View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3436_low_1 (Length: 561)

Name: NF3436_low_1
Description: NF3436
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3436_low_1
NF3436_low_1
[»] chr8 (69 HSPs)
chr8 (87-327)||(7858454-7858694)
chr8 (87-261)||(34890168-34890342)
chr8 (87-327)||(7022397-7022637)
chr8 (87-259)||(26483526-26483698)
chr8 (87-261)||(43216341-43216515)
chr8 (87-261)||(36190764-36190938)
chr8 (91-327)||(41086384-41086621)
chr8 (87-261)||(34158284-34158459)
chr8 (113-261)||(13143756-13143904)
chr8 (113-261)||(31734107-31734255)
chr8 (89-260)||(8107613-8107784)
chr8 (88-261)||(24892830-24893006)
chr8 (101-261)||(16879400-16879560)
chr8 (87-259)||(29920262-29920434)
chr8 (106-261)||(35456038-35456192)
chr8 (87-187)||(13143939-13144040)
chr8 (94-261)||(28348603-28348769)
chr8 (101-261)||(15957919-15958081)
chr8 (87-201)||(16358106-16358219)
chr8 (87-245)||(30575828-30575987)
chr8 (87-261)||(8711868-8712038)
chr8 (101-238)||(35525602-35525737)
chr8 (87-259)||(8709780-8709950)
chr8 (90-261)||(15824634-15824799)
chr8 (87-261)||(7499718-7499881)
chr8 (88-188)||(41362302-41362402)
chr8 (87-161)||(2052955-2053029)
chr8 (89-188)||(8745648-8745747)
chr8 (87-190)||(33563501-33563608)
chr8 (87-188)||(17336807-17336908)
chr8 (87-188)||(34713594-34713695)
chr8 (87-188)||(38072228-38072329)
chr8 (87-259)||(4046887-4047060)
chr8 (87-188)||(8712589-8712690)
chr8 (87-188)||(17713288-17713389)
chr8 (8-56)||(17692300-17692348)
chr8 (93-139)||(11158675-11158721)
chr8 (142-188)||(26954441-26954487)
chr8 (87-199)||(44663786-44663895)
chr8 (87-188)||(2628158-2628259)
chr8 (87-188)||(3100019-3100120)
chr8 (131-188)||(8673446-8673503)
chr8 (93-158)||(12108251-12108316)
chr8 (131-188)||(25195085-25195141)
chr8 (87-188)||(35344433-35344534)
chr8 (87-188)||(44411203-44411304)
chr8 (87-139)||(7756685-7756737)
chr8 (87-143)||(40773397-40773453)
chr8 (162-254)||(3642039-3642130)
chr8 (132-187)||(4038920-4038975)
chr8 (88-187)||(28497133-28497232)
chr8 (149-195)||(2052892-2052938)
chr8 (88-197)||(34899981-34900090)
chr8 (87-188)||(27621196-27621297)
chr8 (87-188)||(27752652-27752753)
chr8 (213-261)||(13144081-13144129)
chr8 (93-188)||(6401685-6401780)
chr8 (138-189)||(14693433-14693484)
chr8 (93-175)||(37598148-37598230)
chr8 (145-261)||(41755918-41756033)
chr8 (87-137)||(45190700-45190750)
chr8 (218-259)||(2052830-2052871)
chr8 (87-188)||(5217457-5217557)
chr8 (87-188)||(11044123-11044224)
chr8 (87-188)||(24612474-24612575)
chr8 (87-188)||(31133023-31133124)
chr8 (87-188)||(35260123-35260224)
chr8 (87-188)||(35346298-35346399)
chr8 (87-188)||(44052687-44052788)
[»] chr7 (64 HSPs)
chr7 (87-327)||(18102457-18102698)
chr7 (87-324)||(46760249-46760487)
chr7 (87-261)||(6191039-6191213)
chr7 (87-327)||(14805798-14806037)
chr7 (87-327)||(15252792-15253031)
chr7 (93-261)||(25944570-25944738)
chr7 (87-259)||(45485951-45486123)
chr7 (87-360)||(19912761-19913034)
chr7 (87-327)||(35923180-35923419)
chr7 (87-259)||(25737619-25737791)
chr7 (87-261)||(4910627-4910799)
chr7 (106-261)||(20123691-20123846)
chr7 (87-195)||(12632336-12632444)
chr7 (87-259)||(22632085-22632257)
chr7 (87-261)||(44682872-44683045)
chr7 (87-259)||(47779600-47779772)
chr7 (118-261)||(47557622-47557767)
chr7 (87-201)||(16917525-16917639)
chr7 (93-259)||(14574560-14574726)
chr7 (87-187)||(35887961-35888061)
chr7 (101-261)||(11780012-11780171)
chr7 (131-200)||(35068885-35068954)
chr7 (87-186)||(37767011-37767110)
chr7 (93-188)||(40560444-40560539)
chr7 (87-188)||(10248595-10248698)
chr7 (93-259)||(15995715-15995882)
chr7 (131-189)||(31768998-31769056)
chr7 (87-181)||(33153108-33153202)
chr7 (87-179)||(2633329-2633421)
chr7 (218-327)||(12633110-12633219)
chr7 (93-188)||(3157498-3157593)
chr7 (140-261)||(9158084-9158204)
chr7 (101-201)||(48413772-48413867)
chr7 (93-188)||(48879450-48879545)
chr7 (89-187)||(39170602-39170700)
chr7 (87-188)||(43107856-43107957)
chr7 (93-188)||(41815650-41815745)
chr7 (272-361)||(47557924-47558013)
chr7 (131-201)||(31549939-31550009)
chr7 (87-188)||(19933006-19933107)
chr7 (87-188)||(23106515-23106616)
chr7 (87-188)||(32491058-32491159)
chr7 (87-188)||(35181254-35181355)
chr7 (87-188)||(41889233-41889334)
chr7 (87-188)||(44600508-44600609)
chr7 (113-261)||(2610586-2610734)
chr7 (92-143)||(19492390-19492441)
chr7 (93-188)||(19964151-19964246)
chr7 (153-200)||(24151640-24151687)
chr7 (87-181)||(35084052-35084146)
chr7 (87-181)||(42617740-42617834)
chr7 (94-188)||(47383468-47383562)
chr7 (87-188)||(7989259-7989360)
chr7 (87-188)||(9818530-9818631)
chr7 (87-188)||(10720455-10720556)
chr7 (87-188)||(18206270-18206371)
chr7 (87-188)||(22111281-22111382)
chr7 (87-188)||(29713256-29713357)
chr7 (87-188)||(38260383-38260484)
chr7 (87-188)||(40583207-40583308)
chr7 (149-201)||(4069057-4069109)
chr7 (87-162)||(4069253-4069331)
chr7 (221-261)||(35068961-35069001)
chr7 (93-188)||(45598966-45599062)
[»] chr1 (89 HSPs)
chr1 (87-261)||(15959633-15959807)
chr1 (87-327)||(32623998-32624239)
chr1 (87-327)||(39555579-39555819)
chr1 (87-327)||(43667296-43667533)
chr1 (95-327)||(12448969-12449200)
chr1 (87-327)||(2125965-2126206)
chr1 (93-261)||(7467961-7468130)
chr1 (87-261)||(45226132-45226306)
chr1 (87-259)||(35691388-35691560)
chr1 (87-261)||(33369547-33369718)
chr1 (87-261)||(6786832-6787006)
chr1 (88-261)||(6785450-6785622)
chr1 (87-259)||(24190466-24190637)
chr1 (93-261)||(42965815-42965981)
chr1 (87-261)||(28016739-28016911)
chr1 (87-261)||(28120748-28120922)
chr1 (87-261)||(32983165-32983337)
chr1 (87-261)||(40718672-40718846)
chr1 (88-261)||(47014487-47014657)
chr1 (87-201)||(11241081-11241195)
chr1 (91-261)||(46542978-46543146)
chr1 (88-261)||(47600030-47600206)
chr1 (87-261)||(13136547-13136717)
chr1 (87-261)||(33431555-33431727)
chr1 (98-261)||(39932576-39932739)
chr1 (93-260)||(46818501-46818668)
chr1 (87-261)||(3875012-3875188)
chr1 (93-261)||(1820409-1820577)
chr1 (87-247)||(24728619-24728780)
chr1 (87-199)||(52984989-52985101)
chr1 (98-201)||(3861699-3861802)
chr1 (87-259)||(3076291-3076463)
chr1 (106-261)||(2246026-2246181)
chr1 (106-261)||(37735395-37735550)
chr1 (87-201)||(44148829-44148943)
chr1 (88-162)||(4672924-4672998)
chr1 (95-201)||(30221779-30221885)
chr1 (87-201)||(32742195-32742309)
chr1 (87-195)||(1034917-1035023)
chr1 (87-188)||(50176589-50176690)
chr1 (134-258)||(10558796-10558920)
chr1 (112-261)||(25391678-25391824)
chr1 (87-243)||(7875933-7876091)
chr1 (87-188)||(30701378-30701479)
chr1 (145-256)||(16854139-16854250)
chr1 (87-188)||(7397773-7397874)
chr1 (87-188)||(35884274-35884375)
chr1 (87-188)||(45840059-45840159)
chr1 (89-201)||(47302903-47303012)
chr1 (87-236)||(50369981-50370118)
chr1 (87-189)||(35941903-35942005)
chr1 (87-188)||(43656033-43656134)
chr1 (87-188)||(52841438-52841539)
chr1 (93-188)||(25185302-25185398)
chr1 (87-201)||(32318553-32318667)
chr1 (87-188)||(5950506-5950610)
chr1 (126-188)||(8889729-8889791)
chr1 (91-201)||(298665-298776)
chr1 (135-200)||(5858412-5858477)
chr1 (87-188)||(15285866-15285967)
chr1 (146-199)||(15912254-15912307)
chr1 (131-188)||(16688203-16688260)
chr1 (139-261)||(23392211-23392332)
chr1 (87-188)||(23873823-23873924)
chr1 (87-188)||(25990811-25990912)
chr1 (87-188)||(37538876-37538977)
chr1 (87-188)||(38942437-38942538)
chr1 (131-188)||(43765361-43765418)
chr1 (131-200)||(44510256-44510325)
chr1 (87-188)||(46949384-46949485)
chr1 (87-188)||(51338891-51338991)
chr1 (149-188)||(13351747-13351786)
chr1 (94-165)||(13352184-13352255)
chr1 (93-188)||(35366202-35366297)
chr1 (87-181)||(26907087-26907181)
chr1 (154-260)||(6787050-6787155)
chr1 (131-188)||(16661583-16661639)
chr1 (87-188)||(28916511-28916612)
chr1 (87-188)||(40935609-40935710)
chr1 (87-188)||(49924482-49924583)
chr1 (221-261)||(11241037-11241077)
chr1 (118-188)||(18852286-18852356)
chr1 (87-188)||(35189264-35189366)
chr1 (87-201)||(36383978-36384092)
chr1 (87-181)||(39026242-39026336)
chr1 (93-183)||(46803670-46803760)
chr1 (219-261)||(50012585-50012627)
chr1 (87-188)||(40960470-40960571)
chr1 (93-141)||(18036654-18036702)
[»] chr5 (60 HSPs)
chr5 (87-327)||(11261877-11262117)
chr5 (87-261)||(20644008-20644182)
chr5 (87-259)||(6686380-6686553)
chr5 (88-261)||(34425325-34425497)
chr5 (87-327)||(43589955-43590195)
chr5 (87-327)||(37562754-37562995)
chr5 (87-261)||(42273643-42273815)
chr5 (87-257)||(20039100-20039270)
chr5 (97-327)||(37522592-37522823)
chr5 (113-261)||(32110996-32111144)
chr5 (93-261)||(43454322-43454490)
chr5 (94-261)||(38130113-38130283)
chr5 (87-259)||(25840860-25841032)
chr5 (91-258)||(19413138-19413305)
chr5 (133-261)||(38280841-38280969)
chr5 (87-259)||(17351384-17351556)
chr5 (87-201)||(23233465-23233579)
chr5 (99-201)||(41625517-41625618)
chr5 (93-188)||(12912294-12912388)
chr5 (109-261)||(8225457-8225608)
chr5 (106-247)||(42104262-42104401)
chr5 (112-200)||(5984126-5984214)
chr5 (150-261)||(32017698-32017808)
chr5 (87-247)||(4463368-4463526)
chr5 (87-259)||(39505225-39505397)
chr5 (131-189)||(8959706-8959764)
chr5 (101-188)||(16153353-16153439)
chr5 (96-166)||(32019910-32019980)
chr5 (87-187)||(5736233-5736333)
chr5 (87-147)||(12792779-12792839)
chr5 (93-188)||(8506498-8506593)
chr5 (87-261)||(9957428-9957583)
chr5 (93-200)||(30703656-30703763)
chr5 (93-199)||(32079560-32079666)
chr5 (91-188)||(3463814-3463909)
chr5 (131-188)||(5369068-5369125)
chr5 (96-188)||(1144493-1144585)
chr5 (87-147)||(12729878-12729937)
chr5 (213-261)||(12730099-12730147)
chr5 (140-187)||(104260-104307)
chr5 (151-259)||(7071234-7071342)
chr5 (93-188)||(13146794-13146889)
chr5 (93-188)||(29307186-29307281)
chr5 (87-188)||(24432393-24432494)
chr5 (87-188)||(25962441-25962542)
chr5 (131-188)||(28907136-28907192)
chr5 (131-188)||(28943531-28943587)
chr5 (87-188)||(31316794-31316895)
chr5 (87-188)||(31690613-31690714)
chr5 (209-261)||(5984230-5984282)
chr5 (87-187)||(8146006-8146106)
chr5 (87-143)||(30893243-30893299)
chr5 (153-188)||(10153987-10154022)
chr5 (222-261)||(12792929-12792968)
chr5 (87-201)||(24439624-24439738)
chr5 (87-188)||(12638954-12639055)
chr5 (87-188)||(16286076-16286177)
chr5 (218-258)||(104346-104386)
chr5 (93-201)||(8143986-8144094)
chr5 (87-143)||(36413929-36413985)
[»] scaffold0045 (1 HSPs)
scaffold0045 (87-327)||(77885-78125)
[»] chr4 (75 HSPs)
chr4 (87-326)||(47867806-47868045)
chr4 (87-260)||(4058708-4058881)
chr4 (87-326)||(41414597-41414834)
chr4 (87-327)||(2229173-2229413)
chr4 (87-261)||(20281583-20281757)
chr4 (87-261)||(29203498-29203672)
chr4 (87-327)||(26916251-26916491)
chr4 (87-261)||(17794527-17794701)
chr4 (87-327)||(14332685-14332926)
chr4 (87-327)||(28668987-28669226)
chr4 (87-261)||(20716172-20716346)
chr4 (87-238)||(7654632-7654783)
chr4 (87-261)||(5483264-5483438)
chr4 (87-261)||(39078149-39078322)
chr4 (93-238)||(16604838-16604983)
chr4 (87-261)||(10069689-10069863)
chr4 (87-253)||(24940365-24940531)
chr4 (93-261)||(56318062-56318230)
chr4 (87-261)||(55580661-55580836)
chr4 (87-261)||(1585335-1585507)
chr4 (91-261)||(35310732-35310902)
chr4 (87-197)||(21722668-21722778)
chr4 (93-173)||(16473828-16473908)
chr4 (53-187)||(5064607-5064741)
chr4 (88-259)||(42915523-42915695)
chr4 (95-188)||(32203278-32203371)
chr4 (87-259)||(48793616-48793784)
chr4 (91-247)||(32323252-32323407)
chr4 (124-247)||(5815475-5815598)
chr4 (87-188)||(28142608-28142709)
chr4 (87-259)||(8683292-8683462)
chr4 (87-259)||(14583723-14583895)
chr4 (87-147)||(50080442-50080502)
chr4 (87-188)||(32410393-32410494)
chr4 (95-188)||(46070517-46070609)
chr4 (127-188)||(49080322-49080383)
chr4 (87-143)||(12002619-12002675)
chr4 (100-188)||(47516190-47516278)
chr4 (107-201)||(32280009-32280103)
chr4 (131-189)||(29511489-29511547)
chr4 (87-188)||(8013075-8013176)
chr4 (91-188)||(17799124-17799221)
chr4 (87-188)||(29899775-29899876)
chr4 (93-261)||(52535589-52535745)
chr4 (87-247)||(19351852-19352018)
chr4 (124-247)||(50145742-50145864)
chr4 (94-163)||(17236262-17236331)
chr4 (87-188)||(29180371-29180472)
chr4 (167-261)||(35529664-35529758)
chr4 (87-188)||(28318408-28318504)
chr4 (167-259)||(25297288-25297380)
chr4 (87-181)||(5222252-5222346)
chr4 (91-141)||(7438760-7438810)
chr4 (87-189)||(9798034-9798136)
chr4 (87-189)||(38940928-38941030)
chr4 (87-188)||(30011913-30012014)
chr4 (87-188)||(30776443-30776544)
chr4 (87-188)||(30777547-30777648)
chr4 (87-188)||(32012286-32012387)
chr4 (87-188)||(37788511-37788612)
chr4 (131-188)||(37911949-37912006)
chr4 (87-188)||(39969948-39970049)
chr4 (87-188)||(50768505-50768606)
chr4 (87-188)||(53677438-53677539)
chr4 (87-188)||(53848525-53848626)
chr4 (88-188)||(5841766-5841866)
chr4 (91-143)||(52713160-52713212)
chr4 (113-195)||(31280253-31280329)
chr4 (136-182)||(8178274-8178320)
chr4 (87-188)||(3043126-3043227)
chr4 (87-188)||(10591462-10591563)
chr4 (155-188)||(23978169-23978202)
chr4 (87-135)||(4443086-4443133)
chr4 (92-144)||(31532444-31532496)
chr4 (87-147)||(51495250-51495310)
[»] chr3 (82 HSPs)
chr3 (87-261)||(47864189-47864363)
chr3 (87-259)||(50650989-50651161)
chr3 (87-260)||(14752160-14752333)
chr3 (87-259)||(37042369-37042541)
chr3 (87-261)||(7866435-7866609)
chr3 (87-261)||(54464848-54465021)
chr3 (93-327)||(23311551-23311785)
chr3 (93-360)||(11054269-11054533)
chr3 (87-261)||(46711610-46711783)
chr3 (87-327)||(36546474-36546714)
chr3 (87-327)||(36561601-36561841)
chr3 (93-261)||(37074956-37075126)
chr3 (87-261)||(6075079-6075253)
chr3 (87-261)||(28875404-28875578)
chr3 (87-261)||(35963150-35963324)
chr3 (87-259)||(30189570-30189743)
chr3 (87-261)||(579097-579264)
chr3 (113-261)||(6438081-6438229)
chr3 (87-261)||(50730107-50730281)
chr3 (87-261)||(50782573-50782747)
chr3 (54-194)||(9264616-9264756)
chr3 (88-261)||(19464073-19464248)
chr3 (93-260)||(26724949-26725116)
chr3 (87-327)||(23910465-23910687)
chr3 (87-195)||(31836983-31837091)
chr3 (95-261)||(53270231-53270398)
chr3 (87-259)||(2927289-2927462)
chr3 (87-188)||(41476287-41476389)
chr3 (87-261)||(8703107-8703277)
chr3 (87-261)||(9054994-9055164)
chr3 (101-258)||(20847235-20847391)
chr3 (93-261)||(32619787-32619956)
chr3 (87-201)||(29235245-29235359)
chr3 (87-259)||(26208014-26208186)
chr3 (87-188)||(10114976-10115077)
chr3 (87-188)||(10014334-10014435)
chr3 (87-188)||(10252076-10252177)
chr3 (93-188)||(22479012-22479107)
chr3 (87-201)||(47115907-47116021)
chr3 (87-198)||(33973518-33973630)
chr3 (87-247)||(8096970-8097130)
chr3 (87-188)||(31126276-31126377)
chr3 (88-185)||(47443927-47444023)
chr3 (96-188)||(3084141-3084233)
chr3 (153-254)||(34722623-34722724)
chr3 (131-259)||(3972275-3972402)
chr3 (131-259)||(3997476-3997603)
chr3 (94-188)||(22455967-22456061)
chr3 (168-259)||(47866946-47867036)
chr3 (87-184)||(25242130-25242227)
chr3 (87-188)||(34022663-34022764)
chr3 (91-179)||(17587779-17587867)
chr3 (87-187)||(21654310-21654410)
chr3 (87-188)||(38401445-38401550)
chr3 (170-247)||(38674882-38674959)
chr3 (87-201)||(8769531-8769643)
chr3 (135-188)||(16032987-16033040)
chr3 (131-188)||(21214306-21214363)
chr3 (87-188)||(31292676-31292777)
chr3 (87-188)||(34194953-34195054)
chr3 (87-188)||(55400802-55400903)
chr3 (209-261)||(48802554-48802606)
chr3 (87-201)||(8764631-8764743)
chr3 (97-183)||(30454687-30454773)
chr3 (87-201)||(30612229-30612343)
chr3 (87-188)||(37324038-37324140)
chr3 (87-184)||(46557122-46557219)
chr3 (87-181)||(51309484-51309578)
chr3 (131-187)||(6784390-6784446)
chr3 (209-261)||(33974633-33974685)
chr3 (91-187)||(51255251-51255347)
chr3 (171-259)||(46557237-46557325)
chr3 (153-188)||(54725628-54725663)
chr3 (219-261)||(41476413-41476455)
chr3 (91-141)||(46303689-46303739)
chr3 (87-157)||(46580630-46580700)
chr3 (87-188)||(28793226-28793327)
chr3 (87-188)||(36188961-36189062)
chr3 (91-188)||(45347672-45347769)
chr3 (135-188)||(46918213-46918266)
chr3 (87-188)||(49068115-49068216)
chr3 (209-261)||(9264006-9264058)
[»] chr2 (57 HSPs)
chr2 (87-327)||(6110191-6110433)
chr2 (87-261)||(19264093-19264268)
chr2 (87-327)||(41528184-41528425)
chr2 (87-324)||(45085188-45085425)
chr2 (87-261)||(45660359-45660536)
chr2 (87-261)||(3201320-3201494)
chr2 (93-327)||(28599146-28599381)
chr2 (87-259)||(35517119-35517291)
chr2 (88-261)||(33198624-33198797)
chr2 (94-261)||(28858303-28858473)
chr2 (87-261)||(12938236-12938410)
chr2 (87-259)||(11617020-11617192)
chr2 (87-261)||(24204521-24204695)
chr2 (87-188)||(43415468-43415569)
chr2 (87-261)||(6765925-6766100)
chr2 (87-259)||(29524033-29524205)
chr2 (113-261)||(14873956-14874105)
chr2 (87-259)||(25572042-25572213)
chr2 (87-259)||(9864710-9864881)
chr2 (93-246)||(5963210-5963362)
chr2 (87-187)||(35022967-35023066)
chr2 (93-261)||(33677477-33677645)
chr2 (93-256)||(8701601-8701764)
chr2 (87-261)||(7645219-7645396)
chr2 (87-187)||(40808712-40808811)
chr2 (87-188)||(26998384-26998485)
chr2 (89-259)||(30830590-30830760)
chr2 (87-188)||(32010169-32010270)
chr2 (87-187)||(35115795-35115896)
chr2 (117-261)||(40584422-40584564)
chr2 (93-188)||(38071062-38071157)
chr2 (87-188)||(4891630-4891732)
chr2 (93-188)||(32273738-32273837)
chr2 (91-259)||(44454987-44455153)
chr2 (91-199)||(32428029-32428138)
chr2 (90-181)||(9294725-9294816)
chr2 (143-189)||(16494974-16495020)
chr2 (87-182)||(33932915-33933010)
chr2 (88-188)||(4707488-4707585)
chr2 (87-178)||(11825351-11825438)
chr2 (87-188)||(792348-792449)
chr2 (135-200)||(9709568-9709633)
chr2 (87-188)||(14565365-14565466)
chr2 (87-188)||(18833902-18834003)
chr2 (87-188)||(21539820-21539921)
chr2 (101-159)||(5280536-5280595)
chr2 (87-150)||(15858681-15858744)
chr2 (87-181)||(4092081-4092175)
chr2 (87-188)||(10478241-10478342)
chr2 (131-176)||(20380202-20380247)
chr2 (87-188)||(28492583-28492684)
chr2 (87-188)||(38071442-38071543)
chr2 (87-188)||(38549635-38549736)
chr2 (101-189)||(44442197-44442286)
chr2 (87-188)||(44803961-44804062)
chr2 (93-181)||(8784465-8784553)
chr2 (87-187)||(35832476-35832576)
[»] chr6 (30 HSPs)
chr6 (87-327)||(21542346-21542586)
chr6 (93-259)||(11082244-11082410)
chr6 (87-327)||(35129047-35129288)
chr6 (91-327)||(3095717-3095954)
chr6 (87-259)||(34177634-34177806)
chr6 (87-259)||(7274868-7275040)
chr6 (91-260)||(30794189-30794358)
chr6 (87-261)||(12461422-12461596)
chr6 (87-201)||(14573121-14573234)
chr6 (87-154)||(9428846-9428913)
chr6 (125-261)||(31107185-31107320)
chr6 (87-189)||(15830759-15830861)
chr6 (87-188)||(4032052-4032156)
chr6 (131-188)||(16524444-16524501)
chr6 (87-261)||(17751737-17751911)
chr6 (87-183)||(5822027-5822123)
chr6 (131-188)||(4988008-4988065)
chr6 (131-188)||(16013469-16013526)
chr6 (94-188)||(17598356-17598450)
chr6 (87-197)||(21964011-21964121)
chr6 (87-188)||(5881746-5881846)
chr6 (87-188)||(10227975-10228076)
chr6 (134-186)||(3888494-3888546)
chr6 (153-188)||(5300659-5300694)
chr6 (118-188)||(30949198-30949268)
chr6 (87-188)||(374162-374263)
chr6 (87-176)||(5121449-5121538)
chr6 (87-187)||(17721802-17721902)
chr6 (87-187)||(30766510-30766610)
chr6 (87-187)||(32882684-32882784)
[»] scaffold0442 (1 HSPs)
scaffold0442 (93-261)||(10039-10207)
[»] scaffold0300 (1 HSPs)
scaffold0300 (87-259)||(566-738)
[»] scaffold0062 (1 HSPs)
scaffold0062 (87-261)||(44764-44938)
[»] scaffold0018 (1 HSPs)
scaffold0018 (91-324)||(154792-155024)
[»] scaffold0132 (2 HSPs)
scaffold0132 (87-261)||(1006-1180)
scaffold0132 (87-261)||(8966-9140)
[»] scaffold0774 (1 HSPs)
scaffold0774 (113-261)||(3447-3595)
[»] scaffold0009 (2 HSPs)
scaffold0009 (93-259)||(157790-157956)
scaffold0009 (168-247)||(52676-52755)
[»] scaffold0565 (1 HSPs)
scaffold0565 (87-189)||(5868-5970)
[»] scaffold0005 (1 HSPs)
scaffold0005 (87-259)||(233480-233652)
[»] scaffold0111 (1 HSPs)
scaffold0111 (112-260)||(40174-40321)
[»] scaffold0330 (1 HSPs)
scaffold0330 (87-188)||(3235-3336)
[»] scaffold1786 (1 HSPs)
scaffold1786 (96-201)||(901-997)
[»] scaffold0495 (1 HSPs)
scaffold0495 (87-188)||(4693-4794)
[»] scaffold0010 (1 HSPs)
scaffold0010 (87-188)||(160912-161013)


Alignment Details
Target: chr8 (Bit Score: 131; Significance: 1e-67; HSPs: 69)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 87 - 327
Target Start/End: Complemental strand, 7858694 - 7858454
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    |||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||    
T  7858694 tcacatttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttatttgaaaaaagttttataggaagatgtaaaaacaattttcat 7858595  T
Q  187 tgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaacnnnnnnnntattgaaaaagataaaa 286  Q
    |||| ||||||||||       |||||||| |||||||||||| ||||||| ||||||||| |||||||||||||        | ||| |||||||||||    
T  7858594 tgaccattgattatggaaaaaatgaaagagagagaaaattgaaagtaatttgcatttaattttatgagaataaacaaaaaaaatcttggaaaagataaaa 7858495  T
Q  287 gtttgtcnnnnnnncttatattttgggacaaagaaaatgtg 327  Q
    |||||||       |||||||||||||||||||||||||||    
T  7858494 gtttgtcttttttgcttatattttgggacaaagaaaatgtg 7858454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 87 - 261
Target Start/End: Original strand, 34890168 - 34890342
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||    
T  34890168 tcacacttattaagaaaactaaaacataagaatttggagtataattttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 34890267  T
Q  187 tgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaac 261  Q
    || |||||| |||||       |||||||| |||||||||||||||||||| ||||||||| |||||||||||||    
T  34890268 tggctattggttatggaaaaaatgaaagagagagaaaattgaatgtaatttgcatttaattttatgagaataaac 34890342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 87 - 327
Target Start/End: Original strand, 7022397 - 7022637
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||||||||||||||||||||||||||| |||||| |||||| ||||||||||||||||||||||||||||||||||| ||| |||||| |||||||||    
T  7022397 tcacatttattaagaaaactaaaacataaaaatttggagtatagttttttgtgttttctttgaaaaaagttttataggaagatataaaaataattttcat 7022496  T
Q  187 tgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaacnnnnnnnntattgaaaaagataaaa 286  Q
    || |||||| |||||       |||||||  |||||||||||||||||||| ||||||||| |||||||||||          | |||||||||||||||    
T  7022497 tggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataacaaaaaaaaatcttgaaaaagataaaa 7022596  T
Q  287 gtttgtcnnnnnnncttatattttgggacaaagaaaatgtg 327  Q
    |||||||       |||||||||||||||||||||||||||    
T  7022597 gtttgtcttttttgcttatattttgggacaaagaaaatgtg 7022637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 87 - 259
Target Start/End: Complemental strand, 26483698 - 26483526
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  26483698 tcacacttattaagaaaactaaaacataagaatttgaagtatagttttttgtgttttctttgaaaaaagttttatagggagatgtaaaaacaattttcat 26483599  T
Q  187 tgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataa 259  Q
    || ||||||||||||       |||||||  |||||||||||||||||||| ||||||||| || ||||||||    
T  26483598 tggctattgattatggaaaaaatgaaagaaagagaaaattgaatgtaatttacatttaattttacgagaataa 26483526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 87 - 261
Target Start/End: Original strand, 43216341 - 43216515
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  43216341 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaattttcat 43216440  T
Q  187 tgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaac 261  Q
    | ||||||| |||||       |||||||| || |||||| |||||||||| ||||||||| |||||||||||||    
T  43216441 tcactattggttatggagaaaatgaaagagagataaaattaaatgtaatttgcatttaattttatgagaataaac 43216515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 87 - 261
Target Start/End: Complemental strand, 36190938 - 36190764
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| || ||||||||||||||||||||||||||  |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  36190938 tcacacttgttaagaaaactaaaacataagaatttagagtatagttttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaattttcat 36190839  T
Q  187 tgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaac 261  Q
    || |||||| |||||       | |||||| |||||||||||||||||||| ||||||||| |||||||||||||    
T  36190838 tggctattggttatggaaaaaataaaagagagagaaaattgaatgtaatttgcatttaattttatgagaataaac 36190764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 91 - 327
Target Start/End: Original strand, 41086384 - 41086621
Alignment:
Q  91 atttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattgac 190  Q
    |||||||||||||||||||  |||| |||||||| |||| ||||||||||||||||||||||||||||||||  | |||||||||||||||||||||| |    
T  41086384 atttattaagaaaactaaataataaaaatttgaattatagttttttgtgttttctttgaaaaaagttttatataaagatgtaaaaacaattttcattggc 41086483  T
Q  191 tattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaacnnnnnnnntattgaaaaagataaaagttt 290  Q
