || || |||||||||||||||| |||    
T  49924482 caatgagaattatttttacatctttccatgaaacttatttcaagaagaacacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgt 49924581  T
Q  466 ga 467  Q
    ||    
T  49924582 ga 49924583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 293 - 333
Target Start/End: Original strand, 11241037 - 11241077
Alignment:
Q  293 gtttattctcatagaattaaatgaaaattacattcaatttt 333  Q
    ||||||||||||| ||||||||| |||||||||||||||||    
T  11241037 gtttattctcataaaattaaatgtaaattacattcaatttt 11241077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 366 - 436
Target Start/End: Original strand, 18852286 - 18852356
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaat 436  Q
    |||||| |||| |||||||||| | | || |||||| |||||| || ||||||||||||||||| ||||||    
T  18852286 caatgagaattatttttacatctttccatgaaacttatttcaaggagaacacaaaaaattatacctcaaat 18852356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 366 - 467
Target Start/End: Original strand, 35189264 - 35189366
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttag-ttttcttaataaatg 464  Q
    ||||||||||| |||||||||  | | || |||||| ||||||  | |||| |||||||||||| |||||||  || || |||| |||||||||||||||    
T  35189264 caatgaaaattatttttacatatttccatgaaacttatttcaagaagaacataaaaaattatacctcaaattactaagtgttagtttttcttaataaatg 35189363  T
Q  465 tga 467  Q
    |||    
T  35189364 tga 35189366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 353 - 467
Target Start/End: Original strand, 36383978 - 36384092
Alignment:
Q  353 cataatcaatagtcaatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttt 452  Q
    |||||| | ||| |||||| ||||||||||| ||| | | || ||| || || |||| | ||||||||||||||||  ||||||| | ||||||||  ||    
T  36383978 cataataattagccaatgataattgtttttatatctttccatgaaatttattccaaaaataacacaaaaaattatatctcaaattataatgttttaactt 36384077  T
Q  453 tcttaataaatgtga 467  Q
    ||||||||| |||||    
T  36384078 tcttaataagtgtga 36384092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 373 - 467
Target Start/End: Complemental strand, 39026336 - 39026242
Alignment:
Q  373 aattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    |||| |||||||||| | | || |||||| ||||||  | ||||||||||||||||| ||||||    | || ||||||||||||||||||||||    
T  39026336 aattatttttacatctttccatgaaacttatttcaagaagaacacaaaaaattatacatcaaatcaccaagtgttagttttcttaataaatgtga 39026242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 371 - 461
Target Start/End: Complemental strand, 46803760 - 46803670
Alignment:
Q  371 aaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataa 461  Q
    ||||||||||||||||| | |||| |||||| || ||| || ||||||||||| |||  | |||| |  |||||||| |||||||||||||    
T  46803760 aaaattgtttttacatctttctatgaaacttattgcaaggataacacaaaaaactatgttgcaaactactatgttttggttttcttaataa 46803670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 293 - 335
Target Start/End: Original strand, 50012585 - 50012627
Alignment:
Q  293 gtttattctcatagaattaaatgaaaattacattcaattttct 335  Q
    ||||||||| ||| ||||||||| |||||||||||||||||||    
T  50012585 gtttattcttataaaattaaatgcaaattacattcaattttct 50012627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 366 - 467
Target Start/End: Complemental strand, 40960571 - 40960470
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgt 465  Q
    |||||| |||| |||||||||| | | || |||||| || ||| || |||||||||||| || | ||||||   || || ||||||||||||||||||||    
T  40960571 caatgagaattatttttacatctttccatgaaacttattccaaggagaacacaaaaaatcatgcctcaaatcactaagtgttagttttcttaataaatgt 40960472  T
Q  466 ga 467  Q
    ||    
T  40960471 ga 40960470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 413 - 461
Target Start/End: Original strand, 18036654 - 18036702
Alignment:
Q  413 aacacaaaaaattatacttcaaattcttatgttttagttttcttaataa 461  Q
    ||||||||||||||||| ||||||  ||| || ||||||||||||||||    
T  18036654 aacacaaaaaattatacctcaaatcattaagtgttagttttcttaataa 18036702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 119; Significance: 1e-60; HSPs: 60)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 227 - 467
Target Start/End: Complemental strand, 11262117 - 11261877
Alignment:
Q  227 cacattttctttgtcccaaaatataagnnnnnnngacaaacttttatctttttcaatannnnnnnngtttattctcatagaattaaatgaaaattacatt 326  Q
    |||||||||||||||||||||||||||       |||||||||||||||||| ||| |        ||||||||||||| ||||||||| ||||||||||    
T  11262117 cacattttctttgtcccaaaatataagtaaaaaagacaaacttttatcttttccaagattttttttgtttattctcataaaattaaatgcaaattacatt 11262018  T
Q  327 caattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaatta 426  Q
    ||||||||||  |||||||       ||||| |||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  11262017 caattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaacttttttcaaagaaaacacaaaaaatta 11261918  T
Q  427 tacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    |||| |||||||| |||| ||||||| |||||||| |||||    
T  11261917 tactccaaattctcatgtgttagtttacttaataagtgtga 11261877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 293 - 467
Target Start/End: Original strand, 20644008 - 20644182
Alignment:
Q  293 gtttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcct 392  Q
    ||||||||||||  ||||||||| |||||||||||||||||| | ||||||||       ||||| |||||| |||||||||||||||||||||| ||||    
T  20644008 gtttattctcatgaaattaaatgcaaattacattcaattttccctctctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcct 20644107  T
Q  393 ataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||    
T  20644108 ataaaactttttccaaagaaaacacaaaaaattatactccaaattcttatgttttagttttcttaataagtgtga 20644182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 295 - 467
Target Start/End: Original strand, 6686380 - 6686553
Alignment:
Q  295 ttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcctat 394  Q
    ||||||||||| ||||||||| ||||||||||||||||||||  |||||||       ||||| |||||| |||||||||||||||||||||| ||||||    
T  6686380 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctat 6686479  T
Q  395 aaaacttttttc-aaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    |||||||||||| ||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  6686480 aaaacttttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataaatgtga 6686553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 293 - 466
Target Start/End: Original strand, 34425325 - 34425497
Alignment:
Q  293 gtttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcct 392  Q
    ||||||||||||| ||||||||| |||||| ||||||||||||| |||||| |       |||||||||||| |||||||||||||||||||||  ||||    
T  34425325 gtttattctcataaaattaaatgcaaattatattcaattttctctctcttttatttttc-cataatcaatagccaatgaaaattgtttttacatattcct 34425423  T
Q  393 ataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtg 466  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  34425424 ataaaacttttttcaaagaaaacacaaaaaactatacttcaaattcttatgttttagttttcttaataagtgtg 34425497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 227 - 467
Target Start/End: Complemental strand, 43590195 - 43589955
Alignment:
Q  227 cacattttctttgtcccaaaatataagnnnnnnngacaaacttttatctttttcaatannnnnnnngtttattctcatagaattaaatgaaaattacatt 326  Q
    |||||||||||||| ||||||||||||        ||||||||||||||||||||| |          ||||||||||| ||||||||| ||||||||||    
T  43590195 cacattttctttgtaccaaaatataagcaaaaaatacaaacttttatctttttcaagatttttttttgttattctcataaaattaaatgcaaattacatt 43590096  T
Q  327 caattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaatta 426  Q
    ||||||||||  |||||||       ||||| |||||| ||||||||||||||||||||||  |||||||||||||||  ||||||||||||||||| ||    
T  43590095 caattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatctccctataaaactttttcaaaagaaaacacaaaaaacta 43589996  T
Q  427 tacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    |||| |||||||||||||||||||||||||||||| |||||    
T  43589995 tactccaaattcttatgttttagttttcttaataagtgtga 43589955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 227 - 467
Target Start/End: Complemental strand, 37562995 - 37562754
Alignment:
Q  227 cacattttctttgtcccaaaatataagnnnnnnngacaaacttttatctttttcaatannnnnnnngtttattctcatagaattaaatgaaaattacatt 326  Q
    ||||||||||| |||||||||||||||       |||||||||||||||||| ||  |        ||||||||||||| ||||||||| ||||||||||    
T  37562995 cacattttcttcgtcccaaaatataagcaaaaaagacaaacttttatcttttccatgattttttttgtttattctcataaaattaaatgcaaattacatt 37562896  T
Q  327 caattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaa-cacaaaaaatt 425  Q
    ||||||||||  |||||||       ||||| ||||||  ||||||||||||||||||||| |||||||||||||||| |||| |||| ||||||||| |    
T  37562895 caattttctctgtctttcattttttccataaacaatagctaatgaaaattgtttttacatcttcctataaaactttttccaaaaaaaaacacaaaaaact 37562796  T
Q  426 atacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    ||||| |||||||||||||||||||||||||||||| |||||    
T  37562795 atactccaaattcttatgttttagttttcttaataagtgtga 37562754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 293 - 467
Target Start/End: Original strand, 42273643 - 42273815
Alignment:
Q  293 gtttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcct 392  Q
    ||||||||||||| ||||||||| ||||| ||||||||||||||  |||||||       ||||| |||||| |||||||||||||||||||||| || |    
T  42273643 gtttattctcataaaattaaatgcaaattgcattcaattttctc--tctttcattttctccataaccaatagccaatgaaaattgtttttacatcttctt 42273740  T
Q  393 ataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    |||||||||||| |||||||||||||||||| |||||| |||||||||||||||||||||||||||||| |||||    
T  42273741 ataaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgtga 42273815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 297 - 467
Target Start/End: Original strand, 20039100 - 20039270
Alignment:
Q  297 attctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcctataa 396  Q
    ||||||||| ||||||||| |||||||||| ||||||||  ||||||||       ||||| |||||| |||| ||||||| ||||||||| ||||||||    
T  20039100 attctcataaaattaaatgcaaattacatttaattttctatctctttcatttttttcataaccaatagccaataaaaattggttttacatcttcctataa 20039199  T
Q  397 aacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    ||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||    
T  20039200 aacctttttcaaagaaaacacaaaaaattatactccaaattcttatgttttagttttcttaataagtgtga 20039270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 227 - 457
Target Start/End: Complemental strand, 37522823 - 37522592
Alignment:
Q  227 cacattttctttgtcccaaaatataagnnnnnnngacaaacttttatctttttcaatannnnnnnngtttattctcatagaa-ttaaatgaaaattacat 325  Q
    ||||||||||| |||||||||||||||       |||||||||||||||||| ||  |        || |||||||||| || ||||||| |||||||||    
T  37522823 cacattttcttcgtcccaaaatataagcaaaaaagacaaacttttatcttttccatgattttttttgtctattctcataaaaattaaatgcaaattacat 37522724  T
Q  326 tcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaatt 425  Q
    |||||||||||  |||||||       ||||| |||||| |||||||||||||||||||||| |||||||||||||||| |||| ||||||||||||| |    
T  37522723 tcaattttctctgtctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactttttccaaaaaaaacacaaaaaact 37522624  T
Q  426 atacttcaaattcttatgttttagttttctta 457  Q
    ||||| ||||||||||||||||||||||||||    
T  37522623 atactccaaattcttatgttttagttttctta 37522592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 293 - 441
Target Start/End: Original strand, 32110996 - 32111144
Alignment:
Q  293 gtttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcct 392  Q
    ||||||||||||| ||||||||| |||||||||| ||||||||| ||||||||       ||||| ||||||||||||||||||||||||||||| ||||    
T  32110996 gtttattctcataaaattaaatgcaaattacatttaattttctctctctttcatattttccataaccaatagtcaatgaaaattgtttttacatcttcct 32111095  T
Q  393 ataaaacttttttcaaagaaaacacaaaaaattatacttcaaattctta 441  Q
    || |||||||||||||||||||||||||| |||||||| ||||||||||    
T  32111096 atgaaacttttttcaaagaaaacacaaaacattatactccaaattctta 32111144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 293 - 461
Target Start/End: Complemental strand, 43454490 - 43454322
Alignment:
Q  293 gtttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcct 392  Q
    ||||| ||||||||||||||||| |||||||||||||||||||| |||||| |       | ||| ||||||| ||||||||||||||||||||  ||||    
T  43454490 gtttaatctcatagaattaaatgtaaattacattcaattttctctctcttttattttcttcttaaccaatagtaaatgaaaattgtttttacatattcct 43454391  T
Q  393 ataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataa 461  Q
    ||||||||| |  |||||||||||||||||| |||| ||||| ||||||||||||| ||||||||||||    
T  43454390 ataaaacttatgacaaagaaaacacaaaaaactatatttcaagttcttatgttttaattttcttaataa 43454322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 293 - 460
Target Start/End: Complemental strand, 38130283 - 38130113
Alignment:
Q  293 gtttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcct 392  Q
    ||||||||||||| ||||||||| | |||||||||||||||||| ||||||||       ||||| |||||| ||||||||||| |||||||||  ||||    
T  38130283 gtttattctcataaaattaaatgtagattacattcaattttctctctctttcattttttccataaccaatagccaatgaaaattatttttacatattcct 38130184  T
Q  393 ataaaacttttttcaaagaaaacacaaaaa---attatacttcaaattcttatgttttagttttcttaata 460  Q
    ||||||||||||  ||||||||||||||||   | |||| | |||||||||||||||||||||||||||||    
T  38130183 ataaaactttttctaaagaaaacacaaaaaactactatattccaaattcttatgttttagttttcttaata 38130113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 295 - 467
Target Start/End: Original strand, 25840860 - 25841032
Alignment:
Q  295 ttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcctat 394  Q
    ||||||||||  ||||||||| |||||||||| ||||||||| |||||| |       ||||| |||| |||||||||||||||||||||||| ||| ||    
T  25840860 ttattctcatgaaattaaatgcaaattacatttaattttctctctcttttattttttccataaacaattgtcaatgaaaattgtttttacatcttcccat 25840959  T
Q  395 aaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
     |||||| || |||||||||||||||||| ||| || |||||| ||||| ||||||||||||||||| |||||    
T  25840960 gaaacttattccaaagaaaacacaaaaaactatgctacaaatttttatgctttagttttcttaataagtgtga 25841032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 296 - 463
Target Start/End: Original strand, 19413138 - 19413305
Alignment:
Q  296 tattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcctata 395  Q
    |||||||||  ||||||||| |||||||||| ||||||| | |||||| |       ||||| |||| | |||||||||||||||||||||| ||| |||    
T  19413138 tattctcatgaaattaaatgcaaattacatttaattttccctctcttttattttttccataaccaattgccaatgaaaattgtttttacatcttcccata 19413237  T
Q  396 aaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaat 463  Q
    |||||| ||||||||||||||||||||| ||| || |||||||||||  |||||||||||||||||||    
T  19413238 aaacttatttcaaagaaaacacaaaaaactatgctacaaattcttatactttagttttcttaataaat 19413305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 293 - 421
Target Start/End: Original strand, 38280841 - 38280969
Alignment:
Q  293 gtttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcct 392  Q
    ||||||||||||| ||||||||| |||||| ||||||||||||| ||||||||       |||||||||||  |||||||||||||||||||||  ||||    
T  38280841 gtttattctcataaaattaaatgcaaattatattcaattttctctctctttcattttttccataatcaataaccaatgaaaattgtttttacattttcct 38280940  T
Q  393 ataaaacttttttcaaagaaaacacaaaa 421  Q
    ||||||||||||||||||||| |||||||    
T  38280941 ataaaacttttttcaaagaaagcacaaaa 38280969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 295 - 467
Target Start/End: Original strand, 17351384 - 17351556
Alignment:
Q  295 ttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcctat 394  Q
    ||||||||||  |||||||||||||||||||||||||||||| || | |||       |||||||||||| |||| ||||||||||||||||| | | ||    
T  17351384 ttattctcatgaaattaaatgaaaattacattcaattttctctctatgtcattttctccataatcaatagccaattaaaattgtttttacatctttccat 17351483  T
Q  395 aaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    ||||||| || ||| ||||| | |||||| |||||| ||| || ||| || ||||||||||||||||||||||    
T  17351484 aaaacttattccaacgaaaataaaaaaaactatactccaagtttttacgtattagttttcttaataaatgtga 17351556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 353 - 467
Target Start/End: Original strand, 23233465 - 23233579
Alignment:
Q  353 cataatcaatagtcaatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttt 452  Q
    ||||| ||||||| ||| |||| |||||||||||  |||||||||  | |||||||||||||||||||||| ||||| ||||||||||||||||||| ||    
T  23233465 cataaccaatagttaataaaaactgtttttacatattcctataaagttgttttcaaagaaaacacaaaaaactatacgtcaaattcttatgttttagatt 23233564  T
Q  453 tcttaataaatgtga 467  Q
    ||| ||||| |||||    
T  23233565 tctcaataagtgtga 23233579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 353 - 455
Target Start/End: Complemental strand, 41625618 - 41625517
Alignment:
Q  353 cataatcaatagtcaatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttt 452  Q
    ||||||||||||  |||||||||  |||||||||| |||||| |||||| ||||||||||||||||||||| |||| || ||||||||||||||||||||    
T  41625618 cataatcaatagcgaatgaaaataatttttacatcttcctatgaaacttatttcaaagaaaacacaaaaaactata-tttaaattcttatgttttagttt 41625520  T
Q  453 tct 455  Q
    |||    
T  41625519 tct 41625517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 366 - 461
Target Start/End: Complemental strand, 12912388 - 12912294
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataa 461  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||| ||||||||||| |||| ||| || |  ||||||||||||||||||||||    
T  12912388 caatgaaaattgtttttacatcttcctataaaacttatttcaaagataacacaaaaaactata-ttccaactactatgttttagttttcttaataa 12912294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 293 - 445
Target Start/End: Original strand, 8225457 - 8225608
Alignment:
Q  293 gtttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgttttt-acatcatcc 391  Q
    ||||||||||||| ||||||||| ||||||| ||||||||||||  |||||||       ||||| |||||| |||||||| || ||||| ||||  |||    
T  8225457 gtttattctcataaaattaaatgcaaattacgttcaattttctc--tctttcattttttccataaccaatagccaatgaaattttttttttacattttcc 8225554  T
Q  392 tataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgtt 445  Q
    ||||||||||||| ||||||||| |||||||| |||| | ||||||||| ||||    
T  8225555 tataaaactttttccaaagaaaatacaaaaaactatagtccaaattcttttgtt 8225608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 307 - 448
Target Start/End: Complemental strand, 42104401 - 42104262
Alignment:
Q  307 aattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcctataaaacttttttc 406  Q
    ||||||||| ||| ||||||||||||| || ||||| ||       |||||| ||||| |||||||||||||||||||||| ||| || |||||| || |    
T  42104401 aattaaatgcaaaatacattcaattttatcactcttccattttctccataattaatagccaatgaaaattgtttttacatcttcccatgaaacttgttcc 42104302  T
Q  407 aaagaaaacacaaaaaattatacttcaaattcttatgtttta 448  Q
    ||||| |||||  ||||||||||| |||||||||||||||||    
T  42104301 aaagagaacac--aaaattatactccaaattcttatgtttta 42104262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 354 - 442
Target Start/End: Complemental strand, 5984214 - 5984126
Alignment:
Q  354 ataatcaatagtcaatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttat 442  Q
    |||| ||||||||||||||||||||||||||||  | ||||||||||| || |||||||||||||||||| ||||||  ||||||||||    
T  5984214 ataaccaatagtcaatgaaaattgtttttacatatttctataaaacttattccaaagaaaacacaaaaaactatactctaaattcttat 5984126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 293 - 404
Target Start/End: Original strand, 32017698 - 32017808
Alignment:
Q  293 gtttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcct 392  Q
    ||||||||||||| ||||||||| ||||||||||||| |||||| |||||||        ||||| |||||| |||||||||||||||||||||| ||||    
T  32017698 gtttattctcataaaattaaatgcaaattacattcaactttctctctctttc-gtttttccataaccaatagacaatgaaaattgtttttacatcttcct 32017796  T
Q  393 ataaaacttttt 404  Q
    ||||||| ||||    
T  32017797 ataaaacgtttt 32017808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 307 - 467
Target Start/End: Original strand, 4463368 - 4463526
Alignment:
Q  307 aattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcctataaaacttttttc 406  Q
    |||||| || |||||||||| ||||||||| ||||||||       ||||| |||||| || ||||||||||||||||||| ||| || || ||| || |    
T  4463368 aattaattgcaaattacatttaattttctctctctttcattttttccataaccaatagccagtgaaaattgtttttacatcttcccatgaagcttattcc 4463467  T
Q  407 aaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    |||||||||||  | ||  || || |||||||||||| ||||||||||||||||| |||||    
T  4463468 aaagaaaacac--acaaccatgctacaaattcttatgctttagttttcttaataagtgtga 4463526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 295 - 467
Target Start/End: Complemental strand, 39505397 - 39505225
Alignment:
Q  295 ttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcctat 394  Q
    ||||||||||  ||||||||| |||||||||| ||||||||| |||||| |       |||||  ||| | |||||||||||||||||||||| | | ||    
T  39505397 ttattctcatgaaattaaatgcaaattacatttaattttctctctcttttatttttc-cataacgaattgccaatgaaaattgtttttacatcttaccat 39505299  T
Q  395 aaaacttttttcaaagaaaacacaa-aaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    ||||||| || |||||||||||||| |||| ||| || |||||||||||  |||| |||| ||||||| |||||    
T  39505298 aaaacttattccaaagaaaacacaaaaaaactatgctacaaattcttatactttaatttttttaataagtgtga 39505225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 365 - 423
Target Start/End: Original strand, 8959706 - 8959764
Alignment:
Q  365 tcaatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaa 423  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||| |||||||||||    
T  8959706 tcaatgaaaattgtttttacatcttcctataaaacttatttcaaagataacacaaaaaa 8959764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 366 - 453
Target Start/End: Complemental strand, 16153439 - 16153353
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagtttt 453  Q
    |||||||||| ||||||||||| ||||||||||||| ||||||||| ||||||||||| |||  | |||| | |||||||||||||||    
T  16153439 caatgaaaat-gtttttacatcttcctataaaacttatttcaaagataacacaaaaaactatgttacaaactattatgttttagtttt 16153353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 388 - 458
Target Start/End: Original strand, 32019910 - 32019980
Alignment:
Q  388 atcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaa 458  Q
    ||||||||| || ||||  |||||||||||| |||| |||||| |||||||||||||||||||||||||||    
T  32019910 atcctataagacgttttctaaagaaaacacagaaaactatactccaaattcttatgttttagttttcttaa 32019980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 367 - 467
Target Start/End: Complemental strand, 5736333 - 5736233
Alignment:
Q  367 aatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtg 466  Q
    ||||||||||||||||||| | |||||||||| || ||||||||| |||| |||||| |||  | |||| |  ||||||||| |||||||||||| ||||    
T  5736333 aatgaaaattgtttttacaacttcctataaaatttatttcaaagataacataaaaaactatgttacaaactactatgttttaattttcttaataagtgtg 5736234  T
Q  467 a 467  Q
    |    
T  5736233 a 5736233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 407 - 467
Target Start/End: Complemental strand, 12792839 - 12792779
Alignment:
Q  407 aaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    ||||||||||||||||| |||||| ||| |||||||||||||||||| ||||||| |||||    
T  12792839 aaagaaaacacaaaaaactatactccaatttcttatgttttagtttttttaataagtgtga 12792779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 366 - 461
Target Start/End: Original strand, 8506498 - 8506593
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataa 461  Q