    ||||| | |||       | ||| || ||||||||| |||||||||| ||||||||| |||||||||||||        | |||||||||||||||||||    
T  41086484 tattggtaatggaaaaaataaaacagagagaaaattcaatgtaatttgcatttaattttatgagaataaacaaaaaaaatcttgaaaaagataaaagttt 41086583  T
Q  291 gtc-nnnnnnncttatattttgggacaaagaaaatgtg 327  Q
    |||        |||||||||||||||||||||||||||    
T  41086584 gtctttttttgcttatattttgggacaaagaaaatgtg 41086621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 87 - 261
Target Start/End: Original strand, 34158284 - 34158459
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaa-aagttttataggatgatgtaaaaacaattttca 185  Q
    |||||||||||||||||| |||||||||||||| || |||||| ||| ||||||||||||| |||| ||||||||||||| |||||||||||||||||||    
T  34158284 tcacatttattaagaaaattaaaacataagaatctggagtatagtttgttgtgttttctttaaaaaaaagttttataggaagatgtaaaaacaattttca 34158383  T
Q  186 ttgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaac 261  Q
    |||||||||| |||||         |||||| |||||||||||||||||||| ||||||||| ||||| |||||||    
T  34158384 ttgactattggttatgaaaaaaacaaaagagagagaaaattgaatgtaatttgcatttaattttatgataataaac 34158459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 113 - 261
Target Start/End: Complemental strand, 13143904 - 13143756
Alignment:
Q  113 taagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattgactattgattatgnnnnnnntgaa 212  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| |||||| |||||||||||||||||||||| || ||| || ||       ||||    
T  13143904 taagaatttgaagtataattttttgtgttttcgttgaaaaaagtttcataggaagatgtaaaaacaattttcattggctgttggttgtgggaaaaatgaa 13143805  T
Q  213 agagggagaaaattgaatgtaattttcatttaattctatgagaataaac 261  Q
    |||| || ||||||||||||||||| ||||||||| |||||||||||||    
T  13143804 agagagaaaaaattgaatgtaatttgcatttaattttatgagaataaac 13143756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 113 - 261
Target Start/End: Complemental strand, 31734255 - 31734107
Alignment:
Q  113 taagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattgactattgattatgnnnnnnntgaa 212  Q
    |||||||||| |||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| ||||||  ||||       ||||    
T  31734255 taagaatttggagtatagttttttgtgttttctttgaaaaaagttttataggaagatataaaaacaattttcattggctattggatatggaaaaaatgaa 31734156  T
Q  213 agagggagaaaattgaatgtaattttcatttaattctatgagaataaac 261  Q
    |||| |||||||||||||||||||| |||||||||  ||||||||||||    
T  31734155 agagagagaaaattgaatgtaatttgcatttaatttgatgagaataaac 31734107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 89 - 260
Target Start/End: Original strand, 8107613 - 8107784
Alignment:
Q  89 acatttattaagaaaactaaaacataagaatttgaagtataatttttt-gtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcatt 187  Q
    ||||||||||| |||| ||||| ||||||||||| |||||| |||||| || ||||||||||||||||||||| |  |||||||||||||||||||||||    
T  8107613 acatttattaaaaaaattaaaatataagaatttggagtatagtttttttgtattttctttgaaaaaagttttacaatatgatgtaaaaacaattttcatt 8107712  T
Q  188 gactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaa 260  Q
    | |||||| |||||       |||||||| |||||||||||||||||||| ||||||||| ||||||||||||    
T  8107713 ggctattggttatg-gataaatgaaagagagagaaaattgaatgtaatttgcatttaattttatgagaataaa 8107784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 88 - 261
Target Start/End: Complemental strand, 24893006 - 24892830
Alignment:
Q  88 cacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgat---gtaaaaacaattttc 184  Q
    |||| |||||||||||||| ||||||||||||||  |||||| |||||||||||||||||| |||| ||||||||||| |||    ||||||||||||||    
T  24893006 cacacttattaagaaaacttaaacataagaatttagagtatagttttttgtgttttctttggaaaacgttttataggaggatataataaaaacaattttc 24892907  T
Q  185 attgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaac 261  Q
    |||| |||||| |||||       ||||||||  ||||||||||||||||||| ||||||||| |||||||||||||    
T  24892906 attggctattggttatggaaaaaatgaaagagatagaaaattgaatgtaatttgcatttaattttatgagaataaac 24892830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 101 - 261
Target Start/End: Original strand, 16879400 - 16879560
Alignment:
Q  101 aaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattgactattgattat 200  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||| || ||| || |||  |||||||||||||||| ||||||||||||||||    
T  16879400 aaaactaaaatataagaatttgaagtataattttttgtgttttctttgaaataaatttcatgggaatatgtaaaaacaatttttattgactattgattat 16879499  T
Q  201 gnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaac 261  Q
    |       |||||||| |||||||||||||||| |||  ||||||||  || |||||||||    
T  16879500 ggtgaaaatgaaagagagagaaaattgaatgtagtttgtatttaatttcataagaataaac 16879560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 87 - 259
Target Start/End: Original strand, 29920262 - 29920434
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| || |||||| || ||| ||||||||||||||||||||    
T  29920262 tcacacttattaagaaaactaaaacataagaatttgaagtacaattttttgtgttatctttggaataagtttcatgggaagatgtaaaaacaattttcat 29920361  T
Q  187 tgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataa 259  Q
    || ||||||||||||       |  ||||| | |||||||||||||||||   ||||||||  ||||||||||    
T  29920362 tggctattgattatggacaaaatagaagagagggaaaattgaatgtaattggtatttaatttcatgagaataa 29920434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 106 - 261
Target Start/End: Original strand, 35456038 - 35456192
Alignment:
Q  106 taaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattgactattgattatgnnnn 205  Q
    |||||||||||||||||||||||| |||||| |||||| |||| |||||||||||||| | |||||||||||||||||||||| ||||| ||||||        
T  35456038 taaaacataagaatttgaagtatagttttttatgttttttttg-aaaaagttttatagaaagatgtaaaaacaattttcattggctattaattatggaaa 35456136  T
Q  206 nnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaac 261  Q
       | |||||| ||||||| |||||||||||| ||||||||| |||||||||||||    
T  35456137 aaataaaagagagagaaaaatgaatgtaatttacatttaattttatgagaataaac 35456192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 87 - 187
Target Start/End: Original strand, 13143939 - 13144040
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttg-aaaaaagttttataggatgatgtaaaaacaattttca 185  Q
    ||||| |||||||||||||||||||||||||||||| |||||| |||||||||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  13143939 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttgaaaaaaagttttataggaagatgtaaaaacaattttca 13144038  T
Q  186 tt 187  Q
    ||    
T  13144039 tt 13144040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 94 - 261
Target Start/End: Complemental strand, 28348769 - 28348603
Alignment:
Q  94 tattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattgactat 193  Q
    ||||| |||||  |||||||||||||||| |||||| | |||||| ||||||||| ||||||||||||||||  ||||||||||||||| ||||| ||||    
T  28348769 tattacgaaaataaaaacataagaatttggagtatagtattttgtattttctttggaaaaagttttataggaatatgtaaaaacaatttccattggctat 28348670  T
Q  194 tgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaac 261  Q
    || |||||       |||||||| |||||||||||||||||||| ||||||||| |||||||||||||    
T  28348669 tggttatg-gaaaaatgaaagagagagaaaattgaatgtaatttgcatttaattttatgagaataaac 28348603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 101 - 261
Target Start/End: Original strand, 15957919 - 15958081
Alignment:
Q  101 aaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattgactattgattat 200  Q
    |||||||||| ||||||| ||| |||||| ||| |||||||||||||||||||||||||||||||  | ||||||||||||||||||  |||||| ||||    
T  15957919 aaaactaaaatataagaaattggagtatagtttattgtgttttctttgaaaaaagttttataggaataagtaaaaacaattttcatttgctattggttat 15958018  T
Q  201 gnnnnnnntgaa--agagggagaaaattgaatgtaattttcatttaattctatgagaataaac 261  Q
    |       ||||  |||| |||||||||||||||||||| ||||||||| |||||||||||||    
T  15958019 ggaaaaaatgaaagagagagagaaaattgaatgtaatttgcatttaattttatgagaataaac 15958081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 87 - 201
Target Start/End: Original strand, 16358106 - 16358219
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||| ||||| |||| ||||||||||||| |||||| ||||||||||| ||||||||| |||||| ||||||||| ||||||||||    
T  16358106 tcacacttattaagaaaattaaaatataaaaatttgaagtatagttttttttgttttctttg-aaaaagtttcataggaagatgtaaaatcaattttcat 16358204  T
Q  187 tgactattgattatg 201  Q
    |||||||||||||||    
T  16358205 tgactattgattatg 16358219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 87 - 245
Target Start/End: Original strand, 30575828 - 30575987
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaag-ttttataggatgatgtaaaaacaattttca 185  Q
    ||||| ||||||||||||||||||||||| |||||| |||| | ||||||||||||||||| ||||||| ||||| ||||  ||||||||||||||||||    
T  30575828 tcacacttattaagaaaactaaaacataaaaatttggagtaaagttttttgtgttttctttaaaaaaagtttttacaggaaaatgtaaaaacaattttca 30575927  T
Q  186 ttgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaa 245  Q
    ||| |||||| |||||       |||||||| ||||||||| || ||||||| |||||||    
T  30575928 ttggctattggttatggaaaaaatgaaagagagagaaaattaaaagtaatttgcatttaa 30575987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 87 - 261
Target Start/End: Complemental strand, 8712038 - 8711868
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| ||||||| ||||||||||||||    |||| |||||| ||||||||||||| |||| |||||||||||||||| |||||||||| |||||||||    
T  8712038 tcacacttattaaaaaaactaaaacata----tttggagtatagttttttgtgtttt-tttggaaaaagttttataggaagatgtaaaaataattttcat 8711944  T
Q  187 tgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaa-ttctatgagaataaac 261  Q
    || |||||| |||||       | |||||| |||||||||||||||||||| ||||||| || |||||||||||||    
T  8711943 tggctattggttatggaaaaaattaaagagagagaaaattgaatgtaatttgcatttaatttttatgagaataaac 8711868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 101 - 238
Target Start/End: Complemental strand, 35525737 - 35525602
Alignment:
Q  101 aaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattgactattgattat 200  Q
    |||||||||||||||||||||  |||||| ||||  |||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||    
T  35525737 aaaactaaaacataagaatttagagtatagtttt--gtgttttctttgaaaaaagttttacaggaagatgtaaaaacaattttcattgactattggttat 35525640  T
Q  201 gnnnnnnntgaaagagggagaaaattgaatgtaatttt 238  Q
    |       | |||||| ||||||||| |||||||||||    
T  35525639 ggaaaaaataaaagagagagaaaatttaatgtaatttt 35525602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 87 - 259
Target Start/End: Original strand, 8709780 - 8709950
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| ||| ||| |||||||||||||||||||||| |||||| ||||||||||||||||||||| |||| | || ||| || ||||||||| |||||||    
T  8709780 tcacacttaataaaaaaactaaaacataagaatttggagtatagttttttgtgttttctttgaaataagtctcatgggaagaagtaaaaacatttttcat 8709879  T
Q  187 tgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataa 259  Q
    |||||||   |||||       |  ||||  |||||||||||||||||||| ||||||||| |||||||||||    
T  8709880 tgactatatgttatggagaaaatagaaga--gagaaaattgaatgtaatttgcatttaattttatgagaataa 8709950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 90 - 261
Target Start/End: Original strand, 15824634 - 15824799
Alignment:
Q  90 catttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattga 189  Q
    |||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||  || |||||| || | | ||||||||||||      ||||     
T  15824634 catttagtaagaaaactaaaacataagaatttgaagtatagttttttgtgttttctttagaataagtttcatggaaagatgtaaaaaca------attgg 15824727  T
Q  190 ctattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaac 261  Q
    |||||| |||||       || ||||| ||||||||| ||||||||||||||||||||  ||||||||||||    
T  15824728 ctattggttatgaaaaaaatggaagagagagaaaatttaatgtaattttcatttaatttcatgagaataaac 15824799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 87 - 261
Target Start/End: Complemental strand, 7499881 - 7499718
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    |||||||||||||||||||||||||||| ||||||  ||||||| |||||| |||||||||||||            || ||||||||||||||||||||    
T  7499881 tcacatttattaagaaaactaaaacataggaatttagagtataactttttgcgttttctttgaaa------------gaagatgtaaaaacaattttcat 7499794  T
Q  187 tgactattgattat-gnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaac 261  Q
    || |||||| |||| |       |||||||| |||||||||||||||||||| ||||||||| |||||||||||||    
T  7499793 tggctattggttatggaaaaaaatgaaagagagagaaaattgaatgtaatttacatttaattttatgagaataaac 7499718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 88 - 188
Target Start/End: Original strand, 41362302 - 41362402
Alignment:
Q  88 cacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcatt 187  Q
    |||||||||||||||||||||||||||  | |||| |  ||| ||||||||||| ||||||||| ||||||||||||| |||||||||||||||||||||    
T  41362302 cacatttattaagaaaactaaaacatagtagtttgtaacatagttttttgtgttatctttgaaataagttttataggaagatgtaaaaacaattttcatt 41362401  T
Q  188 g 188  Q
    |    
T  41362402 g 41362402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 87 - 161
Target Start/End: Complemental strand, 2053029 - 2052955
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttat 161  Q
    ||||| ||||||||||||||||||||||| |||| ||||||||||||||||||||||||||  || |||||||||    
T  2053029 tcacacttattaagaaaactaaaacataataattagaagtataattttttgtgttttctttagaataagttttat 2052955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 89 - 188
Target Start/End: Complemental strand, 8745747 - 8745648
Alignment:
Q  89 acatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattg 188  Q
    ||||||||||||||||||||||||||  | |||| |  ||| ||| ||||||| |  |||||| ||||||||||||| ||||||||||||||||||||||    
T  8745747 acatttattaagaaaactaaaacatagtagtttgcaacatagtttcttgtgttattcttgaaataagttttataggaagatgtaaaaacaattttcattg 8745648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 87 - 190
Target Start/End: Original strand, 33563501 - 33563608
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttg----aaaaaagttttataggatgatgtaaaaacaattt 182  Q
    |||||||||||||||||| |||||||||||||||| || ||| | ||||||| |||| |||     ||| ||||||||| ||| ||||||||||||||||    
T  33563501 tcacatttattaagaaaattaaaacataagaatttaaaatattactttttgtatttttttttttttaaataagttttatgggaagatgtaaaaacaattt 33563600  T
Q  183 tcattgac 190  Q
    ||||||||    
T  33563601 tcattgac 33563608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 87 - 188
Target Start/End: Complemental strand, 17336908 - 17336807
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||||||||| |||  | |||| |  ||| ||||||||||  ||||||||| || |||||||||| ||||||||||||||||||||    
T  17336908 tcacacttattaagaaaactaaaatatagtagtttgtaacatagttttttgtgtcatctttgaaataaattttataggaagatgtaaaaacaattttcat 17336809  T
Q  187 tg 188  Q
    ||    
T  17336808 tg 17336807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 87 - 188
Target Start/End: Complemental strand, 34713695 - 34713594
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    |||||||||||||||||||||| || ||   |||||| |||||||||||||||||||  |||||| ||||||| ||| | |||||||||| |||| ||||    
T  34713695 tcacatttattaagaaaactaatacttagtgatttgaggtataattttttgtgtttttcttgaaataagttttctagaaagatgtaaaaataattctcat 34713596  T
Q  187 tg 188  Q
    ||    
T  34713595 tg 34713594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 87 - 188
Target Start/End: Complemental strand, 38072329 - 38072228
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||||||||||||||||||||||||||  | |||| |  ||| ||||||||||| ||||||||  ||||||||||  |  |||||||||||||||||||    
T  38072329 tcacatttattaagaaaactaaaacatagtagtttgtaacatagttttttgtgttatctttgaattaagttttataaaaaaatgtaaaaacaattttcat 38072230  T
Q  187 tg 188  Q
    ||    
T  38072229 tg 38072228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 87 - 259
Target Start/End: Original strand, 4046887 - 4047060
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttt-tgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttca 185  Q
    ||||| |||||||||||| ||||  ||||||||||| || ||| ||||| ||||||||||||  || |||||| || | |  ||||||||| ||||||||    
T  4046887 tcacacttattaagaaaattaaagtataagaatttgtagcatagtttttgtgtgttttctttataataagtttcatggaaatatgtaaaaataattttca 4046986  T
Q  186 ttgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataa 259  Q
    ||| | |||| |||||       | |||||| ||||||||| |||||||||| |||||||||  ||||||||||    
T  4046987 ttggcaattggttatggaaaaaataaaagagagagaaaattaaatgtaatttgcatttaatttcatgagaataa 4047060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 87 - 188
Target Start/End: Complemental strand, 8712690 - 8712589
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||||||||||||||||||||||||||  || ||| ||| || ||| ||||||| |  ||| || ||||||||||| | ||||||||||||||||| ||    
T  8712690 tcacatttattaagaaaactaaaacatagtaacttgcagtttagtttcttgtgttattattggaataagttttatagaaagatgtaaaaacaatttttat 8712591  T
Q  187 tg 188  Q
    ||    
T  8712590 tg 8712589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 87 - 188
Target Start/End: Complemental strand, 17713389 - 17713288
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| ||||||| ||||||||||||||  | |||| |  ||| ||| ||||||| || |||||| ||||||||||||| ||| ||||||||||||||||    
T  17713389 tcacacttattaaaaaaactaaaacatagtattttgcaacatagtttcttgtgttatccttgaaataagttttataggaagatttaaaaacaattttcat 17713290  T
Q  187 tg 188  Q
    ||    
T  17713289 tg 17713288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 8 - 56
Target Start/End: Complemental strand, 17692348 - 17692300
Alignment:
Q  8 tagcaaaggtgatggatttaggtttcacatagttgagaaatttattact 56  Q
    ||||||| |||||||||||||||||||||||||||||||||||| ||||    
T  17692348 tagcaaaagtgatggatttaggtttcacatagttgagaaatttagtact 17692300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 93 - 139
Target Start/End: Complemental strand, 11158721 - 11158675
Alignment:
Q  93 ttattaagaaaactaaaacataagaatttgaagtataattttttgtg 139  Q
    |||||||||||||||||||||||||||||| | ||||||||||||||    
T  11158721 ttattaagaaaactaaaacataagaatttggaatataattttttgtg 11158675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 142 - 188
Target Start/End: Original strand, 26954441 - 26954487
Alignment:
Q  142 ttctttgaaaaaagttttataggatgatgtaaaaacaattttcattg 188  Q
    |||||||||| ||||||||||||| ||||||||||||||||||||||    
T  26954441 ttctttgaaataagttttataggaagatgtaaaaacaattttcattg 26954487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 87 - 199
Target Start/End: Original strand, 44663786 - 44663895
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||||||||  ||||||||||  |||||| |||   |||||||||||| || || |||||| | | |||||||||| |||||| ||    
T  44663786 tcacacttattaagaaaactaaattataagaatttagagtatagttt---gtgttttctttggaataaattttatggaaagatgtaaaaataatttttat 44663882  T
Q  187 tgactattgatta 199  Q
    || ||||||||||    
T  44663883 tggctattgatta 44663895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 87 - 188
Target Start/End: Original strand, 2628158 - 2628259
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| ||||||||||||| ||||||||  | |||| |  ||| ||| ||||||| || || ||| ||||||||||||| |||||||||| |||||||||    
T  2628158 tcacacttattaagaaaaccaaaacatagtagtttgcaacatagtttcttgtgttatccttaaaataagttttataggaagatgtaaaaataattttcat 2628257  T
Q  187 tg 188  Q
    ||    
T  2628258 tg 2628259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 87 - 188
Target Start/End: Complemental strand, 3100120 - 3100019
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||||||| || |||  |||||| ||||||||||||||||| || ||| || |||||| || | | |||||||||| |||| ||||    
T  3100120 tcacacttattaagaaaactaacacttaatgatttgaggtataattttttgtgttctcgttggaataagtttcatggaaagatgtaaaaataattctcat 3100021  T
Q  187 tg 188  Q
    ||    
T  3100020 tg 3100019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 131 - 188
Target Start/End: Complemental strand, 8673503 - 8673446
Alignment:
Q  131 ttttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattg 188  Q
    ||||||||||| | ||||||| |||||||||| || ||||||||||||||||||||||    
T  8673503 ttttttgtgttatatttgaaataagttttataagaagatgtaaaaacaattttcattg 8673446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 93 - 158
Target Start/End: Complemental strand, 12108316 - 12108251
Alignment:
Q  93 ttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttt 158  Q
    |||||||||||||||| |  ||  ||||||||||||||||||||||||| ||||||||| ||||||    
T  12108316 ttattaagaaaactaacatttagtaatttgaagtataattttttgtgttatctttgaaataagttt 12108251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 131 - 188
Target Start/End: Original strand, 25195085 - 25195141
Alignment:
Q  131 ttttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattg 188  Q
    ||||||||||| ||||||||| || |||||||||| ||||||||||||||||||||||    
T  25195085 ttttttgtgttatctttgaaataa-ttttataggaagatgtaaaaacaattttcattg 25195141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 87 - 188
Target Start/End: Complemental strand, 35344534 - 35344433
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||||||| || ||   |||||| ||||||||||||||||| || |||||| |||||| || | | |||||||||| |||| ||||    
T  35344534 tcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttgaaataagtttcatggaaagatgtaaaaataattctcat 35344435  T
Q  187 tg 188  Q
    ||    
T  35344434 tg 35344433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 87 - 188
Target Start/End: Original strand, 44411203 - 44411304
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||||||| || ||   ||||||||||||||||||||| || || |||||| |||||| || | | |||||||||| |||| ||||    
T  44411203 tcacacttattaagaaaactaacacttagtgatttgaagtataattttttgtattctccttgaaataagtttcatggaaagatgtaaaaataattctcat 44411302  T
Q  187 tg 188  Q
    ||    
T  44411303 tg 44411304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 87 - 139
Target Start/End: Complemental strand, 7756737 - 7756685
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtg 139  Q
    ||||||||||||||||| |||||||| || |||||||||||||| ||||||||    
T  7756737 tcacatttattaagaaacctaaaacacaataatttgaagtataactttttgtg 7756685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 87 - 143
Target Start/End: Original strand, 40773397 - 40773453
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgtttt 143  Q
    ||||||||||||| |||||||||| |||| |||||| ||||||||||| ||||||||    
T  40773397 tcacatttattaaaaaaactaaaatataacaatttggagtataattttgtgtgtttt 40773453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 162 - 254
Target Start/End: Original strand, 3642039 - 3642130
Alignment:
Q  162 aggatgatgtaaaaacaattttcattgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgag 254  Q
    |||| ||||||||||||||||| |||| |||||| |||||       |||||||| |||||||||||||||||||| ||||| ||| ||||||    
T  3642039 aggaagatgtaaaaacaatttt-attggctattggttatggaaaaaatgaaagagagagaaaattgaatgtaatttgcattttattttatgag 3642130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 132 - 187
Target Start/End: Original strand, 4038920 - 4038975
Alignment:
Q  132 tttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcatt 187  Q
    |||||||||| | ||||||| |||||||||| || |||||||||||||||||||||    
T  4038920 tttttgtgttatttttgaaataagttttatatgaagatgtaaaaacaattttcatt 4038975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 88 - 187
Target Start/End: Original strand, 28497133 - 28497232
Alignment:
Q  88 cacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcatt 187  Q
    |||||||||||||||||  |||| |||  | |||| |  ||| ||| ||||||| || |||||| ||||||||| ||| |||||||||||||||||||||    
T  28497133 cacatttattaagaaaataaaaatatagtagtttgcaacatagtttcttgtgttatccttgaaataagttttatgggaagatgtaaaaacaattttcatt 28497232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 149 - 195
Target Start/End: Complemental strand, 2052938 - 2052892
Alignment:
Q  149 aaaaaagttttataggatgatgtaaaaacaattttcattgactattg 195  Q
    ||||||||||||| ||| |||||||||||||||||||||| ||||||    
T  2052938 aaaaaagttttatgggaagatgtaaaaacaattttcattggctattg 2052892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 88 - 197
Target Start/End: Complemental strand, 34900090 - 34899981
Alignment:
Q  88 cacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgtt-ttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    |||| ||||||||||||||||||||||| ||||||   |||| |||||||||||  |||| | || ||||||||||||| ||| |||||| |||||| ||    
T  34900090 cacacttattaagaaaactaaaacataataatttgcgatatatttttttgtgttcctcttag-aataagttttataggaggatttaaaaataattttgat 34899992  T
Q  187 tgactattgat 197  Q
    ||  |||||||    
T  34899991 tggttattgat 34899981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 87 - 188
Target Start/End: Complemental strand, 27621297 - 27621196
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||||||| || ||   |||||||||||||||||||||||| |  ||| || |||||| || | | |||||||||| |||| ||||    
T  27621297 tcacacttattaagaaaactaacacttagtgatttgaagtataattttttgtgttctacttggaataagtttcatggaaagatgtaaaaataattctcat 27621198  T
Q  187 tg 188  Q
    ||    
T  27621197 tg 27621196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 87 - 188
Target Start/End: Complemental strand, 27752753 - 27752652
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||||||| || ||   |||||| ||||||||||||||||| || ||| || |||||| || | | |||||||||| |||| ||||    
T  27752753 tcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaataagtttcatggaaagatgtaaaaataattctcat 27752654  T
Q  187 tg 188  Q
    ||    
T  27752653 tg 27752652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 13144081 - 13144129
Alignment:
Q  213 agagggagaaaattgaatgtaattttcatttaattctatgagaataaac 261  Q
    |||| |||||||||||||||||||| ||||||||| ||||| |||||||    
T  13144081 agagagagaaaattgaatgtaatttgcatttaattttatgaaaataaac 13144129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 188
Target Start/End: Complemental strand, 6401780 - 6401685
Alignment:
Q  93 ttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattg 188  Q
    ||||||||||| |||||| |||  |||||| |||||| ||||||||||| |  |||||| ||||||  ||  | |||||||||||||||| |||||    
T  6401780 ttattaagaaatctaaaatatagtaatttgtagtatagttttttgtgttattcttgaaataagtttcctaaaaagatgtaaaaacaatttccattg 6401685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 138 - 189
Target Start/End: Complemental strand, 14693484 - 14693433
Alignment:
Q  138 tgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattga 189  Q
    |||| ||||||||| || ||||||| || |||||||||||||||||||||||    
T  14693484 tgttatctttgaaataaattttataagaagatgtaaaaacaattttcattga 14693433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 93 - 175
Target Start/End: Complemental strand, 37598230 - 37598148
Alignment:
Q  93 ttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaa 175  Q
    |||||||||||||||| || ||   |||||| ||||||||||||||||| || |||||| |||||| || | | |||||||||    
T  37598230 ttattaagaaaactaacacttactgatttgaggtataattttttgtgttctccttgaaataagtttcatggaaagatgtaaaa 37598148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 145 - 261
Target Start/End: Complemental strand, 41756033 - 41755918
Alignment:
Q  145 tttgaaaaaagttttataggatgatgtaaaaacaattttcattgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcattta 244  Q
    ||||||| || |||||||| |  ||||||||| ||| |||||||| ||||| |||||       |||||||| || ||||||||||||||||| ||||||    
T  41756033 tttgaaataaattttatagaaaaatgtaaaaataatgttcattgattattgcttatggaaaaa-tgaaagagagaaaaaattgaatgtaatttacattta 41755935  T
Q  245 attctatgagaataaac 261  Q
    |||  |||| |||||||    
T  41755934 atttcatgataataaac 41755918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 87 - 137
Target Start/End: Complemental strand, 45190750 - 45190700
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttg 137  Q
    ||||| || ||||||||||||||||||||||||||| || ||| |||||||    
T  45190750 tcacacttgttaagaaaactaaaacataagaatttggagcatagttttttg 45190700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 218 - 259
Target Start/End: Complemental strand, 2052871 - 2052830
Alignment:
Q  218 gagaaaattgaatgtaattttcatttaattctatgagaataa 259  Q
    |||||||||||||||||||| |||||||||  ||||||||||    
T  2052871 gagaaaattgaatgtaatttgcatttaatttcatgagaataa 2052830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 87 - 188
Target Start/End: Complemental strand, 5217557 - 5217457
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| ||||||||||||||| |||||| | | ||| ||  || ||| ||||||| || |||||| |||||| |||| | ||||||||||||||||| ||    
T  5217557 tcacacttattaagaaaactataacata-gtagttgcagcgtagtttcttgtgttatccttgaaataagtttcatagaaagatgtaaaaacaatttttat 5217459  T
Q  187 tg 188  Q
    ||    
T  5217458 tg 5217457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 87 - 188
Target Start/End: Complemental strand, 11044224 - 11044123
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||||||| || ||   |||||| ||||||||||||||||| || ||| || |||||| ||   | |||||||||| |||| ||||    
T  11044224 tcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaataagtttcatgtaaagatgtaaaaataattctcat 11044125  T
Q  187 tg 188  Q
    ||    
T  11044124 tg 11044123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 87 - 188
Target Start/End: Original strand, 24612474 - 24612575
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||| ||| || ||   |||||| |||||||||||| |||| || ||| || |||||| || | |||||||||||| |||| ||||    
T  24612474 tcacacttattaagaaaattaacacttagtgatttgaggtataattttttatgttctccttggaataagtttcatggaatgatgtaaaaataattctcat 24612573  T
Q  187 tg 188  Q
    ||    
T  24612574 tg 24612575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 87 - 188
Target Start/End: Original strand, 31133023 - 31133124
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||||||| || ||   |||||| ||||||||||||||||| || ||| || || ||| || | | |||||||||| |||| ||||    
T  31133023 tcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaataaatttcatggaaagatgtaaaaataattctcat 31133122  T
Q  187 tg 188  Q
    ||    
T  31133123 tg 31133124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 87 - 188
Target Start/End: Complemental strand, 35260224 - 35260123
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||||||| || ||   |||||| |||| |||||||||||| || ||| || |||||| || | | |||||||||| |||| ||||    
T  35260224 tcacacttattaagaaaactaacacttagtgatttgaggtatcattttttgtgttctccttggaataagtttcatggaaagatgtaaaaataattctcat 35260125  T
Q  187 tg 188  Q
    ||    
T  35260124 tg 35260123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 87 - 188
Target Start/End: Original strand, 35346298 - 35346399
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    |||||||||||||||||| ||| |  ||   |||||| ||||||||||||||||| || |||||| || ||| || | | |||||||||| |||| ||||    
T  35346298 tcacatttattaagaaaattaatatttagtgatttgaggtataattttttgtgttctccttgaaataaatttcatggaaagatgtaaaaataattctcat 35346397  T
Q  187 tg 188  Q
    ||    
T  35346398 tg 35346399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 87 - 188
Target Start/End: Complemental strand, 44052788 - 44052687
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||||||| ||  |   |||||| ||||||||||||||||| || ||| || ||||||| | | | |||||||||| |||| ||||    
T  44052788 tcacacttattaagaaaactaacactcagtgatttgaggtataattttttgtgttctccttggaataagttttctggaaagatgtaaaaataattctcat 44052689  T
Q  187 tg 188  Q
    ||    
T  44052688 tg 44052687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 124; Significance: 2e-63; HSPs: 64)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 87 - 327
Target Start/End: Complemental strand, 18102698 - 18102457
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  18102698 tcacacttattaagaaaactaaaacataagaatttggagtataattttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaattttcat 18102599  T
Q  187 tgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaac-nnnnnnnntattgaaaaagataaa 285  Q
    || | |||| |||||       |||||||| | |||||||||||||||||| ||||||||| |||||||||||||         | ||||||||||||||    
T  18102598 tggccattggttatggaaaaaatgaaagagagtgaaaattgaatgtaatttgcatttaattttatgagaataaacaaaaaaaaatcttgaaaaagataaa 18102499  T
Q  286 agtttgtcnnnnnnncttatattttgggacaaagaaaatgtg 327  Q
    ||||||||       |||||||||||||||||||||||||||    
T  18102498 agtttgtcttttttgcttatattttgggacaaagaaaatgtg 18102457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 87 - 324
Target Start/End: Original strand, 46760249 - 46760487
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  46760249 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaattttcat 46760348  T
Q  187 tgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataa-acnnnnnnnntattgaaaaagataaa 285  Q
    || |||||| |||||       |||||||  ||||| |||||||||||||| ||||||||| ||||||||||| |         |||||||||| |||||    
T  46760349 tggctattggttatggaaaaaatgaaagaaagagaatattgaatgtaatttgcatttaattttatgagaataacaaaaaaaaaatattgaaaaaaataaa 46760448  T
Q  286 agtttgtcnnnnnnncttatattttgggacaaagaaaat 324  Q
    ||||||||       ||||||||||||||||||||||||    
T  46760449 agtttgtcttttttacttatattttgggacaaagaaaat 46760487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 87 - 261
Target Start/End: Complemental strand, 6191213 - 6191039
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||||||||||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  6191213 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttcttttaaaaaagttttataggaagatgtaaaaacaattttcat 6191114  T
Q  187 tgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaac 261  Q
    || |||||| |||||       |||||||| || |||||| |||||||||||||||||||| |||||||||||||    
T  6191113 tggctattggttatggagaaaatgaaagagagataaaattaaatgtaattttcatttaattttatgagaataaac 6191039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 87 - 327
Target Start/End: Complemental strand, 14806037 - 14805798
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||||||||||||||||||||| |||||| |||||||| |||||||||| ||||||||||||||| ||||||||||||||||||||    
T  14806037 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtattttctttga-aaaagttttataggaagatgtaaaaacaattttcat 14805939  T
Q  187 tgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaacnnnnnnnntattgaaaaagataaaa 286  Q
    || |||||| |||||       |||||||  |||||||||||||||||||| ||||||||| |||||||||||          | ||| |||||||||||    
T  14805938 tggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataacaaaaaaaaatcttggaaaagataaaa 14805839  T
Q  287 gtttgtcnnnnnnncttatattttgggacaaagaaaatgtg 327  Q
    |||||||       |||||||||||||||||||||||||||    
T  14805838 gtttgtctgttttgcttatattttgggacaaagaaaatgtg 14805798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 87 - 327
Target Start/End: Complemental strand, 15253031 - 15252792
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||||||||||||||||||||| |||||| |||||||| |||||||||| ||||||||||||||| ||||||||||||||||||||    
T  15253031 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtattttctttga-aaaagttttataggaagatgtaaaaacaattttcat 15252933  T
Q  187 tgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaacnnnnnnnntattgaaaaagataaaa 286  Q
    || |||||| |||||       |||||||  |||||||||||||||||||| ||||||||| |||||||||||          | ||| |||||||||||    
T  15252932 tggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataacaaaaaaaaatcttggaaaagataaaa 15252833  T
Q  287 gtttgtcnnnnnnncttatattttgggacaaagaaaatgtg 327  Q
    |||||||       |||||||||||||||||||||||||||    
T  15252832 gtttgtctgttttgcttatattttgggacaaagaaaatgtg 15252792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 93 - 261
Target Start/End: Complemental strand, 25944738 - 25944570
Alignment:
Q  93 ttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattgacta 192  Q
    |||||||||||||||||| ||||||||||| ||||||| ||||||||||||||||| |||||||||||||||| |||||||||||||||||||||| | |    
T  25944738 ttattaagaaaactaaaatataagaatttggagtataagtttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcattggcca 25944639  T
Q  193 ttgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaac 261  Q
    ||| |||||       | |||||| |||||||||||||||||||| ||||||||| |||||||||||||    
T  25944638 ttggttatggaaaaaataaaagagagagaaaattgaatgtaatttgcatttaattttatgagaataaac 25944570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 87 - 259
Target Start/End: Complemental strand, 45486123 - 45485951
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| ||||||||||||||||||||||| |||||| |||||| |||||||||||||||||| |||||||||||||||| |||||||||| |||||||||    
T  45486123 tcacacttattaagaaaactaaaacataaaaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaataattttcat 45486024  T
Q  187 tgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataa 259  Q
    || |||||| |||||       |||||||  |||||||||||||||||||| ||||||||| |||||||||||    
T  45486023 tggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 45485951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 87 - 360
Target Start/End: Original strand, 19912761 - 19913034
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    |||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| |||||||||||||| |  |||||||||||||||||||    
T  19912761 tcacatttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttatagtaaaatgtaaaaacaattttcat 19912860  T
Q  187 tgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaacnnnnnnnntattgaaaaagataaaa 286  Q
    ||  ||||| |||||       |||||||  |||||||||||||||||||| |||||||||  ||||||||||          | ||| |||||||||||    
T  19912861 tggttattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatttcatgagaataacaaaaaaaaatcttggaaaagataaaa 19912960  T
Q  287 gtttgtcnnnnnnncttatattttgggacaaagaaaatgtgnnnnnnnacttatattatgagacggagggagta 360  Q
    |||||||        ||||||||||||| ||||||||||||        ||||||||||| |||||||||||||    
T  19912961 gtttgtcttttttatttatattttgggataaagaaaatgtgttattttgcttatattatgggacggagggagta 19913034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 87 - 327
Target Start/End: Complemental strand, 35923419 - 35923180
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| ||||||||||||||||||||||| |||||| |||||| ||||| |||||||||||| |||||||||||||| | ||||||||||||||||||||    
T  35923419 tcacacttattaagaaaactaaaacataaaaatttggagtatagttttt-gtgttttctttggaaaaagttttatagaaagatgtaaaaacaattttcat 35923321  T
Q  187 tgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaacnnnnnnnntattgaaaaagataaaa 286  Q
    || |||||| |||||       |||||||  |||||||||||||||||||| ||||||||| |||||||||||          |||||||||||||||||    
T  35923320 tggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataacaaaaaaaaatattgaaaaagataaaa 35923221  T
Q  287 gtttgtcnnnnnnncttatattttgggacaaagaaaatgtg 327  Q
    |||| ||        ||||||||||||||||||||||||||    
T  35923220 gtttatctttttttattatattttgggacaaagaaaatgtg 35923180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 87 - 259
Target Start/End: Original strand, 25737619 - 25737791
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| ||||||||||||||||||||||| ||||||  ||||| |||| ||||||||||||| |||||||||||||||| ||||||||||||||||||||    
T  25737619 tcacacttattaagaaaactaaaacataaaaatttggggtatagttttgtgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 25737718  T
Q  187 tgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataa 259  Q
    || |||||| |||||       |||||||  |||||||||||||||||||| ||||||||| |||||||||||    
T  25737719 tggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 25737791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 87 - 261
Target Start/End: Original strand, 4910627 - 4910799
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| ||||| | |||||||||||||||||||||||||||||  ||||||||||||||||  |||||||||||||||| |||||||||| |||||||||    
T  4910627 tcacacttatttaaaaaactaaaacataagaatttgaagtata--tttttgtgttttctttagaaaaagttttataggaagatgtaaaaataattttcat 4910724  T
Q  187 tgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaac 261  Q
    || ||||||||||||       |||||||| || ||||||||||||||||| ||||||||| |||||| ||||||    
T  4910725 tggctattgattatggaaaaaatgaaagagagataaaattgaatgtaatttgcatttaattttatgagcataaac 4910799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 106 - 261
Target Start/End: Original strand, 20123691 - 20123846
Alignment:
Q  106 taaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattgactattgattatgnnnn 205  Q
    ||||||||||||||||| |||||| |||||||||| ||||||| |||||||||||||| | |||||||||||||||||||||| |||||| |||||        
T  20123691 taaaacataagaatttggagtatagttttttgtgtattctttggaaaaagttttatagcaagatgtaaaaacaattttcattggctattgcttatggaaa 20123790  T
Q  206 nnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaac 261  Q
       ||||||||  ||||||||||||||||||| ||||||||| |||||||||||||    
T  20123791 aaatgaaagagaaagaaaattgaatgtaatttgcatttaattttatgagaataaac 20123846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 87 - 195
Target Start/End: Original strand, 12632336 - 12632444
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    |||||||||||||||||| ||||||||||||||||| |||||| |||||| ||||||||||||||||||||| |||||| ||||||||||||||||||||    
T  12632336 tcacatttattaagaaaattaaaacataagaatttggagtatagttttttatgttttctttgaaaaaagtttcataggaagatgtaaaaacaattttcat 12632435  T
Q  187 tgactattg 195  Q
    || ||||||    
T  12632436 tggctattg 12632444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 87 - 259
Target Start/End: Complemental strand, 22632257 - 22632085
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| ||||||||||||||||| ||||| | |||| || |||  |||||||||||||||||||| |||||| || ||| ||||||||||||||||||||    
T  22632257 tcacacttattaagaaaactaaagcataaaagtttgtagcatagatttttgtgttttctttgaaataagtttcatgggaagatgtaaaaacaattttcat 22632158  T
Q  187 tgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataa 259  Q
    ||  ||||| |||||       || ||||| ||||||||| |||||||||| |||||||||  ||||||||||    
T  22632157 tggatattggttatggaaaaaatggaagagagagaaaattaaatgtaatttgcatttaatttcatgagaataa 22632085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 87 - 261
Target Start/End: Complemental strand, 44683045 - 44682872
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||||| ||||||||||||| || ||||||||||| |||||||| ||||||||||| |||| || |||||| ||  || ||||||||||||||||||||    
T  44683045 tcacattcattaagaaaactagaaaataagaatttggagtataatattttgtgttttttttggaataagtttgatgcgaagatgtaaaaacaattttcat 44682946  T
Q  187 tgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaac 261  Q
    ||||||||| |||||       |||||||   ||||||||| ||||||||| || ||||||  ||||||||||||    
T  44682945 tgactattggttatg-gagaaatgaaagatatagaaaattggatgtaatttgcaattaatttcatgagaataaac 44682872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 87 - 259
Target Start/End: Complemental strand, 47779772 - 47779600
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| ||||||||||||||||| |||||||||||| || ||| |||||||||||||||||  || |||||| || ||| ||||||||||||||||||||    
T  47779772 tcacacttattaagaaaactaaagcataagaatttgtagcatagttttttgtgttttctttagaataagtttcatgggaagatgtaaaaacaattttcat 47779673  T
Q  187 tgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataa 259  Q
    || | | || |||||       | |||||  ||||||||| |||||||||| |||||||||  ||||||||||    
T  47779672 tggcaactggttatggaaaaaataaaagaaagagaaaattaaatgtaatttgcatttaatttcatgagaataa 47779600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 118 - 261
Target Start/End: Original strand, 47557622 - 47557767
Alignment:
Q  118 atttgaagtataattttttgtgttttctttg--aaaaaagttttataggatgatgtaaaaacaattttcattgactattgattatgnnnnnnntgaaaga 215  Q
    ||||| |||||| ||||||||||||| |||   ||||||  ||||||||| |||||||||||||||||||||| ||||| ||||||       |||||||    
T  47557622 atttggagtatagttttttgtgtttttttttttaaaaaaaatttataggaagatgtaaaaacaattttcattggctattaattatggaaaaaatgaaaga 47557721  T
Q  216 gggagaaaattgaatgtaattttcatttaattctatgagaataaac 261  Q
    |  |||||||| |||||||||| |||||||||||||||||||||||    
T  47557722 gaaagaaaattaaatgtaatttgcatttaattctatgagaataaac 47557767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 87 - 201
Target Start/End: Complemental strand, 16917639 - 16917525
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||| |||||||||| |||||||| |||||  |||||| ||||||||| || |||||| || ||| ||||||||||||||||||||    
T  16917639 tcacacttattaagaaaattaaaacataaaaatttgaaatataacattttgttttttctttggaataagtttcatgggaagatgtaaaaacaattttcat 16917540  T
Q  187 tgactattgattatg 201  Q
    | ||||||| |||||    
T  16917539 taactattggttatg 16917525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 93 - 259
Target Start/End: Complemental strand, 14574726 - 14574560
Alignment:
Q  93 ttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattgacta 192  Q
    ||||||||||||| |||| ||||||||||| |||||| ||||||||||||||||   || |||||| || ||| |||||||||| ||||| ||||| |||    
T  14574726 ttattaagaaaaccaaaatataagaatttggagtatagttttttgtgttttcttgataataagtttcatgggaagatgtaaaaataatttccattgtcta 14574627  T
Q  193 ttgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataa 259  Q
    ||| |||||       || ||||| | ||||||||| | |||||| ||||||||| |||||||||||    
T  14574626 ttggttatgaagaaaatggaagagagtgaaaattgattttaatttgcatttaattttatgagaataa 14574560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 87 - 187
Target Start/End: Original strand, 35887961 - 35888061
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| ||||||| ||||||||||||||  | |||| |  ||||||||||||||| ||||||||| || |||||||||| ||||||||||||||||||||    
T  35887961 tcacacttattaaaaaaactaaaacatagtagtttgtaacataattttttgtgttatctttgaaataacttttataggaagatgtaaaaacaattttcat 35888060  T
Q  187 t 187  Q
    |    
T  35888061 t 35888061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 101 - 261
Target Start/End: Complemental strand, 11780171 - 11780012
Alignment:
Q  101 aaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattgactattgattat 200  Q
    |||||||||| ||||||||||| | |||| ||||| ||||||||||| ||| || |||||| ||| |||||||||| || ||||||||||||||  ||||    
T  11780171 aaaactaaaatataagaatttggaatatagtttttcgtgttttctttaaaataaattttattggaagatgtaaaaataa-tttcattgactatttcttat 11780073  T
Q  201 gnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaac 261  Q
    |       || ||||  |||||||||  ||||||||| ||||||||| |||||||||||||    
T  11780072 gaagaaaatggaagaaagagaaaatttgatgtaatttgcatttaattttatgagaataaac 11780012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 131 - 200
Target Start/End: Original strand, 35068885 - 35068954
Alignment:
Q  131 ttttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattgactattgattat 200  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||  |||||| ||||    
T  35068885 ttttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaattttaattagctattggttat 35068954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 87 - 186
Target Start/End: Original strand, 37767011 - 37767110
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||||||||||||||||||||||||| | |||||| |||||| ||||||||||||||||| |||  | ||| || |||  || ||||||||||||||||    
T  37767011 tcacatttattaagaaaactaaaacatgataatttggagtatagttttttgtgttttctttaaaactaatttcatgggaacatataaaaacaattttcat 37767110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 93 - 188
Target Start/End: Complemental strand, 40560539 - 40560444
Alignment:
Q  93 ttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattg 188  Q
    ||||||| |||||||| || ||| ||||||| ||||||||||||||||| || |||||| ||||||||||| | |||||||||| |||| ||||||    
T  40560539 ttattaaaaaaactaacacttaataatttgaggtataattttttgtgttctccttgaaataagttttatagaaagatgtaaaaataattctcattg 40560444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 87 - 188
Target Start/End: Complemental strand, 10248698 - 10248595
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaa-tttgaagtataatttt-ttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttc 184  Q
    ||||||||||||||||||||||||||| || | |||| |  ||| |||| ||||||| || |||||| ||||||||||| | ||||||||||||||||||    
T  10248698 tcacatttattaagaaaactaaaacattagtagtttgtaacatagttttcttgtgttatccttgaaataagttttatagaaagatgtaaaaacaattttc 10248599  T
Q  185 attg 188  Q
    ||||    
T  10248598 attg 10248595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 93 - 259
Target Start/End: Complemental strand, 15995882 - 15995715
Alignment:
Q  93 ttattaagaaaactaaaacataagaatttgaagtata-attttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattgact 191  Q
    ||||||||||||| |||| ||||||||||| ||||||  ||||||||||||||||   || |||||| || | | |||||||||| ||||| |||||  |    
T  15995882 ttattaagaaaaccaaaatataagaatttggagtatagtttttttgtgttttcttcataataagtttcatggaaagatgtaaaaataatttccattggtt 15995783  T
Q  192 attgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataa 259  Q
    |||| |||||       || ||||| | ||||||||| | |||||| ||||||||| |||||||||||    
T  15995782 attggttatgaagaaaatggaagagagtgaaaattgattttaatttgcatttaattttatgagaataa 15995715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 131 - 189
Target Start/End: Original strand, 31768998 - 31769056
Alignment:
Q  131 ttttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattga 189  Q
    ||||||||||  ||||||||| ||||||||||||| |||||||||||||||||||||||    
T  31768998 ttttttgtgtcatctttgaaataagttttataggaagatgtaaaaacaattttcattga 31769056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 87 - 181
Target Start/End: Complemental strand, 33153202 - 33153108
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaatt 181  Q
    ||||| ||||||| ||||| ||||||||| | ||||||||||||||||||||||| |  |||||| || |||||| | | |||||||||||||||    
T  33153202 tcacacttattaaaaaaacaaaaacataatagtttgaagtataattttttgtgttcttcttgaaataaattttatggaaagatgtaaaaacaatt 33153108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 87 - 179
Target Start/End: Original strand, 2633329 - 2633421
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaa 179  Q
    ||||||||||||||||||||||||||||| ||||| | ||| || |||| ||||| || || ||| || ||||| |||| |||||||||||||    
T  2633329 tcacatttattaagaaaactaaaacataataattttaggtaaaacttttggtgttctccttaaaataaattttacaggaagatgtaaaaacaa 2633421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 218 - 327