    |||||||||||||||||||||| | ||||||||||| |||||| || |||| || ||| |||  | |||| |  ||||||||||||||||||||||    
T  8506498 caatgaaaattgtttttacatctttctataaaacttatttcaaggataacataagaaactatgttgcaaactactatgttttagttttcttaataa 8506593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 293 - 467
Target Start/End: Complemental strand, 9957583 - 9957428
Alignment:
Q  293 gtttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcct 392  Q
    ||||||||||||| ||||||||| ||||||||||||| ||||||  |||||||       ||||| |||||| |||||||||||||||||||||| |||     
T  9957583 gtttattctcataaaattaaatgcaaattacattcaactttctc--tctttcatttttt-cataaccaatagccaatgaaaattgtttttacatcttcc- 9957488  T
Q  393 ataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
                  |||||||||||||||| | ||||| |||||||| ||||||||||||||||||||| |||||    
T  9957487 --------------aaagaaaacacaaaaact-atactccaaattctcatgttttagttttcttaataagtgtga 9957428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 354 - 461
Target Start/End: Original strand, 30703656 - 30703763
Alignment:
Q  354 ataatcaatagtcaatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagtttt 453  Q
    ||||||||||  |||||||| || ||| |||||| |||||||||| || ||||||||| |||||||||||||||  |  ||| |  ||||||||||||||    
T  30703656 ataatcaataaccaatgaaacttttttatacatcttcctataaaatttatttcaaagataacacaaaaaattatgttgtaaactactatgttttagtttt 30703755  T
Q  454 cttaataa 461  Q
     |||||||    
T  30703756 gttaataa 30703763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 355 - 461
Target Start/End: Original strand, 32079560 - 32079666
Alignment:
Q  355 taatcaatagtcaatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttc 454  Q
    |||| |||| || |||||||||||||||||||| | | || |||||  |||||| || |||| |||||| |||| | |||||| | ||||||||||||||    
T  32079560 taataaataatcgatgaaaattgtttttacatctttccattaaactaatttcaaggagaacataaaaaactataatccaaattataatgttttagttttc 32079659  T
Q  455 ttaataa 461  Q
    |||||||    
T  32079660 ttaataa 32079666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 366 - 463
Target Start/End: Complemental strand, 3463909 - 3463814
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaat 463  Q
    |||| ||||||||||||| ||| ||||||||||||| ||||||||| ||||| ||||| |||  | |||| |  ||||||||||||||||||||||||    
T  3463909 caataaaaattgtttttatatcttcctataaaacttatttcaaagataacac-aaaaactatgttacaaact-gtatgttttagttttcttaataaat 3463814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 366 - 423
Target Start/End: Complemental strand, 5369125 - 5369068
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaa 423  Q
    |||||||||||||||||||||| ||||||||||||| ||| ||| | |||||||||||    
T  5369125 caatgaaaattgtttttacatcttcctataaaacttattttaaaaataacacaaaaaa 5369068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 366 - 458
Target Start/End: Complemental strand, 1144585 - 1144493
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaa 458  Q
    |||||||||||||||||||||  |||||||||| || ||| ||||| ||||||||||| |||  | |||| |  |||| ||||||||||||||    
T  1144585 caatgaaaattgtttttacatattcctataaaatttattttaaagataacacaaaaaactatgttacaaactactatggtttagttttcttaa 1144493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 407 - 467
Target Start/End: Complemental strand, 12729937 - 12729878
Alignment:
Q  407 aaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    ||||||||||||||||| |||||| ||| |||||||||||||||||| ||||||| |||||    
T  12729937 aaagaaaacacaaaaaactatactccaatttcttatgttttagtttt-ttaataagtgtga 12729878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 293 - 341
Target Start/End: Complemental strand, 12730147 - 12730099
Alignment:
Q  293 gtttattctcatagaattaaatgaaaattacattcaattttctccctct 341  Q
    ||||||||||||| ||||||||| |||||||||||||||||||| ||||    
T  12730147 gtttattctcataaaattaaatgcaaattacattcaattttctctctct 12730099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 367 - 414
Target Start/End: Complemental strand, 104307 - 104260
Alignment:
Q  367 aatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaa 414  Q
    ||||||||||||||||||||| | ||||||||||||||||||| ||||    
T  104307 aatgaaaattgtttttacatctttctataaaacttttttcaaaaaaaa 104260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 295 - 403
Target Start/End: Original strand, 7071234 - 7071342
Alignment:
Q  295 ttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcctat 394  Q
    ||||||||||  ||||||||  |||||||||||||||||| | ||||| ||       | |||||||||||||||||||||| |||||||||  ||| ||    
T  7071234 ttattctcatgaaattaaatacaaattacattcaattttcacgctcttccattttctccgtaatcaatagtcaatgaaaattatttttacattttcccat 7071333  T
Q  395 aaaactttt 403  Q
     ||||||||    
T  7071334 gaaactttt 7071342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 366 - 461
Target Start/End: Original strand, 13146794 - 13146889
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataa 461  Q
    |||||| |||| |||||||||| | | ||||||||| || |||||| ||||||||||||||||| ||||||   || || ||||||||| ||||||    
T  13146794 caatgagaattatttttacatctttccataaaacttattccaaagagaacacaaaaaattatacctcaaatcactaagtgttagttttcataataa 13146889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 366 - 461
Target Start/End: Complemental strand, 29307281 - 29307186
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataa 461  Q
    ||||||||||| |||||||||| ||||||||||||| ||| |||||  |||||||||| ||   | |||| |  ||| ||||||||||||||||||    
T  29307281 caatgaaaattatttttacatcttcctataaaacttattttaaagattacacaaaaaactacgttacaaactactatattttagttttcttaataa 29307186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 366 - 467
Target Start/End: Complemental strand, 24432494 - 24432393
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgt 465  Q
    |||||| |||| |||||||||| | | || |||||| || ||| || ||||||||||||||||| ||||||   || || |||||||||||||||| |||    
T  24432494 caatgagaattatttttacatctttccatgaaacttattccaaggagaacacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgt 24432395  T
Q  466 ga 467  Q
    ||    
T  24432394 ga 24432393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 366 - 467
Target Start/End: Complemental strand, 25962542 - 25962441
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgt 465  Q
    |||||| |||| |||||||||| | | || |||||| || ||| || ||||||||||||||||| ||||||   || || |||||||||||||||| |||    
T  25962542 caatgagaattatttttacatctttccatgaaacttattccaaggagaacacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgt 25962443  T
Q  466 ga 467  Q
    ||    
T  25962442 ga 25962441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 366 - 423
Target Start/End: Original strand, 28907136 - 28907192
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaa 423  Q
    |||| ||||||||||||||||| |||||| |||||| ||||||||| |||||||||||    
T  28907136 caataaaaattgtttttacatcctcctat-aaacttatttcaaagataacacaaaaaa 28907192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 366 - 423
Target Start/End: Original strand, 28943531 - 28943587
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaa 423  Q
    |||| ||||||||||||||||| |||||| |||||| ||||||||| |||||||||||    
T  28943531 caataaaaattgtttttacatcctcctat-aaacttatttcaaagataacacaaaaaa 28943587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 366 - 467
Target Start/End: Complemental strand, 31316895 - 31316794
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgt 465  Q
    |||||| |||| |||||||||| | | || |||||| || ||| || ||||||||||||||||| ||||||   || || |||||||||||||||| |||    
T  31316895 caatgagaattatttttacatctttccatgaaacttattccaaggagaacacaaaaaattatacctcaaatcactaagtgttagttttcttaataactgt 31316796  T
Q  466 ga 467  Q
    ||    
T  31316795 ga 31316794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 366 - 467
Target Start/End: Complemental strand, 31690714 - 31690613
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgt 465  Q
    ||||||||||| |||||||||| | ||||||||||  || |||  | ||||||||||||||||| ||||||   || || ||| |||||||||||| |||    
T  31690714 caatgaaaattatttttacatctttctataaaactcattccaagaagaacacaaaaaattatacctcaaatcactaagtattaattttcttaataagtgt 31690615  T
Q  466 ga 467  Q
    ||    
T  31690614 ga 31690613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 293 - 345
Target Start/End: Complemental strand, 5984282 - 5984230
Alignment:
Q  293 gtttattctcatagaattaaatgaaaattacattcaattttctccctctttca 345  Q
    ||||||||||||| ||||||||| |||||||||| ||| ||||| ||||||||    
T  5984282 gtttattctcataaaattaaatgtaaattacattaaatattctctctctttca 5984230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 367 - 467
Target Start/End: Complemental strand, 8146106 - 8146006
Alignment:
Q  367 aatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtg 466  Q
    ||||| |||| |||||||||| | | || |||||| |||||| || ||||||||||||||||| ||||||   |  || |||||||||||||||| ||||    
T  8146106 aatgagaattatttttacatctttccatgaaacttatttcaaggagaacacaaaaaattatacctcaaatcactgagtgttagttttcttaataagtgtg 8146007  T
Q  467 a 467  Q
    |    
T  8146006 a 8146006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 411 - 467
Target Start/End: Complemental strand, 30893299 - 30893243
Alignment:
Q  411 aaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    ||||||||| ||| |||||| |||||| | ||||||||||||||||||||| |||||    
T  30893299 aaaacacaagaaactatactccaaattatcatgttttagttttcttaataagtgtga 30893243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 366 - 401
Target Start/End: Complemental strand, 10154022 - 10153987
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaactt 401  Q
    |||||||||||||||||||||| |||||||||||||    
T  10154022 caatgaaaattgtttttacatcttcctataaaactt 10153987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 293 - 332
Target Start/End: Complemental strand, 12792968 - 12792929
Alignment:
Q  293 gtttattctcatagaattaaatgaaaattacattcaattt 332  Q
    ||||||||||||| ||||||||| ||||||||||||||||    
T  12792968 gtttattctcataaaattaaatgcaaattacattcaattt 12792929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 353 - 467
Target Start/End: Original strand, 24439624 - 24439738
Alignment:
Q  353 cataatcaatagtcaatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttt 452  Q
    |||||| | ||| |||||| ||||||||||||||| | | || |||||| || |||  | ||||||||||||||||  ||||||| | ||||||||  ||    
T  24439624 cataataattagccaatgataattgtttttacatctttccatgaaacttattccaagaataacacaaaaaattatatctcaaattataatgttttaactt 24439723  T
Q  453 tcttaataaatgtga 467  Q
    | ||||||| |||||    
T  24439724 ttttaataagtgtga 24439738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 366 - 467
Target Start/End: Original strand, 12638954 - 12639055
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgt 465  Q
    |||||| |||| |||||||||| | | |||||| || || ||| || ||||||||||||||||| ||||||   ||  | |||||||||||||||| |||    
T  12638954 caatgagaattatttttacatctttccataaaatttattccaaggagaacacaaaaaattatacctcaaataactaaatgttagttttcttaataagtgt 12639053  T
Q  466 ga 467  Q
    ||    
T  12639054 ga 12639055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 366 - 467
Target Start/End: Complemental strand, 16286177 - 16286076
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgt 465  Q
    |||||| |||| |||||||||| |   || |||||| || |||||| ||||||||||||||||| ||||||   || || ||| |||||||||||| |||    
T  16286177 caatgagaattatttttacatcttttcatgaaacttattccaaagagaacacaaaaaattatacctcaaatcactaagtgttaattttcttaataagtgt 16286078  T
Q  466 ga 467  Q
    ||    
T  16286077 ga 16286076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 296 - 336
Target Start/End: Complemental strand, 104386 - 104346
Alignment:
Q  296 tattctcatagaattaaatgaaaattacattcaattttctc 336  Q
    |||||||||| ||||||||| | ||||||||||||||||||    
T  104386 tattctcataaaattaaatgcatattacattcaattttctc 104346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 353 - 461
Target Start/End: Original strand, 8143986 - 8144094
Alignment:
Q  353 cataatcaatagtcaatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttt 452  Q
    |||||||| ||  |||||| ||||  |||||| || | |||| |||||| || |||  |||| ||||||| |||||| |||||||  ||||||||| |||    
T  8143986 cataatcattaaccaatgagaattcgttttacttctttctatgaaacttattccaagaaaaatacaaaaatttatacctcaaattaatatgttttatttt 8144085  T
Q  453 tcttaataa 461  Q
    |||||||||    
T  8144086 tcttaataa 8144094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 411 - 467
Target Start/End: Complemental strand, 36413985 - 36413929
Alignment:
Q  411 aaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    ||||||||||||||||||  ||||| |  |||||||| ||||||||||||| |||||    
T  36413985 aaaacacaaaaaattatatctcaaactactatgtttttgttttcttaataagtgtga 36413929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 115; Significance: 4e-58; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 227 - 467
Target Start/End: Original strand, 77885 - 78125
Alignment:
Q  227 cacattttctttgtcccaaaatataagnnnnnnngacaaacttttatctttttcaatannnnnnnngtttattctcatagaattaaatgaaaattacatt 326  Q
    |||||||||||||||||||||||||||       |||||||||||||||||||||| |        ||||||||||||| ||||||||| ||||||||||    
T  77885 cacattttctttgtcccaaaatataagcaaaaaagacaaacttttatctttttcaagattttttttgtttattctcataaaattaaatgtaaattacatt 77984  T
Q  327 caattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaatta 426  Q
    |||||||| |  |||||||       ||||| |||| | |||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| ||    
T  77985 caattttcactttctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctatacaacttttttcaaagaaaacacaaaaaacta 78084  T
Q  427 tacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    ||||  ||||||||||||||||||||||||||||| |||||    
T  78085 tactctaaattcttatgttttagttttcttaataagtgtga 78125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 114; Significance: 1e-57; HSPs: 75)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 228 - 467
Target Start/End: Original strand, 47867806 - 47868045
Alignment:
Q  228 acattttctttgtcccaaaatataagnnnnnnngacaaacttttatctttttcaatannnnnnnngtttattctcatagaattaaatgaaaattacattc 327  Q
    ||||||||||||||||||||||||||       || ||||||||||||||||||| |          ||||||||||| ||||||||| |||||||||||    
T  47867806 acattttctttgtcccaaaatataagcaaaaaagaaaaacttttatctttttcaagatttttttttgttattctcataaaattaaatgcaaattacattc 47867905  T
Q  328 aattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattat 427  Q
    |||||||||  |||||||       ||||| |||||| |||||||||||||||||||||| |||||||||||||||| |||||||||||||||||| |||    
T  47867906 aattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaactat 47868005  T
Q  428 acttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    ||| |||||||||||||||||||||||||||||| |||||    
T  47868006 actccaaattcttatgttttagttttcttaataagtgtga 47868045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 294 - 467
Target Start/End: Original strand, 4058708 - 4058881
Alignment:
Q  294 tttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatccta 393  Q
    |||||||||||| ||||||||| ||||| |||||||||||||| ||||||||       ||||| |||||  |||||||||||||||||||||| |||||    
T  4058708 tttattctcataaaattaaatgcaaatttcattcaattttctctctctttcattttttccataaccaataaccaatgaaaattgtttttacatcttccta 4058807  T
Q  394 taaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    |||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  4058808 taaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataaatgtga 4058881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 228 - 467
Target Start/End: Complemental strand, 41414834 - 41414597
Alignment:
Q  228 acattttctttgtcccaaaatataagnnnnnnngacaaacttttatctttttcaatannnnnnnngtttattctcatagaattaaatgaaaattacattc 327  Q
    ||||||||||||||||||||||||||       |||||||||||||||||||||| |        ||||||||| ||| ||||||||| |||||||||||    
T  41414834 acattttctttgtcccaaaatataagtaaaaaagacaaacttttatctttttcaagattttttt-gtttattcttataaaattaaatgcaaattacattc 41414736  T
Q  328 aattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattat 427  Q
    |||||| || ||||||||       |||||||||||| |||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||    
T  41414735 aattttttctctctttcatttttt-cataatcaatagccaataaaaattgtttttacatcttcctataaaacttttttcaaagaaaacacaaaaaactat 41414637  T
Q  428 acttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    ||| || ||||||||||||||||||||||||||| |||||    
T  41414636 actccatattcttatgttttagttttcttaataagtgtga 41414597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 227 - 467
Target Start/End: Original strand, 2229173 - 2229413
Alignment:
Q  227 cacattttctttgtcccaaaatataagnnnnnnngacaaacttttatctttttcaatannnnnnnngtttattctcatagaattaaatgaaaattacatt 326  Q
    |||||||||||||||||||||||||||       |||||||||||||||||| |||||          |||||||||||  |||||||| ||||||||||    
T  2229173 cacattttctttgtcccaaaatataagcaaaaaagacaaacttttatcttttccaatatttttttttgttattctcataatattaaatgcaaattacatt 2229272  T
Q  327 caattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaatta 426  Q
    |||||||||   |||||||       ||||| |||||| |||| ||||||||||||||||| |||||||||||||||| |||||||||||||||||| ||    
T  2229273 caattttctttttctttcattttttccataaccaatagccaataaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaacta 2229372  T
Q  427 tacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    |||| |||||||||||||||||||||||||||||| |||||    
T  2229373 tactccaaattcttatgttttagttttcttaataagtgtga 2229413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 293 - 467
Target Start/End: Original strand, 20281583 - 20281757
Alignment:
Q  293 gtttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcct 392  Q
    ||||||||||||| ||||||||| |||||||||||||||||||   |||||||       ||||| |||||| |||||||||||||||||||||| ||||    
T  20281583 gtttattctcataaaattaaatgcaaattacattcaattttctttttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcct 20281682  T
Q  393 ataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    |||||||||||| |||||||||||||||||| |||||| |||||||||||||||||||||||||||||| |||||    
T  20281683 ataaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgtga 20281757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 293 - 467
Target Start/End: Original strand, 29203498 - 29203672
Alignment:
Q  293 gtttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcct 392  Q
    ||||||||||||| ||||||||| |||||||||||||||||||| ||||||||       ||||| |||||| |||||||||||||||||||||| ||||    
T  29203498 gtttattctcataaaattaaatgcaaattacattcaattttctctctctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcct 29203597  T
Q  393 ataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    ||||||   ||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||    
T  29203598 ataaaaaaatttgcaaagaaaacacaaaaaattatactccaaattcttatgttttagttttcttaataagtgtga 29203672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 227 - 467
Target Start/End: Original strand, 26916251 - 26916491
Alignment:
Q  227 cacattttctttgtcccaaaatataagnnnnnnngacaaacttttatctttttcaatannnnnnnngtttattctcatagaattaaatgaaaattacatt 326  Q
    ||||||||||||||| |||||||||||       || ||||||||||| ||||||| |        ||||||||||||| ||||||||| ||||||||||    
T  26916251 cacattttctttgtctcaaaatataagcaaaaaagataaacttttatccttttcaagattttttttgtttattctcataaaattaaatgcaaattacatt 26916350  T
Q  327 caattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaatta 426  Q
    ||||||| |   |||||||       ||||| |||||| |||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||  |    
T  26916351 caattttatttttctttcattttttccataaccaatagccaataaaaattgtttttacatcttcctataaaacttttttcaaagaaaacacaaaaaacca 26916450  T
Q  427 tacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    |||| |||||||||||||||||||||||||||||| |||||    
T  26916451 tactccaaattcttatgttttagttttcttaataagtgtga 26916491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 293 - 467
Target Start/End: Complemental strand, 17794701 - 17794527
Alignment:
Q  293 gtttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcct 392  Q
    ||||||||||||| ||||||||| |||||||||||||||||||| ||||| ||       |||||||||||| |||||||||||||||||||||| ||||    
T  17794701 gtttattctcataaaattaaatgtaaattacattcaattttctctctcttccaatttttccataatcaatagccaatgaaaattgtttttacatcttcct 17794602  T
Q  393 ataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    |||||| || ||||||||||||| ||||||| |||||||||||||||| | |||||||||||||||||| |||||    
T  17794601 ataaaatttatttcaaagaaaacgcaaaaaactatacttcaaattctttttttttagttttcttaataagtgtga 17794527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 227 - 467
Target Start/End: Original strand, 14332685 - 14332926
Alignment:
Q  227 cacattttctttgtcccaaaatataagnnnnnnngacaaacttttatctttttcaatannnnnnnn-gtttattctcatagaattaaatgaaaattacat 325  Q
    |||||||||||||||||||||||||||       |||||||||||||||||| ||| |         ||||||||||||| ||||||||| |||||||||    
T  14332685 cacattttctttgtcccaaaatataagcaaaaaagacaaacttttatcttttccaagatttttttttgtttattctcataaaattaaatgcaaattacat 14332784  T
Q  326 tcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaatt 425  Q
    |||||||||||  |||||||       ||||| |||| | |||| ||||||||||||||||| |||||||||||||||| ||||||||||||||||||      
T  14332785 tcaattttctctttctttcatttttttcataaccaatggccaataaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaacc 14332884  T
Q  426 atacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    ||| | |||||||||||||||||||||||||||||| |||||    
T  14332885 atattccaaattcttatgttttagttttcttaataagtgtga 14332926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 227 - 467
Target Start/End: Complemental strand, 28669226 - 28668987
Alignment:
Q  227 cacattttctttgtcccaaaatataagnnnnnnngacaaacttttatctttttcaatannnnnnnngtttattctcatagaattaaatgaaaattacatt 326  Q
    |||||||||||||||||||||||||||       |||||| ||||||||||||||| |        ||||||||||||| ||||||||  ||||||||||    
T  28669226 cacattttctttgtcccaaaatataagcaaaaaggacaaatttttatctttttcaagattttttttgtttattctcataaaattaaatacaaattacatt 28669127  T
Q  327 caattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaatta 426  Q
    |||||||||| ||||||||       |||||  ||||  |||||||||||||||||||||  ||||||||||| ||||  ||||||||||||||||| ||    
T  28669126 caattttctctctctttcatttttt-cataactaataaccaatgaaaattgtttttacattttcctataaaaccttttctaaagaaaacacaaaaaacta 28669028  T
Q  427 tacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    ||||| ||||||||||||||||||||||||||||| |||||    
T  28669027 tactttaaattcttatgttttagttttcttaataagtgtga 28668987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 293 - 467
Target Start/End: Original strand, 20716172 - 20716346
Alignment:
Q  293 gtttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcct 392  Q
    ||||||||||||| ||||||||| |||||||||||||||||||| ||||||||       ||||| |||||| |||||||||||||||||||||| | ||    
T  20716172 gtttattctcataaaattaaatgcaaattacattcaattttctcactctttcattttttccataaccaatagccaatgaaaattgtttttacatctttct 20716271  T
Q  393 ataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    |||||||||||| |||| ||||  ||||| | |||||| |||||||||||||||||||||||||||||| |||||    
T  20716272 ataaaactttttccaaacaaaagtcaaaagactatactccaaattcttatgttttagttttcttaataagtgtga 20716346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 316 - 467
Target Start/End: Original strand, 7654632 - 7654783
Alignment:
Q  316 aaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaac 415  Q