Target Start/End: Original strand, 12633110 - 12633219
Alignment:
Q  218 gagaaaattgaatgtaattttcatttaattctatgagaataaacnnnnnnnntattgaaaaagataaaagtttgtcnnnnnnncttatattttgggacaa 317  Q
    |||||||||||||||||||| ||||||||| |||||||||||||        | ||| ||||||||||||||||||        ||||||||||||||||    
T  12633110 gagaaaattgaatgtaatttgcatttaattttatgagaataaacaaaaaaaatcttggaaaagataaaagtttgtctattttgattatattttgggacaa 12633209  T
Q  318 agaaaatgtg 327  Q
    | ||||||||    
T  12633210 aaaaaatgtg 12633219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 93 - 188
Target Start/End: Complemental strand, 3157593 - 3157498
Alignment:
Q  93 ttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattg 188  Q
    |||||||||||||||| || ||   |||||| ||||||||||||||||| ||||||||| |||||| || | | |||||||||| |||| ||||||    
T  3157593 ttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctctttgaaataagtttcatggaaagatgtaaaaataattctcattg 3157498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 140 - 261
Target Start/End: Complemental strand, 9158204 - 9158084
Alignment:
Q  140 ttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttc 239  Q
    |||| ||| ||||||||||||||||| |||||||||||||||||| ||| | |||| |||||       ||||||||  | ||| ||||||||||||| |    
T  9158204 ttttttttaaaaaaagttttataggaagatgtaaaaacaattttctttggccattggttatg-aaaaaatgaaagagaaaaaaatttgaatgtaatttgc 9158106  T
Q  240 atttaattctatgagaataaac 261  Q
    |||||||| ||| |||||||||    
T  9158105 atttaattttataagaataaac 9158084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 101 - 201
Target Start/End: Complemental strand, 48413867 - 48413772
Alignment:
Q  101 aaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattgactattgattat 200  Q
    ||||||| |||||||||||||| |||||||||||  ||||||| ||   || |||||||||  || |||| |||||||||||||||||||||||| ||||    
T  48413867 aaaactacaacataagaatttggagtataatttt--gtgttttttt---aataagttttatgagaagatgcaaaaacaattttcattgactattggttat 48413773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 93 - 188
Target Start/End: Complemental strand, 48879545 - 48879450
Alignment:
Q  93 ttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattg 188  Q
    |||||||||||||||| || |||  |||||| |||||||||||||| || || ||| || ||||||||||| | |||||||||| |||| ||||||    
T  48879545 ttattaagaaaactaacacttaatgatttgaggtataattttttgtattctccttggaataagttttatagaaagatgtaaaaataattctcattg 48879450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 89 - 187
Target Start/End: Complemental strand, 39170700 - 39170602
Alignment:
Q  89 acatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcatt 187  Q
    |||||||||||||||| ||||| |||  | |||| |  ||| ||| ||||||| || |||||| |||||||||| || |||||||||||||||||||||    
T  39170700 acatttattaagaaaattaaaatatagtagtttgtaacatagtttattgtgttatccttgaaataagttttatacgaagatgtaaaaacaattttcatt 39170602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 87 - 188
Target Start/End: Original strand, 43107856 - 43107957
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    |||||||||||||||||||||| || ||   |||||| ||||||||||||||||| || ||| || |||||| || | | |||||||||| |||| ||||    
T  43107856 tcacatttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaataagtttcatggaaagatgtaaaaataattctcat 43107955  T
Q  187 tg 188  Q
    ||    
T  43107956 tg 43107957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 93 - 188
Target Start/End: Original strand, 41815650 - 41815745
Alignment:
Q  93 ttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattg 188  Q
    |||||||||||||||| || ||   |||||| ||||||||||||||||| || ||| || ||||||||| | | |||||||||| |||| ||||||    
T  41815650 ttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaataagttttatggaaagatgtaaaaataattctcattg 41815745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 272 - 361
Target Start/End: Original strand, 47557924 - 47558013
Alignment:
Q  272 ttgaaaaagataaaagtttgtcnnnnnnncttatattttgggacaaagaaaatgtgnnnnnnnacttatattatgagacggagggagtaa 361  Q
    |||||||| |||||||||||||       |||||||||||||||||||||||||||        ||||||||||| ||||||||||||||    
T  47557924 ttgaaaaacataaaagtttgtcttttttgcttatattttgggacaaagaaaatgtgttttttttcttatattatgggacggagggagtaa 47558013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 131 - 201
Target Start/End: Original strand, 31549939 - 31550009
Alignment:
Q  131 ttttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattgactattgattatg 201  Q
    ||||||| |||||||||  || || |||||||||| ||||||||||||| |||||||||| |||| |||||    
T  31549939 ttttttgcgttttctttagaataaattttataggaagatgtaaaaacaactttcattgacaattggttatg 31550009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 87 - 188
Target Start/End: Original strand, 19933006 - 19933107
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||||||| || ||   |||||| |||| |||||||||||| || ||| || |||||| || | | |||||||||| |||||||||    
T  19933006 tcacacttattaagaaaactaacacttagtgatttgaggtatgattttttgtgttctccttggaataagtttcatggaaagatgtaaaaataattttcat 19933105  T
Q  187 tg 188  Q
    ||    
T  19933106 tg 19933107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 87 - 188
Target Start/End: Complemental strand, 23106616 - 23106515
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||||||| || ||   |||||| ||||||||||||||||| || || ||| |||||| || | | |||||||||| |||| ||||    
T  23106616 tcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttaaaataagtttcatggaaagatgtaaaaataattctcat 23106517  T
Q  187 tg 188  Q
    ||    
T  23106516 tg 23106515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 87 - 188
Target Start/End: Original strand, 32491058 - 32491159
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    |||||||||||||||||||||| || |    |||||| ||||||||||||||||| || ||  || |||||| || | | |||||||||| |||||||||    
T  32491058 tcacatttattaagaaaactaacacttggtgatttgatgtataattttttgtgttctccttataataagtttcatggaaagatgtaaaaataattttcat 32491157  T
Q  187 tg 188  Q
    ||    
T  32491158 tg 32491159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 87 - 188
Target Start/End: Complemental strand, 35181355 - 35181254
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||||||| || ||   |||||| ||||||||||||||||| || ||| || |||||| || | | |||||||||| |||| ||||    
T  35181355 tcacacttattaagaaaactaacacttactgatttgaggtataattttttgtgttctccttggaataagtttcatggaaagatgtaaaaataattctcat 35181256  T
Q  187 tg 188  Q
    ||    
T  35181255 tg 35181254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 87 - 188
Target Start/End: Complemental strand, 41889334 - 41889233
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||||||| || ||   |||||| |||||||||||||| || || |||||| |||||| || | | |||||||||| |||| ||||    
T  41889334 tcacacttattaagaaaactaacacttagtgatttgatgtataattttttgtattctccttgaaataagtttcatggaaagatgtaaaaataattctcat 41889235  T
Q  187 tg 188  Q
    ||    
T  41889234 tg 41889233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 87 - 188
Target Start/End: Complemental strand, 44600609 - 44600508
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    |||||||||||||||||||||| || ||   |||||| ||||||||||||||||| || ||  || |||||| |  | | |||||||||| |||||||||    
T  44600609 tcacatttattaagaaaactaacacttagcgatttgaggtataattttttgtgttctccttagaataagtttcaaggaaagatgtaaaaataattttcat 44600510  T
Q  187 tg 188  Q
    ||    
T  44600509 tg 44600508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 113 - 261
Target Start/End: Original strand, 2610586 - 2610734
Alignment:
Q  113 taagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattgactattgattatgnnnnnnntgaa 212  Q
    |||||||||| |||||| ||||||| | || ||||| || ||  ||||||| | |||||||||||| ||||| ||| |||||| |||||       || |    
T  2610586 taagaatttggagtatatttttttgcgcttcctttggaataaaatttatagaaagatgtaaaaacatttttctttggctattggttatggagaaaatgga 2610685  T
Q  213 agagggagaaaattgaatgtaattttcatttaattctatgagaataaac 261  Q
    ||||    ||||||||||||||||| || ||||||  ||||||||||||    
T  2610686 agagaagaaaaattgaatgtaatttgcacttaatttcatgagaataaac 2610734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 19492390 - 19492441
Alignment:
Q  92 tttattaagaaaactaaaacataagaatttgaagtataattttttgtgtttt 143  Q
    |||||||||||||||||||||||| |||||  ||||||| ||||||| ||||    
T  19492390 tttattaagaaaactaaaacataaaaatttagagtataactttttgtatttt 19492441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 188
Target Start/End: Original strand, 19964151 - 19964246
Alignment:
Q  93 ttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattg 188  Q
    |||||||||||||||| || ||   |||||| |||| |||||||||||| || ||| || |||||| || | | |||||||||| |||||||||||    
T  19964151 ttattaagaaaactaacacttagtgatttgaggtatgattttttgtgttctccttggaataagtttcatggaaagatgtaaaaataattttcattg 19964246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 153 - 200
Target Start/End: Original strand, 24151640 - 24151687
Alignment:
Q  153 aagttttataggatgatgtaaaaacaattttcattgactattgattat 200  Q
    ||||||||||||| ||||||||||||||||||| ||| ||||| ||||    
T  24151640 aagttttataggaagatgtaaaaacaattttcactgattattggttat 24151687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 87 - 181
Target Start/End: Original strand, 35084052 - 35084146
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaatt 181  Q
    ||||| ||| |||||||||||||||| |  |||||||  |||| ||||||||||| |  |||||| |||||| |||  | |||||||||||||||    
T  35084052 tcacacttaataagaaaactaaaacacagtaatttgagttatagttttttgtgttcttcttgaaataagtttcataaaaagatgtaaaaacaatt 35084146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 87 - 181
Target Start/End: Complemental strand, 42617834 - 42617740
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaatt 181  Q
    ||||| ||||||| |||||||| || |||  |||||| ||||||||||||||||| || ||| || |||||| || | | |||||||||| ||||    
T  42617834 tcacacttattaaaaaaactaacacttaatgatttgaggtataattttttgtgttctccttggaataagtttcatggaaagatgtaaaaataatt 42617740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 94 - 188
Target Start/End: Complemental strand, 47383562 - 47383468
Alignment:
Q  94 tattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattg 188  Q
    ||||||||||||||| || |||  ||||||  |||||||||||||||| || || ||| |||||| || | | |||||||||| |||| ||||||    
T  47383562 tattaagaaaactaacacttaatgatttgagatataattttttgtgttctccttaaaataagtttcatggaaagatgtaaaaataattctcattg 47383468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 87 - 188
Target Start/End: Original strand, 7989259 - 7989360
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||||||| || ||   |||||| ||||||||||||||||| || ||| || || ||| || | | |||||||||| |||| ||||    
T  7989259 tcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaataaatttcatggaaagatgtaaaaataattctcat 7989358  T
Q  187 tg 188  Q
    ||    
T  7989359 tg 7989360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 87 - 188
Target Start/End: Complemental strand, 9818631 - 9818530
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||||||| |  ||   |||||| |||||||||||| |||| || ||| || ||||||||| | | |||||||||| |||| ||||    
T  9818631 tcacacttattaagaaaactaacatttagtgatttgaggtataattttttatgttctccttggaataagttttatggaaagatgtaaaaataattctcat 9818532  T
Q  187 tg 188  Q
    ||    
T  9818531 tg 9818530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 87 - 188
Target Start/End: Complemental strand, 10720556 - 10720455
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||||||| |  ||   |||||| |||||||||||| |||| || ||| || ||||||||| | | |||||||||| |||| ||||    
T  10720556 tcacacttattaagaaaactaacatttagtgatttgaggtataattttttatgttctccttggaataagttttatggaaagatgtaaaaataattctcat 10720457  T
Q  187 tg 188  Q
    ||    
T  10720456 tg 10720455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 87 - 188
Target Start/End: Original strand, 18206270 - 18206371
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||| ||| || ||   |||||| ||||||||||||||||| || ||| || |||||| || | | |||||||||| |||| ||||    
T  18206270 tcacacttattaagaaaattaacacttagtgatttgaggtataattttttgtgttctccttggaataagtttcatggaaagatgtaaaaataattctcat 18206369  T
Q  187 tg 188  Q
    ||    
T  18206370 tg 18206371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 87 - 188
Target Start/End: Original strand, 22111281 - 22111382
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||||||| || ||   |||||| ||||||||||||||||| || ||| || || |||| | | | |||||||||| |||| ||||    
T  22111281 tcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaataaattttctggaaagatgtaaaaataattctcat 22111380  T
Q  187 tg 188  Q
    ||    
T  22111381 tg 22111382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 87 - 188
Target Start/End: Complemental strand, 29713357 - 29713256
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    |||||||||||||||||||||| |||| |   |||| |||||| ||| ||||||  |||||  || || ||| |||| | | ||||||||||||||||||    
T  29713357 tcacatttattaagaaaactaagacatcattgtttgtagtatagtttcttgtgtcatctttagaataactttcatagaaagttgtaaaaacaattttcat 29713258  T
Q  187 tg 188  Q
    ||    
T  29713257 tg 29713256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 87 - 188
Target Start/End: Complemental strand, 38260484 - 38260383
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| ||||||| |||| ||||||||   | |||| | |||| ||||||||||| |  |||||| ||||||||||| | | |||||||| |||||||||    
T  38260484 tcacacttattaaaaaaattaaaacattgtagtttgtaatatagttttttgtgttattcttgaaataagttttatagaaagttgtaaaaataattttcat 38260385  T
Q  187 tg 188  Q
    ||    
T  38260384 tg 38260383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 87 - 188
Target Start/End: Complemental strand, 40583308 - 40583207
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||||||| || ||   |||||| ||||||||||||||||| || ||| || || |||| | | | |||||||||| |||| ||||    
T  40583308 tcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaataaattttctggaaagatgtaaaaataattctcat 40583209  T
Q  187 tg 188  Q
    ||    
T  40583208 tg 40583207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 149 - 201
Target Start/End: Complemental strand, 4069109 - 4069057
Alignment:
Q  149 aaaaaagttttataggatgatgtaaaaacaattttcattgactattgattatg 201  Q
    ||||||||||||||| | |||||||||| |||||||||||  ||||| |||||    
T  4069109 aaaaaagttttatagaaagatgtaaaaagaattttcattggttattggttatg 4069057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 87 - 162
Target Start/End: Complemental strand, 4069331 - 4069253
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtata---attttttgtgttttctttgaaaaaagttttata 162  Q
    ||||| |||| ||||||| |||||||| | |||||||  ||||   |||||||||||||| ||||||| ||||||||||    
T  4069331 tcacacttatcaagaaaattaaaacattaaaatttgagatatactaattttttgtgttttttttgaaataagttttata 4069253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 221 - 261
Target Start/End: Original strand, 35068961 - 35069001
Alignment:
Q  221 aaaattgaatgtaattttcatttaattctatgagaataaac 261  Q
    ||||||||||||||||| ||||||||  |||||||||||||    
T  35068961 aaaattgaatgtaatttgcatttaatattatgagaataaac 35069001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 93 - 188
Target Start/End: Complemental strand, 45599062 - 45598966
Alignment:
Q  93 ttattaagaaaactaaaacataagaatttgaagtataatt-ttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattg 188  Q
    |||||||||||||||| || ||   |||||| |||||||| |||||| ||||| |||||| |||||| || | | |||||||||| |||| ||||||    
T  45599062 ttattaagaaaactaacacttagtgatttgaggtataatttttttgtattttccttgaaataagtttcatggaaagatgtaaaaataattctcattg 45598966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 122; Significance: 2e-62; HSPs: 89)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 87 - 261
Target Start/End: Original strand, 15959633 - 15959807
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  15959633 tcacatttattaagaaaactaaaacataagaatttggagtataattttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaattttcat 15959732  T
Q  187 tgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaac 261  Q
    || |||||| |||||       | |||||| |||||||||||||||||||| ||||||||| |||||||||||||    
T  15959733 tggctattggttatggaaaaaattaaagagagagaaaattgaatgtaatttgcatttaattttatgagaataaac 15959807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 87 - 327
Target Start/End: Original strand, 32623998 - 32624239
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||||||||||||||||||||| ||| || ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  32623998 tcacaattattaagaaaactaaaacataagaatttggagtgtagttttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaattttcat 32624097  T
Q  187 tgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaac-nnnnnnnntattgaaaaagataaa 285  Q
    || | |||| |||||       |||||||| |||||||||||||||||||| ||||||||| |||||||||||||         | ||| ||||||||||    
T  32624098 tggccattggttatggaaaaaatgaaagagagagaaaattgaatgtaatttgcatttaattttatgagaataaacaaaaaaaaatcttggaaaagataaa 32624197  T
Q  286 agtttgtcnnnnnnncttatattttgggacaaagaaaatgtg 327  Q
    ||||||||       |||||||||||||||||||||||||||    
T  32624198 agtttgtcttttttgcttatattttgggacaaagaaaatgtg 32624239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 87 - 327
Target Start/End: Original strand, 39555579 - 39555819
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||| ||||||||||||||||| ||||||  |||||||||||||||||||||||||||||||| | ||||||||||||||||||||    
T  39555579 tcacacttattaagaaaattaaaacataagaatttggagtataggtttttgtgttttctttgaaaaaagttttatagaaagatgtaaaaacaattttcat 39555678  T
Q  187 tgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaacnnnnnnnntattgaaaaagataaaa 286  Q
    || |||||| |||||       |||||||| ||||| |||||||||||||| ||||||||| |||||||||||||        | ||| |||||||||||    
T  39555679 tggctattggttatggaaaaaatgaaagagagagaacattgaatgtaatttgcatttaattttatgagaataaacaaaaaaaatcttggaaaagataaaa 39555778  T
Q  287 gtttgtcnnnnnnncttatattttgggacaaagaaaatgtg 327  Q
    |||||||       |||||||||||||||||||||||||||    
T  39555779 gtttgtcttttttgcttatattttgggacaaagaaaatgtg 39555819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 87 - 327
Target Start/End: Original strand, 43667296 - 43667533
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    |||||||||||||||||| ||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||    
T  43667296 tcacatttattaagaaaattaagacataagaatttaaagtataattttttgtgttttctttgaaaaaagttttataggaagacgtaaaaacaattttcat 43667395  T
Q  187 tgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaacnnnnnnnntattgaaaaagataaaa 286  Q
    || | |||| |||||       |||||||  |||||||||||||||||||| ||||||||| |||||||||||||        | |||||||||||||||    
T  43667396 tggccattggttatggaaaaaatgaaaga--gagaaaattgaatgtaatttacatttaattttatgagaataaac-aaaaaaatcttgaaaaagataaaa 43667492  T
Q  287 gtttgtcnnnnnnncttatattttgggacaaagaaaatgtg 327  Q
    |||||||       ||||||||||| |||||||||||||||    
T  43667493 gtttgtcttttttgcttatattttgagacaaagaaaatgtg 43667533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 95 - 327
Target Start/End: Original strand, 12448969 - 12449200
Alignment:
Q  95 attaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattgactatt 194  Q
    |||||||||| ||||| ||||||||||| |||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| | |||    
T  12448969 attaagaaaattaaaa-ataagaatttggagtatagttttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaattttcattggccatt 12449067  T
Q  195 gattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaacnnnnnnnntattgaaaaagataaaagtttgtcn 294  Q
    | |||||       | |||||| |||||||||||||||||||| ||||||||| |||||||||||||        | ||| ||||||||||||||||||     
T  12449068 ggttatggaaaaaatcaaagagagagaaaattgaatgtaatttgcatttaattttatgagaataaacaaaaaaaatcttggaaaagataaaagtttgtct 12449167  T
Q  295 nnnnnncttatattttgggacaaagaaaatgtg 327  Q
          |||||||||||||||||||||||||||    
T  12449168 tttttgcttatattttgggacaaagaaaatgtg 12449200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 87 - 327
Target Start/End: Complemental strand, 2126206 - 2125965
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    |||||||||||||||||||||||||||||||||||| | |||| |||||||||||||||||| |||||||||||||||| ||||||||||||||||||||    
T  2126206 tcacatttattaagaaaactaaaacataagaatttggaatatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 2126107  T
Q  187 tgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaacnnnnnnnnta-ttgaaaaagataaa 285  Q
    || |||||| |||||       |||||||  |||||||||||||||||||| |||||||||  |||||||| |||         | || |||||||||||    
T  2126106 tggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaatttaatgagaatgaacaaaaaaaaaatttaaaaaagataaa 2126007  T
Q  286 agtttgtcnnnnnnncttatattttgggacaaagaaaatgtg 327  Q
    ||||||||       |||||||||| ||||||||||||||||    
T  2126006 agtttgtcttttttacttatattttaggacaaagaaaatgtg 2125965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 93 - 261
Target Start/End: Original strand, 7467961 - 7468130
Alignment:
Q  93 ttattaagaaaactaaaacataagaatttgaagta-taattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattgact 191  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |||| |||||||| ||||||||||||| ||    
T  7467961 ttattaagaaaactaaaacataagaatttgaagtaataattttttgtgttttctttggaaaaagttttaaaggaagatgtaaatacaattttcattggct 7468060  T
Q  192 attgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaac 261  Q
    |||||||| |       ||||||||  ||||||||||||||||||| ||||||||| |||||||||||||    
T  7468061 attgattaagagaaaaatgaaagagatagaaaattgaatgtaatttgcatttaattttatgagaataaac 7468130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 87 - 261
Target Start/End: Complemental strand, 45226306 - 45226132
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| ||||||||||||||||||||||| |||||  |||||| |||| ||| |||||||||||||||||||||||||| || |||||||||||||||||    
T  45226306 tcacacttattaagaaaactaaaacataataatttagagtatagttttatgtattttctttgaaaaaagttttataggaagacgtaaaaacaattttcat 45226207  T
Q  187 tgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaac 261  Q
    ||||||||| |||||       ||||||||  ||||||||||||||||||| ||||||||| |||||||||||||    
T  45226206 tgactattggttatggaaaaaatgaaagagatagaaaattgaatgtaatttgcatttaattttatgagaataaac 45226132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 87 - 259
Target Start/End: Complemental strand, 35691560 - 35691388
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| ||    
T  35691560 tcacatttattaagaaa-ctaaaacataagaatttggagtataattttttgtgttttctttgaaaaaagttttatagggagatgtaaaaacaatttttat 35691462  T
Q  187 tgactattgattat-gnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataa 259  Q
    || |||||| |||| |       |||||||  |||||||||||||||||||| ||||||||| |||||||||||    
T  35691461 tggctattggttatggaaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 35691388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 87 - 261
Target Start/End: Complemental strand, 33369718 - 33369547
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| ||||||||||||||||||||||| |||||| |||||| |||||||||||||||||| ||||||||||||| || ||||||||||||||||||||    
T  33369718 tcacacttattaagaaaactaaaacataaaaatttggagtatagttttttgtgttttctttggaaaaagttttatatga-gatgtaaaaacaattttcat 33369620  T
Q  187 tgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaac 261  Q
    || |||||| |||||       |||||||  |||||||||||||||||||| ||||||||| |||||||||||||    
T  33369619 tggctattggttatggaaaaaatgaaaga--gagaaaattgaatgtaatttgcatttaattttatgagaataaac 33369547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 87 - 261
Target Start/End: Complemental strand, 6787006 - 6786832
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| ||||||||||||||||||||| |||||||| |||||| |||||||||||||||||| ||||||||||||| || |||||||| |||||||||||    
T  6787006 tcacacttattaagaaaactaaaacatgagaatttggagtatagttttttgtgttttctttggaaaaagttttatatgaagatgtaaacacaattttcat 6786907  T
Q  187 tgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaac 261  Q
    || |||||| |||||       |||||||| | |||||||||||||| ||| ||||||||| |||||||||||||    
T  6786906 tggctattggttatggaaaaaatgaaagagagtgaaaattgaatgtagtttgcatttaattttatgagaataaac 6786832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 88 - 261
Target Start/End: Complemental strand, 6785622 - 6785450
Alignment:
Q  88 cacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcatt 187  Q
    |||| |||||||||||||||||||||||||||| || ||||| |||||||||||||||||  ||||||||||||| || |||||||||||||||||||||    
T  6785622 cacacttattaagaaaactaaaacataagaattgga-gtatagttttttgtgttttcttttgaaaaagttttatatgaagatgtaaaaacaattttcatt 6785524  T
Q  188 gactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaac 261  Q
    | |||||| |||||       |||||||| |||||||||||||||| ||| ||||||||| |||||||||||||    
T  6785523 ggctattggttatggaaaaaatgaaagagagagaaaattgaatgtagtttgcatttaattttatgagaataaac 6785450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 87 - 259
Target Start/End: Complemental strand, 24190637 - 24190466