    |||||||||||||||||||||  |||||||       |||||||||||| |||||||||||||||||| ||| |||||||||||||||| ||||||||||    
T  7654632 aaaattacattcaattttctctttctttcattttttccataatcaatagccaatgaaaattgtttttatatcttcctataaaactttttccaaagaaaac 7654731  T
Q  416 acaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    |||||||| |||||| |||||| ||||||||||||||||||||||| |||||    
T  7654732 acaaaaaactatactccaaatttttatgttttagttttcttaataagtgtga 7654783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 293 - 467
Target Start/End: Complemental strand, 5483438 - 5483264
Alignment:
Q  293 gtttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcct 392  Q
    ||||||||||||  ||||||||| | |||||||||||||||||| ||||| ||       ||||| || ||| |||||||||||||||||||||| ||||    
T  5483438 gtttattctcatgaaattaaatgcatattacattcaattttctctctcttccattttctccataaccagtagccaatgaaaattgtttttacatcttcct 5483339  T
Q  393 ataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    || |||||| ||| ||||||||||||||||||||||||||||||| |||||||||||||||||||| || |||||    
T  5483338 attaaacttattttaaagaaaacacaaaaaattatacttcaaatttttatgttttagttttcttaacaagtgtga 5483264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 293 - 467
Target Start/End: Original strand, 39078149 - 39078322
Alignment:
Q  293 gtttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcct 392  Q
    ||||||||||||| ||||||||| | |||||||||||||||||  ||||||||        ||||  ||||| |||||||||||||||||||||| || |    
T  39078149 gtttattctcataaaattaaatgcacattacattcaattttctttctctttcattttttcaataactaatagccaatgaaaattgtttttacatcttc-t 39078247  T
Q  393 ataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    |||||||||||| |||||||||||||||||| |||||| |||||||||||||||||||||||||||||| |||||    
T  39078248 ataaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgtga 39078322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 316 - 461
Target Start/End: Complemental strand, 16604983 - 16604838
Alignment:
Q  316 aaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaac 415  Q
    ||||||||||||||||||||| ||||||||       |||||  ||||| |||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  16604983 aaaattacattcaattttctctctctttcattttttccataactaatagccaatgaaaattgttttaacatcttcctataaaacttttttcaaagaaaac 16604884  T
Q  416 acaaaaaattatacttcaaattcttatgttttagttttcttaataa 461  Q
    |||||||| ||||||  |||||||||||||||||||||||||||||    
T  16604883 acaaaaaactatactctaaattcttatgttttagttttcttaataa 16604838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 293 - 467
Target Start/End: Original strand, 10069689 - 10069863
Alignment:
Q  293 gtttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcct 392  Q
    ||||||||||||| ||||||||| |||| |||||||||||||    |||||||       ||||| |||||| |||||||||||||||||||||| | ||    
T  10069689 gtttattctcataaaattaaatgcaaataacattcaattttccttttctttcactttttccataaccaatagccaatgaaaattgtttttacatctttct 10069788  T
Q  393 ataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    |||||||||||||| ||||||| |||||||| |||||| |||||||||||||||||||||| ||||||| |||||    
T  10069789 ataaaacttttttcgaagaaaatacaaaaaactatactacaaattcttatgttttagttttattaataagtgtga 10069863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 301 - 467
Target Start/End: Original strand, 24940365 - 24940531
Alignment:
Q  301 tcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcctataaaact 400  Q
    ||||| ||||||||| |||||||||| ||||||||| ||||||||       ||||| |||||  ||| |||||||||||||||||| || |||||||||    
T  24940365 tcataaaattaaatggaaattacatttaattttctctctctttcattttctccataaccaataaccaacgaaaattgtttttacatcttcttataaaact 24940464  T
Q  401 tttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    |||| ||||||||| |||||||| |||||| |||||||||| |||||||||||||||||||||||||    
T  24940465 ttttccaaagaaaatacaaaaaactatactccaaattcttacgttttagttttcttaataaatgtga 24940531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 293 - 461
Target Start/End: Complemental strand, 56318230 - 56318062
Alignment:
Q  293 gtttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcct 392  Q
    ||||||| ||||| ||||||||| |||||||||||||||||||| ||||||||       ||||| ||||||  ||||||||||||||||||||| ||||    
T  56318230 gtttattatcataaaattaaatgtaaattacattcaattttctctctctttcattttttccataaccaatagctaatgaaaattgtttttacatcttcct 56318131  T
Q  393 ataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataa 461  Q
    ||||| |||||| ||||||||||||||||||  |||||  |||||||||||||||| |||| |||||||    
T  56318130 ataaacctttttccaaagaaaacacaaaaaaccatactctaaattcttatgttttaatttttttaataa 56318062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 293 - 467
Target Start/End: Original strand, 55580661 - 55580836
Alignment:
Q  293 gtttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnnc-ataatcaatagtcaatgaaaattgtttttacatcatcc 391  Q
    ||||||||||||| ||||||||| |||||||||| || ||||||  |||||||       | ||||  ||||| |||||||||||||||||||||| |||    
T  55580661 gtttattctcataaaattaaatgcaaattacattaaaatttctctttctttcatttttttccataactaatagccaatgaaaattgtttttacatcttcc 55580760  T
Q  392 tataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    |||| |||||||| ||||||||||| |||||| |||||| ||||||||||||||| ||||||||||||||||||||    
T  55580761 tatacaactttttccaaagaaaacaaaaaaaactatactccaaattcttatgtttcagttttcttaataaatgtga 55580836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 293 - 467
Target Start/End: Complemental strand, 1585507 - 1585335
Alignment:
Q  293 gtttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcct 392  Q
    ||||||||||||| |||||||||||||||||||||||||||||| ||||| ||       |||||||||||| |||| ||||||||||| ||||| | |     
T  1585507 gtttattctcataaaattaaatgaaaattacattcaattttctctctcttccattttctccataatcaatagccaataaaaattgttttaacatctttcc 1585408  T
Q  393 ataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    || |||||| |||||||||||||||  ||||||||||| |||| |||||||||||| ||||||||| || |||||    
T  1585407 atgaaacttatttcaaagaaaacac--aaaattatactccaaaatcttatgttttacttttcttaacaagtgtga 1585335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 293 - 463
Target Start/End: Complemental strand, 35310902 - 35310732
Alignment:
Q  293 gtttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcct 392  Q
    ||||||||||||  ||||||||  |||||||||| ||||||||| ||||| ||       ||||| |||||| |||||||||||||||||||||| | |     
T  35310902 gtttattctcatgaaattaaatacaaattacatttaattttctctctcttccattttttccataaccaatagccaatgaaaattgtttttacatctttcc 35310803  T
Q  393 ataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaat 463  Q
    || |||||| ||  ||||||||||||||||| ||| || ||||||||||||||||||||||||||||||||    
T  35310802 atgaaacttattctaaagaaaacacaaaaaactatgctacaaattcttatgttttagttttcttaataaat 35310732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 357 - 467
Target Start/End: Complemental strand, 21722778 - 21722668
Alignment:
Q  357 atcaatagtcaatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttctt 456  Q
    |||||||||||||||||||| |||||||||| ||||||||||||| || ||||||||||| |||| | ||||||| ||||||||||||||||||||| ||    
T  21722778 atcaatagtcaatgaaaattatttttacatcttcctataaaacttattacaaagaaaacataaaacactatacttaaaattcttatgttttagttttatt 21722679  T
Q  457 aataaatgtga 467  Q
    ||||| |||||    
T  21722678 aataagtgtga 21722668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 381 - 461
Target Start/End: Original strand, 16473828 - 16473908
Alignment:
Q  381 ttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataa 461  Q
    ||||||| ||||||||||||||||||||||||||||||||||| |||||| ||||||||||| ||||||||||||||||||    
T  16473828 ttacatcttcctataaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatattttagttttcttaataa 16473908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 367 - 501
Target Start/End: Complemental strand, 5064741 - 5064607
Alignment:
Q  367 aatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtg 466  Q
    ||||||||||||||||||||| |||| |||||||| ||||||||| |||||||||||||||  | ||||||  |||||||||||||||||||||| ||||    
T  5064741 aatgaaaattgtttttacatcttcctttaaaacttatttcaaagataacacaaaaaattatgttacaaattactatgttttagttttcttaataagtgtg 5064642  T
Q  467 annnnnnnngcttataatttaggacggagggagta 501  Q
    |        ||||||||| | ||||||||||||||    
T  5064641 attttttttgcttataatatgggacggagggagta 5064607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 295 - 466
Target Start/End: Original strand, 42915523 - 42915695
Alignment:
Q  295 ttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnnc-ataatcaatagtcaatgaaaattgtttttacatcatccta 393  Q
    ||||||||||  ||||||||| |||||||||| ||||||||| |||||| |       | |||| |||| | |||||||||||||||||||||| | | |    
T  42915523 ttattctcatgaaattaaatgcaaattacatttaattttctctctcttttatttttttccataaccaattgccaatgaaaattgtttttacatctttcca 42915622  T
Q  394 taaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtg 466  Q
    | |||||| || |||||||||||||||||| ||| || ||||||||||| |||||||||| ||||||| ||||    
T  42915623 tgaaacttattccaaagaaaacacaaaaaactatgctacaaattcttatattttagtttttttaataagtgtg 42915695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 366 - 459
Target Start/End: Original strand, 32203278 - 32203371
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaat 459  Q
    |||||||||||||||||| ||| ||| ||||||||| |||||||||||  |||||||| ||||||| ||||||||||||||||||||| |||||    
T  32203278 caatgaaaattgtttttatatcttcccataaaacttatttcaaagaaacaacaaaaaactatactttaaattcttatgttttagtttttttaat 32203371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 295 - 467
Target Start/End: Complemental strand, 48793784 - 48793616
Alignment:
Q  295 ttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcctat 394  Q
    ||||||||||  ||||||||| |||||||||| |||||||||  ||||| |       ||||| |||| | |||||||||||||||||||||| ||| ||    
T  48793784 ttattctcatgaaattaaatgcaaattacatttaattttctc--tcttttatttttttcataaccaattgccaatgaaaattgtttttacatcttcccat 48793687  T
Q  395 aaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
     |||||| || ||||||||||||  |||| ||| || |||||||||||| ||||||||||||||||| |||||    
T  48793686 gaaacttattccaaagaaaacac--aaaactatgctacaaattcttatgctttagttttcttaataagtgtga 48793616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 307 - 463
Target Start/End: Complemental strand, 32323407 - 32323252
Alignment:
Q  307 aattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcctataaaacttttttc 406  Q
    ||||||||| ||||||| |||||||||||| ||||| ||        ||||||||  |||||||||||||||||||||||| ||| ||||| ||| |||     
T  32323407 aattaaatgtaaattac-ttcaattttctctctcttccattttctcaataatcaagcgtcaatgaaaattgtttttacatcttcccataaatcttatttt 32323309  T
Q  407 aaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaat 463  Q
    |||||||||||||||||  |||||||||||| |||  ||||| ||||||||| ||||    
T  32323308 aaagaaaacacaaaaaacaatacttcaaatttttaaattttaattttcttaacaaat 32323252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 307 - 430
Target Start/End: Original strand, 5815475 - 5815598
Alignment:
Q  307 aattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcctataaaacttttttc 406  Q
    |||||||||  ||||||||||||||||||| ||||| |        ||||||||||||||||| |||||| |||||||||| ||  ||||||||| ||||    
T  5815475 aattaaatgtcaattacattcaattttctctctcttcctttttttccataatcaatagtcaataaaaattatttttacatcttctcataaaacttatttc 5815574  T
Q  407 aaagaaaacacaaaaaattatact 430  Q
    ||||||||||||||||| ||||||    
T  5815575 aaagaaaacacaaaaaactatact 5815598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 366 - 467
Target Start/End: Complemental strand, 28142709 - 28142608
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgt 465  Q
    |||||||||||||||||||||| ||||||||||||| ||| ||||| |||||||||||||||  | |||| | | || |||||||||||||||||| |||    
T  28142709 caatgaaaattgtttttacatcctcctataaaacttattttaaagataacacaaaaaattatgttacaaactatcatattttagttttcttaataagtgt 28142610  T
Q  466 ga 467  Q
    ||    
T  28142609 ga 28142608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 295 - 467
Target Start/End: Complemental strand, 8683462 - 8683292
Alignment:
Q  295 ttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcctat 394  Q
    ||||||||||  ||||||||  |||||||||| |||||||||  ||||| |       ||||| |||| | ||||||||||| |||||||||  | | ||    
T  8683462 ttattctcatgaaattaaatacaaattacatttaattttctc--tcttttattttttccataaccaattgccaatgaaaattatttttacatatttccat 8683365  T
Q  395 aaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
     |||||| || |||||||||||||||||| ||| || |||||||||||| ||||||||| ||||||| |||||    
T  8683364 gaaacttattccaaagaaaacacaaaaaactatgctacaaattcttatgctttagtttttttaataagtgtga 8683292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 295 - 467
Target Start/End: Original strand, 14583723 - 14583895
Alignment:
Q  295 ttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcctat 394  Q
    ||||||||||  ||||||||| ||||||||||||||| || | ||||| ||         ||||| |||| |||||||||| ||||||||||| ||| ||    
T  14583723 ttattctcatgaaattaaatgcaaattacattcaattatcactctcttccattttctttttaatccatagccaatgaaaat-gtttttacatcttcccat 14583821  T
Q  395 aaaacttttttcaaagaaaa-cacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
     |||||| ||| |||||||| |||||| || ||||  | |||||||||| ||||||||||||||||||||||||    
T  14583822 gaaacttattttaaagaaaaacacaaataactatatattaaattcttatattttagttttcttaataaatgtga 14583895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 407 - 467
Target Start/End: Complemental strand, 50080502 - 50080442
Alignment:
Q  407 aaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||||||||| |||||    
T  50080502 aaagaaaacacaaaaaattatactcaaaattcttatgttttagttttcttaataagtgtga 50080442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 366 - 467
Target Start/End: Original strand, 32410393 - 32410494
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgt 465  Q
    ||||||||||| |||||||||| ||||||||||||| ||||||||| ||||||||||| | || |  ||| |  |||||| ||||||||||||||| |||    
T  32410393 caatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaaactttattataaactactatgttgtagttttcttaataagtgt 32410492  T
Q  466 ga 467  Q
    ||    
T  32410493 ga 32410494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 366 - 459
Target Start/End: Complemental strand, 46070609 - 46070517
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaat 459  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||| |||||||||| | ||  | |||| |  ||||||||||||||||||||    
T  46070609 caatgaaaattgtttttacatcttcctataaaacttatttcaaagacaacacaaaaact-atgttacaaactactatgttttagttttcttaat 46070517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 366 - 427
Target Start/End: Original strand, 49080322 - 49080383
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattat 427  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||| || ||||||||||||    
T  49080322 caatgaaaattgtttttacatcttcctataaaacttatttcaaagataagacaaaaaattat 49080383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 411 - 467
Target Start/End: Complemental strand, 12002675 - 12002619
Alignment:
Q  411 aaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    ||||||||||||| |||||| |||||||||||||||||||||||||||||| |||||    
T  12002675 aaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgtga 12002619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 366 - 454
Target Start/End: Complemental strand, 47516278 - 47516190
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttc 454  Q
    ||||||||||||||||||| || ||||||||||||| ||||||||| ||||||||||| |||| | |||| |  ||||||||| |||||    
T  47516278 caatgaaaattgtttttacttcttcctataaaacttatttcaaagataacacaaaaaactatattacaaactactatgttttacttttc 47516190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 353 - 447
Target Start/End: Complemental strand, 32280103 - 32280009
Alignment:
Q  353 cataatcaatagtcaatgaaaattgtttttacatcatcct-ataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgtttt 447  Q
    |||||||||||| |||| |||||||||||||||| ||| | || |||| | ||  |||||||||||||||||||||||| ||||||||||||||||    
T  32280103 cataatcaatagccaattaaaattgtttttacat-atcttcatcaaacctattctaaagaaaacacaaaaaattatactccaaattcttatgtttt 32280009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 365 - 423
Target Start/End: Original strand, 29511489 - 29511547
Alignment:
Q  365 tcaatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaa 423  Q
    ||||||||||||||||||||||| ||||||||||||| ||| ||||| |||||||||||    
T  29511489 tcaatgaaaattgtttttacatcttcctataaaacttattttaaagataacacaaaaaa 29511547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 366 - 467
Target Start/End: Complemental strand, 8013176 - 8013075
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgt 465  Q
    |||| ||||||||||||||||| | |||| |||||| |||||| || ||||||| ||| |||  | |||| |  ||||||||||||||||||||||||||    
T  8013176 caataaaaattgtttttacatctttctatgaaacttatttcaaggataacacaagaaactatgttacaaactactatgttttagttttcttaataaatgt 8013077  T
Q  466 ga 467  Q
    ||    
T  8013076 ga 8013075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 366 - 463
Target Start/End: Complemental strand, 17799221 - 17799124
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaat 463  Q
    |||||||||||||||||||||| ||| ||||||||  || |||  | ||||| | |||||||||| |||||| | || ||||||||||||||||||||    
T  17799221 caatgaaaattgtttttacatcttcccataaaactaattccaagaagaacaccagaaattatactccaaattatcatattttagttttcttaataaat 17799124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 366 - 467
Target Start/End: Original strand, 29899775 - 29899876
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgt 465  Q
    |||||| |||| |||||||||| | | ||||||||| || ||| || ||||||||||||||||| ||||||   || || ||||||||||||||||||||    
T  29899775 caatgagaattatttttacatctttccataaaacttattccaaggagaacacaaaaaattatacctcaaatcactacgtgttagttttcttaataaatgt 29899874  T
Q  466 ga 467  Q
    ||    
T  29899875 ga 29899876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 293 - 461
Target Start/End: Complemental strand, 52535745 - 52535589
Alignment:
Q  293 gtttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcct 392  Q
    ||||||||||||| ||||||||| |||||| ||||||||||||| ||||||||        |||| |||||| ||||||||||| ||||||| | |   |    
T  52535745 gtttattctcataaaattaaatgcaaattatattcaattttctctctctttcactttttctataaccaatagccaatgaaaattatttttacttta---t 52535649  T
Q  393 ataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataa 461  Q
    |||||| |||||  |||||||||         |||||| |||||||||||| |||||||||||||||||    
T  52535648 ataaaaatttttctaaagaaaac---------tatactccaaattcttatgctttagttttcttaataa 52535589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 307 - 467
Target Start/End: Original strand, 19351852 - 19352018
Alignment:
Q  307 aattaaatgaaaattacattcaatttt-ctccctctttcannnnnnncataatcaatagtcaatgaaaattgttttta-catcatcctataaaacttttt 404  Q
    ||||||||| ||||||||||||||||| ||| || || ||       |||||  ||||| |||||||||||||||||| |||| ||| || |||||| ||    
T  19351852 aattaaatgcaaattacattcaatttttctctctattccattgttttcataactaatagccaatgaaaattgtttttaacatcttcccatgaaacttatt 19351951  T
Q  405 tcaaagaaaacaca---aaaaattatacttcaaattctt-atgttttagttttcttaataaatgtga 467  Q
    |||| |||||||||   ||||| |||||| ||| || || ||||||||||||||||||||| |||||    
T  19351952 tcaatgaaaacacacaaaaaaactatactccaatttttttatgttttagttttcttaataagtgtga 19352018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 307 - 430
Target Start/End: Original strand, 50145742 - 50145864
Alignment:
Q  307 aattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcctataaaacttttttc 406  Q
    |||||||||  ||||||||| ||||||| | ||||| ||       ||| |||||||| ||||||||||||| |||||||| ||| ||||||||| || |    
T  50145742 aattaaatgttaattacatttaattttccctctcttccattttctccattatcaatagccaatgaaaattgtgtttacatcttcccataaaacttattcc 50145841  T
Q  407 aaagaaaacacaaaaaattatact 430  Q
    |||| ||||||||| |||||||||    
T  50145842 aaag-aaacacaaacaattatact 50145864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 391 - 460
Target Start/End: Complemental strand, 17236331 - 17236262
Alignment:
Q  391 ctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaata 460  Q
    |||| |||||| ||||||  | ||||||||||||||||| ||||| | ||||||||||||||||||||||    
T  17236331 ctatgaaacttatttcaagaagaacacaaaaaattatacctcaaactattatgttttagttttcttaata 17236262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 366 - 467
Target Start/End: Complemental strand, 29180472 - 29180371
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgt 465  Q
    |||||| |||| |||||||||| | |||| |||||| || ||| || ||||||||||||||||| ||||||   || || |||||||||||||||| |||    
T  29180472 caatgagaattatttttacatctttctatgaaacttattccaaggagaacacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgt 29180373  T
Q  466 ga 467  Q
    ||    
T  29180372 ga 29180371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 293 - 387
Target Start/End: Original strand, 35529664 - 35529758
Alignment:
Q  293 gtttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatc 387  Q
    |||||| |||||| ||||||||| ||||||| ||||||||| || ||||||||       ||||| |||||  ||||||||||||||||||||||    
T  35529664 gtttatgctcataaaattaaatgcaaattactttcaattttatctctctttcattttttccataaccaatacccaatgaaaattgtttttacatc 35529758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 366 - 467
Target Start/End: Complemental strand, 28318504 - 28318408
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgt 465  Q
    |||||||||||||||||||||| |||||||||  || ||||||||| ||||||||||| |||  | ||||    |||||||||||||| ||||||| |||    
T  28318504 caatgaaaattgtttttacatcttcctataaa--ttatttcaaagataacacaaaaaactatgttacaaa---ctatgttttagttttgttaataagtgt 28318410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 295 - 387
Target Start/End: Complemental strand, 25297380 - 25297288
Alignment:
Q  295 ttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatc 387  Q
    ||||||||||  ||||||||| ||||||||||||||||||   |||||  |       |||||||||||| ||||||||||||||||||||||    
T  25297380 ttattctcatgaaattaaatgtaaattacattcaattttccatctcttctattttctccataatcaatagccaatgaaaattgtttttacatc 25297288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 373 - 467
Target Start/End: Complemental strand, 5222346 - 5222252
Alignment:
Q  373 aattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    ||||||||||||||  |  ||| |||||| ||||||  | ||||||||||||||||  |||||||  ||||| |||||||||||||||| |||||    
T  5222346 aattgtttttacatttttttatgaaacttatttcaagaagaacacaaaaaattataactcaaattactatgtattagttttcttaataagtgtga 5222252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 413 - 463
Target Start/End: Original strand, 7438760 - 7438810
Alignment:
Q  413 aacacaaaaaattatacttcaaattcttatgttttagttttcttaataaat 463  Q
    ||||| ||||| |||||| |||||| |||||||||||||||||||||||||    
T  7438760 aacaccaaaaactatactccaaattattatgttttagttttcttaataaat 7438810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 365 - 467
Target Start/End: Complemental strand, 9798136 - 9798034
Alignment:
Q  365 tcaatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatg 464  Q
    ||||||| |||| |||||||||| | | || |||||| |||||| || ||| ||||||||||||| ||||||   ||  | |||||||||||||||||||    
T  9798136 tcaatgagaattatttttacatctttccatgaaacttatttcaaggagaacgcaaaaaattatacctcaaatcactaaatgttagttttcttaataaatg 9798037  T
Q  465 tga 467  Q
    |||    
T  9798036 tga 9798034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 365 - 467