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||||||||||||||||||||| |||||| |||||||||||||||||| ||||||||||||| |  ||||||||||||||||||||    
T  24190637 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttatacggagatgtaaaaacaattttcat 24190538  T
Q  187 tgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataa 259  Q
    || |||||| |||||       |||||||  ||||||||| |||||||||| ||||||||| |||||||||||    
T  24190537 tggctattggttatggaaaaaatgaaagaaagagaaaatt-aatgtaatttgcatttaattttatgagaataa 24190466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 93 - 261
Target Start/End: Original strand, 42965815 - 42965981
Alignment:
Q  93 ttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattgacta 192  Q
    ||||||||||||||||||||||| |||||||||| || |||||||||||||||||| ||||| |||||||||| |||||||||||||||||||||| |||    
T  42965815 ttattaagaaaactaaaacataaaaatttgaagtttagttttttgtgttttctttggaaaaa-ttttataggaagatgtaaaaacaattttcattggcta 42965913  T
Q  193 ttgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaac 261  Q
    ||| |||||       |||||||| |||||||||||||||||||| ||||||||| ||| |||||||||    
T  42965914 ttggttatg-gaaaaatgaaagagagagaaaattgaatgtaatttgcatttaattttataagaataaac 42965981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 87 - 261
Target Start/End: Original strand, 28016739 - 28016911
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||||||||||||||||||||  |||||| ||||| ||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  28016739 tcacacttattaagaaaactaaaacataagaatttagagtatagtttttggtgttttctttgaaaaatgttttataggaagatgtaaaaacaattttcat 28016838  T
Q  187 tgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaac 261  Q
    || |||||| ||||        | |||||  ||||||||||||||||| || ||||||||| |||||||||||||    
T  28016839 tggctattggttataaaaaaaataaaaga--gagaaaattgaatgtaacttgcatttaattttatgagaataaac 28016911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 87 - 261
Target Start/End: Original strand, 28120748 - 28120922
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    |||||||||||||||||||||| | |||||||| || |||||| ||||||||||||| ||| |||  | |||||| ||| ||||||||||||||||||||    
T  28120748 tcacatttattaagaaaactaagaaataagaatgtggagtatagttttttgtgttttttttaaaatgaattttatgggaagatgtaaaaacaattttcat 28120847  T
Q  187 tgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaac 261  Q
    || ||||||||||||       |||||||| |||||||||||||||||||| ||||||||| |||| ||||||||    
T  28120848 tggctattgattatggaaaaaatgaaagagagagaaaattgaatgtaatttgcatttaattttatgtgaataaac 28120922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 87 - 261
Target Start/End: Original strand, 32983165 - 32983337
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| ||||||||||||||||||||||| |||| |||||||| ||||||||||||||||||  |||||||||||| || ||||||||||||||||||||    
T  32983165 tcacacttattaagaaaactaaaacataaaaattggaagtatagttttttgtgttttctttg-gaaaagttttataagaagatgtaaaaacaattttcat 32983263  T
Q  187 tgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaac 261  Q
    || | |||| |||||       |||||||| ||||||||||||| |||||| ||||||||| |||||||||||||    
T  32983264 tggc-attggttatggaaaaaatgaaagagagagaaaattgaatataatttgcatttaattttatgagaataaac 32983337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 87 - 261
Target Start/End: Complemental strand, 40718846 - 40718672
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||| ||||||||||| |||| |||||| |||||| |||||||||||||||||||||||||||||||| || | |||| |||||||||||||    
T  40718846 tcacacttattacgaaaactaaaatataaaaatttggagtatagttttttgtgttttctttgaaaaaagttttatatgaagttgtagaaacaattttcat 40718747  T
Q  187 tgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaac 261  Q
    || |||||| | ||        |||||||  |||||||||||||||||||| ||||||||| |||||||||||||    
T  40718746 tggctattggtaatagaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataaac 40718672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 88 - 261
Target Start/End: Original strand, 47014487 - 47014657
Alignment:
Q  88 cacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcatt 187  Q
    |||| ||| |||| |||||||||||||||||| || ||||   |||||||||||||| ||||||||||||||||||||  ||||||||||||||||||||    
T  47014487 cacacttactaagtaaactaaaacataagaatctggagtag--ttttttgtgttttcgttgaaaaaagttttataggaaaatgtaaaaacaattttcatt 47014584  T
Q  188 gactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaac 261  Q
    |||||||| |||||       |||||||| ||||||||||||||| |||| ||||||||| |||||||||||||    
T  47014585 gactattggttatggaaaaaatgaaagagagagaaaattgaatgt-atttacatttaattttatgagaataaac 47014657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 87 - 201
Target Start/End: Complemental strand, 11241195 - 11241081
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| ||||||| |||| ||||||||||||||||| |||||| |||||||||||||||||| |||||||||||||||| ||||||||| ||||||||||    
T  11241195 tcacacttattaaaaaaattaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaccaattttcat 11241096  T
Q  187 tgactattgattatg 201  Q
    || |||||| |||||    
T  11241095 tggctattggttatg 11241081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 91 - 261
Target Start/End: Complemental strand, 46543146 - 46542978
Alignment:
Q  91 atttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattgac 190  Q
    ||||||||| ||||||||||||||| |||||| |||||| ||||||||||||||||||||||||  ||||||||| |||| ||||||||||| ||||| |    
T  46543146 atttattaaaaaaactaaaacataaaaatttggagtatagttttttgtgttttctttgaaaaaaaatttataggaagatgaaaaaacaatttccattggc 46543047  T
Q  191 tattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaac 261  Q
    ||||| || ||       |||||||  ||||||||| |||| ||||| ||||||||| |||||||||||||    
T  46543046 tattggttgtggagaaaatgaaaga--gagaaaattaaatgcaatttgcatttaattttatgagaataaac 46542978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 88 - 261
Target Start/End: Original strand, 47600030 - 47600206
Alignment:
Q  88 cacatttattaagaaaactaaaacataagaatttgaagtata--attttttgtgttttctt-tgaaaaaagttttataggatgatgtaaaaacaattttc 184  Q
    |||||||||||| |||| ||||||||||||||||  ||||||   ||||||||||  ||||   ||||||||||||||||| ||||||||||||||||||    
T  47600030 cacatttattaaaaaaattaaaacataagaatttagagtatagttttttttgtgtaatcttaaaaaaaaagttttataggaagatgtaaaaacaattttc 47600129  T
Q  185 attgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaac 261  Q
    |||| |||||| |||||       ||||||||  ||||||||||||||||||| ||||||||| |||||||||||||    
T  47600130 attggctattgtttatgaaaaaaatgaaagagaaagaaaattgaatgtaatttgcatttaattttatgagaataaac 47600206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 87 - 261
Target Start/End: Original strand, 13136547 - 13136717
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||| ||||||||||||||||| |||||| ||||||||||||||||| ||||||   |||||||| |||||||||||||||| |||    
T  13136547 tcacacttattaagaaaattaaaacataagaatttggagtatagttttttgtgttttcttt-aaaaaaaaattataggaagatgtaaaaacaatttccat 13136645  T
Q  187 tgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaac 261  Q
    || |||||| |||||       |||||||  ||||||||||||| |||||| ||||||||| ||| |||||||||    
T  13136646 tggctattggttatggaaaaaatgaaaga--gagaaaattgaatataatttgcatttaattttat-agaataaac 13136717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 87 - 261
Target Start/End: Complemental strand, 33431727 - 33431555
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| ||||||||||||||| | |||||||||||| || ||| ||||||||||||| ||| ||||||||||||||||| |||| |||||||||||||||    
T  33431727 tcacacttattaagaaaactagatcataagaatttgtagcatagttttttgtgtttttttttaaaaaagttttataggaggatggaaaaacaattttcat 33431628  T
Q  187 tgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaac 261  Q
    || |||||| ||||        |||||||  ||||||||| ||||||||||  |||| ||| |||||||||||||    
T  33431627 tggctattggttatagagaaaatgaaaga--gagaaaattaaatgtaatttgtatttcattttatgagaataaac 33431555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 98 - 261
Target Start/End: Original strand, 39932576 - 39932739
Alignment:
Q  98 aagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattgactattgat 197  Q
    ||||||||||||||||||||||||| |||||| ||||||||||||| |||  || |||||||||| || ||| ||||||||||||| |||| |||||| |    
T  39932576 aagaaaactaaaacataagaatttggagtatagttttttgtgttttttttttaataagttttataagaagatataaaaacaatttttattggctattggt 39932675  T
Q  198 tatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaac 261  Q
     |||       | |||||| ||||||||||||||||||||  |||||||| |||||||||||||    
T  39932676 catggagaaaataaaagagagagaaaattgaatgtaatttgtatttaattttatgagaataaac 39932739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 93 - 260
Target Start/End: Original strand, 46818501 - 46818668
Alignment:
Q  93 ttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattgacta 192  Q
    ||||||||||||  ||||||||||||||| ||||||| |||||||| |||||||||||||||||||||||||| ||| |||||||||||||||||| |||    
T  46818501 ttattaagaaaagaaaaacataagaatttaaagtatagttttttgtattttctttgaaaaaagttttataggaagatataaaaacaattttcattggcta 46818600  T
Q  193 ttgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaa 260  Q
     |  |||||       |||||  | ||||||| |||| |||||||  |||||||| ||||||||||||    
T  46818601 atagttatggagaaaatgaaattgagagaaaactgaacgtaatttgtatttaattttatgagaataaa 46818668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 87 - 261
Target Start/End: Original strand, 3875012 - 3875188
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||| ||||||||||||||||||||||||   ||||||||||| |||  ||||||||||||||||  |||||||||||||||| ||    
T  3875012 tcacacttattaagaaaagtaaaacataagaatttgaagtata--gttttgtgtttttttttgaaaaagttttataggaatatgtaaaaacaatttttat 3875109  T
Q  187 tgac----tattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaac 261  Q
    || |    ||||| |||||       |||||||| |||||||||||||| ||||| ||||||||| |||||||||||||    
T  3875110 tggctatatattggttatggaaaaaatgaaagagagagaaaattgaatgaaatttgcatttaattttatgagaataaac 3875188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 93 - 261
Target Start/End: Complemental strand, 1820577 - 1820409
Alignment:
Q  93 ttattaagaaaactaaaacataagaatttgaagtataatttt-ttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattgact 191  Q
    |||||||||||||||||||||||||||||| | |||| |||| ||||| ||| |||| |||||||||||||||| |||||||||| ||| ||||||  ||    
T  1820577 ttattaagaaaactaaaacataagaatttggaatatagttttattgtgctttttttggaaaaagttttataggaagatgtaaaaa-aatattcattagct 1820479  T
Q  192 attgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaac 261  Q
     ||| |||||       |||||||| || ||||||||||||||||| ||||||||| |||||||||||||    
T  1820478 tttggttatgaaaaaaatgaaagagagaaaaaattgaatgtaatttgcatttaattttatgagaataaac 1820409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 87 - 247
Target Start/End: Original strand, 24728619 - 24728780
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataatttt-ttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttca 185  Q
    ||||| |||||||||||||||||||||||||||||| || ||| |||| |||||||||||||  || |||||| || ||| |||||||||||||||||||    
T  24728619 tcacacttattaagaaaactaaaacataagaatttgtagcatagtttttttgtgttttctttcgaataagtttcatgggaagatgtaaaaacaattttca 24728718  T
Q  186 ttgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaatt 247  Q
    ||| | ||||||||||       | |||||| ||||||||| |||||||||| |||||||||    
T  24728719 ttggcaattgattatggaaaaaataaaagagagagaaaattaaatgtaatttgcatttaatt 24728780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 87 - 199
Target Start/End: Complemental strand, 52985101 - 52984989
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||||||| ||||||||||||| |||||| |||||||||||||||||| || |||||| |  ||| ||||||||||||||||||||    
T  52985101 tcacacttattaagaaaactaatacataagaatttggagtatagttttttgtgttttctttggaataagtttcacgggaagatgtaaaaacaattttcat 52985002  T
Q  187 tgactattgatta 199  Q
    || ||||||||||    
T  52985001 tggctattgatta 52984989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 98 - 201
Target Start/End: Original strand, 3861699 - 3861802
Alignment:
Q  98 aagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattgactattgat 197  Q
    |||||||||||||||||| |||||||||||||||||||| ||||||||||  || ||||||||| | | |||||||||||||||||||||| ||||||||    
T  3861699 aagaaaactaaaacataataatttgaagtataattttttatgttttctttagaataagttttattgaaagatgtaaaaacaattttcattggctattgat 3861798  T
Q  198 tatg 201  Q
    ||||    
T  3861799 tatg 3861802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 87 - 259
Target Start/End: Complemental strand, 3076463 - 3076291
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||| |||| |||||||||||| || ||| ||||||||||||| |||| || ||||||||| ||| |||||||||| |||||||||    
T  3076463 tcacacttattaagaaaattaaagcataagaatttgtagcatagttttttgtgttttatttggaataagttttatgggaagatgtaaaaataattttcat 3076364  T
Q  187 tgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataa 259  Q
    || | |||| |||||       | |||| | ||||||||| |||||||||| |||||||||  ||||||||||    
T  3076363 tggcaattggttatggaaaaaataaaagtgagagaaaattaaatgtaatttgcatttaatttcatgagaataa 3076291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 106 - 261
Target Start/End: Original strand, 2246026 - 2246181
Alignment:
Q  106 taaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattgactattgattatgnnnn 205  Q
    |||||||| | |||||  |||||| ||||||||||||||||||||| |||||||||||||  ||||||||| ||||||||||| |||||  || ||        
T  2246026 taaaacattaaaatttagagtatagttttttgtgttttctttgaaataagttttataggaatatgtaaaaagaattttcattggctattcgttgtgggga 2246125  T
Q  206 nnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaac 261  Q
       || ||||| ||||||||| |||||||||| ||||||||| |||||||||||||    
T  2246126 aagtggaagagagagaaaattaaatgtaatttgcatttaattttatgagaataaac 2246181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 106 - 261
Target Start/End: Original strand, 37735395 - 37735550
Alignment:
Q  106 taaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattgactattgattatgnnnn 205  Q
    |||||||||||||| ||||||||| |||||||| ||||||||| || |||||| || ||| || |||||||||||||| |||| ||||||||||||        
T  37735395 taaaacataagaatctgaagtatagttttttgtattttctttggaataagtttcatgggaagaagtaaaaacaatttttattggctattgattatggaga 37735494  T
Q  206 nnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaac 261  Q
       || || || |||||||||||||||||||| |||||||||  ||| ||||||||    
T  37735495 aaatggaaaagagagaaaattgaatgtaatttgcatttaatttcatgtgaataaac 37735550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 87 - 201
Target Start/End: Original strand, 44148829 - 44148943
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||| |||||||||| |||||||||||| || ||| |||||||||||||||||| || |||||| || ||| ||||||||||||||||||||    
T  44148829 tcacacttattacgaaaactaaagcataagaatttgtagcatagttttttgtgttttctttggaataagtttcatgggaagatgtaaaaacaattttcat 44148928  T
Q  187 tgactattgattatg 201  Q
    || | |||| |||||    
T  44148929 tggcaattggttatg 44148943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 88 - 162
Target Start/End: Complemental strand, 4672998 - 4672924
Alignment:
Q  88 cacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttata 162  Q
    |||| |||||||||||||||||| ||||||||||| |||||| |||||||| |||||||||||||||||||||||    
T  4672998 cacacttattaagaaaactaaaatataagaatttggagtatagttttttgtattttctttgaaaaaagttttata 4672924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 95 - 201
Target Start/End: Complemental strand, 30221885 - 30221779
Alignment:
Q  95 attaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattgactatt 194  Q
    |||||||||| ||||||||||||| ||| | |||||||||||||||||||||| ||| ||||||||| ||| |||||||||||| |||| ||||  ||||    
T  30221885 attaagaaaattaaaacataagaacttggaatataattttttgtgttttctttaaaataagttttatgggaagatgtaaaaacattttttattggatatt 30221786  T
Q  195 gattatg 201  Q
    | |||||    
T  30221785 ggttatg 30221779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 87 - 201
Target Start/End: Original strand, 32742195 - 32742309
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| ||||||| ||||||||| |||||||||||  |||||| ||||||||||||||||| ||||||||||||||  |  || ||||||||||||||||    
T  32742195 tcacacttattaaaaaaactaaagcataagaattttgagtatagttttttgtgttttctttaaaaaaagttttataaaaaaatataaaaacaattttcat 32742294  T
Q  187 tgactattgattatg 201  Q
    | |  ||||||||||    
T  32742295 taatcattgattatg 32742309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 87 - 195
Target Start/End: Complemental strand, 1035023 - 1034917
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    |||||||||||||||||| |||||||||||||||||  ||||  | |||||||||||||||| || |||||||||  || ||| ||||||||||||||||    
T  1035023 tcacatttattaagaaaattaaaacataagaatttggcgtat--tgttttgtgttttctttggaataagttttatgagaagatataaaaacaattttcat 1034926  T
Q  187 tgactattg 195  Q
     ||||||||    
T  1034925 cgactattg 1034917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 87 - 188
Target Start/End: Complemental strand, 50176690 - 50176589
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||||||||||||||||||||||||||  | |||| |  ||| ||||||||||| ||||||||| || |||||||||| ||||||||||||||||| ||    
T  50176690 tcacatttattaagaaaactaaaacatagtagtttgtaacatagttttttgtgttatctttgaaataaattttataggaagatgtaaaaacaatttttat 50176591  T
Q  187 tg 188  Q
    ||    
T  50176590 tg 50176589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 134 - 258
Target Start/End: Original strand, 10558796 - 10558920
Alignment:
Q  134 tttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattgactattgattatgnnnnnnntgaaagagggagaaaattgaatgta 233  Q
    ||||||||||||||| || || |||||| ||| |||||||||||||||||||||| ||||||||||||       || ||||| || |||||| ||||||    
T  10558796 tttgtgttttctttggaataatttttatgggaagatgtaaaaacaattttcattggctattgattatggagaaaatggaagagagaaaaaatttaatgta 10558895  T
Q  234 attttcatttaattctatgagaata 258  Q
    |||| |||||||||  |||||||||    
T  10558896 atttacatttaatttcatgagaata 10558920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 112 - 261
Target Start/End: Complemental strand, 25391824 - 25391678
Alignment:
Q  112 ataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattgactattgattatgnnnnnnntga 211  Q
    |||||||||||||||||||||||||||||||||||| | | |||||||||| ||  ||||||||||||||||||||| ||| |  |||||       ||     
T  25391824 ataagaatttgaagtataattttttgtgttttcttt-agataagttttatatgaaaatgtaaaaacaattttcattggctaatagttatg-gagaagtgg 25391727  T
Q  212 aagagggagaaaattgaatgtaattttcatttaattctatgagaataaac 261  Q
    |||||  | ||||||||||||||||| ||||||||| |||||||||||||    
T  25391726 aagagata-aaaattgaatgtaatttgcatttaattttatgagaataaac 25391678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 87 - 243
Target Start/End: Original strand, 7875933 - 7876091
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaa--aaaagttttataggatgatgtaaaaacaattttc 184  Q
    ||||| |||||||||||| ||||| |||| |||||||| |||| ||||||||||||||||||||       |||||||| | |||||||||| ||||||     
T  7875933 tcacacttattaagaaaattaaaatataaaaatttgaattatagttttttgtgttttctttgaatttttttttttatagaaagatgtaaaaataattttt 7876032  T
Q  185 attgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcattt 243  Q
    ||||||||||| |||||       | |||||| |||||||||||||||||||| |||||    
T  7876033 attgactattggttatggaaaaaataaaagagagagaaaattgaatgtaatttgcattt 7876091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 87 - 188
Target Start/End: Original strand, 30701378 - 30701479
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| ||||||| ||||||||||||||  | |||| |  ||||||||||||||| ||||||||| ||||||||||||| ||||| |||| |||||||||    
T  30701378 tcacacttattaaaaaaactaaaacatagtagtttgtaacataattttttgtgttatctttgaaataagttttataggaagatgtgaaaataattttcat 30701477  T
Q  187 tg 188  Q
    ||    
T  30701478 tg 30701479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 145 - 256
Target Start/End: Complemental strand, 16854250 - 16854139
Alignment:
Q  145 tttgaaaaaagttttataggatgatgtaaaaacaattttcattgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcattta 244  Q
    ||||||||||||||||| ||| | ||||||||||||||| |||| |||||| |||||       |||||||| || |||||| |||||||||| ||||||    
T  16854250 tttgaaaaaagttttattggaaggtgtaaaaacaatttttattggctattggttatggagaaaatgaaagagagataaaattaaatgtaatttgcattta 16854151  T
Q  245 attctatgagaa 256  Q
    ||| ||||||||    
T  16854150 attttatgagaa 16854139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 87 - 188
Target Start/End: Complemental strand, 7397874 - 7397773
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| ||||||| |||||||||| |||  | |||| |  ||| ||||||||||| ||||||||| || |||||||||| ||||||||||||||||||||    
T  7397874 tcacacttattaaaaaaactaaaatatagtagtttgtaacatagttttttgtgttatctttgaaataaattttataggaagatgtaaaaacaattttcat 7397775  T
Q  187 tg 188  Q
    ||    
T  7397774 tg 7397773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 87 - 188
Target Start/End: Complemental strand, 35884375 - 35884274
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||||||||||||||||||||  | ||  ||||||| ||||||||||||||||| | ||||||| || |||||| | | |||||||||| |||||||||    
T  35884375 tcacatttattaagaaaactaactcttagtaatttgaggtataattttttgtgttctttttgaaataaattttatggaaagatgtaaaaataattttcat 35884276  T
Q  187 tg 188  Q
    ||    
T  35884275 tg 35884274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 87 - 188
Target Start/End: Original strand, 45840059 - 45840159
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| ||||||||||||||||||||||| | |||| |  ||| ||||||||||| | ||||||| | ||||||||||| |||| |||||||||||||||    
T  45840059 tcacacttattaagaaaactaaaacataatagtttgtaacatagttttttgtgttatttttgaaatatgttttataggaagatg-aaaaacaattttcat 45840157  T
Q  187 tg 188  Q
    ||    
T  45840158 tg 45840159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 89 - 201
Target Start/End: Original strand, 47302903 - 47303012
Alignment:
Q  89 acatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattg 188  Q
    |||||| ||||||||||||||| ||||||| ||| |||||||  ||||||||||| || | || |||||| |||||| ||||| |||| |||||||||||    
T  47302903 acatttgttaagaaaactaaaatataagaaattggagtataa--ttttgtgtttttttaggaataagtttcataggaagatgt-aaaataattttcattg 47302999  T
Q  189 actattgattatg 201  Q
     ||||||||||||    
T  47303000 gctattgattatg 47303012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 87 - 236
Target Start/End: Complemental strand, 50370118 - 50369981
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||||||||||| |||| ||||| |||||||||||||||||         ||||||  |||||||||||||||||||| ||||||||||||||||  ||    
T  50370118 tcacatttattaaaaaaattaaaatataagaatttgaagtat---------tgtttt--ttgaaaaaagttttataggaagatgtaaaaacaatttctat 50370030  T
Q  187 tgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaatt 236  Q
    || |||||| |||||       |||||||| |||||||||||||||||||    
T  50370029 tggctattggttatg-aaaaaatgaaagagagagaaaattgaatgtaatt 50369981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 87 - 189
Target Start/End: Complemental strand, 35942005 - 35941903
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||||||| || |||  |||||| ||||||||||||||| | || |||||| ||||||||| | | ||||||| || |||||||||    
T  35942005 tcacacttattaagaaaactaacacttaattatttgaggtataattttttgtgctctccttgaaataagttttatggaaagatgtaataataattttcat 35941906  T
Q  187 tga 189  Q
    |||    
T  35941905 tga 35941903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 87 - 188
Target Start/End: Original strand, 43656033 - 43656134
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||||||| || ||   |||||| ||||||||||||||||| || |||||| |||||| || | | |||||||||| |||||||||    
T  43656033 tcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttgaaataagtttcatggaaagatgtaaaaataattttcat 43656132  T
Q  187 tg 188  Q
    ||    
T  43656133 tg 43656134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 87 - 188
Target Start/End: Original strand, 52841438 - 52841539
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    |||||||||||||||||||||||||| || | |||| |||||| ||| |||| || || || ||| |||||| |||| | ||||| ||||||||||||||    
T  52841438 tcacatttattaagaaaactaaaacacaatagtttgtagtatagtttcttgtcttatccttaaaataagtttcatagaaagatgttaaaacaattttcat 52841537  T
Q  187 tg 188  Q
    ||    
T  52841538 tg 52841539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 93 - 188
Target Start/End: Original strand, 25185302 - 25185398
Alignment:
Q  93 ttattaagaaaactaaaacataagaatttgaagtata-attttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattg 188  Q
    ||||||||||||||||||||||  | |||| |  |||  ||||||||||| ||||||||| ||||||||||||| ||||| ||||||| ||||||||    
T  25185302 ttattaagaaaactaaaacatagtagtttgtaacatagtttttttgtgttatctttgaaataagttttataggaagatgtgaaaacaactttcattg 25185398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 87 - 201
Target Start/End: Original strand, 32318553 - 32318667
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaa-aagttttataggatgatgtaaaaacaattttca 185  Q
    ||||| ||||||| |||| ||||| |||| |||||| ||||||||||||| | |||| |||  ||| ||||||||| ||| |||||||||||||||||||    
T  32318553 tcacaattattaa-aaaattaaaatataaaaatttggagtataattttttcttttttgtttttaaataagttttattggaagatgtaaaaacaattttca 32318651  T
Q  186 ttgactattgattatg 201  Q
    |||  ||||| |||||    
T  32318652 ttggttattggttatg 32318667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 87 - 188
Target Start/End: Complemental strand, 5950610 - 5950506
Alignment:
Q  87 tcacatttattaagaaaactaaaacataag---aatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaatttt 183  Q
    ||||| ||||||||||||||||||||||     | |||| |  ||| ||| ||||||| || |||||| ||||||||||||| |||||||||||||||||    
T  5950610 tcacacttattaagaaaactaaaacatactcgtagtttgcaacatagtttcttgtgttatccttgaaataagttttataggaagatgtaaaaacaatttt 5950511  T
Q  184 cattg 188  Q
    |||||    
T  5950510 cattg 5950506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 126 - 188
Target Start/End: Original strand, 8889729 - 8889791
Alignment:
Q  126 tataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattg 188  Q
    |||| ||| ||||||| || |||||| ||||||||||||| ||||||||||||||||||||||    
T  8889729 tatagtttattgtgttatccttgaaataagttttataggaagatgtaaaaacaattttcattg 8889791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 91 - 201
Target Start/End: Original strand, 298665 - 298776
Alignment:
Q  91 atttattaagaaaactaaaacat--aagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattg 188  Q
    |||||||||||||||||||||||  || || |||||||||| |||  ||||||||||||  || ||| ||||| ||| ||||||||||  ||||| ||||    
T  298665 atttattaagaaaactaaaacataaaataacttgaagtatagtttgatgtgttttctttagaataag-tttatgggaagatgtaaaaattattttaattg 298763  T
Q  189 actattgattatg 201  Q
     ||||||||||||    
T  298764 gctattgattatg 298776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 135 - 200
Target Start/End: Original strand, 5858412 - 5858477
Alignment:
Q  135 ttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattgactattgattat 200  Q
    ||||||| || |||||| ||||||||||||| ||| |||||||||||||||||| |||||| ||||    
T  5858412 ttgtgttatccttgaaataagttttataggaagatataaaaacaattttcattggctattggttat 5858477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 87 - 188
Target Start/End: Complemental strand, 15285967 - 15285866
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||||||| || ||   |||||||||||||||||||||||| || |||||| |||||| || | |  ||||||||| |||| ||||    
T  15285967 tcacacttattaagaaaactaacacttagtgatttgaagtataattttttgtgttctccttgaaataagtttcatggaaatatgtaaaaataattctcat 15285868  T
Q  187 tg 188  Q
    ||    
T  15285867 tg 15285866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 146 - 199
Target Start/End: Complemental strand, 15912307 - 15912254
Alignment:
Q  146 ttgaaaaaagttttataggatgatgtaaaaacaattttcattgactattgatta 199  Q
    |||||| ||||||||||||| ||||||||||||||||||||||| | |||||||    
T  15912307 ttgaaataagttttataggaagatgtaaaaacaattttcattgattgttgatta 15912254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 131 - 188
Target Start/End: Complemental strand, 16688260 - 16688203
Alignment:
Q  131 ttttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattg 188  Q
    |||||| |||| | ||||||| ||||||||||||| ||||||||||||||||||||||    
T  16688260 ttttttatgttatttttgaaataagttttataggaagatgtaaaaacaattttcattg 16688203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 139 - 261
Target Start/End: Original strand, 23392211 - 23392332
Alignment:
Q  139 gttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaatttt 238  Q
    |||||||||| || ||||||||||| |  || |||||| |||||||||||||||||| |||||       || ||||  ||||||||| ||||||||||     
T  23392211 gttttctttggaataagttttatagaaaaatataaaaataattttcattgactattggttatggagaaaatggaagaaagagaaaatt-aatgtaatttg 23392309  T
Q  239 catttaattctatgagaataaac 261  Q
    |||||||||  ||||||||||||    
T  23392310 catttaatttcatgagaataaac 23392332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 87 - 188
Target Start/End: Original strand, 23873823 - 23873924
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||||||| || ||   |||||| ||||||||||||||||| || ||| || |||||| || | | |||||||||| |||||||||    
T  23873823 tcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaataagtttcatggaaagatgtaaaaataattttcat 23873922  T
Q  187 tg 188  Q
    ||    
T  23873923 tg 23873924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 87 - 188
Target Start/End: Complemental strand, 25990912 - 25990811
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    |||||||||||||||||||||| || ||   |||||| ||||||||||||||||| || ||| || |||||| || | |  ||||||||| |||||||||    
T  25990912 tcacatttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaataagtttcatggaaatatgtaaaaataattttcat 25990813  T
Q  187 tg 188  Q
    ||    
T  25990812 tg 25990811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 87 - 188
Target Start/End: Complemental strand, 37538977 - 37538876
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||| ||||| |||  | |||| |  ||| ||| ||||||| || |||||| ||||||||||||| |||||||| |||||||||||    
T  37538977 tcacacttattaagaaaattaaaatatagtagtttgcaacatagtttcttgtgttatccttgaaataagttttataggaagatgtaaagacaattttcat 37538878  T
Q  187 tg 188  Q
    ||    
T  37538877 tg 37538876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 87 - 188
Target Start/End: Original strand, 38942437 - 38942538
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||||||| || ||   |||||| ||||||||||||||||| || ||| || |||||| || | | |||||||||| |||||||||    
T  38942437 tcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaataagtttcatggaaagatgtaaaaataattttcat 38942536  T
Q  187 tg 188  Q
    ||    
T  38942537 tg 38942538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 131 - 188
Target Start/End: Complemental strand, 43765418 - 43765361
Alignment:
Q  131 ttttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattg 188  Q
    |||||||||||||||||  || ||||||||||||| |||||||||||| |||||||||    
T  43765418 ttttttgtgttttctttagaataagttttataggaagatgtaaaaacatttttcattg 43765361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 131 - 200
Target Start/End: Original strand, 44510256 - 44510325
Alignment:
Q  131 ttttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattgactattgattat 200  Q
    ||||||||||| | ||||||| || |||||||||| | |||||||||||||||||||||  |||||||||    
T  44510256 ttttttgtgttatttttgaaataaattttataggaagttgtaaaaacaattttcattgataattgattat 44510325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 87 - 188
Target Start/End: Complemental strand, 46949485 - 46949384
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    |||||||||||||||||||||| || ||   ||||||  |||||||||||||||| || ||| || |||||| || | | |||||||||| |||||||||    
T  46949485 tcacatttattaagaaaactaacacttagtgatttgagatataattttttgtgttctccttggaataagtttcatggaaagatgtaaaaataattttcat 46949386  T
Q  187 tg 188  Q
    ||    
T  46949385 tg 46949384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 87 - 188
Target Start/End: Original strand, 51338891 - 51338991
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||||||||||||||| |||||| ||   |||||| ||||| | || ||||||| ||||||||| |||||| |||| | ||||||||| ||||||||||    
T  51338891 tcacatttattaagaaa-ctaaaatattgtaatttgtagtatgacttcttgtgttgtctttgaaataagtttcatagaaagatgtaaaatcaattttcat 51338989  T
Q  187 tg 188  Q
    ||    
T  51338990 tg 51338991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 149 - 188
Target Start/End: Complemental strand, 13351786 - 13351747
Alignment:
Q  149 aaaaaagttttataggatgatgtaaaaacaattttcattg 188  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  13351786 aaaaaagttttataggaagatgtaaaaacaattttcattg 13351747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 94 - 165
Target Start/End: Complemental strand, 13352255 - 13352184
Alignment:
Q  94 tattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttatagga 165  Q
    |||||||||||||||||||||  | ||||    ||||||||||||||| ||||||||| |||||||||||||    
T  13352255 tattaagaaaactaaaacatagtagtttgttacataattttttgtgttatctttgaaataagttttatagga 13352184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 93 - 188
Target Start/End: Original strand, 35366202 - 35366297
Alignment:
Q  93 ttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattg 188  Q
    ||||||||||||||||||||||  | |||| |  ||| ||| ||||||| || |||||| || |||||||| | ||||||||||||||||| ||||    
T  35366202 ttattaagaaaactaaaacatagtagtttgcaacatagtttcttgtgttatcgttgaaataaattttatagaaagatgtaaaaacaattttaattg 35366297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 87 - 181
Target Start/End: Original strand, 26907087 - 26907181
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaatt 181  Q
    ||||| |||||||||||||||| || |||  |||||| ||||||||||||||||| || ||| || |||||| || | | |||||||||| ||||    
T  26907087 tcacacttattaagaaaactaatacttaatgatttgaggtataattttttgtgttctccttggaataagtttcatggaaagatgtaaaaataatt 26907181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 154 - 260
Target Start/End: Original strand, 6787050 - 6787155
Alignment:
Q  154 agttttataggatgatgtaaaaacaattttcattgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatga 253  Q
    |||||||||||| |||||||||| |||||| |||| |||||| |||||       |||||||| ||| |||||||||||| ||| |||||| || || ||    
T  6787050 agttttataggaagatgtaaaaataatttttattggctattggttatggaaaaaatgaaagagagag-aaattgaatgtagtttgcatttatttttacga 6787148  T
Q  254 gaataaa 260  Q
    |||||||    
T  6787149 gaataaa 6787155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 131 - 188
Target Start/End: Complemental strand, 16661639 - 16661583
Alignment:
Q  131 ttttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattg 188  Q
    ||||||||||| ||||||||| |||||| |||||| ||||||||||||||||| ||||    
T  16661639 ttttttgtgttatctttgaaataagttt-ataggaggatgtaaaaacaatttttattg 16661583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 87 - 188
Target Start/End: Original strand, 28916511 - 28916612
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||||||| || ||   |||||| ||||||||||||||||| |  ||| || |||||| || | | |||||||||| |||||||||    
T  28916511 tcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttcttcttggaataagtttcatggaaagatgtaaaaataattttcat 28916610  T
Q  187 tg 188  Q
    ||    
T  28916611 tg 28916612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 87 - 188
Target Start/End: Original strand, 40935609 - 40935710
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    |||||||||||||||||||||| || ||   |||||| |||| |||||||||||| || ||| || |||||| || | | |||||||||| |||| ||||    
T  40935609 tcacatttattaagaaaactaacacttagtgatttgaggtatgattttttgtgttctccttggaataagtttcatggaaagatgtaaaaataattctcat 40935708  T
Q  187 tg 188  Q
    ||    
T  40935709 tg 40935710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 87 - 188
Target Start/End: Complemental strand, 49924583 - 49924482
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||||||| || ||   |||||| ||||||||||||||||| |  |||||| |||||| || | | |||||||||| |||| ||||    
T  49924583 tcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttcttcttgaaataagtttcatggaaagatgtaaaaataattctcat 49924484  T
Q  187 tg 188  Q
    ||    
T  49924483 tg 49924482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 221 - 261
Target Start/End: Complemental strand, 11241077 - 11241037
Alignment:
Q  221 aaaattgaatgtaattttcatttaattctatgagaataaac 261  Q
    ||||||||||||||||| ||||||||| |||||||||||||    
T  11241077 aaaattgaatgtaatttacatttaattttatgagaataaac 11241037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 118 - 188
Target Start/End: Complemental strand, 18852356 - 18852286
Alignment:
Q  118 atttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattg 188  Q
    |||||| ||||||||||||||||| || |||||| |||||| || | | |||||||||| |||| ||||||    
T  18852356 atttgaggtataattttttgtgttctccttgaaataagtttcatggaaagatgtaaaaataattctcattg 18852286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 87 - 188
Target Start/End: Complemental strand, 35189366 - 35189264
Alignment:
Q  87 tcacatttattaagaaaa-ctaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttca 185  Q
    |||||||||||||||||| |||| || ||  ||||||| |||||||||||| |||| |  |||||| |||||| || | |  ||||||||| ||||||||    
T  35189366 tcacatttattaagaaaaactaacacttagtaatttgaggtataattttttatgttcttcttgaaataagtttcatggaaatatgtaaaaataattttca 35189267  T
Q  186 ttg 188  Q
    |||    
T  35189266 ttg 35189264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 87 - 201
Target Start/End: Complemental strand, 36384092 - 36383978
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||  |||||||| | |||||||  |||||||||||||||| | |||| || || ||| || | | ||| ||||||||||| ||||    
T  36384092 tcacacttattaagaaagttaaaacattataatttgagatataattttttgtgttatttttggaataaatttcatggaaagatataaaaacaattatcat 36383993  T
Q  187 tgactattgattatg 201  Q
    || ||| | ||||||    
T  36383992 tggctaattattatg 36383978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 87 - 181
Target Start/End: Original strand, 39026242 - 39026336
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaatt 181  Q
    |||||||||||||||||||||| || |    |||||| ||||||||||||||||| |  |||||| |||||| || | | |||||||||| ||||    
T  39026242 tcacatttattaagaaaactaacacttggtgatttgatgtataattttttgtgttcttcttgaaataagtttcatggaaagatgtaaaaataatt 39026336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 93 - 183
Target Start/End: Original strand, 46803670 - 46803760
Alignment:
Q  93 ttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaatttt 183  Q
    ||||||||||||| ||||||||  | |||| |  ||| ||||||||||| || ||| || |||||| |||| | |||||||||||||||||    
T  46803670 ttattaagaaaaccaaaacatagtagtttgcaacatagttttttgtgttatccttgcaataagtttcatagaaagatgtaaaaacaatttt 46803760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 219 - 261
Target Start/End: Complemental strand, 50012627 - 50012585
Alignment:
Q  219 agaaaattgaatgtaattttcatttaattctatgagaataaac 261  Q
    ||||||||||||||||||| ||||||||| ||| |||||||||    
T  50012627 agaaaattgaatgtaatttgcatttaattttataagaataaac 50012585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 87 - 188
Target Start/End: Original strand, 40960470 - 40960571
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    |||||||||||||||||||||| || ||   |||||| | || |||||||||||| || ||| || |||||| || | | |||||||||| |||| ||||    
T  40960470 tcacatttattaagaaaactaacacttagtgatttgaggcatgattttttgtgttctccttggaataagtttcatggaaagatgtaaaaataattctcat 40960569  T
Q  187 tg 188  Q
    ||    
T  40960570 tg 40960571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 93 - 141
Target Start/End: Complemental strand, 18036702 - 18036654
Alignment:
Q  93 ttattaagaaaactaaaacataagaatttgaagtataattttttgtgtt 141  Q
    |||||||||||||||| || |||  |||||| |||||||||||||||||    
T  18036702 ttattaagaaaactaacacttaatgatttgaggtataattttttgtgtt 18036654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 119; Significance: 2e-60; HSPs: 60)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 87 - 327
Target Start/End: Original strand, 11261877 - 11262117
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||| ||||||| |||| |||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  11261877 tcacacttattaagtaaactaacacatgagaatttggagtataattttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaattttcat 11261976  T
Q  187 tgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaacnnnnnnnntattgaaaaagataaaa 286  Q
    || |||||| |||||       |||||||  |||||||||||||||||||| ||||||||| |||||||||||||        | ||| |||||||||||    
T  11261977 tggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataaacaaaaaaaatcttggaaaagataaaa 11262076  T
Q  287 gtttgtcnnnnnnncttatattttgggacaaagaaaatgtg 327  Q
    |||||||       |||||||||||||||||||||||||||    
T  11262077 gtttgtcttttttacttatattttgggacaaagaaaatgtg 11262117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 87 - 261
Target Start/End: Complemental strand, 20644182 - 20644008
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||    
T  20644182 tcacacttattaagaaaactaaaacataagaatttggagtataattttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 20644083  T
Q  187 tgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaac 261  Q
    || |||||| |||||       |||||||| | |||||||||||||||||| |||||||||  ||||||||||||    
T  20644082 tggctattggttatggaaaaaatgaaagagagggaaaattgaatgtaatttgcatttaatttcatgagaataaac 20644008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 87 - 259
Target Start/End: Complemental strand, 6686553 - 6686380
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttcttt-gaaaaaagttttataggatgatgtaaaaacaattttca 185  Q
    |||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  6686553 tcacatttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttggaaaaaagttttataggaagatgtaaaaacaattttca 6686454  T
Q  186 ttgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataa 259  Q
    ||| |||||| |||||       |||||||  |||||||||||||||||||| ||||||||| |||||||||||    
T  6686453 ttggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 6686380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 88 - 261
Target Start/End: Complemental strand, 34425497 - 34425325
Alignment:
Q  88 cacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcatt 187  Q
    |||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  34425497 cacacttattaagaaaactaaaacataagaatttgaagtatagttttttgtgttttctttgaaaaaagttttataggaatatgtaaaaacaattttcatt 34425398  T
Q  188 gactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaac 261  Q
    | ||||||||||||       | |||||| ||||||||||||| |||||| ||||||||| |||||||||||||    
T  34425397 ggctattgattatg-gaaaaataaaagagagagaaaattgaatataatttgcatttaattttatgagaataaac 34425325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 87 - 327
Target Start/End: Original strand, 43589955 - 43590195
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||||||||||||||||||||| |||||| |||||||||||||||||  |||||||||||||||  ||||||||||||||||||||    
T  43589955 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttcttttgaaaaagttttatagggagatgtaaaaacaattttcat 43590054  T
Q  187 tgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaacnnnnnnnntattgaaaaagataaaa 286  Q
    || |||||| |||||       |||||||  |||||||||||||||||||| ||||||||| |||||||||||          | |||||||||||||||    
T  43590055 tggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataacaaaaaaaaatcttgaaaaagataaaa 43590154  T
Q  287 gtttgtcnnnnnnncttatattttgggacaaagaaaatgtg 327  Q
    ||||||        |||||||||||| ||||||||||||||    
T  43590155 gtttgtattttttgcttatattttggtacaaagaaaatgtg 43590195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 87 - 327
Target Start/End: Original strand, 37562754 - 37562995
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtg-ttttctttgaaaaaagttttataggatgatgtaaaaacaattttca 185  Q
    ||||| |||||||||||||||||||||||||||||| |||||| ||||||||| |||| |||| |||||||||||||||| |||||||||||||||||||    
T  37562754 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgtttttttttggaaaaagttttataggaagatgtaaaaacaattttca 37562853  T
Q  186 ttgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaacnnnnnnnntattgaaaaagataaa 285  Q
    ||  |||||| |||||       |||||||  |||||||||||||||||||| ||||||||| |||||||||||||        |  || ||||||||||    
T  37562854 ttagctattgtttatggaaaaaatgaaagacagagaaaattgaatgtaatttgcatttaattttatgagaataaacaaaaaaaatcatggaaaagataaa 37562953  T
Q  286 agtttgtcnnnnnnncttatattttgggacaaagaaaatgtg 327  Q
    ||||||||       ||||||||||||||| |||||||||||    
T  37562954 agtttgtcttttttgcttatattttgggacgaagaaaatgtg 37562995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 87 - 261
Target Start/End: Complemental strand, 42273815 - 42273643
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||||||||||||||||||||| |||||| |||||||||||||||||| ||||||||||||| || ||||||||||||||||||||    
T  42273815 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataagaagatgtaaaaacaattttcat 42273716  T
Q  187 tgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaac 261  Q
    || |||||| |||||       |||||||  |||||||||||||| ||||| ||||||||| |||||||||||||    
T  42273715 tggctattggttatggagaaaatgaaaga--gagaaaattgaatgcaatttgcatttaattttatgagaataaac 42273643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 87 - 257
Target Start/End: Complemental strand, 20039270 - 20039100
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||||| ||    
T  20039270 tcacacttattaagaaaactaaaacataagaatttggagtataattttttgtgttttctttgaaaaaggttttataggaagatgtaaaaccaatttttat 20039171  T
Q  187 tgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaat 257  Q
    || |||||| |||||       ||||||||  |||||||| |||||||||| ||||||||| |||||||||    
T  20039170 tggctattggttatgaaaaaaatgaaagagatagaaaattaaatgtaatttgcatttaattttatgagaat 20039100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 97 - 327
Target Start/End: Original strand, 37522592 - 37522823
Alignment:
Q  97 taagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattgactattga 196  Q
    |||||||||||||||||||||||||| |||||| ||||||||||||| |||| |||||||||||||||| |||||||||||||||||||||| ||||||     
T  37522592 taagaaaactaaaacataagaatttggagtatagttttttgtgttttttttggaaaaagttttataggaagatgtaaaaacaattttcattggctattgt 37522691  T
Q  197 ttatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaa-ttctatgagaataaacnnnnnnnntattgaaaaagataaaagtttgtcnn 295  Q
    |||||       |||||||  |||||||||||||||||||| ||||||| || |||||||||| ||        |  || ||||||||||||||||||      
T  37522692 ttatggaaaaaatgaaagacagagaaaattgaatgtaatttgcatttaatttttatgagaatagacaaaaaaaatcatggaaaagataaaagtttgtctt 37522791  T
Q  296 nnnnncttatattttgggacaaagaaaatgtg 327  Q
         ||||||||||||||| |||||||||||    
T  37522792 ttttgcttatattttgggacgaagaaaatgtg 37522823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 113 - 261
Target Start/End: Complemental strand, 32111144 - 32110996
Alignment:
Q  113 taagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattgactattgattatgnnnnnnntgaa 212  Q
    |||||||||| |||||||| |||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||| |||||       ||||    
T  32111144 taagaatttggagtataatgttttgtgttttctttgaaaaaagtttcataggaagatgtaaaaacaattttcattgactattggttatggaaaatatgaa 32111045  T
Q  213 agagggagaaaattgaatgtaattttcatttaattctatgagaataaac 261  Q
    |||| ||||||||| |||||||||| ||||||||| |||||||||||||    
T  32111044 agagagagaaaattaaatgtaatttgcatttaattttatgagaataaac 32110996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 93 - 261
Target Start/End: Original strand, 43454322 - 43454490
Alignment:
Q  93 ttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattgacta 192  Q
    |||||||||||| ||||||||||||| ||||| |||| ||||||||||||||||||  | |||||||||||||  |||||||||||||||||||| ||||    
T  43454322 ttattaagaaaattaaaacataagaacttgaaatatagttttttgtgttttctttgtcataagttttataggaatatgtaaaaacaattttcatttacta 43454421  T
Q  193 ttgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaac 261  Q
    ||| ||| |       | |||||| |||||||||||||||||||| ||||||||||||||||| |||||    
T  43454422 ttggttaagaagaaaataaaagagagagaaaattgaatgtaatttacatttaattctatgagattaaac 43454490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 94 - 261
Target Start/End: Original strand, 38130113 - 38130283
Alignment:
Q  94 tattaagaaaactaaaacataagaatttgaagtataat---tttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattgac 190  Q
    ||||||||||||||||||||||||||||| | |||| |   ||||||||||||||||  ||||||||||||||||  ||||||||| ||||||||||| |    
T  38130113 tattaagaaaactaaaacataagaatttggaatatagtagttttttgtgttttctttagaaaaagttttataggaatatgtaaaaataattttcattggc 38130212  T
Q  191 tattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaac 261  Q
    ||||| |||||       |||||||| |||||||||||||||||| | ||||||||| |||||||||||||    
T  38130213 tattggttatggaaaaaatgaaagagagagaaaattgaatgtaatctacatttaattttatgagaataaac 38130283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 87 - 259
Target Start/End: Complemental strand, 25841032 - 25840860
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| ||||||||||||||||| ||||| |||||| || ||| |||||||||||||||||| || |||||| || ||| ||||||||||||||||||||    
T  25841032 tcacacttattaagaaaactaaagcataaaaatttgtagcatagttttttgtgttttctttggaataagtttcatgggaagatgtaaaaacaattttcat 25840933  T
Q  187 tgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataa 259  Q
    |||| |||| |||||       | |||||| ||||||||| |||||||||| |||||||||  ||||||||||    
T  25840932 tgacaattgtttatggaaaaaataaaagagagagaaaattaaatgtaatttgcatttaatttcatgagaataa 25840860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 91 - 258
Target Start/End: Complemental strand, 19413305 - 19413138
Alignment:
Q  91 atttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattgac 190  Q
    |||||||||||||||||||  ||||||||||| || ||| ||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||| |    