Target Start/End: Original strand, 38940928 - 38941030
Alignment:
Q  365 tcaatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatg 464  Q
    ||||||| |||| |||||||||| |   || |||||| || ||| || ||||||||||||||||| ||||||  ||| || |||||||||||||||| ||    
T  38940928 tcaatgagaattatttttacatcttttaatgaaacttattccaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtg 38941027  T
Q  465 tga 467  Q
    |||    
T  38941028 tga 38941030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 366 - 467
Target Start/End: Complemental strand, 30012014 - 30011913
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgt 465  Q
    |||||| ||||||||||||||| | | || |||||| || |||| | ||||||||||||||||| |||||||   || |||||  ||||||||||| |||    
T  30012014 caatgataattgtttttacatctttccatgaaacttattccaaaaataacacaaaaaattatacctcaaattacaatattttaactttcttaataagtgt 30011915  T
Q  466 ga 467  Q
    ||    
T  30011914 ga 30011913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 366 - 467
Target Start/End: Complemental strand, 30776544 - 30776443
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgt 465  Q
    |||||| |||| |||||||||| | | || |||||| || ||| || ||||||||||||||||| ||||||   || || |||||||||||||||| |||    
T  30776544 caatgagaattatttttacatctttccatgaaacttattccaaggagaacacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgt 30776445  T
Q  466 ga 467  Q
    ||    
T  30776444 ga 30776443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 366 - 467
Target Start/End: Original strand, 30777547 - 30777648
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgt 465  Q
    |||||| |||| |||||||||| | | || |||||| |||||| || ||||||||||||||||| ||||||   ||  | |||||||||||||||| |||    
T  30777547 caatgagaattatttttacatctttccatgaaacttatttcaaggagaacacaaaaaattatacctcaaatcactaattgttagttttcttaataagtgt 30777646  T
Q  466 ga 467  Q
    ||    
T  30777647 ga 30777648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 366 - 467
Target Start/End: Complemental strand, 32012387 - 32012286
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgt 465  Q
    |||||| |||| |||||||||| | | || ||||||  || || || ||||||||||||||||| ||||||  ||| || |||||||||||||||| |||    
T  32012387 caatgagaattatttttacatctttccatgaaacttaatttaaggagaacacaaaaaattatacctcaaatcattaagtgttagttttcttaataagtgt 32012288  T
Q  466 ga 467  Q
    ||    
T  32012287 ga 32012286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 366 - 467
Target Start/End: Original strand, 37788511 - 37788612
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgt 465  Q
    |||||| |||| |||||||||| | | || |||||| || ||| || ||||||||||||||||| ||||||   || || |||||||||||||||| |||    
T  37788511 caatgagaattatttttacatctttccatgaaacttattccaaggagaacacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgt 37788610  T
Q  466 ga 467  Q
    ||    
T  37788611 ga 37788612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 366 - 423
Target Start/End: Original strand, 37911949 - 37912006
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaa 423  Q
    |||||||||||||||||||||  | ||||||||||| ||| ||||| |||||||||||    
T  37911949 caatgaaaattgtttttacatatttctataaaacttattttaaagataacacaaaaaa 37912006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 366 - 467
Target Start/End: Complemental strand, 39970049 - 39969948
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgt 465  Q
    |||||| |||| |||||||||| | | || |||||| || ||| || ||||||||||||||||| ||||||   || || |||||||||||||||| |||    
T  39970049 caatgagaattatttttacatctttccatgaaacttattccaaggagaacacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgt 39969950  T
Q  466 ga 467  Q
    ||    
T  39969949 ga 39969948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 366 - 467
Target Start/End: Original strand, 50768505 - 50768606
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgt 465  Q
    ||||||||||| |||||||||| | | || |||||| || ||| |||||||||||||||||||  || |||   || || |||||||||||||||| |||    
T  50768505 caatgaaaattatttttacatctttccatgaaacttattccaaggaaaacacaaaaaattatatctcgaatcactaagtattagttttcttaataagtgt 50768604  T
Q  466 ga 467  Q
    ||    
T  50768605 ga 50768606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 366 - 467
Target Start/End: Complemental strand, 53677539 - 53677438
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgt 465  Q
    |||||| |||| |||||||||| | |||| |||||  || ||| || ||||||||||||||||| ||||||   || || |||||||||||||||| |||    
T  53677539 caatgagaattatttttacatctttctatgaaactcattccaaggagaacacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgt 53677440  T
Q  466 ga 467  Q
    ||    
T  53677439 ga 53677438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 366 - 467
Target Start/End: Original strand, 53848525 - 53848626
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgt 465  Q
    |||| |||||||||||||| || |||||||||| || |||||| || ||||||| ||| |||  | |||| |  |||||||| ||||||||||||| |||    
T  53848525 caattaaaattgtttttacgtcttcctataaaaattatttcaaggataacacaagaaactatgttgcaaactactatgtttttgttttcttaataagtgt 53848624  T
Q  466 ga 467  Q
    ||    
T  53848625 ga 53848626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 366 - 466
Target Start/End: Complemental strand, 5841866 - 5841766
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgt 465  Q
    ||||||||||| |||||||||| |||||||||| || |||||| || ||||||| ||| |||  | |||| |  |||| ||||||||| | |||||||||    
T  5841866 caatgaaaattatttttacatcttcctataaaatttatttcaaggataacacaagaaactatgttgcaaactactatgctttagttttataaataaatgt 5841767  T
Q  466 g 466  Q
    |    
T  5841766 g 5841766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 411 - 463
Target Start/End: Original strand, 52713160 - 52713212
Alignment:
Q  411 aaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaat 463  Q
    ||||||||||||||||||||||||||   || || ||||||||||||||||||    
T  52713160 aaaacacaaaaaattatacttcaaatcactaagtattagttttcttaataaat 52713212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 359 - 441
Target Start/End: Original strand, 31280253 - 31280329
Alignment:
Q  359 caatagtcaatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattctta 441  Q
    |||||| ||||||||||| |||||||||      ||||||||| || |||||||||||||||||| ||||||  |||||||||    
T  31280253 caatagccaatgaaaattatttttacat------ataaaacttattccaaagaaaacacaaaaaactatactctaaattctta 31280329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 372 - 418
Target Start/End: Complemental strand, 8178320 - 8178274
Alignment:
Q  372 aaattgtttttacatcatcctataaaacttttttcaaagaaaacaca 418  Q
    |||||||||||||||| || |||||||||| ||||||||| ||||||    
T  8178320 aaattgtttttacatcttcttataaaacttatttcaaagataacaca 8178274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 366 - 467
Target Start/End: Complemental strand, 3043227 - 3043126
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgt 465  Q
    |||||| |||| |||||||||| | | || |||||| |||||| ||  |||||||||||||||| |||| |   || || |||||||||||||||| |||    
T  3043227 caatgagaattatttttacatctttccatgaaacttatttcaaggagtacacaaaaaattatacctcaactcactaagtgttagttttcttaataagtgt 3043128  T
Q  466 ga 467  Q
    ||    
T  3043127 ga 3043126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 366 - 467
Target Start/End: Complemental strand, 10591563 - 10591462
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgt 465  Q
    |||||| |||| |||||||||| | | || |||||| || ||| || ||||||||||||||||| ||||||   ||  | |||||||||||||||| |||    
T  10591563 caatgagaattatttttacatctttccatgaaacttattccaaggagaacacaaaaaattatacctcaaatcactaaatgttagttttcttaataagtgt 10591464  T
Q  466 ga 467  Q
    ||    
T  10591463 ga 10591462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 366 - 399
Target Start/End: Complemental strand, 23978202 - 23978169
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaac 399  Q
    |||||||||||||||||||||| |||||||||||    
T  23978202 caatgaaaattgtttttacatcttcctataaaac 23978169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 419 - 467
Target Start/End: Complemental strand, 4443133 - 4443086
Alignment:
Q  419 aaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    |||||| ||||| |||||||||||| |||| ||||||||||||||||||    
T  4443133 aaaaataatactgcaaattcttatg-tttaattttcttaataaatgtga 4443086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 410 - 462
Target Start/End: Complemental strand, 31532496 - 31532444
Alignment:
Q  410 gaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaa 462  Q
    ||||||| |||||| ||||||  ||||| | ||||||||||||||||||||||    
T  31532496 gaaaacataaaaaactatactctaaattgtaatgttttagttttcttaataaa 31532444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 407 - 467
Target Start/End: Original strand, 51495250 - 51495310
Alignment:
Q  407 aaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    ||||| ||||||||||||||||| ||||||  ||| || ||| |||||||||||| |||||    
T  51495250 aaagagaacacaaaaaattatacctcaaatcattaagtgttaattttcttaataactgtga 51495310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 114; Significance: 1e-57; HSPs: 82)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 293 - 467
Target Start/End: Original strand, 47864189 - 47864363
Alignment:
Q  293 gtttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcct 392  Q
    ||||||||||||| ||||||||| ||||||||||||||||| || ||||||||       ||||||||||||||||||||||||||||||||||| ||||    
T  47864189 gtttattctcataaaattaaatgcaaattacattcaattttttctctctttcatttttttcataatcaatagtcaatgaaaattgtttttacatcttcct 47864288  T
Q  393 ataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    ||||||||||||||||||||||  ||||||| |||||| |||||||| |||||||||||||||||||||||||||    
T  47864289 ataaaacttttttcaaagaaaatgcaaaaaactatactccaaattctcatgttttagttttcttaataaatgtga 47864363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 295 - 467
Target Start/End: Complemental strand, 50651161 - 50650989
Alignment:
Q  295 ttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcctat 394  Q
    ||||||||||| ||||||||| |||||||||||||||||||| |||||| |       ||||| ||||||||||||||||||||||||||||| ||||||    
T  50651161 ttattctcataaaattaaatgcaaattacattcaattttctctctcttttattttctccataaccaatagtcaatgaaaattgtttttacatcttcctat 50651062  T
Q  395 aaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    |||||||||| |||||||||||||||||| |||| |||||||||||||||||||||||||||||||| |||||    
T  50651061 aaaactttttgcaaagaaaacacaaaaaactatatttcaaattcttatgttttagttttcttaataagtgtga 50650989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 294 - 467
Target Start/End: Complemental strand, 14752333 - 14752160
Alignment:
Q  294 tttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatccta 393  Q
    |||||||||||| ||||||||| |||||||||||||||||||| ||||||||       ||||| ||||||||||||||||||||||||||||| |||||    
T  14752333 tttattctcataaaattaaatgcaaattacattcaattttctctctctttcattttttccataaccaatagtcaatgaaaattgtttttacatcttccta 14752234  T
Q  394 taaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    ||||  ||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| |||||    
T  14752233 taaatttttttccaaagaaaacacaaaaaattatactccaaattcttatgttttagttttctaaataagtgtga 14752160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 295 - 467
Target Start/End: Complemental strand, 37042541 - 37042369
Alignment:
Q  295 ttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcctat 394  Q
    ||||||||||| ||||||||| ||||||||||||||||||||  |||||||       |||||||||||| |||||||||||||||||||||| ||||||    
T  37042541 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataatcaatagccaatgaaaattgtttttacatcttcctat 37042442  T
Q  395 aaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    |||||||||| ||| |||||||||||||| |||||| |||||| ||||||||||||||||||||||| |||||    
T  37042441 aaaactttttccaacgaaaacacaaaaaactatactccaaatttttatgttttagttttcttaataagtgtga 37042369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 293 - 467
Target Start/End: Complemental strand, 7866609 - 7866435
Alignment:
Q  293 gtttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcct 392  Q
    ||||||||||||| |||||||||||||||||||||||||||||  |||||| |       ||||| ||||||||||||||||||||||||||||| || |    
T  7866609 gtttattctcataaaattaaatgaaaattacattcaattttctatctcttttattttttccataaccaatagtcaatgaaaattgtttttacatcttctt 7866510  T
Q  393 ataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    |||||||||||||||||||||| | |||||| ||||||  ||||||||||||||||||||||||||||| |||||    
T  7866509 ataaaacttttttcaaagaaaataaaaaaaactatactctaaattcttatgttttagttttcttaataagtgtga 7866435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 293 - 467
Target Start/End: Complemental strand, 54465021 - 54464848
Alignment:
Q  293 gtttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcct 392  Q
    ||||||||||||| ||||||| | |||||||||||||||||||| ||||||||       ||||| |||||| ||| |||||||||||||||||| ||||    
T  54465021 gtttattctcataaaattaaacgcaaattacattcaattttctctctctttcactttttccataaccaatagccaacgaaaattgtttttacatcttcct 54464922  T
Q  393 ataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    ||||   |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54464921 ataattttttttt-aaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 54464848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 227 - 461
Target Start/End: Complemental strand, 23311785 - 23311551
Alignment:
Q  227 cacattttctttgtcccaaaatataagnnnnnnngacaaacttttatctttttcaatannnnnnnngtttattctcatagaattaaatgaaaattacatt 326  Q
    |||||||||||||||||||||||||||       | |||||||||||||||||||| |          ||||||||||| ||||||||| | ||||||||    
T  23311785 cacattttctttgtcccaaaatataagcaaaaaagtcaaacttttatctttttcaagatttttttttgttattctcataaaattaaatgtatattacatt 23311686  T
Q  327 caattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaatta 426  Q
    ||||||||||  |||||||       ||||| |||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| ||    
T  23311685 caattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaacttttttcaaagaaaacacacaaaacta 23311586  T
Q  427 tacttcaaattcttatgttttagttttcttaataa 461  Q
    ||||  ||||| |||||||||||||||||||||||    
T  23311585 tactctaaatttttatgttttagttttcttaataa 23311551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 194 - 461
Target Start/End: Complemental strand, 11054533 - 11054269
Alignment:
Q  194 tactccctccgtctcataatataagtnnnnnnncacattttctttgtcccaaaatataagnnnnnnngacaaacttttatctttttcaatannnnnnnng 293  Q
    ||||||||||||| |||||||||||        |||||||||||||||||||||||||||       |||||||||||||||||| ||| |             
T  11054533 tactccctccgtcccataatataagccaaaaaacacattttctttgtcccaaaatataagcaaaaaagacaaacttttatcttttccaagattttttttt 11054434  T
Q  294 tttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatccta 393  Q
     ||||||||||| ||||||||| ||||||||||||||||||||    |||||       ||||| |||||| |||||||||||||||||| ||| |||||    
T  11054433 gttattctcataaaattaaatgcaaattacattcaattttctc----tttcattttttccataaccaatagccaatgaaaattgtttttaaatcttccta 11054338  T
Q  394 taaaacttttttc-aaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataa 461  Q
    ||||||||||||| ||||||||||||||||| |||||| ||||||||||| ||||||||||||||||||    
T  11054337 taaaacttttttccaaagaaaacacaaaaaactatactccaaattcttatattttagttttcttaataa 11054269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 293 - 467
Target Start/End: Complemental strand, 46711783 - 46711610
Alignment:
Q  293 gtttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcct 392  Q
    ||||||| ||||| ||||||||  ||||||||||||| |||||| ||||||||       ||||| |||||| ||||||| |||||||||||||| ||||    
T  46711783 gtttattttcataaaattaaatacaaattacattcaaatttctctctctttcatttttt-cataaccaatagccaatgaatattgtttttacatcttcct 46711685  T
Q  393 ataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| |||||    
T  46711684 ataaaacttttttcaaagaaaacacaaaaaattatactccaaattcttatgttttcgttttcttaataagtgtga 46711610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 227 - 467
Target Start/End: Original strand, 36546474 - 36546714
Alignment:
Q  227 cacattttctttgtcccaaaatataagnnnnnnngacaaacttttatctttttcaatannnnnnnngtttattctcatagaattaaatgaaaattacatt 326  Q
    |||||||||||||||||||||||||||       ||||||||||| |||||||||| |        ||||||||||||| ||||||||| ||||||||||    
T  36546474 cacattttctttgtcccaaaatataagcaaaaaagacaaacttttgtctttttcaagattctttttgtttattctcataaaattaaatgcaaattacatt 36546573  T
Q  327 caattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaatta 426  Q
     |||| |||| ||||||||        |||| |||||| |||||||||||| ||||||||| |||||| ||||||||| ||||||||| |||||||| ||    
T  36546574 aaattctctctctctttcattttttctataaccaatagccaatgaaaattggttttacatcttcctatgaaactttttccaaagaaaatacaaaaaacta 36546673  T
Q  427 tacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    ||||  ||||| ||||||||||||||||||||||| |||||    
T  36546674 tactctaaatttttatgttttagttttcttaataagtgtga 36546714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 227 - 467
Target Start/End: Complemental strand, 36561841 - 36561601
Alignment:
Q  227 cacattttctttgtcccaaaatataagnnnnnnngacaaacttttatctttttcaatannnnnnnngtttattctcatagaattaaatgaaaattacatt 326  Q
    |||||||||||||||||||||||||||       ||||||||||| |||||||||| |        ||||||||||||| ||||||||| ||||||||||    
T  36561841 cacattttctttgtcccaaaatataagcaaaaaagacaaacttttgtctttttcaagattctttttgtttattctcataaaattaaatgcaaattacatt 36561742  T
Q  327 caattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaatta 426  Q
     |||| |||| ||||||||        |||| |||||| |||||||||||| ||||||||| |||||| ||||||||| ||||||||| |||||||| ||    
T  36561741 aaattctctctctctttcattttttctataaccaatagccaatgaaaattggttttacatcttcctatgaaactttttccaaagaaaatacaaaaaacta 36561642  T
Q  427 tacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    ||||  ||||| ||||||||||||||||||||||| |||||    
T  36561641 tactctaaatttttatgttttagttttcttaataagtgtga 36561601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 293 - 461
Target Start/End: Original strand, 37074956 - 37075126
Alignment:
Q  293 gtttattctcatagaattaaatgaaaattacattcaattttctccctcttt--cannnnnnncataatcaatagtcaatgaaaattgtttttacatcatc 390  Q
    ||||||||||||| ||||||||| ||||||||||||||||| || ||||||  ||        |||| |||||| ||||||||||||| |||||||| ||    
T  37074956 gtttattctcataaaattaaatgcaaattacattcaattttatcgctctttttcattttttctataaccaatagccaatgaaaattgtgtttacatcttc 37075055  T
Q  391 ctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataa 461  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  37075056 ctataaaactttttccaaagaaaacacaaaaaattatacttcaaattcttatgttttagtttttttaataa 37075126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 293 - 467
Target Start/End: Original strand, 6075079 - 6075253
Alignment:
Q  293 gtttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcct 392  Q
    ||||||||||||| ||||||||| |||||||||||||||||||| ||||||||       ||||| |||| | ||||||||||||||||||| || ||||    
T  6075079 gtttattctcataaaattaaatgcaaattacattcaattttctctctctttcattttttgcataaccaatggccaatgaaaattgtttttacttcttcct 6075178  T
Q  393 ataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
     ||| ||||||| ||||||||||||||||||||||||| |||||||||||  ||||||||||||||||| |||||    
T  6075179 gtaacactttttccaaagaaaacacaaaaaattatactccaaattcttatactttagttttcttaataagtgtga 6075253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 293 - 467
Target Start/End: Original strand, 28875404 - 28875578
Alignment:
Q  293 gtttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcct 392  Q
    ||||||||||||| ||||||||  |||||||||||||||||||   |||||||       ||||| |||||| |||||||||||||||||||||| || |    
T  28875404 gtttattctcataaaattaaatacaaattacattcaattttctttttctttcattttctccataaccaatagccaatgaaaattgtttttacatcttctt 28875503  T
Q  393 ataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    |||||||||||| ||||||||||||||| || |||| | |||||||||||| |||||||||||||||||||||||    
T  28875504 ataaaactttttccaaagaaaacacaaataactatagtccaaattcttatgctttagttttcttaataaatgtga 28875578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 293 - 467
Target Start/End: Original strand, 35963150 - 35963324
Alignment:
Q  293 gtttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcct 392  Q
    ||||||||||||| ||||||||| ||||| |||| ||||||||| ||||||||       ||||| |||||  |||| |||||||||||| |||| ||||    
T  35963150 gtttattctcataaaattaaatgcaaattgcatttaattttctctctctttcattttctccataaccaataaccaataaaaattgtttttccatcttcct 35963249  T
Q  393 ataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    |||||||||||| |||| ||||||||||||| |||||| |||||||||||||||||||||||||||||| |||||    
T  35963250 ataaaactttttccaaacaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgtga 35963324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 295 - 467
Target Start/End: Original strand, 30189570 - 30189743
Alignment:
Q  295 ttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnnc-ataatcaatagtcaatgaaaattgtttttacatcatccta 393  Q
    |||||||| || ||||||||| |||||||||||||| |||||  |||||||       | |||| |||||| |||||||||||||||||||||| |||||    
T  30189570 ttattctcgtaaaattaaatgtaaattacattcaatattctctttctttcatttttttccataaccaatagccaatgaaaattgtttttacatcttccta 30189669  T
Q  394 taaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    |||||||||||||||||||||||||||||| |||||| ||||||||||||||||| |||| ||||||| |||||    
T  30189670 taaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatgttttaatttttttaataagtgtga 30189743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 293 - 467
Target Start/End: Complemental strand, 579264 - 579097
Alignment:
Q  293 gtttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcct 392  Q
    ||||| ||||||| ||||||||| |||||||||||||||||||| ||||||||       ||||| |||||| |||||||||||||||||| ||| ||||    
T  579264 gtttaatctcataaaattaaatgcaaattacattcaattttctctctctttcattttttccataaccaatagccaatgaaaattgtttttatatcttcct 579165  T
Q  393 ataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    |||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||| |||||    
T  579164 ataaaacttttttcaaagaaaacacaaaaaa-------ccaaattcttatgttttagttttcttaataagtgtga 579097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 293 - 441
Target Start/End: Original strand, 6438081 - 6438229
Alignment:
Q  293 gtttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcct 392  Q
    ||||||||||||| ||||||||| |||||||||| |||||| || ||||||||       ||||| |||||| |||||||||||||||||||||| ||||    
T  6438081 gtttattctcataaaattaaatgcaaattacatttaattttatctctctttcattttctccataaccaatagccaatgaaaattgtttttacatcttcct 6438180  T
Q  393 ataaaacttttttcaaagaaaacacaaaaaattatacttcaaattctta 441  Q
    ||||| ||||||||||||||||||||||||| |||||| ||||||||||    
T  6438181 ataaagcttttttcaaagaaaacacaaaaaactatactccaaattctta 6438229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 293 - 467
Target Start/End: Original strand, 50730107 - 50730281
Alignment:
Q  293 gtttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcct 392  Q
    |||||||||| || ||||||||| |||||||||||||||||||| || ||| |       ||||| |||||||||||||   || |||||||||| ||||    
T  50730107 gtttattctcttaaaattaaatgtaaattacattcaattttctctcttttttattttttccataaccaatagtcaatgattttt-tttttacatcttcct 50730205  T
Q  393 ataaaacttttttcaaagaaaacacaaaaaat-tatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    |||||||||||| |||||||| |||||||||  |||||| ||||||||||||||||||||||||||||||||||||    