T  19413305 atttattaagaaaactaaagtataagaatttgtagcatagttttttgtgttttctttgaaataagttttatgggaagatgtaaaaacaattttcattggc 19413206  T
Q  191 tattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaata 258  Q
     |||| |||||       | |||||| | ||||||| |||||||||| |||||||||  |||||||||    
T  19413205 aattggttatggaaaaaataaaagagagggaaaattaaatgtaatttgcatttaatttcatgagaata 19413138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 133 - 261
Target Start/End: Complemental strand, 38280969 - 38280841
Alignment:
Q  133 ttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattgactattgattatgnnnnnnntgaaagagggagaaaattgaatgt 232  Q
    ||||||| |||||||||||||||||||||||||  |||||||||||||||||||||  |||||||||||       |||||||| ||||||||||||| |    
T  38280969 ttttgtgctttctttgaaaaaagttttataggaaaatgtaaaaacaattttcattggttattgattatggaaaaaatgaaagagagagaaaattgaatat 38280870  T
Q  233 aattttcatttaattctatgagaataaac 261  Q
    ||||| ||||||||| |||||||||||||    
T  38280869 aatttgcatttaattttatgagaataaac 38280841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 87 - 259
Target Start/End: Complemental strand, 17351556 - 17351384
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    |||||||||||||||||||||| || ||| || ||| |||||| |||||| | ||||| ||| || ||||||||| | | ||||||||||||||||| ||    
T  17351556 tcacatttattaagaaaactaatacgtaaaaacttggagtatagttttttttattttcgttggaataagttttatggaaagatgtaaaaacaattttaat 17351457  T
Q  187 tgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataa 259  Q
    || ||||||||||||       ||| | || ||||||||||||||||||||||||||||||  ||||||||||    
T  17351456 tggctattgattatggagaaaatgacatagagagaaaattgaatgtaattttcatttaatttcatgagaataa 17351384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 87 - 201
Target Start/End: Complemental strand, 23233579 - 23233465
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| ||||| ||||| ||||||||||||||||||| ||||| |||||||||||||||||||||| |  |||||||||  ||||||||||| |||| ||    
T  23233579 tcacacttattgagaaatctaaaacataagaatttgacgtatagttttttgtgttttctttgaaaacaactttataggaatatgtaaaaacagtttttat 23233480  T
Q  187 tgactattgattatg 201  Q
    | ||||||| |||||    
T  23233479 taactattggttatg 23233465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 99 - 201
Target Start/End: Original strand, 41625517 - 41625618
Alignment:
Q  99 agaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattgactattgatt 198  Q
    ||||||||||||||||||||||| || |||| ||||||||||||||||||||| |||||| |||||| ||||||||||  |||||||||  |||||||||    
T  41625517 agaaaactaaaacataagaatttaaa-tatagttttttgtgttttctttgaaataagtttcataggaagatgtaaaaattattttcattcgctattgatt 41625615  T
Q  199 atg 201  Q
    |||    
T  41625616 atg 41625618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 93 - 188
Target Start/End: Original strand, 12912294 - 12912388
Alignment:
Q  93 ttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattg 188  Q
    ||||||||||||||||||||||  | || ||| |||| ||||||||||| ||||||||| ||||||||||||| ||||||||||||||||||||||    
T  12912294 ttattaagaaaactaaaacatagtagttggaa-tatagttttttgtgttatctttgaaataagttttataggaagatgtaaaaacaattttcattg 12912388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 109 - 261
Target Start/End: Complemental strand, 8225608 - 8225457
Alignment:
Q  109 aacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgt-aaaaacaattttcattgactattgattatgnnnnnn 207  Q
    |||| ||||||||| | |||| |||||||| ||||||||| ||||||||||||||||  |||| ||||| || |||||||| |||||| |||||          
T  8225608 aacaaaagaatttggactatagttttttgtattttctttggaaaaagttttataggaaaatgtaaaaaaaaaatttcattggctattggttatggaaaaa 8225509  T
Q  208 ntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaac 261  Q
     |||||||  |||||||||||| ||||||| ||||||||| |||||||||||||    
T  8225508 atgaaaga--gagaaaattgaacgtaatttgcatttaattttatgagaataaac 8225457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 106 - 247
Target Start/End: Original strand, 42104262 - 42104401
Alignment:
Q  106 taaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattgactattgattatgnnnn 205  Q
    ||||||||||||||||| |||||||||||  ||||| |||||| || |||||| || ||| |||||||||||||||||||||| ||||| ||||||        
T  42104262 taaaacataagaatttggagtataatttt--gtgttctctttggaacaagtttcatgggaagatgtaaaaacaattttcattggctattaattatggaga 42104359  T
Q  206 nnntgaaagagggagaaaattgaatgtaattttcatttaatt 247  Q
       || ||||| || ||||||||||||| ||| |||||||||    
T  42104360 aaatggaagagtgataaaattgaatgtattttgcatttaatt 42104401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 112 - 200
Target Start/End: Original strand, 5984126 - 5984214
Alignment:
Q  112 ataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattgactattgattat 200  Q
    ||||||||||  |||||| |||||||||||||||||| || ||||||||||| |  |||||||||||||||||||||||||||| ||||    
T  5984126 ataagaatttagagtatagttttttgtgttttctttggaataagttttatagaaatatgtaaaaacaattttcattgactattggttat 5984214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 150 - 261
Target Start/End: Complemental strand, 32017808 - 32017698
Alignment:
Q  150 aaaaagttttataggatgatgtaaaaacaattttcattgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattct 249  Q
    |||| ||||||||||| |||||||||||||||||||||| |||||| |||||        ||||||| |||||| ||||||||||||| ||||||||| |    
T  32017808 aaaacgttttataggaagatgtaaaaacaattttcattgtctattggttatggaaaaac-gaaagagagagaaagttgaatgtaatttgcatttaatttt 32017710  T
Q  250 atgagaataaac 261  Q
    ||||||||||||    
T  32017709 atgagaataaac 32017698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 87 - 247
Target Start/End: Complemental strand, 4463526 - 4463368
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| ||||||||||||||||| |||||||||||| || ||  || |  |||||||||||| || ||| || || ||| |||||||||||||||||||     
T  4463526 tcacacttattaagaaaactaaagcataagaatttgtagcatggttgt--gtgttttctttggaataagcttcatgggaagatgtaaaaacaattttcac 4463429  T
Q  187 tgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaatt 247  Q
    || |||||| |||||       |||||||| ||||||||| |||||||||| || ||||||    
T  4463428 tggctattggttatggaaaaaatgaaagagagagaaaattaaatgtaatttgcaattaatt 4463368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 87 - 259
Target Start/End: Original strand, 39505225 - 39505397
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataatttt-ttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttca 185  Q
    ||||| ||||||| |||| ||||  ||||||||||| || ||| |||| |||||||||||||| || ||||||||| | | |||||||||||||||||||    
T  39505225 tcacacttattaaaaaaattaaagtataagaatttgtagcatagtttttttgtgttttctttggaataagttttatggtaagatgtaaaaacaattttca 39505324  T
Q  186 ttgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataa 259  Q
    ||| | |||  |||||       | |||||| ||||||||| |||||||||| |||||||||  ||||||||||    
T  39505325 ttggcaattcgttatg-gaaaaataaaagagagagaaaattaaatgtaatttgcatttaatttcatgagaataa 39505397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 131 - 189
Target Start/End: Complemental strand, 8959764 - 8959706
Alignment:
Q  131 ttttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattga 189  Q
    ||||||||||| ||||||||| ||||||||||||| |||||||||||||||||||||||    
T  8959764 ttttttgtgttatctttgaaataagttttataggaagatgtaaaaacaattttcattga 8959706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 101 - 188
Target Start/End: Original strand, 16153353 - 16153439
Alignment:
Q  101 aaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattg 188  Q
    ||||||||||||||| | |||| |  ||| ||||||||||| ||||||||| ||||||||||||| ||||||||||| ||||||||||    
T  16153353 aaaactaaaacataatagtttgtaacatagttttttgtgttatctttgaaataagttttataggaagatgtaaaaac-attttcattg 16153439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 96 - 166
Target Start/End: Complemental strand, 32019980 - 32019910
Alignment:
Q  96 ttaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggat 166  Q
    ||||||||||||||||||||||||||| |||||| |||| ||||||||||||  |||| || |||||||||    
T  32019980 ttaagaaaactaaaacataagaatttggagtatagttttctgtgttttctttagaaaacgtcttataggat 32019910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 87 - 187
Target Start/End: Original strand, 5736233 - 5736333
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||| |||||||||  | |||| |  ||| |||||| |||| ||||||||| || |||||||||| | ||||||||||||||||||    
T  5736233 tcacacttattaagaaaattaaaacatagtagtttgtaacatagttttttatgttatctttgaaataaattttataggaagttgtaaaaacaattttcat 5736332  T
Q  187 t 187  Q
    |    
T  5736333 t 5736333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 87 - 147
Target Start/End: Original strand, 12792779 - 12792839
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttcttt 147  Q
    ||||| ||||||| |||||||||||||||||| ||| |||||| |||||||||||||||||    
T  12792779 tcacacttattaaaaaaactaaaacataagaaattggagtatagttttttgtgttttcttt 12792839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 93 - 188
Target Start/End: Complemental strand, 8506593 - 8506498
Alignment:
Q  93 ttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattg 188  Q
    ||||||||||||||||||||||  | |||| |  ||| ||| || |||| || |||||| ||||||||||| | ||||||||||||||||||||||    
T  8506593 ttattaagaaaactaaaacatagtagtttgcaacatagtttcttatgttatccttgaaataagttttatagaaagatgtaaaaacaattttcattg 8506498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 87 - 261
Target Start/End: Original strand, 9957428 - 9957583
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| ||||||||||||||||||||| |||||||| ||||| | ||||||||||||||||               ||| ||||||||||||||||||||    
T  9957428 tcacacttattaagaaaactaaaacatgagaatttggagtat-agtttttgtgttttcttt---------------ggaagatgtaaaaacaattttcat 9957511  T
Q  187 tgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaac 261  Q
    || |||||| |||||       |||||||  |||||| ||||||||||||| ||||||||| |||||||||||||    
T  9957512 tggctattggttatg-aaaaaatgaaaga--gagaaagttgaatgtaatttgcatttaattttatgagaataaac 9957583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 93 - 200
Target Start/End: Complemental strand, 30703763 - 30703656
Alignment:
Q  93 ttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattgacta 192  Q
    ||||||| ||||||||||||||  | |||  |  ||||||||||||||| ||||||||| || |||||||||| |||||| ||| || ||||||||  ||    
T  30703763 ttattaacaaaactaaaacatagtagtttacaacataattttttgtgttatctttgaaataaattttataggaagatgtataaaaaagtttcattggtta 30703664  T
Q  193 ttgattat 200  Q
    ||||||||    
T  30703663 ttgattat 30703656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 93 - 199
Target Start/End: Complemental strand, 32079666 - 32079560
Alignment:
Q  93 ttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattgacta 192  Q
    ||||||||||||||||||||| | |||||| | |||| |||||| |||| || ||||||  ||||| || | | |||||||||||||||||||| || ||    
T  32079666 ttattaagaaaactaaaacattataatttggattatagttttttatgttctccttgaaattagtttaatggaaagatgtaaaaacaattttcatcgatta 32079567  T
Q  193 ttgatta 199  Q
    || ||||    
T  32079566 tttatta 32079560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 91 - 188
Target Start/End: Original strand, 3463814 - 3463909
Alignment:
Q  91 atttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattg 188  Q
    ||||||||||||||||||||||||  | |||| |  ||| ||||| ||||| ||||||||| ||||||||||||| ||| ||||||||||||| ||||    
T  3463814 atttattaagaaaactaaaacatac-agtttgtaacatagttttt-gtgttatctttgaaataagttttataggaagatataaaaacaatttttattg 3463909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 131 - 188
Target Start/End: Original strand, 5369068 - 5369125
Alignment:
Q  131 ttttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattg 188  Q
    ||||||||||| | ||| ||| ||||||||||||| ||||||||||||||||||||||    
T  5369068 ttttttgtgttatttttaaaataagttttataggaagatgtaaaaacaattttcattg 5369125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 96 - 188
Target Start/End: Original strand, 1144493 - 1144585
Alignment:
Q  96 ttaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattg 188  Q
    |||||||||||||| ||||  | |||| |  ||| ||||||||||| ||||| ||| || ||||||||||  |||||||||||||||||||||    
T  1144493 ttaagaaaactaaaccatagtagtttgtaacatagttttttgtgttatctttaaaataaattttataggaatatgtaaaaacaattttcattg 1144585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 87 - 147
Target Start/End: Original strand, 12729878 - 12729937
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttcttt 147  Q
    ||||| ||||||| |||||||||||||||||| ||| |||||| |||||||||||||||||    
T  12729878 tcacacttattaa-aaaactaaaacataagaaattggagtatagttttttgtgttttcttt 12729937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 12730099 - 12730147
Alignment:
Q  213 agagggagaaaattgaatgtaattttcatttaattctatgagaataaac 261  Q
    |||| |||||||||||||||||||| ||||||||| |||||||||||||    
T  12730099 agagagagaaaattgaatgtaatttgcatttaattttatgagaataaac 12730147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 140 - 187
Target Start/End: Original strand, 104260 - 104307
Alignment:
Q  140 ttttctttgaaaaaagttttataggatgatgtaaaaacaattttcatt 187  Q
    |||| ||||||||||||||||||| | |||||||||||||||||||||    
T  104260 ttttttttgaaaaaagttttatagaaagatgtaaaaacaattttcatt 104307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 151 - 259
Target Start/End: Complemental strand, 7071342 - 7071234
Alignment:
Q  151 aaaagttttataggatgatgtaaaaacaattttcattgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattcta 250  Q
    |||||||| || |||  ||||||||| |||||||||||||||||||||| |       || ||||| | ||||||||||||||||||  ||||||||  |    
T  7071342 aaaagtttcatgggaaaatgtaaaaataattttcattgactattgattacggagaaaatggaagagcgtgaaaattgaatgtaatttgtatttaatttca 7071243  T
Q  251 tgagaataa 259  Q
    |||||||||    
T  7071242 tgagaataa 7071234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 93 - 188
Target Start/End: Complemental strand, 13146889 - 13146794
Alignment:
Q  93 ttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattg 188  Q
    |||||| ||||||||| || ||   |||||| ||||||||||||||||| |||||| || ||||||||| | | |||||||||| |||| ||||||    
T  13146889 ttattatgaaaactaacacttagtgatttgaggtataattttttgtgttctctttggaataagttttatggaaagatgtaaaaataattctcattg 13146794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 93 - 188
Target Start/End: Original strand, 29307186 - 29307281
Alignment:
Q  93 ttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattg 188  Q
    |||||||||||||||||| |||  | |||| |   || ||||||||||  ||||| ||| ||||||||||||| |||||||||| |||||||||||    
T  29307186 ttattaagaaaactaaaatatagtagtttgtaacgtagttttttgtgtaatctttaaaataagttttataggaagatgtaaaaataattttcattg 29307281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 87 - 188
Target Start/End: Original strand, 24432393 - 24432494
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||||||| || ||   |||||| ||||||||||||||||| || ||| || |||||| || | | |||||||||| |||| ||||    
T  24432393 tcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaataagtttcatggaaagatgtaaaaataattctcat 24432492  T
Q  187 tg 188  Q
    ||    
T  24432493 tg 24432494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 87 - 188
Target Start/End: Original strand, 25962441 - 25962542
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||||||| || ||   |||||| ||||||||||||||||| || ||| || |||||| || | | |||||||||| |||| ||||    
T  25962441 tcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaataagtttcatggaaagatgtaaaaataattctcat 25962540  T
Q  187 tg 188  Q
    ||    
T  25962541 tg 25962542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 131 - 188
Target Start/End: Complemental strand, 28907192 - 28907136
Alignment:
Q  131 ttttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattg 188  Q
    ||||||||||| ||||||||| |||||| |||||| ||||||||||||||||| ||||    
T  28907192 ttttttgtgttatctttgaaataagttt-ataggaggatgtaaaaacaatttttattg 28907136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 131 - 188
Target Start/End: Complemental strand, 28943587 - 28943531
Alignment:
Q  131 ttttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattg 188  Q
    ||||||||||| ||||||||| |||||| |||||| ||||||||||||||||| ||||    
T  28943587 ttttttgtgttatctttgaaataagttt-ataggaggatgtaaaaacaatttttattg 28943531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 87 - 188
Target Start/End: Original strand, 31316794 - 31316895
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||||||| || ||   |||||| ||||||||||||||||| || ||| || |||||| || | | |||||||||| |||| ||||    
T  31316794 tcacagttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaataagtttcatggaaagatgtaaaaataattctcat 31316893  T
Q  187 tg 188  Q
    ||    
T  31316894 tg 31316895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 87 - 188
Target Start/End: Original strand, 31690613 - 31690714
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||| ||| || ||   |||||| ||||||||||||||||| |  ||| ||  |||||||||| | |||||||||| |||||||||    
T  31690613 tcacacttattaagaaaattaatacttagtgatttgaggtataattttttgtgttcttcttggaatgagttttatagaaagatgtaaaaataattttcat 31690712  T
Q  187 tg 188  Q
    ||    
T  31690713 tg 31690714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 209 - 261
Target Start/End: Original strand, 5984230 - 5984282
Alignment:
Q  209 tgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaac 261  Q
    |||||||| ||||| ||| |||||||||| ||||||||| |||||||||||||    
T  5984230 tgaaagagagagaatatttaatgtaatttacatttaattttatgagaataaac 5984282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 87 - 187
Target Start/End: Original strand, 8146006 - 8146106
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||||||| ||  |   |||||| ||||||||||||||||| || |||||| |||||| || | | |||||||||| |||| ||||    
T  8146006 tcacacttattaagaaaactaacactcagtgatttgaggtataattttttgtgttctccttgaaataagtttcatggaaagatgtaaaaataattctcat 8146105  T
Q  187 t 187  Q
    |    
T  8146106 t 8146106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 87 - 143
Target Start/End: Original strand, 30893243 - 30893299
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgtttt 143  Q
    ||||| ||||||||||||||||||||| | |||||| |||||| ||| |||||||||    
T  30893243 tcacacttattaagaaaactaaaacatgataatttggagtatagtttcttgtgtttt 30893299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 153 - 188
Target Start/End: Original strand, 10153987 - 10154022
Alignment:
Q  153 aagttttataggatgatgtaaaaacaattttcattg 188  Q
    ||||||||||||| ||||||||||||||||||||||    
T  10153987 aagttttataggaagatgtaaaaacaattttcattg 10154022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 261
Target Start/End: Original strand, 12792929 - 12792968
Alignment:
Q  222 aaattgaatgtaattttcatttaattctatgagaataaac 261  Q
    |||||||||||||||| ||||||||| |||||||||||||    
T  12792929 aaattgaatgtaatttgcatttaattttatgagaataaac 12792968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 87 - 201
Target Start/End: Complemental strand, 24439738 - 24439624
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| ||||||| |||  |||||||| | |||||||  |||||||||||||||| |  ||| || |||||| || | | ||||||||||||||| ||||    
T  24439738 tcacacttattaaaaaagttaaaacattataatttgagatataattttttgtgttattcttggaataagtttcatggaaagatgtaaaaacaattatcat 24439639  T
Q  187 tgactattgattatg 201  Q
    || ||| | ||||||    
T  24439638 tggctaattattatg 24439624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 87 - 188
Target Start/End: Complemental strand, 12639055 - 12638954
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||||||| |  ||   |||||| ||||||||||||||||| || ||| || || |||||| | | |||||||||| |||| ||||    
T  12639055 tcacacttattaagaaaactaacatttagttatttgaggtataattttttgtgttctccttggaataaattttatggaaagatgtaaaaataattctcat 12638956  T
Q  187 tg 188  Q
    ||    
T  12638955 tg 12638954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 87 - 188
Target Start/End: Original strand, 16286076 - 16286177
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||| ||| || ||   |||||| ||||||||||||||||| |||||| || |||||| ||   | |||||||||| |||| ||||    
T  16286076 tcacacttattaagaaaattaacacttagtgatttgaggtataattttttgtgttctctttggaataagtttcatgaaaagatgtaaaaataattctcat 16286175  T
Q  187 tg 188  Q
    ||    
T  16286176 tg 16286177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 218 - 258
Target Start/End: Original strand, 104346 - 104386
Alignment:
Q  218 gagaaaattgaatgtaattttcatttaattctatgagaata 258  Q
    |||||||||||||||||| | ||||||||| ||||||||||    
T  104346 gagaaaattgaatgtaatatgcatttaattttatgagaata 104386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 93 - 201
Target Start/End: Complemental strand, 8144094 - 8143986
Alignment:
Q  93 ttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattgacta 192  Q
    |||||||||||| |||||||||  ||||||| |||||| ||||||| ||||  ||| || |||||| |||| | || ||||||  |||| ||||||  ||    
T  8144094 ttattaagaaaaataaaacatattaatttgaggtataaatttttgtatttttcttggaataagtttcatagaaagaagtaaaacgaattctcattggtta 8143995  T
Q  193 ttgattatg 201  Q
     ||||||||    
T  8143994 atgattatg 8143986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 87 - 143
Target Start/End: Original strand, 36413929 - 36413985
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgtttt 143  Q
    ||||| ||||||||||||| ||||||||  | |||||  ||||||||||||||||||    
T  36413929 tcacacttattaagaaaacaaaaacatagtagtttgagatataattttttgtgtttt 36413985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 115; Significance: 4e-58; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 87 - 327
Target Start/End: Complemental strand, 78125 - 77885
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||||||||||||||||||||  |||||| ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  78125 tcacacttattaagaaaactaaaacataagaatttagagtatagttttttgtgttttctttgaaaaaagttgtataggaagatgtaaaaacaattttcat 78026  T
Q  187 tgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaacnnnnnnnntattgaaaaagataaaa 286  Q
    || | |||| |||||       |||||||  | |||||||||||||||||| ||||||||| |||||||||||||        | |||||||||||||||    
T  78025 tggccattggttatggaaaaaatgaaagaaagtgaaaattgaatgtaatttacatttaattttatgagaataaacaaaaaaaatcttgaaaaagataaaa 77926  T
Q  287 gtttgtcnnnnnnncttatattttgggacaaagaaaatgtg 327  Q
    |||||||       |||||||||||||||||||||||||||    
T  77925 gtttgtcttttttgcttatattttgggacaaagaaaatgtg 77885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 114; Significance: 1e-57; HSPs: 75)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 87 - 326
Target Start/End: Complemental strand, 47868045 - 47867806
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||||||||||||||||||||| |||||| |||||||||||||||||| |||||||||||||||| ||||||||||||||||||||    
T  47868045 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 47867946  T
Q  187 tgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaacnnnnnnnntattgaaaaagataaaa 286  Q
    || |||||| |||||       |||||||  |||||||||||||||||||| ||||||||| |||||||||||          | |||||||||||||||    
T  47867945 tggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataacaaaaaaaaatcttgaaaaagataaaa 47867846  T
Q  287 gtttgtcnnnnnnncttatattttgggacaaagaaaatgt 326  Q
    |||| ||       ||||||||||||||||||||||||||    
T  47867845 gtttttcttttttgcttatattttgggacaaagaaaatgt 47867806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 87 - 260
Target Start/End: Complemental strand, 4058881 - 4058708
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    |||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  4058881 tcacatttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaattttcat 4058782  T
Q  187 tgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaa 260  Q
    ||  ||||| |||||       |||||||| |||||||||||||| ||||| ||||||||| ||||||||||||    
T  4058781 tggttattggttatggaaaaaatgaaagagagagaaaattgaatgaaatttgcatttaattttatgagaataaa 4058708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 87 - 326
Target Start/End: Original strand, 41414597 - 41414834
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| ||||||||||||||||||||||||||| || |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||    
T  41414597 tcacacttattaagaaaactaaaacataagaatatggagtatagttttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaatttttat 41414696  T
Q  187 tgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaacnnnnnnnntattgaaaaagataaaa 286  Q
    || ||||||||||||       |||||||| || ||||||||||||||||| ||||||||| ||| |||||||||        | |||||||||||||||    
T  41414697 tggctattgattatg-aaaaaatgaaagagagaaaaaattgaatgtaatttgcatttaattttataagaataaac-aaaaaaatcttgaaaaagataaaa 41414794  T
Q  287 gtttgtcnnnnnnncttatattttgggacaaagaaaatgt 326  Q
    |||||||       ||||||||||||||||||||||||||    
T  41414795 gtttgtcttttttacttatattttgggacaaagaaaatgt 41414834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 87 - 327
Target Start/End: Complemental strand, 2229413 - 2229173