T  50730206 ataaaactttttccaaagaaagcacaaaaaaactatactccaaattcttatgttttagttttcttaataaatgtga 50730281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 293 - 467
Target Start/End: Complemental strand, 50782747 - 50782573
Alignment:
Q  293 gtttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcct 392  Q
    |||||||||| || ||||||||| |||||||||||||||||||| || ||| |       ||||| |||||||||||||   || |||||||||| ||||    
T  50782747 gtttattctcttaaaattaaatgtaaattacattcaattttctctcttttttattttttccataaccaatagtcaatgattttt-tttttacatcttcct 50782649  T
Q  393 ataaaacttttttcaaagaaaacacaaaaaat-tatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    |||||||||||| |||||||| |||||||||  |||||| ||||||||||||||||||||||||||||||||||||    
T  50782648 ataaaactttttccaaagaaagcacaaaaaaactatactccaaattcttatgttttagttttcttaataaatgtga 50782573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 360 - 500
Target Start/End: Original strand, 9264616 - 9264756
Alignment:
Q  360 aatagtcaatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaat 459  Q
    ||||| |||||||||||||||||||||| || |||||||||||||||||||||||||||||||| ||||||  |||||| ||||||||||||||||||||    
T  9264616 aatagccaatgaaaattgtttttacatcttcatataaaacttttttcaaagaaaacacaaaaaactatactcaaaattcatatgttttagttttcttaat 9264715  T
Q  460 aaatgtgannnnnnnngcttataatttaggacggagggagt 500  Q
    || |||||         |||||||||| |||||||||||||    
T  9264716 aagtgtgatttttttttcttataatttgggacggagggagt 9264756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 293 - 466
Target Start/End: Original strand, 19464073 - 19464248
Alignment:
Q  293 gtttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcct 392  Q
    ||||||||||||| | | ||||| ||||||||||||| ||| || ||||||||       ||||| ||||| | ||||||||||||||||  ||| ||||    
T  19464073 gtttattctcataaactgaaatgcaaattacattcaactttttctctctttcatttttcccataaccaataataaatgaaaattgtttttcaatcttcct 19464172  T
Q  393 ataaaacttttttcaaagaaaacacaaaaaa--ttatacttcaaattcttatgttttagttttcttaataaatgtg 466  Q
    |||||||||||||||||||||||||||||||   |||||| |||||||||||||||||||||| ||||||| ||||    
T  19464173 ataaaacttttttcaaagaaaacacaaaaaactatatactccaaattcttatgttttagttttgttaataagtgtg 19464248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 294 - 461
Target Start/End: Complemental strand, 26725116 - 26724949
Alignment:
Q  294 tttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatccta 393  Q
    |||||||||||  ||||| ||| |||||||||||| |||| || |||||  |       |||||||||||  |||||||||||||||||||||| ||  |    
T  26725116 tttattctcatgaaattatatgcaaattacattcagttttatctctcttctattttctccataatcaataaccaatgaaaattgtttttacatcttctca 26725017  T
Q  394 taaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataa 461  Q
     ||||||| || ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  26725016 gaaaacttattccaaagaaaacacaaaaaattatacttcaaattcttatattttagttttcttaataa 26724949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 227 - 467
Target Start/End: Complemental strand, 23910687 - 23910465
Alignment:
Q  227 cacattttctttgtcccaaaatataagnnnnnnngacaaacttttatctttttcaatannnnnnnngtttattctcatagaattaaatgaaaattacatt 326  Q
    |||||||| ||||||||||||||||||       |||||| ||||||||||||||| |        ||||||||||||| ||||||||| ||||||||||    
T  23910687 cacattttttttgtcccaaaatataagcaaaaaagacaaatttttatctttttcaagattttttttgtttattctcatataattaaatgcaaattacatt 23910588  T
Q  327 caattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaatta 426  Q
    ||||||||                  ||||| |||||| ||||||||||| |||||||||| |||||||||||||||| |||||||||||||||||  ||    
T  23910587 caattttc------------------cataaccaatagccaatgaaaattatttttacatcttcctataaaactttttacaaagaaaacacaaaaagcta 23910506  T
Q  427 tacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    ||||  |||||||||||||||| |||||||||||| |||||    
T  23910505 tactctaaattcttatgttttaattttcttaataagtgtga 23910465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 359 - 467
Target Start/End: Original strand, 31836983 - 31837091
Alignment:
Q  359 caatagtcaatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaa 458  Q
    |||||||||||||||||||||||| |||  |||||||||||||||| ||||||||| |||||||| |||||| ||| |||||||||||||||||||||||    
T  31836983 caatagtcaatgaaaattgtttttgcatattcctataaaactttttccaaagaaaatacaaaaaactatactccaacttcttatgttttagttttcttaa 31837082  T
Q  459 taaatgtga 467  Q
    ||| |||||    
T  31837083 taagtgtga 31837091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 293 - 459
Target Start/End: Original strand, 53270231 - 53270398
Alignment:
Q  293 gtttattctcatagaattaaatgaaaattacattcaattttct--ccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatc 390  Q
    ||||||||||||| ||||||||  |||||||||||||||||||  | ||||||||       ||||| |||||| ||||||||||| ||||| |||| |     
T  53270231 gtttattctcataaaattaaatacaaattacattcaattttctttctctctttcattttttccataaccaataggcaatgaaaattattttttcatcttt 53270330  T
Q  391 ctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaat 459  Q
    |||| |||||||||||||||||||||||||||| |||||| |||||||||||| |||| ||||||||||    
T  53270331 ctatgaaacttttttcaaagaaaacacaaaaaactatactccaaattcttatg-tttaattttcttaat 53270398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 295 - 467
Target Start/End: Original strand, 2927289 - 2927462
Alignment:
Q  295 ttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcctat 394  Q
    ||||||||||  ||||||||  |||||||||| ||||||||| |||||  |       ||||| |||||| ||||||||||| |||||||||| ||| ||    
T  2927289 ttattctcatgaaattaaatacaaattacatttaattttctctctcttctatttttttcataaccaatagccaatgaaaattatttttacatcttcccat 2927388  T
Q  395 aaaacttttttcaaagaaaacac-aaaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    ||||||| || ||||||||| || |||||| ||| || ||||||||||||||||||||||||||||||||||||    
T  2927389 aaaacttattccaaagaaaatacaaaaaaactatgctacaaattcttatgttttagttttcttaataaatgtga 2927462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 366 - 467
Target Start/End: Complemental strand, 41476389 - 41476287
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatg-ttttagttttcttaataaatg 464  Q
    ||||||||||| |||||||||| | ||||||||||||||||||||||||||||||||| |||||| |||||| ||||| |||||||||||||||||| ||    
T  41476389 caatgaaaattatttttacatctttctataaaacttttttcaaagaaaacacaaaaaactatactccaaatttttatgtttttagttttcttaataagtg 41476290  T
Q  465 tga 467  Q
    |||    
T  41476289 tga 41476287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 293 - 467
Target Start/End: Original strand, 8703107 - 8703277
Alignment:
Q  293 gtttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcct 392  Q
    ||||||||||||| ||||||||| |||||||||| ||||||||  ||||||||       |||||||||||| |||||||| ||||||||||||| ||||    
T  8703107 gtttattctcataaaattaaatgcaaattacattaaattttctttctctttcatttttc-cataatcaatagccaatgaaa-ttgtttttacatcttcct 8703204  T
Q  393 ataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    |||||  ||||| |||| || ||||||||| | ||||| |||||||||||||||||||||| ||||||| |||||    
T  8703205 ataaatttttttccaaa-aacacacaaaaact-atactccaaattcttatgttttagtttttttaataagtgtga 8703277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 293 - 467
Target Start/End: Original strand, 9054994 - 9055164
Alignment:
Q  293 gtttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcct 392  Q
    ||||||||||||| ||||||||| |||||||||| ||||||||  ||||||||       |||||||||||| |||||||| ||||||||||||| ||||    
T  9054994 gtttattctcataaaattaaatgcaaattacattaaattttctttctctttcatttttc-cataatcaatagccaatgaaa-ttgtttttacatcttcct 9055091  T
Q  393 ataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    |||||  ||||| |||| || ||||||||| | ||||| |||||||||||||||||||||| ||||||| |||||    
T  9055092 ataaatttttttccaaa-aacacacaaaaact-atactccaaattcttatgttttagtttttttaataagtgtga 9055164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 296 - 453
Target Start/End: Complemental strand, 20847391 - 20847235
Alignment:
Q  296 tattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcctata 395  Q
    |||||||||| ||||||||| |||||||||||||||||  | ||||||||       ||||||||||   |||||||||||||||  ||||| ||||||     
T  20847391 tattctcataaaattaaatgcaaattacattcaatttttcctctctttcattttctccataatcaattaccaatgaaaattgtttgcacatcttcctatg 20847292  T
Q  396 aaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagtttt 453  Q
    |||||| || ||||||||||||| ||||||||||| ||||||||||||||||| ||||    
T  20847291 aaacttattccaaagaaaacaca-aaaattatactccaaattcttatgttttaatttt 20847235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 293 - 461
Target Start/End: Complemental strand, 32619956 - 32619787
Alignment:
Q  293 gtttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcct 392  Q
    ||||||||| ||| ||||||||| |||||||||||||||||||| || |  ||       ||||| |||||| ||||||||||| |||||||||| || |    
T  32619956 gtttattctaataaaattaaatgcaaattacattcaattttctctctatcccaatttctccataaccaatagccaatgaaaattatttttacatcttctt 32619857  T
Q  393 ataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgtt-ttagttttcttaataa 461  Q
    ||||||| | || |||||||||||||||| |||||||| |||||||| |||||  |||||||||||||||    
T  32619856 ataaaacctattccaaagaaaacacaaaatattatactccaaattctcatgttcatagttttcttaataa 32619787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 353 - 467
Target Start/End: Original strand, 29235245 - 29235359
Alignment:
Q  353 cataatcaatagtcaatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttt 452  Q
    ||||| |||||| ||||||||||| |||||||||| |||||| |||| ||||  |||||||| |||||||| ||||||  ||||||||||||||||||||    
T  29235245 cataaccaatagccaatgaaaattatttttacatcttcctattaaacgttttctaaagaaaatacaaaaaactatactctaaattcttatgttttagttt 29235344  T
Q  453 tcttaataaatgtga 467  Q
    ||||||||| |||||    
T  29235345 tcttaataagtgtga 29235359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 295 - 467
Target Start/End: Original strand, 26208014 - 26208186
Alignment:
Q  295 ttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcctat 394  Q
    ||||||||||| | | |||||  |||||||||||||||||||  |||| ||       || ||| ||||| |||||||||||||||||||||| | | ||    
T  26208014 ttattctcataaattcaaatgccaattacattcaattttctctttcttccattttctccacaataaatagccaatgaaaattgtttttacatcttaccat 26208113  T
Q  395 aaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
     |||||| || || | ||||||||||||| ||||||  ||||||||||||||||||||||||||||| |||||    
T  26208114 gaaacttattccagacaaaacacaaaaaactatactctaaattcttatgttttagttttcttaataagtgtga 26208186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 366 - 467
Target Start/End: Original strand, 10114976 - 10115077
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgt 465  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||| || ||||||||||||  | |||| |  |||||||||||||||||||||| |||    
T  10114976 caatgaaaattgtttttacatcttcctataaaacttatttcaaagataatacaaaaaattatgttacaaactactatgttttagttttcttaataagtgt 10115075  T
Q  466 ga 467  Q
    ||    
T  10115076 ga 10115077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 366 - 467
Target Start/End: Original strand, 10014334 - 10014435
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgt 465  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||| || ||||| ||||||  | |||| |  |||||||||||||||||||||| |||    
T  10014334 caatgaaaattgtttttacatcttcctataaaacttatttcaaagataatacaaacaattatgttacaaactactatgttttagttttcttaataagtgt 10014433  T
Q  466 ga 467  Q
    ||    
T  10014434 ga 10014435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 366 - 467
Target Start/End: Original strand, 10252076 - 10252177
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgt 465  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||| || ||||| ||||||  | |||| |  |||||||||||||||||||||| |||    
T  10252076 caatgaaaattgtttttacatcttcctataaaacttatttcaaagataatacaaacaattatgttacaaactactatgttttagttttcttaataagtgt 10252175  T
Q  466 ga 467  Q
    ||    
T  10252176 ga 10252177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 366 - 461
Target Start/End: Complemental strand, 22479107 - 22479012
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataa 461  Q
    ||||||||| |||||||||||| ||||||||||||| ||||||||| ||||||||||| |||  | |||| |  ||||||||||||||||||||||    
T  22479107 caatgaaaagtgtttttacatcttcctataaaacttatttcaaagataacacaaaaaactatgttacaaactactatgttttagttttcttaataa 22479012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 353 - 467
Target Start/End: Original strand, 47115907 - 47116021
Alignment:
Q  353 cataatcaatagtcaatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttt 452  Q
    |||||||||||  ||| |||||||| ||||||||| | | |||||| || ||  |||  |||||||||||||||||||  ||||||||||||||||||||    
T  47115907 cataatcaataaccaaagaaaattgcttttacatctttccataaaatttattctaaaacaaacacaaaaaattatactctaaattcttatgttttagttt 47116006  T
Q  453 tcttaataaatgtga 467  Q
    | |||||||||||||    
T  47116007 ttttaataaatgtga 47116021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 356 - 467
Target Start/End: Complemental strand, 33973630 - 33973518
Alignment:
Q  356 aatcaatagtcaatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaa-aaaattatacttcaaattcttatgttttagttttc 454  Q
    ||||||||| || |||||||| |||| || || | ||||||||||||||| ||||||||||||| |||| |||||| |||||| |||| ||||||||||     
T  33973630 aatcaatagccactgaaaattattttgacgtctttctataaaactttttttaaagaaaacacaaaaaaactatactccaaatttttatattttagttttg 33973531  T
Q  455 ttaataaatgtga 467  Q
    ||||||| |||||    
T  33973530 ttaataagtgtga 33973518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 307 - 467
Target Start/End: Complemental strand, 8097130 - 8096970
Alignment:
Q  307 aattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcctataaaacttttttc 406  Q
    ||||||||| ||| | |||||||||| ||| ||||||||        |||| |||||  ||||||||||| |||||||||| ||||||||||||| ||||    
T  8097130 aattaaatgcaaagtgcattcaatttgctctctctttcattttctcaataagcaataaccaatgaaaattatttttacatcttcctataaaacttatttc 8097031  T
Q  407 aaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    || || ||||||| ||| |||  | |||| |  |||||||||||||||||||||| |||||    
T  8097030 aaggataacacaagaaactatgttgcaaactactatgttttagttttcttaataagtgtga 8096970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 366 - 467
Target Start/End: Original strand, 31126276 - 31126377
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgt 465  Q
    ||||||||||| |||||||||| | | ||||||||| |||||| || ||||||||||||||||| ||||||   || || |||||||||||||||| |||    
T  31126276 caatgaaaattatttttacatctttccataaaacttatttcaaggagaacacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgt 31126375  T
Q  466 ga 467  Q
    ||    
T  31126376 ga 31126377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 369 - 466
Target Start/End: Complemental strand, 47444023 - 47443927
Alignment:
Q  369 tgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtg 466  Q
    ||||||||||||||||||| || ||||||| || ||||||||| ||||||||||| |||  | |||| |  |||||||||||||||||||||||||||    
T  47444023 tgaaaattgtttttacatcttc-tataaaatttatttcaaagataacacaaaaaactatgttacaaactaatatgttttagttttcttaataaatgtg 47443927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 366 - 458
Target Start/End: Complemental strand, 3084233 - 3084141
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaa 458  Q
    ||||||| |||||||||||||| ||| ||||||||  ||| || ||  |||||| ||||||||||||||||||| || |||||||||||||||    
T  3084233 caatgaatattgtttttacatcttcccataaaactaattttaaggaggacacaagaaattatacttcaaattctcatattttagttttcttaa 3084141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 300 - 401
Target Start/End: Complemental strand, 34722724 - 34722623
Alignment:
Q  300 ctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcctataaaac 399  Q
    |||||| ||||||||| |||||||||||||||||||| |  |||||       ||||| |||||| |||||||||||||||||||||| || ||||||||    
T  34722724 ctcataaaattaaatgtaaattacattcaattttctctccttttcattttttgcataaccaatagccaatgaaaattgtttttacatcttcttataaaac 34722625  T
Q  400 tt 401  Q
    ||    
T  34722624 tt 34722623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 295 - 423
Target Start/End: Original strand, 3972275 - 3972402
Alignment:
Q  295 ttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcctat 394  Q
    ||||||||||  ||||||||| ||||||||||||||||  || ||||| ||       | ||| ||||||  ||||||||||||||||||||| ||| ||    
T  3972275 ttattctcatgaaattaaatgcaaattacattcaatttgttctctcttccattttcttcctaaccaatagctaatgaaaattgtttttacatcttcccat 3972374  T
Q  395 aaaacttttttcaaagaaaacacaaaaaa 423  Q
    ||||| || ||||||||||||||||||||    
T  3972375 aaaac-ttattcaaagaaaacacaaaaaa 3972402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 295 - 423
Target Start/End: Complemental strand, 3997603 - 3997476
Alignment:
Q  295 ttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcctat 394  Q
    ||||||||||  ||||||||| ||||||||||||||||  || ||||| ||       | ||| ||||||  ||||||||||||||||||||| ||| ||    
T  3997603 ttattctcatgaaattaaatgcaaattacattcaatttgttctctcttccattttcttcctaaccaatagctaatgaaaattgtttttacatcttcccat 3997504  T
Q  395 aaaacttttttcaaagaaaacacaaaaaa 423  Q
    ||||| || ||||||||||||||||||||    
T  3997503 aaaac-ttattcaaagaaaacacaaaaaa 3997476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 366 - 460
Target Start/End: Complemental strand, 22456061 - 22455967
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaata 460  Q
    |||| ||||||||||||| ||| ||||||||||||| ||||||||  ||||||||||| |||  | |||| |  |||||||||||||||||||||    
T  22456061 caatcaaaattgtttttatatcttcctataaaacttatttcaaagttaacacaaaaaactatgttacaaactactatgttttagttttcttaata 22455967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 295 - 386
Target Start/End: Complemental strand, 47867036 - 47866946
Alignment:
Q  295 ttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacat 386  Q
    ||||||||||| ||||||||| |||||||||||||||||||| ||||| ||       |||||||||||| |||||||||| ||||||||||    
T  47867036 ttattctcata-aattaaatgcaaattacattcaattttctctctcttccactttctccataatcaatagccaatgaaaatggtttttacat 47866946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 370 - 467
Target Start/End: Complemental strand, 25242227 - 25242130
Alignment:
Q  370 gaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    ||||||||||||| |||| | ||||||||||| ||| ||||| ||||||||||| |||  | |||| |  |||||||||||||||||||||| |||||    
T  25242227 gaaaattgttttttcatctttctataaaacttattttaaagataacacaaaaaactatgttacaaactactatgttttagttttcttaataagtgtga 25242130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 366 - 467
Target Start/End: Original strand, 34022663 - 34022764
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgt 465  Q
    |||||| |||| |||||||||| | | ||||||||| |||||| || ||||||||||||||||| ||||||   || || |||||||||||||||| |||    
T  34022663 caatgagaattatttttacatctttccataaaacttatttcaaggagaacacaaaaaattatacctcaaatcactaagtattagttttcttaataagtgt 34022762  T
Q  466 ga 467  Q
    ||    
T  34022763 ga 34022764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 375 - 463
Target Start/End: Original strand, 17587779 - 17587867
Alignment:
Q  375 ttgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaat 463  Q
    ||||||||||||| ||||||||||||| ||||||  | |||| || ||| |||| | ||||||  ||||||||||||||||||||||||    
T  17587779 ttgtttttacatcttcctataaaacttatttcaagaataacaaaagaaactatattgcaaattactatgttttagttttcttaataaat 17587867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 367 - 467
Target Start/End: Original strand, 21654310 - 21654410
Alignment:
Q  367 aatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtg 466  Q
    |||||||||| |||||||||| | | || |||||| |||||| || ||||||||||||||||| ||||||   || || |||||||||||||||| ||||    
T  21654310 aatgaaaattatttttacatctttccatgaaacttatttcaaggagaacacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgtg 21654409  T
Q  467 a 467  Q
    |    
T  21654410 a 21654410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 366 - 467
Target Start/End: Original strand, 38401445 - 38401550
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattata----cttcaaattcttatgttttagttttcttaataa 461  Q
    ||||||||||| ||||||||||  |||||||||||| ||||||||| ||||||||||| ||||     | |||| |  ||||||||||||||||||||||    
T  38401445 caatgaaaattatttttacatctccctataaaacttatttcaaagataacacaaaaaactatatatgttacaaactactatgttttagttttcttaataa 38401544  T
Q  462 atgtga 467  Q
     |||||    
T  38401545 gtgtga 38401550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 307 - 384
Target Start/End: Original strand, 38674882 - 38674959
Alignment:
Q  307 aattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttac 384  Q
    ||||||||  |||||| ||||||||||||| ||||||||       ||||||||||||||||||||||||||||||||    
T  38674882 aattaaatacaaattagattcaattttctctctctttcattttcttcataatcaatagtcaatgaaaattgtttttac 38674959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 353 - 467
Target Start/End: Complemental strand, 8769643 - 8769531
Alignment:
Q  353 cataatcaatagtcaatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttt 452  Q
    |||||||| ||| |||| |||||| |||||||| | ||| || || ||||||  ||| ||||||| ||||| |||||| | |||| ||||||||||||||    
T  8769643 cataatcattagccaataaaaattatttttacaacttcccatgaatcttttt--aaaaaaaacaccaaaaactatactcctaattgttatgttttagttt 8769546  T
Q  453 tcttaataaatgtga 467  Q
    ||||||||| |||||    
T  8769545 tcttaataagtgtga 8769531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 366 - 419
Target Start/End: Complemental strand, 16033040 - 16032987
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaa 419  Q
    |||||||||||||||||||||| ||||||||||||| |||||| || |||||||    
T  16033040 caatgaaaattgtttttacatcttcctataaaacttatttcaaggataacacaa 16032987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 366 - 423
Target Start/End: Original strand, 21214306 - 21214363
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaa 423  Q
    |||||||||||||||||||||| | ||||||||||| ||||||| | |||||||||||    
T  21214306 caatgaaaattgtttttacatctttctataaaacttatttcaaaaataacacaaaaaa 21214363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 366 - 467
Target Start/End: Original strand, 31292676 - 31292777
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgt 465  Q
    |||||||||||||||||||||| ||| ||| ||||  || ||| || |||| || |||||||||||||||||   ||||||||||||| | ||||| |||    
T  31292676 caatgaaaattgtttttacatcttcccatagaactaattccaaggagaacaaaagaaattatacttcaaattaccatgttttagttttttcaataagtgt 31292775  T
Q  466 ga 467  Q
    ||    
T  31292776 ga 31292777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 366 - 467
Target Start/End: Original strand, 34194953 - 34195054
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgt 465  Q
    |||||||||||||||||||||| ||||||||||||| |||||  |  || |||| ||| |||  | |||| |  |||||||||||||||||||||| |||    
T  34194953 caatgaaaattgtttttacatcttcctataaaacttatttcatgggtaagacaagaaactatgttgcaaactactatgttttagttttcttaataagtgt 34195052  T
Q  466 ga 467  Q
    ||    
T  34195053 ga 34195054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 366 - 467
Target Start/End: Original strand, 55400802 - 55400903
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgt 465  Q
    |||||| |||| |||||||||| | | || |||||| || |||||| ||||||||||||||||| ||||||   || || |||||||||||||||| |||    
T  55400802 caatgagaattatttttacatctttccatgaaacttattccaaagagaacacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgt 55400901  T
Q  466 ga 467  Q
    ||    
T  55400902 ga 55400903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 293 - 345
Target Start/End: Complemental strand, 48802606 - 48802554
Alignment:
Q  293 gtttattctcatagaattaaatgaaaattacattcaattttctccctctttca 345  Q
    ||||||||||||| || |||||| |||||||||||||||||||| ||||||||    
T  48802606 gtttattctcataaaagtaaatgcaaattacattcaattttctctctctttca 48802554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 353 - 467
Target Start/End: Complemental strand, 8764743 - 8764631
Alignment:
Q  353 cataatcaatagtcaatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttt 452  Q
    |||||||| ||| |||| |||||| |||||||| | ||| || ||  |||||| ||| ||||||||||||  |||||| | |||| ||||||||||||||    
T  8764743 cataatcattagccaataaaaattatttttacaacttcccatgaa--tttttttaaaaaaaacacaaaaagctatactcctaattgttatgttttagttt 8764646  T
Q  453 tcttaataaatgtga 467  Q
    | ||||||| |||||    
T  8764645 ttttaataagtgtga 8764631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 457
Target Start/End: Complemental strand, 30454773 - 30454687
Alignment:
Q  371 aaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttctta 457  Q
    ||||||||||||||||| | ||||||||||| |||||| || ||||||| ||| |||  | |||| |  ||||||||||||||||||    
T  30454773 aaaattgtttttacatctttctataaaacttatttcaaggataacacaagaaactatgttgcaaactactatgttttagttttctta 30454687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 353 - 467
Target Start/End: Original strand, 30612229 - 30612343
Alignment:
Q  353 cataatcaatagtcaatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttt 452  Q
    |||||||| ||  |||||| ||||||||||||||| | |||| |||||  ||| ||||| |||| |||||||||||  | |||||  ||| |||| ||||    
T  30612229 cataatcattaaccaatgagaattgtttttacatctttctatgaaactcattttaaagagaacataaaaaattatatcttaaattactatatttttgttt 30612328  T
Q  453 tcttaataaatgtga 467  Q
    ||||||||| |||||    
T  30612329 tcttaataagtgtga 30612343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 366 - 467
Target Start/End: Complemental strand, 37324140 - 37324038
Alignment:
Q  366 caatgaaaattgtttttacatcatcctat-aaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatg 464  Q
    |||||| |||| |||||||||| | | || ||||||| ||||||||| ||||||||||||||||  ||||||   || || |||||||||||||||| ||    
T  37324140 caatgagaattatttttacatctttccatgaaaacttatttcaaagataacacaaaaaattatatctcaaatcactaagtgttagttttcttaataagtg 37324041  T
Q  465 tga 467  Q
    |||    
T  37324040 tga 37324038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 370 - 467
Target Start/End: Complemental strand, 46557219 - 46557122
Alignment:
Q  370 gaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaat-tatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    ||||||| |||||||||| ||| || |||||| ||  |||||||||||||||||  |||  |  ||||||||||| |||||||||||||||||||||||    
T  46557219 gaaaattatttttacatcttcccatgaaacttattctaaagaaaacacaaaaaaactatgata-aaattcttatgctttagttttcttaataaatgtga 46557122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 373 - 467
Target Start/End: Original strand, 51309484 - 51309578
Alignment:
Q  373 aattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    |||||||| |||||| | |||| |||||| || |||  | ||||||||||||||||| ||||| |  ||||||||  ||||||||||||||||||    
T  51309484 aattgtttatacatctttctatgaaacttattccaagaagaacacaaaaaattatacctcaaactactatgtttttattttcttaataaatgtga 51309578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 367 - 423
Target Start/End: Original strand, 6784390 - 6784446
Alignment:
Q  367 aatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaa 423  Q
    |||||||||| |||||||||| |||||||||| || ||| ||||| |||||||||||    
T  6784390 aatgaaaattatttttacatcttcctataaaatttatttgaaagataacacaaaaaa 6784446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 293 - 345
Target Start/End: Complemental strand, 33974685 - 33974633
Alignment:
Q  293 gtttattctcatagaattaaatgaaaattacattcaattttctccctctttca 345  Q
    ||||||||||||| ||||||||| |||||||||| ||||||||  ||||||||    
T  33974685 gtttattctcataaaattaaatgcaaattacattaaattttctttctctttca 33974633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 367 - 463
Target Start/End: Original strand, 51255251 - 51255347
Alignment:
Q  367 aatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaat 463  Q
    ||||| |||| |||||||||  | | || |||||| |||| | || ||||||||||||||||||||| |||  || || ||||||||||||||||||    
T  51255251 aatgagaattatttttacatatttccatgaaacttatttctaggagaacacaaaaaattatacttcatattactacgtgttagttttcttaataaat 51255347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 295 - 383
Target Start/End: Complemental strand, 46557325 - 46557237
Alignment:
Q  295 ttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgttttta 383  Q
    ||||||||||  ||||||||| |||||||||| ||||||||| ||||||||       |||||  ||||| ||||||||||| ||||||    
T  46557325 ttattctcatgaaattaaatgtaaattacatttaattttctctctctttcattttttccataactaatagccaatgaaaattattttta 46557237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 366 - 401
Target Start/End: Complemental strand, 54725663 - 54725628
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaactt 401  Q
    |||||||||||||||||||||| |||||||||||||    
T  54725663 caatgaaaattgtttttacatcttcctataaaactt 54725628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 293 - 335
Target Start/End: Complemental strand, 41476455 - 41476413
Alignment:
Q  293 gtttattctcatagaattaaatgaaaattacattcaattttct 335  Q
    ||||||||||||| ||||||||| |||||| ||||||||||||    
T  41476455 gtttattctcataaaattaaatgcaaattagattcaattttct 41476413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 413 - 463
Target Start/End: Original strand, 46303689 - 46303739
Alignment:
Q  413 aacacaaaaaattatacttcaaattcttatgttttagttttcttaataaat 463  Q
    |||| ||||||||||| || |||||  ||||||||||||||||||||||||    
T  46303689 aacataaaaaattatattttaaattactatgttttagttttcttaataaat 46303739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 397 - 467
Target Start/End: Original strand, 46580630 - 46580700
Alignment:
Q  397 aacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    ||||| |||||| || ||||||||||||||||| ||||||   || || |||||||||||||||| |||||    
T  46580630 aacttatttcaaggagaacacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgtga 46580700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 366 - 467
Target Start/End: Original strand, 28793226 - 28793327
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgt 465  Q
    |||||| |||| |||||||||| | | || ||| || || ||| || ||||||||||||||||| ||||||   || || |||||||||||||||| |||    
T  28793226 caatgagaattatttttacatctttccatgaaatttattccaaggataacacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgt 28793325  T
Q  466 ga 467  Q
    ||    
T  28793326 ga 28793327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 366 - 467
Target Start/End: Complemental strand, 36189062 - 36188961
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgt 465  Q
    |||||| ||||| |||||| || | | || |||||| |||||| || || |||||||| ||||| |||||||  | |||||||| ||||||||||| |||    
T  36189062 caatgagaattggttttacttctttccatgaaacttatttcaaggagaatacaaaaaactatacctcaaattactgtgttttagatttcttaataagtgt 36188963  T
Q  466 ga 467  Q
    ||    
T  36188962 ga 36188961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 366 - 463
Target Start/End: Complemental strand, 45347769 - 45347672
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaat 463  Q
    |||||| |||| |||||||||| | | || |||||| || ||| || |||||||||||| |||| ||||||   || || ||||||||||||||||||    
T  45347769 caatgagaattatttttacatctttccatgaaacttattccaaggagaacacaaaaaatcatacctcaaatcactaagtgttagttttcttaataaat 45347672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 366 - 419
Target Start/End: Complemental strand, 46918266 - 46918213
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaa 419  Q
    |||||||||||||||||| ||| ||||||||||||| ||| || || |||||||    
T  46918266 caatgaaaattgtttttagatcttcctataaaacttattttaaggataacacaa 46918213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 366 - 467
Target Start/End: Original strand, 49068115 - 49068216
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgt 465  Q
    |||||| |||| |||||||||| | | || |||||| |||  | || ||||||||||||||||  ||||||   || || ||||||||||||||||||||    
T  49068115 caatgagaattatttttacatctttccatgaaacttatttataggagaacacaaaaaattatatctcaaatcactaagtgttagttttcttaataaatgt 49068214  T
Q  466 ga 467  Q
    ||    
T  49068215 ga 49068216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 293 - 345
Target Start/End: Original strand, 9264006 - 9264058
Alignment:
Q  293 gtttattctcatagaattaaatgaaaattacattcaattttctccctctttca 345  Q
    ||||||||||||| ||||||||| |||||||||  |||||| || ||||||||    
T  9264006 gtttattctcataaaattaaatgcaaattacatctaattttatctctctttca 9264058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 110; Significance: 3e-55; HSPs: 57)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 227 - 467
Target Start/End: Complemental strand, 6110433 - 6110191
Alignment:
Q  227 cacattttctttgtcccaaaatataagnnnnnnngacaaacttttatctttttcaatannnnnnnngtttattctcatagaattaaatgaaaattacatt 326  Q
    |||||||||||||||||||||||||||       |||||||||||||||||| ||| |        ||||||||||||| ||||||||| ||||||||||    
T  6110433 cacattttctttgtcccaaaatataagcaaaaaagacaaacttttatcttttccaagattttttttgtttattctcataaaattaaatgcaaattacatt 6110334  T
Q  327 caattttctccctct--ttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaat 424  Q
    |||||||||| ||||  ||||       ||||| |||||| |||||||||||||||||||||| |||||||||||||||| | |||||||||||||||      
T  6110333 caattttctctctctctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactttttccgaagaaaacacaaaaagc 6110234  T
Q  425 tatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    |||||| |||||||||||||||||||||||||||||| |||||    
T  6110233 tatactccaaattcttatgttttagttttcttaataagtgtga 6110191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 293 - 467
Target Start/End: Original strand, 19264093 - 19264268
Alignment:
Q  293 gtttattctcatagaattaaatg-aaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcc 391  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||| |||||| |       ||||| |||||| |||||||||||||||||||||| |||    
T  19264093 gtttattctcataaaattaaatgcaaaattacattcaattttctctctctttaattttttccataaccaatagccaatgaaaattgtttttacatcttcc 19264192  T
Q  392 tataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    ||||||||||||| |||||||||||||||||||||||||  ||||||||||||||||||||||||||||| |||||    
T  19264193 tataaaactttttccaaagaaaacacaaaaaattatactctaaattcttatgttttagttttcttaataagtgtga 19264268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 227 - 467
Target Start/End: Original strand, 41528184 - 41528425
Alignment:
Q  227 cacattttctttgtcccaaaatataagnnnnnnngacaaacttttatctttttcaatannnnnnnngtttattctcatagaattaaatgaaaattacatt 326  Q
    |||||||| ||||||||||||||||||       |||||||||||||||||||||| |        ||||||||||||| ||||||||| ||||||||||    
T  41528184 cacattttgtttgtcccaaaatataagcaaaaaagacaaacttttatctttttcaagattttttttgtttattctcataaaattaaatgcaaattacatt 41528283  T
Q  327 caattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaatta 426  Q
    ||||||||||  |||||||       ||||| |||||| |||||||||||||||||||||| ||||||||||    ||||||||||||||||||||| ||    
T  41528284 caattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaaaaaatttcaaagaaaacacaaaaaacta 41528383  T
Q  427 tacttcaaattcttatg-ttttagttttcttaataaatgtga 467  Q
    ||||||||||||||||| ||||| |||||||||||| |||||    
T  41528384 tacttcaaattcttatgtttttaattttcttaataagtgtga 41528425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 230 - 467
Target Start/End: Original strand, 45085188 - 45085425
Alignment:
Q  230 attttctttgtcccaaaatataagnnnnnnngacaaacttttatctttttcaatannnnnnnngtttattctcatagaattaaatgaaaattacattcaa 329  Q
    ||||||||||||||||||||||||       || |||||||||||||||  || |        ||||||||||||| ||||||||| |||||||||||||    
T  45085188 attttctttgtcccaaaatataagcaaaaaagataaacttttatcttttctaagattttttttgtttattctcataaaattaaatgcaaattacattcaa 45085287  T
Q  330 ttttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatac 429  Q
    ||||||| ||||||||       ||||| |||| |  ||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| |||||    
T  45085288 ttttctctctctttcattttttccataaccaatggctaatgaaaattgtttttacatcttcctataaaacttttttcaaagaaaatacaaaaaactatac 45085387  T
Q  430 ttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    | ||||||||||||||||| |||||||||||| |||||    
T  45085388 tccaaattcttatgttttaattttcttaataagtgtga 45085425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 293 - 467
Target Start/End: Original strand, 45660359 - 45660536
Alignment:
Q  293 gtttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcct 392  Q
    ||||||||||||| ||||||||| |||||||||| |||||| || ||||||||       ||||| |||||| |||||||||||||||||||||| ||||    
T  45660359 gtttattctcataaaattaaatgcaaattacatttaattttatctctctttcattttctccataaccaatagccaatgaaaattgtttttacatcttcct 45660458  T
Q  393 ataaaacttttttcaaagaaaacacaaaaaattatacttcaa---attcttatgttttagttttcttaataaatgtga 467  Q
    ||||||||||||||||||||||||||||||| |||||| |||   |||||||||||||||||||||||||||||||||    
T  45660459 ataaaacttttttcaaagaaaacacaaaaaactatactccaaattattcttatgttttagttttcttaataaatgtga 45660536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 293 - 467
Target Start/End: Original strand, 3201320 - 3201494
Alignment:
Q  293 gtttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcct 392  Q
    ||||||||||||| ||||||||| ||||||||||||||||| ||  |||||||       ||||| |||||| |||||||||||||||||||||| | ||    
T  3201320 gtttattctcataaaattaaatgcaaattacattcaattttatctttctttcattttttccataaccaatagccaatgaaaattgtttttacatctttct 3201419  T
Q  393 ataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    |||||||||||| |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| |||||    
T  3201420 ataaaactttttccaaagaaaacacaaaaaactatactttaaattcttatgttttagttttcttaataagtgtga 3201494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 227 - 461
Target Start/End: Complemental strand, 28599381 - 28599146
Alignment:
Q  227 cacattttctttgtcccaaaatataagnnnnnnngacaaacttttatctttttcaatannnnnnnn-gtttattctcatagaattaaatgaaaattacat 325  Q
    ||||||||||||||||||||||||||        |||||||||||||||||| ||| |         ||||||||||||| ||||||||| | |||||||    
T  28599381 cacattttctttgtcccaaaatataatcaaaaaagacaaacttttatcttttccaagatttttttttgtttattctcataaaattaaatgcatattacat 28599282  T
Q  326 tcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaatt 425  Q
    |||||||||||  |||||||       ||||| |||||| ||||||||||| |||||||||| ||||||||| |||||| |||||||||||||||||| |    
T  28599281 tcaattttctctttctttcattttttccataaccaatagccaatgaaaattatttttacatcttcctataaatctttttccaaagaaaacacaaaaaact 28599182  T
Q  426 atacttcaaattcttatgttttagttttcttaataa 461  Q
    ||||| ||||||||||||||||||||||||||||||    
T  28599181 atactccaaattcttatgttttagttttcttaataa 28599146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 295 - 467
Target Start/End: Original strand, 35517119 - 35517291
Alignment:
Q  295 ttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcctat 394  Q
    ||||||||||| ||||||||| ||||||||||||||||||||  |||||||       ||||| |||||| ||||||||||| ||||||||||   ||||    
T  35517119 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattatttttacatctcactat 35517218  T
Q  395 aaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    |||||||||| |||||||||||||||||| |||||| |||||||||||||||||||||||||||||| |||||    
T  35517219 aaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataagtgtga 35517291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 293 - 466
Target Start/End: Complemental strand, 33198797 - 33198624
Alignment:
Q  293 gtttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcct 392  Q
    ||||||||||||||||||||||| |||||||||||||||||||| ||||||||       ||||| |||||  |||| ||||||||||||||||| ||||    
T  33198797 gtttattctcatagaattaaatgcaaattacattcaattttctctctctttcattttctccataaccaataaccaatcaaaattgtttttacatcttcct 33198698  T
Q  393 ataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtg 466  Q
    ||||||||| ||| ||||||||||||||||| || | | ||||||||||| |||||||||||||||||| ||||    
T  33198697 ataaaacttcttttaaagaaaacacaaaaaactagagtccaaattcttatattttagttttcttaataagtgtg 33198624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 293 - 460
Target Start/End: Original strand, 28858303 - 28858473
Alignment:
Q  293 gtttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcct 392  Q
    ||||||||||||| ||||||||| |||||||||||||||||||| ||||||||        |||| |||||| ||||||||||| |||||||||| | ||    
T  28858303 gtttattctcataaaattaaatgcaaattacattcaattttctctctctttcatttttacaataaccaatagccaatgaaaattatttttacatctttct 28858402  T
Q  393 ataaaacttttttcaaagaaaacacaaaaa---attatacttcaaattcttatgttttagttttcttaata 460  Q
    ||||||||||||||||||||||||||||||   | |||| || ||||||||||||||||||||||||||||    
T  28858403 ataaaacttttttcaaagaaaacacaaaaaactactatattttaaattcttatgttttagttttcttaata 28858473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 293 - 467
Target Start/End: Original strand, 12938236 - 12938410
Alignment:
Q  293 gtttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcct 392  Q
    ||||||||||||  ||||||||| ||||||||||||  ||| || |||||| |       |||||||||||| ||||||||||||||||||||   ||||    
T  12938236 gtttattctcatgaaattaaatgcaaattacattcatatttatctctcttttattttctccataatcaatagccaatgaaaattgtttttacactttcct 12938335  T
Q  393 ataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    ||||||||| ||||||||||| ||||||||| |||||| |||||||||||||||||||||||||||||| |||||    
T  12938336 ataaaacttatttcaaagaaagcacaaaaaactatactccaaattcttatgttttagttttcttaataagtgtga 12938410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 295 - 467
Target Start/End: Original strand, 11617020 - 11617192
Alignment:
Q  295 ttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcctat 394  Q
    ||||| ||||| ||| ||||| ||||| |||||||||||||| |||||| |        |||| |||||| |||||||||||||||||||||| ||||||    
T  11617020 ttattttcataaaataaaatgcaaatttcattcaattttctctctcttttatttttactataaccaatagccaatgaaaattgtttttacatcttcctat 11617119  T
Q  395 aaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    |||||||||||||||||||| || ||||| |||||| ||||||||||||||||| |||||||||||| |||||    
T  11617120 aaaacttttttcaaagaaaataccaaaaactatactccaaattcttatgttttaattttcttaataagtgtga 11617192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 293 - 467
Target Start/End: Complemental strand, 24204695 - 24204521
Alignment:
Q  293 gtttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcct 392  Q
    ||||||||||||   |||||||| |||||| ||||||||||||| ||||| ||       ||||| |||||| |||||||||||| ||||||||  ||||    
T  24204695 gtttattctcatgatattaaatgtaaattatattcaattttctctctcttccattttcttcataaccaatagccaatgaaaattgattttacatattcct 24204596  T
Q  393 ataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    ||||||||| || |||||||||||||| |||||||||| |||||||||| |||||||||||||| ||||||||||    
T  24204595 ataaaacttattccaaagaaaacacaataaattatactccaaattcttaggttttagttttcttgataaatgtga 24204521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 366 - 467
Target Start/End: Original strand, 43415468 - 43415569
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgt 465  Q
    |||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| ||| |||    
T  43415468 caatgaaaattgtttttacatcttcctataaaactttttttaaagaaaacacaaaaaattatacttcaaattcttatattttagttttcttagtaagtgt 43415567  T
Q  466 ga 467  Q
    ||    
T  43415568 ga 43415569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 293 - 467
Target Start/End: Complemental strand, 6766100 - 6765925
Alignment:
Q  293 gtttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnnc-ataatcaatagtcaatgaaaattgtttttacatcatcc 391  Q
    ||||||||||||  ||||||||| |||||||||||||||||||| ||||| ||       | |||| ||||||||||| ||||||||||||||||| |||    
T  6766100 gtttattctcattaaattaaatgtaaattacattcaattttctctctcttccatttttttccataaccaatagtcaataaaaattgtttttacatcttcc 6766001  T
Q  392 tataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    ||||||| || || ||| ||||||| |||||| ||||||||||||| |||||||||| |||||||||||| |||||    
T  6766000 tataaaatttattccaatgaaaacataaaaaactatacttcaaatttttatgttttaattttcttaataagtgtga 6765925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 295 - 467
Target Start/End: Complemental strand, 29524205 - 29524033
Alignment:
Q  295 ttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcctat 394  Q
    ||||||||||  ||||||||| |||||||||| ||||||||| |||||| |       ||||| |||| | |||||||||||||||||||||| ||| ||    
T  29524205 ttattctcatgaaattaaatgcaaattacatttaattttctctctcttttattttttccataaccaattgccaatgaaaattgtttttacatcttcccat 29524106  T
Q  395 aaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
     |||||| || |||||||||||||||||||||| || |||||||||||| |||||||||| |||||| |||||    
T  29524105 gaaacttattccaaagaaaacacaaaaaattatgctacaaattcttatgctttagttttcataataagtgtga 29524033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 293 - 441
Target Start/End: Original strand, 14873956 - 14874105
Alignment:
Q  293 gtttattctcatagaattaaa-tgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcc 391  Q
    ||||||||||||| ||||||| || |||||||||| |||||| || ||||||||       ||||| |||||| ||||||||||| |||||||||| |||    
T  14873956 gtttattctcatataattaaaatgcaaattacatttaattttatctctctttcattttctccataaccaatagccaatgaaaattatttttacatcttcc 14874055  T
Q  392 tataaaacttttttcaaagaaaacacaaaaaattatacttcaaattctta 441  Q
    |||||||||||||||||||||||||||||||| |||||| |||| |||||    
T  14874056 tataaaacttttttcaaagaaaacacaaaaaactatactccaaactctta 14874105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 295 - 467
Target Start/End: Original strand, 25572042 - 25572213
Alignment:
Q  295 ttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcctat 394  Q
    ||||||||||  ||||||||| |||||||||| ||||||||| ||||| ||       ||||| |||||  |||||||||||||||||||||| ||| ||    
T  25572042 ttattctcatgaaattaaatgcaaattacatttaattttctctctcttccatttttc-cataaccaatatccaatgaaaattgtttttacatcttcccat 25572140  T
Q  395 aaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
     |||||| || |||||||||||||||||| ||| || |||||||||||| ||||||||||||||||| |||||    
T  25572141 gaaacttattccaaagaaaacacaaaaaactatgctacaaattcttatgctttagttttcttaataagtgtga 25572213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 295 - 467
Target Start/End: Complemental strand, 9864881 - 9864710
Alignment:
Q  295 ttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcctat 394  Q
    ||||||||||  ||||||||| ||||||||||||||||| ||  |||| ||       |||||||||| | ||||||||||||||||||| || ||| ||    
T  9864881 ttattctcatgaaattaaatgcaaattacattcaattttatc--tcttccattttctccataatcaattgccaatgaaaattgtttttacctcttcccat 9864784  T
Q  395 aaaacttttttcaaagaaaacacaa-aaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
     |||||| || |||||||||||||| |||| |||||| |||||||||||||||||||||||||||||| |||||    
T  9864783 gaaacttattccaaagaaaacacaaaaaaactatactccaaattcttatgttttagttttcttaataagtgtga 9864710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 308 - 461
Target Start/End: Original strand, 5963210 - 5963362
Alignment:
Q  308 attaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcctataaaacttttttca 407  Q
    |||||||| |||||||||||||||||||| ||||| ||       ||||| |||||| |||| |||||| |||||||||| ||| ||||||||| ||  |    
T  5963210 attaaatgcaaattacattcaattttctctctcttccattttcttcataaccaatagccaataaaaattatttttacatc-tcccataaaacttattcta 5963308  T
Q  408 aagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataa 461  Q
    ||||||||||||||||||| |||  |||||||||| ||||||||||||||||||    
T  5963309 aagaaaacacaaaaaattagactctaaattcttatattttagttttcttaataa 5963362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 367 - 467
Target Start/End: Original strand, 35022967 - 35023066
Alignment:
Q  367 aatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtg 466  Q
    ||||||||||||||||||||| |||||| ||||||  | |||| |||||||||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  35022967 aatgaaaattgtttttacatcttcctatgaaacttactccaaa-aaaacacaaaaaattatactccaaattcttatgttttagttttcttaataagtgtg 35023065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 293 - 461
Target Start/End: Original strand, 33677477 - 33677645
Alignment:
Q  293 gtttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcct 392  Q
    ||||||||||||  |||||||||  ||| ||||||||||||||  |||||  |       ||||| ||||||||||||||||||||||||||||| ||||    
T  33677477 gtttattctcatgaaattaaatgctaataacattcaattttctttctcttcaattttctccataaccaatagtcaatgaaaattgtttttacatcttcct 33677576  T
Q  393 ataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataa 461  Q
    |||||||||  |  ||| |||||| |||||| ||| ||||||||| |||||||||||||||| ||||||    
T  33677577 ataaaacttagtaaaaaaaaaacataaaaaactattcttcaaatttttatgttttagttttcgtaataa 33677645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 298 - 461
Target Start/End: Original strand, 8701601 - 8701764
Alignment:
Q  298 ttctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcctataaa 397  Q
    |||||||  ||||||||  ||||| |||| ||||||||| ||||| ||       ||||| |||||| |||||||||||||||||||||| ||| || ||    
T  8701601 ttctcatgaaattaaatacaaatttcatttaattttctctctcttccattttttccataaccaatagccaatgaaaattgtttttacatcttcccatgaa 8701700  T
Q  398 acttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataa 461  Q
    |||| || ||||||||||| |||||| ||| || |||||| |||||||||||||||||||||||    
T  8701701 acttattccaaagaaaacataaaaaactatgctacaaatttttatgttttagttttcttaataa 8701764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 293 - 467
Target Start/End: Complemental strand, 7645396 - 7645219
Alignment:
Q  293 gtttattctcatagaattaaatgaaaattacattcaattttctccctcttt---cannnnnnncataatcaatagtcaatgaaaattgtttttacatcat 389  Q
    ||||||||||||  ||||||||| ||||||||||||||||||||  |  ||   ||       |||||| ||||| |||||||||||||||||||||  |    
T  7645396 gtttattctcatgaaattaaatgcaaattacattcaattttctctataattaaccattttctccataattaatagccaatgaaaattgtttttacatgtt 7645297  T
Q  390 cctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    || || ||| || ||  || |||||||||||| |||||||| |||||||||||||||||||||||||||||| |||||    
T  7645296 cccatgaaatttattctaaggaaaacacaaaatattatactccaaattcttatgttttagttttcttaataagtgtga 7645219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 367 - 467
Target Start/End: Complemental strand, 40808811 - 40808712
Alignment:
Q  367 aatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtg 466  Q
    ||||||||||||||||||||| ||| || |||||| || |||||||||||||||||| ||| || |||||||||||| ||||||||||||||||| ||||    
T  40808811 aatgaaaattgtttttacatcttcc-atgaaacttattccaaagaaaacacaaaaaactatgctacaaattcttatgctttagttttcttaataagtgtg 40808713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 366 - 467
Target Start/End: Original strand, 26998384 - 26998485
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgt 465  Q
    |||||||||||||||||||||| ||||||||||||| ||| ||||| ||||||||||| |||  | |||| |   |||||||||||||||||||||||||    
T  26998384 caatgaaaattgtttttacatcttcctataaaacttattttaaagataacacaaaaaactatcttacaaactaccatgttttagttttcttaataaatgt 26998483  T
Q  466 ga 467  Q
    ||    
T  26998484 ga 26998485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 295 - 465
Target Start/End: Complemental strand, 30830760 - 30830590
Alignment:
Q  295 ttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcctat 394  Q
    ||||||||||  ||||||||| ||||||||| |||||||||| || |||||        ||||||||||  |||||||| || |||||| ||| ||  ||    
T  30830760 ttattctcatgaaattaaatgcaaattacatacaattttctctctttttcattttctcaataatcaataaccaatgaaatttttttttaaatcttctcat 30830661  T
Q  395 aaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgt 465  Q
     |||||| ||||||| ||||||||||||   ||||| ||| ||||||||||||| ||||||||||||||||    
T  30830660 gaaacttatttcaaaaaaaacacaaaaagacatactccaatttcttatgttttaattttcttaataaatgt 30830590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 366 - 467
Target Start/End: Original strand, 32010169 - 32010270
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgt 465  Q
    ||||||||||| |||||||||| ||||||||||||| ||||||||| ||||||||||| |||| | |||| |  ||||| |||||||||||||||| |||    
T  32010169 caatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaaactatattacaaactactatgtattagttttcttaataagtgt 32010268  T
Q  466 ga 467  Q
    ||    
T  32010269 ga 32010270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 367 - 467
Target Start/End: Complemental strand, 35115896 - 35115795
Alignment:
Q  367 aatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaa-cacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgt 465  Q
    ||||||||||||||||||||| | ||||||||||| ||  ||| |||| ||||||||| |||||| |||||||||||||||||||| ||||||||| |||    
T  35115896 aatgaaaattgtttttacatctttctataaaacttattaaaaaaaaaaacacaaaaaactatactccaaattcttatgttttagttctcttaataagtgt 35115797  T
Q  466 ga 467  Q
    ||    
T  35115796 ga 35115795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 293 - 437
Target Start/End: Complemental strand, 40584564 - 40584422
Alignment:
Q  293 gtttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcct 392  Q
    ||||||| ||||  ||||||||| |||||||||||||||||||| ||||||||       ||||| ||| |  |||||||||||||||||||||| |||     
T  40584564 gtttattttcatgaaattaaatgcaaattacattcaattttctctctctttcatttttcccataaccaacaaccaatgaaaattgtttttacatcttccc 40584465  T
Q  393 ataaaacttttttcaaagaaaacacaaaaaattatacttcaaatt 437  Q
    ||||||||| ||  |||||||||||  |||||||| |||||||||    
T  40584464 ataaaacttattctaaagaaaacac--aaaattatgcttcaaatt 40584422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 366 - 461
Target Start/End: Original strand, 38071062 - 38071157
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataa 461  Q
    |||||||||||||||||||||| |||| |||||||| ||||||||| ||||||||||| |||  | |||| |   |||||||||||||||||||||    
T  38071062 caatgaaaattgtttttacatcttcctgtaaaacttatttcaaagataacacaaaaaactatgttacaaactaccatgttttagttttcttaataa 38071157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 366 - 467
Target Start/End: Complemental strand, 4891732 - 4891630
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaat-tatacttcaaattcttatgttttagttttcttaataaatg 464  Q
    |||| ||||||||||||||||| ||||||||||||| ||||||||| |||||||||||  |||  | |||| |  ||| |||||||||||||||||||||    
T  4891732 caataaaaattgtttttacatcttcctataaaacttatttcaaagataacacaaaaaaactatgttacaaactactatattttagttttcttaataaatg 4891633  T
Q  465 tga 467  Q
    |||    
T  4891632 tga 4891630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 366 - 461
Target Start/End: Original strand, 32273738 - 32273837
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaatt--ct--tatgttttagttttcttaataa 461  Q
    |||||||||||||||||| ||| ||||||||||||| ||||||||| ||||||||||| |||  | ||||||  ||  ||||||||||||||||||||||    
T  32273738 caatgaaaattgtttttatatcttcctataaaacttatttcaaagataacacaaaaaactatgttacaaattgactactatgttttagttttcttaataa 32273837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 295 - 463
Target Start/End: Original strand, 44454987 - 44455153
Alignment:
Q  295 ttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcctat 394  Q
    ||||||||||  ||||||||| |||||||||||||||||  | ||||| ||        ||||||||||| |||||||  || ||||||| |  ||| ||    
T  44454987 ttattctcatgaaattaaatgcaaattacattcaatttttcctctcttccattttctctataatcaatagccaatgaa--ttttttttacgttttcccat 44455084  T
Q  395 aaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaat 463  Q
     |||||| ||  ||| ||||||||||||| |||||| ||||||| ||| ||||||||||||||||||||    
T  44455085 gaaacttattcaaaataaaacacaaaaaactatactccaaattcatatattttagttttcttaataaat 44455153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 355 - 463
Target Start/End: Original strand, 32428029 - 32428138
Alignment:
Q  355 taatcaatagtcaatgaaaattgtttttacatcatcctataaaacttttt-tcaaagaaaacacaaaaaattatacttcaaattcttatgttttagtttt 453  Q
    |||||||||||||||||||||| |||||||||  | | || |||||| || | ||| ||||||| ||  | |||||| ||||||||||||||||||||||    
T  32428029 taatcaatagtcaatgaaaattatttttacatgtttccatgaaacttattataaaaaaaaacaccaaggactatactccaaattcttatgttttagtttt 32428128  T
Q  454 cttaataaat 463  Q
     |||||||||    
T  32428129 tttaataaat 32428138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 373 - 464
Target Start/End: Original strand, 9294725 - 9294816
Alignment:
Q  373 aattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatg 464  Q
    ||||||||||||||  | | || |||||| ||||||  |||| |||||||||||||||||||| |  ||| |||||||||||||||||||||    
T  9294725 aattgtttttacatttttccatgaaacttatttcaagaaaaatacaaaaaattatacttcaaactactatcttttagttttcttaataaatg 9294816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 365 - 411
Target Start/End: Complemental strand, 16495020 - 16494974
Alignment:
Q  365 tcaatgaaaattgtttttacatcatcctataaaacttttttcaaaga 411  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||||    
T  16495020 tcaatgaaaattgtttttacatcttcctataaaacttatttcaaaga 16494974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 372 - 467
Target Start/End: Complemental strand, 33933010 - 33932915
Alignment:
Q  372 aaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    ||||||| |||||||| | |||||||||||  | |||  | || ||||||||||||||| |||| |  |||||||||||||||||||||| |||||    
T  33933010 aaattgtgtttacatctttctataaaacttaatccaagaataatacaaaaaattatactacaaaatactatgttttagttttcttaataagtgtga 33932915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 366 - 466
Target Start/End: Original strand, 4707488 - 4707585
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgt 465  Q
    |||||||||||||||| ||||| |||  | |||||| ||  || |||||||||||||| |||||| ||||   | |||||||||| ||||||||||||||    
T  4707488 caatgaaaattgttttaacatcttcccgttaaacttattctaaggaaaacacaaaaaactatactccaaa---tcatgttttagtgttcttaataaatgt 4707584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 376 - 467
Target Start/End: Complemental strand, 11825438 - 11825351
Alignment:
Q  376 tgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    |||||||||||| | | || |||||| || ||||||||||||||    ||||| |  ||||||||||||||||||||||||||||| |||||    
T  11825438 tgtttttacatctttccatgaaacttattccaaagaaaacacaa----ttatattcaaaattcttatgttttagttttcttaataagtgtga 11825351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 366 - 467
Target Start/End: Complemental strand, 792449 - 792348
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgt 465  Q
    |||||| |||| |||||||||| | | || |||||| || ||| || ||||||||||||||||| ||||||   || || |||||||||||||||| |||    
T  792449 caatgagaattatttttacatctttccatgaaacttattccaaggagaacacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgt 792350  T
Q  466 ga 467  Q
    ||    
T  792349 ga 792348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 354 - 419
Target Start/End: Original strand, 9709568 - 9709633
Alignment:
Q  354 ataatcaatagtcaatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaa 419  Q
    ||||||||||   ||||||||||||||| ||||| ||||||||||||| |||||| || |||||||    
T  9709568 ataatcaataacaaatgaaaattgttttcacatcttcctataaaacttgtttcaaggataacacaa 9709633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 366 - 467
Target Start/End: Complemental strand, 14565466 - 14565365
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgt 465  Q
    |||||| |||| |||||||||| | | || |||||| || ||| || ||||||||||||||||| ||||||   || || |||||||||||||||| |||    
T  14565466 caatgagaattatttttacatctttccatgaaacttattccaaggagaacacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgt 14565367  T
Q  466 ga 467  Q
    ||    
T  14565366 ga 14565365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 366 - 467
Target Start/End: Complemental strand, 18834003 - 18833902
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgt 465  Q
    |||||| ||||||||||||||| | | || |||||| || |||  | ||||||||||||||||| |||||||   || |||||| ||||||||||| |||    
T  18834003 caatgataattgtttttacatctttccatgaaacttattccaagaataacacaaaaaattatacctcaaattacaatattttagctttcttaataagtgt 18833904  T
Q  466 ga 467  Q
    ||    
T  18833903 ga 18833902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 366 - 467
Target Start/End: Original strand, 21539820 - 21539921
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgt 465  Q
    |||||| |||| |||||||||| | | || |||||| || ||| || ||||||||||||||||| ||||||   || || |||||||||||||||| |||    
T  21539820 caatgagaattatttttacatctttccatgaaacttattccaaggagaacacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgt 21539919  T
Q  466 ga 467  Q
    ||    
T  21539920 ga 21539921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 395 - 453
Target Start/End: Complemental strand, 5280595 - 5280536
Alignment:
Q  395 aaaacttttttcaaagaaaacacaaaaaat-tatacttcaaattcttatgttttagtttt 453  Q
    |||||||||| | ||||||||||||||||  |||| | ||||||||||||||||||||||    
T  5280595 aaaactttttcccaagaaaacacaaaaaaactatagtccaaattcttatgttttagtttt 5280536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 404 - 467
Target Start/End: Complemental strand, 15858744 - 15858681
Alignment:
Q  404 ttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    ||||| || ||||||||||||||||| ||||||   || || ||||||||||||||||||||||    
T  15858744 ttcaaggagaacacaaaaaattatacctcaaatcactaagtattagttttcttaataaatgtga 15858681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 373 - 467
Target Start/End: Original strand, 4092081 - 4092175
Alignment:
Q  373 aattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    |||| |||||||||| | | || |||||| || ||| || ||||||||||||||||| ||||||   || || |||||||||||||||| |||||    
T  4092081 aattatttttacatctttccatgaaacttattccaaggagaacacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgtga 4092175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 366 - 467
Target Start/End: Original strand, 10478241 - 10478342
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgt 465  Q
    |||||| |||| |||||||||| | | || |||||| |||||| || ||||||||||||||||  |||| |   || || |||||||||||||||| |||    
T  10478241 caatgagaattatttttacatctttccatgaaacttatttcaaggagaacacaaaaaattatatctcaactcactaagtgttagttttcttaataagtgt 10478340  T
Q  466 ga 467  Q
    ||    
T  10478341 ga 10478342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 423
Target Start/End: Original strand, 20380202 - 20380247
Alignment:
Q  378 tttttacatcatcctataaaacttttttcaaagaaaacacaaaaaa 423  Q
    |||||||||  ||||||||||||| ||||||||| |||||||||||    
T  20380202 tttttacattttcctataaaacttatttcaaagataacacaaaaaa 20380247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 366 - 467
Target Start/End: Original strand, 28492583 - 28492684
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgt 465  Q
    |||||| |||| |||||||||  | | || |||||| || ||| || ||||||||||||||||  ||||||  ||| || |||||||||||||||| |||    
T  28492583 caatgagaattatttttacatatttccatgaaacttattccaaggagaacacaaaaaattatatctcaaatcattaagtgttagttttcttaataagtgt 28492682  T
Q  466 ga 467  Q
    ||    
T  28492683 ga 28492684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 366 - 467
Target Start/End: Complemental strand, 38071543 - 38071442
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgt 465  Q
    |||||| |||| |||||||||| | | | ||||||| ||  || || || |||||||||||||||||||||   || || |||||||||||||||| |||    
T  38071543 caatgagaattatttttacatctttccaaaaaacttattctaaggagaatacaaaaaattatacttcaaatcactaagtgttagttttcttaataagtgt 38071444  T
Q  466 ga 467  Q
    ||    
T  38071443 ga 38071442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 366 - 467
Target Start/End: Complemental strand, 38549736 - 38549635
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgt 465  Q
    |||||| |||| |||||||||| | | || |||||| || ||| || || |||||||||||||| ||||||   || || |||||||||||||||| |||    
T  38549736 caatgagaattatttttacatctttccatgaaacttattccaaggagaatacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgt 38549637  T
Q  466 ga 467  Q
    ||    
T  38549636 ga 38549635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 365 - 453
Target Start/End: Original strand, 44442197 - 44442286
Alignment:
Q  365 tcaatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaa-aaattatacttcaaattcttatgttttagtttt 453  Q
    ||||||||||||||||||||||| || ||||||| || ||| ||| | |||||||| ||| |||  | |||| | |||||||||||||||    
T  44442197 tcaatgaaaattgtttttacatcttcatataaaatttattttaaaaataacacaaataaactatgttacaaactattatgttttagtttt 44442286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 366 - 467
Target Start/End: Original strand, 44803961 - 44804062
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgt 465  Q
    |||||| |||| |||||||||| | | || |||||| || ||| || ||||||||||||||||| ||||||   || || ||| |||||||||||| |||    
T  44803961 caatgagaattatttttacatctttccattaaacttattccaaggagaacacaaaaaattatacctcaaatcactaagtgttaattttcttaataagtgt 44804060  T
Q  466 ga 467  Q
    ||    
T  44804061 ga 44804062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 373 - 461
Target Start/End: Original strand, 8784465 - 8784553
Alignment:
Q  373 aattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataa 461  Q
    |||| |||||||||| | | || |||||| ||||||  | ||||||||||||||||| ||||||   || || ||||||||||||||||    
T  8784465 aattatttttacatctttccatgaaacttatttcaagaagaacacaaaaaattatacctcaaatcactaagtgttagttttcttaataa 8784553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 367 - 467
Target Start/End: Original strand, 35832476 - 35832576
Alignment:
Q  367 aatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtg 466  Q
    ||||| |||| |||||||||| | | || ||| || || ||| || ||||||||||||||||| ||||||   || || |||||||||||||||| ||||    
T  35832476 aatgagaattatttttacatctttccatgaaatttattccaaggagaacacaaaaaattatacctcaaatcactaagtgttagttttcttaataagtgtg 35832575  T
Q  467 a 467  Q
    |    
T  35832576 a 35832576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 107; Significance: 2e-53; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 227 - 467
Target Start/End: Original strand, 21542346 - 21542586
Alignment:
Q  227 cacattttctttgtcccaaaatataagnnnnnnngacaaacttttatctttttcaatannnnnnnngtttattctcatagaattaaatgaaaattacatt 326  Q
    |||||||||||||||||||||||||||       |||||||||||||||||| |||||          |||||||||||  |||||||| ||||||||||    
T  21542346 cacattttctttgtcccaaaatataagcaaaaaagacaaacttttatcttttccaatatttttttttgttattctcataatattaaatgcaaattacatt 21542445  T
Q  327 caattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaatta 426  Q
    |||||||||   |||||||       ||||| |||||| |||| ||||||||||||||||| |||||||||||||||| |||||||||||||||||| ||    
T  21542446 caattttctttttctttcattttttccataaccaatagccaataaaaattgtttttacatcttcctataaaactttttccaaagaaaacacaaaaaacta 21542545  T
Q  427 tacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    |||| |||||||||||||||||||||||||||||| |||||    
T  21542546 tactccaaattcttatgttttagttttcttaataagtgtga 21542586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 295 - 461
Target Start/End: Complemental strand, 11082410 - 11082244
Alignment:
Q  295 ttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcctat 394  Q
    ||||||||||| ||||||||| ||||||||||||||||||||  |||||||       ||||| |||||| ||||||||||||||||||||||  |||||    
T  11082410 ttattctcataaaattaaatgcaaattacattcaattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatctccctat 11082311  T
Q  395 aaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataa 461  Q
    |||||||||| |||||||||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  11082310 aaaactttttccaaagaaaacacaaaaaactatactccaaattcttatgttttagttttcttaataa 11082244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 227 - 467
Target Start/End: Complemental strand, 35129288 - 35129047
Alignment:
Q  227 cacattttctttgtcccaaaatataagnnnnnnngacaaacttttatctttttcaatannnnnnnngtttattctcatagaattaaatgaaaattacatt 326  Q
    ||||||||||||||||||||||| |||       |||||||||||||||||| ||| |          |||||||| || ||||||||| ||||||||||    
T  35129288 cacattttctttgtcccaaaatacaagcaaaaaagacaaacttttatcttttccaagatttttttttgttattctcgtaaaattaaatgcaaattacatt 35129189  T
Q  327 caattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgttt-ttacatcatcctataaaacttttttcaaagaaaacacaaaaaatt 425  Q
    ||||||||||  |||||||       ||||| |||||  ||||||||||||||| ||||||| |||||||||||||||| |||||||||||||||||| |    
T  35129188 caattttctctttctttcattttttccataaccaataaccaatgaaaattgtttattacatcttcctataaaactttttccaaagaaaacacaaaaaact 35129089  T
Q  426 atacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    ||||| |||||||||||||||||||||||||||||| |||||    
T  35129088 atactccaaattcttatgttttagttttcttaataagtgtga 35129047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 227 - 463
Target Start/End: Complemental strand, 3095954 - 3095717
Alignment:
Q  227 cacattttctttgtcccaaaatataagnnnnnnngacaaacttttatctttttcaatannnnnnnngtt--tattctcatagaattaaatgaaaattaca 324  Q
    |||||||||||||||||||||||||||       |||||||||||||||||| ||| |         ||  |||||||||| ||||||||| ||||||||    
T  3095954 cacattttctttgtcccaaaatataagcaaaaaagacaaacttttatcttttccaagatttttttttttgttattctcataaaattaaatgcaaattaca 3095855  T
Q  325 ttcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaat 424  Q
    ||||||||||||  | |||||       |||||||||||| |||||||||||||||||||||| |||||||||||||||  ||||||||||||||||||     
T  3095854 ttcaattttctctttatttcattttttccataatcaatagccaatgaaaattgtttttacatcttcctataaaacttttc-caaagaaaacacaaaaaac 3095756  T
Q  425 tatacttcaaattcttatgttttagttttcttaataaat 463  Q
    |||||| |||||| ||||| |||||||||||||||||||    
T  3095755 tatactccaaatttttatgctttagttttcttaataaat 3095717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 295 - 467
Target Start/End: Complemental strand, 34177806 - 34177634
Alignment:
Q  295 ttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcctat 394  Q
    ||||||||||| ||||||||| ||||||||||||||| ||||  |||||||       ||||| |||||| ||||||||||||||||||||||  |||||    
T  34177806 ttattctcataaaattaaatgcaaattacattcaattatctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatctccctat 34177707  T
Q  395 aaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    |||  ||||| |||||||||||||||||| |||| | ||||||||||||||||| |||||||||||| |||||    
T  34177706 aaatttttttccaaagaaaacacaaaaaactatattccaaattcttatgttttaattttcttaataagtgtga 34177634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 295 - 467
Target Start/End: Complemental strand, 7275040 - 7274868
Alignment:
Q  295 ttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcctat 394  Q
    ||||||||||  ||||||||  |||||||||| ||||||||| ||||||||       ||||| |||||| |||||||||||||||||||||| ||| ||    
T  7275040 ttattctcatgaaattaaatacaaattacatttaattttctctctctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcccat 7274941  T
Q  395 aaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
     |||||| || ||||||||| |||||||| ||| || |||||||||||||||||||||||||||||| |||||    
T  7274940 gaaacttattccaaagaaaatacaaaaaactatgctacaaattcttatgttttagttttcttaataagtgtga 7274868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 294 - 463
Target Start/End: Complemental strand, 30794358 - 30794189
Alignment:
Q  294 tttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatccta 393  Q
    |||||||||||  ||||||||| |||||| ||| ||||||||| |||||  |       ||| | |||||| ||||||||| |||||||||||| |||||    
T  30794358 tttattctcatgaaattaaatgcaaattagatttaattttctctctcttctattttctccatcaccaatagccaatgaaaaatgtttttacatcttccta 30794259  T
Q  394 taaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaat 463  Q
    |||||||| || |||| |||||| ||||||||||||||||||||||||| ||||||||||||||||||||    
T  30794258 taaaacttattccaaataaaacataaaaaattatacttcaaattcttatattttagttttcttaataaat 30794189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 293 - 467
Target Start/End: Complemental strand, 12461596 - 12461422
Alignment:
Q  293 gtttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcct 392  Q
    ||||||||||||  ||||||||  |||||||||||||||||||  |||||  |       ||||| |||||| |||||||||||||||||||||| | ||    
T  12461596 gtttattctcatgaaattaaatccaaattacattcaattttctgtctcttctattttctccataaccaatagccaatgaaaattgtttttacatctttct 12461497  T
Q  393 ataaaa-cttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    |||||| ||| |||||||||||| | |||||| |||| | |||||||| |||||||||||||||||||||||||||    
T  12461496 ataaaaacttatttcaaagaaaata-aaaaaactatattccaaattctcatgttttagttttcttaataaatgtga 12461422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 353 - 467
Target Start/End: Complemental strand, 14573234 - 14573121
Alignment:
Q  353 cataatcaatagtcaatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttt 452  Q
    ||||||||| |  ||||||||||| |||||||||||||| |||| |||| |||||||||||| || |||||||||||| ||||||| ||| |||||||||    
T  14573234 cataatcaacaaacaatgaaaattatttttacatcatcccataatacttatttcaaagaaaatac-aaaaattatactccaaattcatatattttagttt 14573136  T
Q  453 tcttaataaatgtga 467  Q
    |||||||||||||||    
T  14573135 tcttaataaatgtga 14573121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 400 - 467
Target Start/End: Original strand, 9428846 - 9428913
Alignment:
Q  400 ttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    |||||| ||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  9428846 tttttttaaaaaaaacacaaaaaattatacttcaaattcttatgttttagttttattaataaatgtga 9428913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 293 - 429
Target Start/End: Original strand, 31107185 - 31107320
Alignment:
Q  293 gtttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcct 392  Q
    ||||||||| ||| ||||||||| |||||||||||||||| ||  ||||||||        |||||||||||||||| |||||  |||||||||  || |    
T  31107185 gtttattcttataaaattaaatgcaaattacattcaattt-ctttctctttcattttttctataatcaatagtcaataaaaatcatttttacattttctt 31107283  T
Q  393 ataaaacttttttcaaagaaaacacaaaaaattatac 429  Q
    |||||  |||||||||||||||||||||||| |||||    
T  31107284 ataaattttttttcaaagaaaacacaaaaaactatac 31107320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 365 - 467
Target Start/End: Original strand, 15830759 - 15830861
Alignment:
Q  365 tcaatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatg 464  Q
    |||||||||||| |||||||||| |||||| |||||| ||| ||| | |||||||||||||||  |  ||| | ||||||||||||||| ||||||||||    
T  15830759 tcaatgaaaattttttttacatcttcctattaaacttattttaaaaataacacaaaaaattatgttagaaactattatgttttagtttttttaataaatg 15830858  T
Q  465 tga 467  Q
    |||    
T  15830859 tga 15830861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 366 - 467
Target Start/End: Original strand, 4032052 - 4032156
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaa-ttct--tatgttttagttttcttaataaa 462  Q
    |||||||||||||||||||||| ||| ||||||||| ||||||||| ||||||||||| |||  | |||| | ||  ||||||||||||||||||||||     
T  4032052 caatgaaaattgtttttacatcttccgataaaacttatttcaaagataacacaaaaaactatgttacaaactactactatgttttagttttcttaataag 4032151  T
Q  463 tgtga 467  Q
    |||||    
T  4032152 tgtga 4032156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 366 - 423
Target Start/End: Original strand, 16524444 - 16524501
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaa 423  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||| |||||||||||    
T  16524444 caatgaaaattgtttttacatcttcctataaaacttatttcaaagataacacaaaaaa 16524501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 293 - 467
Target Start/End: Complemental strand, 17751911 - 17751737
Alignment:
Q  293 gtttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcct 392  Q
    ||||||||| ||  || |||||| ||||||||||||||||| || ||||| ||       |||||||||||| ||||||  | |||||||||||  |       
T  17751911 gtttattcttatgaaactaaatgcaaattacattcaattttttctctcttccattttctccataatcaatagccaatgagcactgtttttacatttttta 17751812  T
Q  393 ataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    | |||||||  |  ||||||||||||||||| |||||| ||||||||||| ||||| |||||||||||| |||||    
T  17751811 aaaaaacttaatctaaagaaaacacaaaaaactatactccaaattcttatattttaattttcttaataagtgtga 17751737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 371 - 467
Target Start/End: Complemental strand, 5822123 - 5822027
Alignment:
Q  371 aaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    ||||||||||||||||| | |||| |||||| || |||||| ||||||| |||||||||| |||| | | || |||||||||||||||||| |||||    
T  5822123 aaaattgtttttacatctttctatgaaacttattccaaagataacacaagaaattatactacaaactataatattttagttttcttaataagtgtga 5822027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 366 - 423
Target Start/End: Original strand, 4988008 - 4988065
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaa 423  Q
    ||||||||||| |||||||||| ||||||||||||| ||||||||| |||||||||||    
T  4988008 caatgaaaattatttttacatcttcctataaaacttatttcaaagataacacaaaaaa 4988065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 366 - 423
Target Start/End: Complemental strand, 16013526 - 16013469
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaa 423  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||| || ||||||||    
T  16013526 caatgaaaattgtttttacatcttcctataaaacttatttcaaagataatacaaaaaa 16013469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 366 - 460
Target Start/End: Original strand, 17598356 - 17598450
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaata 460  Q
    |||||| |||| |||||||||| | | |||||| || || |||||| ||||||||||||||||| ||||||  ||| || ||| |||||||||||    
T  17598356 caatgagaattatttttacatctttccataaaatttattccaaagagaacacaaaaaattatacctcaaatcattaagtgttaattttcttaata 17598450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 357 - 467
Target Start/End: Original strand, 21964011 - 21964121
Alignment:
Q  357 atcaatagtcaatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttctt 456  Q
    |||||||  |||| |||||| |||||||||| | | ||||||||| ||| || || ||||||||||||||||  || ||||  |||||||||||||| ||    
T  21964011 atcaataaccaataaaaattatttttacatctttccataaaacttattttaaggagaacacaaaaaattatatctctaattactatgttttagttttatt 21964110  T
Q  457 aataaatgtga 467  Q
    | ||| |||||    
T  21964111 agtaagtgtga 21964121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 366 - 467
Target Start/End: Complemental strand, 5881846 - 5881746
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgt 465  Q
    |||| ||||||||||||||||| | |||| ||||||  | |||||| |||| || |||||||||| |||| | | || |||||| |||||||||||||||    
T  5881846 caattaaaattgtttttacatctttctatgaaacttagtccaaagataacagaagaaattatactgcaaactataatattttag-tttcttaataaatgt 5881748  T
Q  466 ga 467  Q
    ||    
T  5881747 ga 5881746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 366 - 467
Target Start/End: Original strand, 10227975 - 10228076
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgt 465  Q
    |||||| |||| |||||||||| | | || |||||| |||||| || ||||| ||||||||||| ||||||   || || |||||||||||||||| |||    
T  10227975 caatgagaattatttttacatctttcgatgaaacttatttcaaggagaacactaaaaattatacctcaaatcactaagtgttagttttcttaataagtgt 10228074  T
Q  466 ga 467  Q
    ||    
T  10228075 ga 10228076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 368 - 420
Target Start/End: Original strand, 3888494 - 3888546
Alignment:
Q  368 atgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaa 420  Q
    ||||||||||||| |||||| ||||||||||||| ||||||| | ||||||||    
T  3888494 atgaaaattgtttctacatcttcctataaaacttatttcaaatataacacaaa 3888546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 366 - 401
Target Start/End: Complemental strand, 5300694 - 5300659
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaactt 401  Q
    |||||||||||||||||||||| |||||||||||||    
T  5300694 caatgaaaattgtttttacatcttcctataaaactt 5300659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 366 - 436
Target Start/End: Original strand, 30949198 - 30949268
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaat 436  Q
    |||||| |||| |||||||||| | | || |||||| |||||| || ||||||||||||||||| ||||||    
T  30949198 caatgagaattatttttacatctttccatgaaacttatttcaaggagaacacaaaaaattatacctcaaat 30949268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 366 - 467
Target Start/End: Original strand, 374162 - 374263
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgt 465  Q
    ||||||||||| ||| |||||| | | || |||||| ||  || || ||||||||||||||||| ||||||   || || |||||||| |||||||||||    
T  374162 caatgaaaattatttatacatctttccatgaaacttattctaaggagaacacaaaaaattatacctcaaataactaagtattagtttttttaataaatgt 374261  T
Q  466 ga 467  Q
    ||    
T  374262 ga 374263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 467
Target Start/End: Complemental strand, 5121538 - 5121449
Alignment:
Q  378 tttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    |||||||||| | | || |||||| ||| || || ||||||||||| ||||| ||||||  ||| || |||||||||||||||| |||||    
T  5121538 tttttacatctttccatgaaacttattttaaggagaacacaaaaaactatacctcaaatcattaagtgttagttttcttaataagtgtga 5121449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 367 - 467
Target Start/End: Complemental strand, 17721902 - 17721802
Alignment:
Q  367 aatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtg 466  Q
    ||||| |||| |||||||||  | | || |||||| || ||| || ||||||||||||||||| ||||||   || || |||||||||||||||| ||||    
T  17721902 aatgagaattatttttacatgtttccatgaaacttattccaaggagaacacaaaaaattatacctcaaatcactaagtattagttttcttaataagtgtg 17721803  T
Q  467 a 467  Q
    |    
T  17721802 a 17721802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 367 - 467
Target Start/End: Original strand, 30766510 - 30766610
Alignment:
Q  367 aatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtg 466  Q
    ||||| |||| |||||||||| | | || |||||| || ||| || ||||||||||||||||  ||||||   || || |||||||||||||||| ||||    
T  30766510 aatgagaattatttttacatctttccatgaaacttattccaaggagaacacaaaaaattatatctcaaatcactaagtgttagttttcttaataagtgtg 30766609  T
Q  467 a 467  Q
    |    
T  30766610 a 30766610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 367 - 467
Target Start/End: Complemental strand, 32882784 - 32882684
Alignment:
Q  367 aatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtg 466  Q
    ||||| ||||||||||||||| | | || |||||| ||| |   | ||||||||||||||||| ||||| |   ||||||| ||||||||||||| ||||    
T  32882784 aatgagaattgtttttacatctttccatgaaacttattttatgaagaacacaaaaaattatacctcaaactacaatgtttttgttttcttaataagtgtg 32882685  T
Q  467 a 467  Q
    |    
T  32882684 a 32882684  T

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Target: scaffold0442 (Bit Score: 100; Significance: 3e-49; HSPs: 1)
Name: scaffold0442
Description:

Target: scaffold0442; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 293 - 461
Target Start/End: Original strand, 10039 - 10207
Alignment:
Q  293 gtttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcct 392  Q
    ||||||||||||| ||||||||| |||||||||||||||||||| ||||||||       ||||| ||||||||||||||||||||||||||||| ||||    
T  10039 gtttattctcatacaattaaatgcaaattacattcaattttctctctctttcattttttccataaccaatagtcaatgaaaattgtttttacatcttcct 10138  T
Q  393 ataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataa 461  Q
    ||||||||||||  ||||||||||||||||| || | | ||||||||||||||||| ||||||||||||    
T  10139 ataaaactttttctaaagaaaacacaaaaaactacattccaaattcttatgttttaattttcttaataa 10207  T

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Target: scaffold0300 (Bit Score: 100; Significance: 3e-49; HSPs: 1)
Name: scaffold0300
Description:

Target: scaffold0300; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 295 - 467
Target Start/End: Complemental strand, 738 - 566
Alignment:
Q  295 ttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcctat 394  Q
    ||||||||||| ||||||||| ||||||||||||||||| ||  |||||||       ||||| |||||| ||||||||||||||||||||||  |||||    
T  738 ttattctcataaaattaaatgcaaattacattcaattttatctttctttcattttttccataaccaatagccaatgaaaattgtttttacatctccctat 639  T
Q  395 aaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    |||||||||||||||||||||||| |||| |||||| |||||||||||||||||||||||||||||| |||||    
T  638 aaaacttttttcaaagaaaacacataaaactatactccaaattcttatgttttagttttcttaataagtgtga 566  T

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Target: scaffold0062 (Bit Score: 90; Significance: 3e-43; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 293 - 467
Target Start/End: Complemental strand, 44938 - 44764
Alignment:
Q  293 gtttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcct 392  Q
    |||||||||| || ||||||||| |||||||||| ||||||| | ||||||||       ||||| |||||| |||||||||||||||||  ||  ||||    
T  44938 gtttattctcgtaaaattaaatgcaaattacatttaattttccctctctttcattttttccataaccaatagccaatgaaaattgttttttaatattcct 44839  T
Q  393 ataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    |||||||||||| |||||||||||||||||| |||||| |||||| |||||||||||||||||||||||||||||    
T  44838 ataaaactttttccaaagaaaacacaaaaaaatatactccaaattattatgttttagttttcttaataaatgtga 44764  T

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Target: scaffold0018 (Bit Score: 88; Significance: 5e-42; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 230 - 463
Target Start/End: Original strand, 154792 - 155024
Alignment:
Q  230 attttctttgtcccaaaatataagnnnnnnngacaaacttttatctttttcaatannnnnnnngtttattctcatagaattaaatgaaaattacattcaa 329  Q
    |||||||||||| |||||||||||       || ||||||||||||||||||| |         |||||||||||| ||||||||| |||||||||| ||    
T  154792 attttctttgtctcaaaatataagtaaaaaagataaacttttatctttttcaagattttttttttttattctcataaaattaaatgcaaattacattaaa 154891  T
Q  330 ttttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatac 429  Q
    |||||||  |||||||       ||||| |||||| ||||| |||||||||||||||| | |||||||||||||||||||||||| || ||||| ||||     
T  154892 ttttctctatctttcattttttccataaccaatagccaatgtaaattgtttttacatctttctataaaacttttttcaaagaaaatac-aaaaactatat 154990  T
Q  430 ttcaaattcttatgttttagttttcttaataaat 463  Q
    |||| |||||||||||||||||||||||||||||    
T  154991 ttcagattcttatgttttagttttcttaataaat 155024  T

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Target: scaffold0132 (Bit Score: 86; Significance: 7e-41; HSPs: 2)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 293 - 467
Target Start/End: Original strand, 1006 - 1180
Alignment:
Q  293 gtttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcct 392  Q
    ||||||||||||| ||||||| | |||||||||| ||||||||||||||||||       ||||| ||||| |||||||||| |||||||||||| | ||    
T  1006 gtttattctcataaaattaaacgcaaattacattgaattttctccctctttcattttttccataaccaatactcaatgaaaactgtttttacatctttct 1105  T
Q  393 ataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    ||||||||||||| ||| ||||||||||||| |||||| |||||| |||| ||||||||||  ||||||||||||    
T  1106 ataaaacttttttaaaaaaaaacacaaaaaactatactccaaatttttatattttagtttttataataaatgtga 1180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #2
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 293 - 467
Target Start/End: Original strand, 8966 - 9140
Alignment:
Q  293 gtttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcct 392  Q
    ||||||||||||| ||||||| | |||||||||| ||||||||||||||||||       ||||| ||||| |||||||||| |||||||||||| | ||    
T  8966 gtttattctcataaaattaaacgcaaattacattgaattttctccctctttcattttttccataaccaatactcaatgaaaactgtttttacatctttct 9065  T
Q  393 ataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
    ||||||||||||| ||| ||||||||||||| |||||| |||||| |||| ||||||||||  ||||||||||||    
T  9066 ataaaacttttttaaaaaaaaacacaaaaaactatactccaaatttttatattttagtttttataataaatgtga 9140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0774 (Bit Score: 84; Significance: 1e-39; HSPs: 1)
Name: scaffold0774
Description:

Target: scaffold0774; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 293 - 441
Target Start/End: Complemental strand, 3595 - 3447
Alignment:
Q  293 gtttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcct 392  Q
    ||||||||||||| ||||||||| |||||||||||||||||||| ||||||||       ||||| |||||| ||||||||||| |||||||||| ||||    
T  3595 gtttattctcatacaattaaatgcaaattacattcaattttctctctctttcattttttccataaccaatagccaatgaaaattatttttacatcttcct 3496  T
Q  393 ataaaacttttttcaaagaaaacacaaaaaattatacttcaaattctta 441  Q
    ||||||||||||  ||||||||||||||||| |||||| ||||||||||    
T  3495 ataaaactttttcaaaagaaaacacaaaaaactatactccaaattctta 3447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 70; Significance: 3e-31; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 295 - 461
Target Start/End: Original strand, 157790 - 157956
Alignment:
Q  295 ttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcctat 394  Q
    ||||||||||  ||||||||| |||||||||| ||||||||| |||||| |       ||||| |||| | ||||||||||||||||||||||  || ||    
T  157790 ttattctcatgaaattaaatgcaaattacatttaattttctctctcttttattttttccataaccaattgccaatgaaaattgtttttacatctccccat 157889  T
Q  395 aaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataa 461  Q
     |||||| || |||||||||||||||||| ||| || |||||||||||| |||||||||||||||||    
T  157890 gaaacttattccaaagaaaacacaaaaaactatgctacaaattcttatgctttagttttcttaataa 157956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 307 - 386
Target Start/End: Complemental strand, 52755 - 52676
Alignment:
Q  307 aattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacat 386  Q
    |||||||||  ||||||||| ||||||||| |||||  |       ||||||||||||||||||||||||||||||||||    
T  52755 aattaaatgcgaattacatttaattttctctctcttctattttctccataatcaatagtcaatgaaaattgtttttacat 52676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 51; Significance: 6e-20; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 365 - 467
Target Start/End: Complemental strand, 5970 - 5868
Alignment:
Q  365 tcaatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatg 464  Q
    |||| |||||||||||||||||| ||||||||||||| |||||| || ||||||||||| |||| | |||| |  ||||||||| |||||||||||| ||    
T  5970 tcaaggaaaattgtttttacatcttcctataaaacttatttcaatgataacacaaaaaactatattacaaactactatgttttaattttcttaataagtg 5871  T
Q  465 tga 467  Q
    |||    
T  5870 tga 5868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 49; Significance: 9e-19; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 295 - 467
Target Start/End: Complemental strand, 233652 - 233480
Alignment:
Q  295 ttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatcctat 394  Q
    ||||||||||  ||||||||| ||||||||||||||| || | ||||| ||         ||||| |||| |||||||||| ||||||||||| ||| ||    
T  233652 ttattctcatgaaattaaatgcaaattacattcaattatcactctcttccattttctttttaatccatagccaatgaaaat-gtttttacatcttcccat 233554  T
Q  395 aaaacttttttcaaagaaaa-cacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgtga 467  Q
     |||||| ||| |||||||| |||||| || ||||  | |||||||||| ||||||||||||||||||||||||    
T  233553 gaaacttattttaaagaaaaacacaaataactatatattaaattcttatattttagttttcttaataaatgtga 233480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 294 - 442
Target Start/End: Original strand, 40174 - 40321
Alignment:
Q  294 tttattctcatagaattaaatgaaaattacattcaattttctccctctttcannnnnnncataatcaatagtcaatgaaaattgtttttacatcatccta 393  Q
    |||||||||||  ||||||||| ||||||||||||| |||||| ||| | ||        |||| |||||| |||||||||||||||||||| | | |||    
T  40174 tttattctcatgaaattaaatgcaaattacattcaactttctctctcatccattttttctataaccaatagccaatgaaaattgtttttacaactttcta 40273  T
Q  394 taaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttat 442  Q
    ||||| || || |||||||||||||||||  ||||| ||||||||||||    
T  40274 taaaatttattccaaagaaaacacaaaaagctatac-tcaaattcttat 40321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0330 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 366 - 467
Target Start/End: Original strand, 3235 - 3336
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgt 465  Q
    ||||| |||||||||||| ||| ||||||||||||| ||||||||| ||||||||||| |||  | |||| |  ||||||||| |||||||||||| |||    
T  3235 caatggaaattgtttttagatcttcctataaaacttatttcaaagataacacaaaaaactatgttacaaactactatgttttaattttcttaataagtgt 3334  T
Q  466 ga 467  Q
    ||    
T  3335 ga 3336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1786 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold1786
Description:

Target: scaffold1786; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 353 - 458
Target Start/End: Original strand, 901 - 997
Alignment:
Q  353 cataatcaatagtcaatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttt 452  Q
    ||||| |||||||||||||||||| |||||| ||| | ||||||||||| || ||||||||||         |||||||||||||||||||||||| |||    
T  901 cataaccaatagtcaatgaaaattatttttatatctttctataaaacttattccaaagaaaac---------tatacttcaaattcttatgttttaattt 991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0495 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0495
Description:

Target: scaffold0495; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 366 - 467
Target Start/End: Original strand, 4693 - 4794
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgt 465  Q
    |||||| |||| |||||||||| | | || |||||| |||||| || ||||| ||||||||||| ||||||   || || |||||||||||||||| |||    
T  4693 caatgagaattatttttacatctttcgatgaaacttatttcaaggagaacactaaaaattatacctcaaatcactaagtgttagttttcttaataagtgt 4792  T
Q  466 ga 467  Q
    ||    
T  4793 ga 4794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 366 - 467
Target Start/End: Complemental strand, 161013 - 160912
Alignment:
Q  366 caatgaaaattgtttttacatcatcctataaaacttttttcaaagaaaacacaaaaaattatacttcaaattcttatgttttagttttcttaataaatgt 465  Q
    |||||||||||||||||||| | | |||| |||||| |||||| || ||||||| ||| |||  | |||| |  ||||||||| |||||||||||| |||    
T  161013 caatgaaaattgtttttacaactttctatcaaacttatttcaaggataacacaagaaactatgttgcaaactactatgttttaattttcttaataagtgt 160914  T
Q  466 ga 467  Q
    ||    
T  160913 ga 160912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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