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||||||||||||||||||||| |||||| |||||||||||||||||| |||||||||||||||| ||||||||||||||||| ||    
T  2229413 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaatttttat 2229314  T
Q  187 tgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaacnnnnnnnntattgaaaaagataaaa 286  Q
    || |||||| |||||       |||||||   ||||||||||||||||||| ||||||||  |||||||||||          ||||| |||||||||||    
T  2229313 tggctattggttatggaaaaaatgaaagaaaaagaaaattgaatgtaatttgcatttaatattatgagaataacaaaaaaaaatattggaaaagataaaa 2229214  T
Q  287 gtttgtcnnnnnnncttatattttgggacaaagaaaatgtg 327  Q
    |||||||       |||||||||||||||||||||||||||    
T  2229213 gtttgtcttttttgcttatattttgggacaaagaaaatgtg 2229173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 87 - 261
Target Start/End: Complemental strand, 20281757 - 20281583
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||||||||||||||||||||| |||||| |||||||||||||||||| |||||||||||||||| ||||||||||||||||||||    
T  20281757 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 20281658  T
Q  187 tgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaac 261  Q
    || |||||| |||||       |||||||   ||||||||||||||||||| ||||||||| |||||||||||||    
T  20281657 tggctattggttatggaaaaaatgaaagaaaaagaaaattgaatgtaatttgcatttaattttatgagaataaac 20281583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 87 - 261
Target Start/End: Complemental strand, 29203672 - 29203498
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||   |||||||||| ||||||||||||||||||||    
T  29203672 tcacacttattaagaaaactaaaacataagaatttggagtataattttttgtgttttctttgcaaatttttttataggaagatgtaaaaacaattttcat 29203573  T
Q  187 tgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaac 261  Q
    || |||||| |||||       |||||||| |||||||||||||||||||| ||||||||| |||||||||||||    
T  29203572 tggctattggttatggaaaaaatgaaagagagagaaaattgaatgtaatttgcatttaattttatgagaataaac 29203498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 87 - 327
Target Start/End: Complemental strand, 26916491 - 26916251
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||||||||||||||||||||| |||||  ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||    
T  26916491 tcacacttattaagaaaactaaaacataagaatttggagtatggttttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaatttttat 26916392  T
Q  187 tgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaacnnnnnnnntattgaaaaagataaaa 286  Q
    || |||||| |||||       |||||||   | ||||||||||||||||| ||||||||| |||||||||||||        | ||||||| |||||||    
T  26916391 tggctattggttatggaaaaaatgaaagaaaaataaaattgaatgtaatttgcatttaattttatgagaataaacaaaaaaaatcttgaaaaggataaaa 26916292  T
Q  287 gtttgtcnnnnnnncttatattttgggacaaagaaaatgtg 327  Q
    |||| ||       ||||||||||| |||||||||||||||    
T  26916291 gtttatcttttttgcttatattttgagacaaagaaaatgtg 26916251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 87 - 261
Target Start/End: Original strand, 17794527 - 17794701
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||||||||| | |||||||||||||||| ||||||| ||||||||||||| || |||||||||| ||||||||||||||||||||    
T  17794527 tcacacttattaagaaaactaaaaaaaaagaatttgaagtatagttttttgcgttttctttgaaataaattttataggaagatgtaaaaacaattttcat 17794626  T
Q  187 tgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaac 261  Q
    || ||||||||||||       || ||||| |||||||||||||||||||| ||||||||| |||||||||||||    
T  17794627 tggctattgattatggaaaaattggaagagagagaaaattgaatgtaatttacatttaattttatgagaataaac 17794701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 87 - 327
Target Start/End: Complemental strand, 14332926 - 14332685
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||||||||||||||||||||| | |||  |||||||||||||||||| |||||||||||||||| ||||||||||||||||| ||    
T  14332926 tcacacttattaagaaaactaaaacataagaatttggaatatggttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaatttttat 14332827  T
Q  187 tgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaac-nnnnnnnntattgaaaaagataaa 285  Q
    || | |||| |||||       |||||||  |||||||||||||||||||| ||||||||| |||||||||||||         | ||| ||||||||||    
T  14332826 tggccattggttatgaaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataaacaaaaaaaaatcttggaaaagataaa 14332727  T
Q  286 agtttgtcnnnnnnncttatattttgggacaaagaaaatgtg 327  Q
    ||||||||       |||||||||||||||||||||||||||    
T  14332726 agtttgtcttttttgcttatattttgggacaaagaaaatgtg 14332685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 87 - 327
Target Start/End: Original strand, 28668987 - 28669226
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||  |||| |||||||||||  |||||||||||||||||||    
T  28668987 tcacacttattaagaaaactaaaacataagaatttaaagtatagttttttgtgttttctttagaaaaggttttataggaaaatgtaaaaacaattttcat 28669086  T
Q  187 tgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaacnnnnnnnntattgaaaaagataaaa 286  Q
    ||  ||||  |||||       |||||||| ||||||||||||||||||||  |||||||| |||||||||||||        | |||||||||||||||    
T  28669087 tggttattagttatg-aaaaaatgaaagagagagaaaattgaatgtaatttgtatttaattttatgagaataaacaaaaaaaatcttgaaaaagataaaa 28669185  T
Q  287 gtttgtcnnnnnnncttatattttgggacaaagaaaatgtg 327  Q
     ||||||       |||||||||||||||||||||||||||    
T  28669186 atttgtcctttttgcttatattttgggacaaagaaaatgtg 28669226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 87 - 261
Target Start/End: Complemental strand, 20716346 - 20716172
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||||||||||||||||||||| |||||| | |||||  |||| |||| |||||||||||||| | ||||||||||||||||||||    
T  20716346 tcacacttattaagaaaactaaaacataagaatttggagtatagtcttttgacttttgtttggaaaaagttttatagaaagatgtaaaaacaattttcat 20716247  T
Q  187 tgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaac 261  Q
    || |||||| |||||       |||||||| |||||||||||||||||||| ||||||||| |||||||||||||    
T  20716246 tggctattggttatggaaaaaatgaaagagtgagaaaattgaatgtaatttgcatttaattttatgagaataaac 20716172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 87 - 238
Target Start/End: Complemental strand, 7654783 - 7654632
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| ||||||||||||||||||||||| |||||| |||||| |||||||||||||||||| |||||||||||||||| ||| ||||||||||||||||    
T  7654783 tcacacttattaagaaaactaaaacataaaaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatataaaaacaattttcat 7654684  T
Q  187 tgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaatttt 238  Q
    || ||||||||||||       |||||||  |||||||||||||||||||||    
T  7654683 tggctattgattatggaaaaaatgaaagaaagagaaaattgaatgtaatttt 7654632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 87 - 261
Target Start/End: Original strand, 5483264 - 5483438
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| || |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| |||||| |||||| ||||||||||||||||||||    
T  5483264 tcacacttgttaagaaaactaaaacataaaaatttgaagtataattttttgtgttttctttaaaataagtttaataggaagatgtaaaaacaattttcat 5483363  T
Q  187 tgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaac 261  Q
    || ||| || |||||       || ||||| |||||||||||||||||| | |||||||||  ||||||||||||    
T  5483364 tggctactggttatggagaaaatggaagagagagaaaattgaatgtaatatgcatttaatttcatgagaataaac 5483438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 87 - 261
Target Start/End: Complemental strand, 39078322 - 39078149
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||||||||||||||||||||| |||||| |||||||||||||||||| ||||||||||||| || ||||||||||||||||||||    
T  39078322 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttata-gaagatgtaaaaacaattttcat 39078224  T
Q  187 tgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaac 261  Q
    || |||||  ||||        ||||||||  ||||||||||||||||| | ||||||||| |||||||||||||    
T  39078223 tggctattagttattgaaaaaatgaaagagaaagaaaattgaatgtaatgtgcatttaattttatgagaataaac 39078149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 93 - 238
Target Start/End: Original strand, 16604838 - 16604983
Alignment:
Q  93 ttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattgacta 192  Q
    |||||||||||||||||||||||||||||  |||||| ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| |||    
T  16604838 ttattaagaaaactaaaacataagaatttagagtatagttttttgtgttttctttgaaaaaagttttataggaagatgttaaaacaattttcattggcta 16604937  T
Q  193 ttgattatgnnnnnnntgaaagagggagaaaattgaatgtaatttt 238  Q
    ||  |||||       |||||||| |||||||||||||||||||||    
T  16604938 ttagttatggaaaaaatgaaagagagagaaaattgaatgtaatttt 16604983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 87 - 261
Target Start/End: Complemental strand, 10069863 - 10069689
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| ||||||| |||||||||||||||||||||| |||||| |||||||| ||||||| |||||||||||||||| | ||||||||||||||||||||    
T  10069863 tcacacttattaataaaactaaaacataagaatttgtagtatagttttttgtattttcttcgaaaaaagttttatagaaagatgtaaaaacaattttcat 10069764  T
Q  187 tgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaac 261  Q
    || |||||| |||||       |||||||    ||||||||||||| |||| ||||||||| |||||||||||||    
T  10069763 tggctattggttatggaaaaagtgaaagaaaaggaaaattgaatgttatttgcatttaattttatgagaataaac 10069689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 87 - 253
Target Start/End: Complemental strand, 24940531 - 24940365
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||||||||||||||||||||||| |||||||||| |||||| |||||||| ||||||||| ||||||||||||| || |||||||||||||||||| |    
T  24940531 tcacatttattaagaaaactaaaacgtaagaatttggagtatagttttttgtattttctttggaaaaagttttataagaagatgtaaaaacaattttcgt 24940432  T
Q  187 tgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatga 253  Q
    ||  ||||| |||||       |||||||| ||||||||| |||||||||| ||||||||| |||||    
T  24940431 tggttattggttatggagaaaatgaaagagagagaaaattaaatgtaatttccatttaattttatga 24940365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 93 - 261
Target Start/End: Original strand, 56318062 - 56318230
Alignment:
Q  93 ttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattgacta 192  Q
    ||||||| |||| ||||||||||||||||  |||||  |||||||||||||||||| |||||| ||||||||| |||||||||||||||||||||  |||    
T  56318062 ttattaaaaaaattaaaacataagaatttagagtatggttttttgtgttttctttggaaaaaggtttataggaagatgtaaaaacaattttcattagcta 56318161  T
Q  193 ttgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaac 261  Q
    ||| |||||       |||||||| |||||||||||||||||||| ||||||||| ||||| |||||||    
T  56318162 ttggttatggaaaaaatgaaagagagagaaaattgaatgtaatttacatttaattttatgataataaac 56318230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 87 - 261
Target Start/End: Complemental strand, 55580836 - 55580661
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    |||||||||||||||||||| ||||||||||||||| |||||| |||||| ||||||||||| |||||||| ||||||| ||||||||||||||||||||    
T  55580836 tcacatttattaagaaaactgaaacataagaatttggagtatagttttttttgttttctttggaaaaagttgtataggaagatgtaaaaacaattttcat 55580737  T
Q  187 tgactattgattat-gnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaac 261  Q
    || |||||  |||| |       |||||||  |||||| || |||||||||| ||||||||| |||||||||||||    
T  55580736 tggctattagttatggaaaaaaatgaaagaaagagaaattttaatgtaatttgcatttaattttatgagaataaac 55580661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 87 - 261
Target Start/End: Original strand, 1585335 - 1585507
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| || ||||||||| |||||||||||| |||| |||||||||||  ||||||||||||||| |||||| || | | ||||| ||||||||||| ||    
T  1585335 tcacacttgttaagaaaagtaaaacataagattttggagtataatttt--gtgttttctttgaaataagtttcatggaaagatgttaaaacaatttttat 1585432  T
Q  187 tgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaac 261  Q
    || ||||||||||||       || ||||| |||||||||||||||||||||||||||||| |||||||||||||    
T  1585433 tggctattgattatggagaaaatggaagagagagaaaattgaatgtaattttcatttaattttatgagaataaac 1585507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 91 - 261
Target Start/End: Original strand, 35310732 - 35310902
Alignment:
Q  91 atttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattgac 190  Q
    |||||||||||||||||||||||||||||||| || ||| |||||||||||||||||  || |||||| || | | |||||||||||||||||||||| |    
T  35310732 atttattaagaaaactaaaacataagaatttgtagcatagttttttgtgttttctttagaataagtttcatggaaagatgtaaaaacaattttcattggc 35310831  T
Q  191 tattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaac 261  Q
    ||||| |||||       || ||||| ||||||||| ||||||||||  ||||||||  ||||||||||||    
T  35310832 tattggttatggaaaaaatggaagagagagaaaattaaatgtaatttgtatttaatttcatgagaataaac 35310902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 87 - 197
Target Start/End: Original strand, 21722668 - 21722778
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| ||||||| ||||||||||||||||||||| ||||||| | |||| ||||||||||| || ||||||||||||| |||||||||| |||||||||    
T  21722668 tcacacttattaataaaactaaaacataagaattttaagtatagtgttttatgttttctttgtaataagttttataggaagatgtaaaaataattttcat 21722767  T
Q  187 tgactattgat 197  Q
    |||||||||||    
T  21722768 tgactattgat 21722778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 93 - 173
Target Start/End: Complemental strand, 16473908 - 16473828
Alignment:
Q  93 ttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaa 173  Q
    |||||||||||||||||| ||||||||||| |||||| ||||||||||||||||||||||||||||||||||| |||||||    
T  16473908 ttattaagaaaactaaaatataagaatttggagtatagttttttgtgttttctttgaaaaaagttttataggaagatgtaa 16473828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 53 - 187
Target Start/End: Original strand, 5064607 - 5064741
Alignment:
Q  53 tactccctccgtcctaaattataagcnnnnnnnntcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaa 152  Q
    |||||||||||||| | |||||||||        ||||| ||||||||||||||||||||||  |||||| |  ||||||||||||||| |||||||||     
T  5064607 tactccctccgtcccatattataagcaaaaaaaatcacacttattaagaaaactaaaacatagtaatttgtaacataattttttgtgttatctttgaaat 5064706  T
Q  153 aagttttataggatgatgtaaaaacaattttcatt 187  Q
    |||||||| |||| |||||||||||||||||||||    
T  5064707 aagttttaaaggaagatgtaaaaacaattttcatt 5064741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 88 - 259
Target Start/End: Complemental strand, 42915695 - 42915523
Alignment:
Q  88 cacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcatt 187  Q
    |||| ||||||| |||||||||| ||||||||||| || ||| |||||||||||||||||| || |||||| || | | |||||||||||||||||||||    
T  42915695 cacacttattaaaaaaactaaaatataagaatttgtagcatagttttttgtgttttctttggaataagtttcatggaaagatgtaaaaacaattttcatt 42915596  T
Q  188 gactattgattat-gnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataa 259  Q
    | | |||| |||| |       | |||||| ||||||||| |||||||||| |||||||||  ||||||||||    
T  42915595 ggcaattggttatggaaaaaaataaaagagagagaaaattaaatgtaatttgcatttaatttcatgagaataa 42915523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 95 - 188
Target Start/End: Complemental strand, 32203371 - 32203278
Alignment:
Q  95 attaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattg 188  Q
    ||||| ||||||||||||||||||||| ||||||| ||||||||  ||||||||||| ||||||||| ||| ||| ||||||||||||||||||    
T  32203371 attaaaaaaactaaaacataagaatttaaagtatagttttttgttgtttctttgaaataagttttatgggaagatataaaaacaattttcattg 32203278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 87 - 259
Target Start/End: Original strand, 48793616 - 48793784
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| ||||||||||||||||| |||||||||||| || ||| ||||  |||||||||||| || |||||| || ||| ||||||||||||||||||||    
T  48793616 tcacacttattaagaaaactaaagcataagaatttgtagcatagtttt--gtgttttctttggaataagtttcatgggaagatgtaaaaacaattttcat 48793713  T
Q  187 tgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataa 259  Q
    || | |||| |||||       | |||||  ||||||||| |||||||||| |||||||||  ||||||||||    
T  48793714 tggcaattggttatgaaaaaaataaaaga--gagaaaattaaatgtaatttgcatttaatttcatgagaataa 48793784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 91 - 247
Target Start/End: Original strand, 32323252 - 32323407
Alignment:
Q  91 atttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattgac 190  Q
    |||| ||||||||| |||||  ||| ||||||||||||  ||||||||||||||||| ||| ||| ||||| ||| ||||||||||||||||||||||||    
T  32323252 atttgttaagaaaattaaaatttaaaaatttgaagtattgttttttgtgttttctttaaaataagatttatgggaagatgtaaaaacaattttcattgac 32323351  T
Q  191 tattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaatt 247  Q
      ||||||||        || ||||| |||||||||||| ||||||| |||||||||    
T  32323352 gcttgattattgagaaaatggaagagagagaaaattgaa-gtaatttacatttaatt 32323407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 124 - 247
Target Start/End: Complemental strand, 5815598 - 5815475
Alignment:
Q  124 agtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattgactattgattatgnnnnnnntgaaagagggagaaa 223  Q
    |||||| ||||||||||||||||||||| |||||||||  || |||||||||| |||||| |||||||||||||||||        | ||||| ||||||    
T  5815598 agtatagttttttgtgttttctttgaaataagttttatgagaagatgtaaaaataatttttattgactattgattatggaaaaaaaggaagagagagaaa 5815499  T
Q  224 attgaatgtaattttcatttaatt 247  Q
    |||||||||||||  |||||||||    
T  5815498 attgaatgtaattgacatttaatt 5815475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 87 - 188
Target Start/End: Original strand, 28142608 - 28142709
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||||||||| || | | |||| |  ||||||||||||||| ||||| ||| ||||||||||||| ||||||||||||||||||||    
T  28142608 tcacacttattaagaaaactaaaatatgatagtttgtaacataattttttgtgttatctttaaaataagttttataggaggatgtaaaaacaattttcat 28142707  T
Q  187 tg 188  Q
    ||    
T  28142708 tg 28142709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 87 - 259
Target Start/End: Original strand, 8683292 - 8683462
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| ||||||| ||||||||| |||||||||||| || ||| |||||||||||||||||| || |||||| || | |  ||||||||| |||||||||    
T  8683292 tcacacttattaaaaaaactaaagcataagaatttgtagcatagttttttgtgttttctttggaataagtttcatggaaatatgtaaaaataattttcat 8683391  T
Q  187 tgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataa 259  Q
    || | |||| |||||       | |||||  ||||||||| ||||||||||  ||||||||  ||||||||||    
T  8683392 tggcaattggttatggaaaaaataaaaga--gagaaaattaaatgtaatttgtatttaatttcatgagaataa 8683462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 87 - 259
Target Start/End: Complemental strand, 14583895 - 14583723
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtg-ttttctttgaaaaaagttttataggatgatgtaaaaacaattttca 185  Q
    |||||||||||||||||||||||| |||||||||| |  |||| || |||||| |||||||| ||| |||||| || ||| ||||||||||| |||||||    
T  14583895 tcacatttattaagaaaactaaaatataagaatttaatatatagttatttgtgtttttctttaaaataagtttcatgggaagatgtaaaaac-attttca 14583797  T
Q  186 ttgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataa 259  Q
    ||| |||| |||||         || ||||| | || ||||||||||||||| |||||||||  ||||||||||    
T  14583796 ttggctatggattaaaaagaaaatggaagagagtgataattgaatgtaatttgcatttaatttcatgagaataa 14583723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 87 - 147
Target Start/End: Original strand, 50080442 - 50080502
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttcttt 147  Q
    ||||| |||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  50080442 tcacacttattaagaaaactaaaacataagaattttgagtataattttttgtgttttcttt 50080502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 87 - 188
Target Start/End: Complemental strand, 32410494 - 32410393
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| ||||||||||||||| ||||||  | |||  | || | ||||||||||| ||||||||| ||||||||||||| |||||||||| |||||||||    
T  32410494 tcacacttattaagaaaactacaacatagtagtttataataaagttttttgtgttatctttgaaataagttttataggaagatgtaaaaataattttcat 32410395  T
Q  187 tg 188  Q
    ||    
T  32410394 tg 32410393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 95 - 188
Target Start/End: Original strand, 46070517 - 46070609
Alignment:
Q  95 attaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattg 188  Q
    ||||||||||||||||||||  | |||| |  || | |||||||||| ||||||||| ||||||||||||| ||||||||||||||||||||||    
T  46070517 attaagaaaactaaaacatagtagtttgtaacat-agtttttgtgttgtctttgaaataagttttataggaagatgtaaaaacaattttcattg 46070609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 127 - 188
Target Start/End: Complemental strand, 49080383 - 49080322
Alignment:
Q  127 ataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattg 188  Q
    |||||||||||| || ||||||||| ||||||||||||| ||||||||||||||||||||||    
T  49080383 ataattttttgtcttatctttgaaataagttttataggaagatgtaaaaacaattttcattg 49080322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 87 - 143
Target Start/End: Original strand, 12002619 - 12002675
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgtttt 143  Q
    ||||| |||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  12002619 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgtttt 12002675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 100 - 188
Target Start/End: Original strand, 47516190 - 47516278
Alignment:
Q  100 gaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattg 188  Q
    ||||| |||||||||  | |||| | |||| ||||||||||| ||||||||| ||||||||||||| || |||||||||||||||||||    
T  47516190 gaaaagtaaaacatagtagtttgtaatatagttttttgtgttatctttgaaataagttttataggaagaagtaaaaacaattttcattg 47516278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 107 - 201
Target Start/End: Original strand, 32280009 - 32280103
Alignment:
Q  107 aaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttat-aggatgatgtaaaaacaattttcattgactattgattatg 201  Q
    |||||||||||||||| ||||||||||||||||||||||||  || | |||| || | ||| |||||||||||||||| |||| ||||||||||||    
T  32280009 aaaacataagaatttggagtataattttttgtgttttctttagaataggtttgatgaagat-atgtaaaaacaattttaattggctattgattatg 32280103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 131 - 189
Target Start/End: Complemental strand, 29511547 - 29511489
Alignment:
Q  131 ttttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattga 189  Q
    ||||||||||| ||||| ||| ||||||||||||| |||||||||||||||||||||||    
T  29511547 ttttttgtgttatctttaaaataagttttataggaagatgtaaaaacaattttcattga 29511489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 87 - 188
Target Start/End: Original strand, 8013075 - 8013176
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||||||||||||||||||||||||||  | |||| |  ||| ||| ||||||| || |||||| |||||| |||| | ||||||||||||||||| ||    
T  8013075 tcacatttattaagaaaactaaaacatagtagtttgtaacatagtttcttgtgttatccttgaaataagtttcatagaaagatgtaaaaacaatttttat 8013174  T
Q  187 tg 188  Q
    ||    
T  8013175 tg 8013176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 91 - 188
Target Start/End: Original strand, 17799124 - 17799221
Alignment:
Q  91 atttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattg 188  Q
    |||||||||||||||||||| || | |||||| |||||||||| | ||||| |  ||| ||  |||||||| ||| ||||||||||||||||||||||    
T  17799124 atttattaagaaaactaaaatatgataatttggagtataatttctggtgttcttcttggaattagttttatgggaagatgtaaaaacaattttcattg 17799221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 87 - 188
Target Start/End: Complemental strand, 29899876 - 29899775
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    |||||||||||||||||||||| || ||   |||||| ||||||||||||||||| || ||| || ||||||||| | | |||||||||| |||| ||||    
T  29899876 tcacatttattaagaaaactaacacgtagtgatttgaggtataattttttgtgttctccttggaataagttttatggaaagatgtaaaaataattctcat 29899777  T
Q  187 tg 188  Q
    ||    
T  29899776 tg 29899775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 93 - 261
Target Start/End: Original strand, 52535589 - 52535745
Alignment:
Q  93 ttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattgacta 192  Q
    ||||||||||||||||| |||||||||||| ||||||         |||||||||  ||||| |||||||   | | ||||||| ||||||||||| |||    
T  52535589 ttattaagaaaactaaagcataagaatttggagtata---------gttttctttagaaaaatttttata---taaagtaaaaataattttcattggcta 52535676  T
Q  193 ttgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaac 261  Q
    ||| ||||        |||||||| ||||||||||||| |||||| ||||||||| |||||||||||||    
T  52535677 ttggttatagaaaaagtgaaagagagagaaaattgaatataatttgcatttaattttatgagaataaac 52535745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 87 - 247
Target Start/End: Complemental strand, 19352018 - 19351852
Alignment:
Q  87 tcacatttattaagaaaactaaaacat-aagaatttgaagtataattttt---tgtgttttctttgaaaaaagttttataggatgatg-taaaaacaatt 181  Q
    ||||| ||||||||||||||||||||| || || ||| |||||| |||||   ||||||||| |||||| |||||| || ||| |||| |||||||||||    
T  19352018 tcacacttattaagaaaactaaaacataaaaaaattggagtatagtttttttgtgtgttttcattgaaataagtttcatgggaagatgttaaaaacaatt 19351919  T
Q  182 ttcattgactattgattatgnnnnnnntgaaagagggag-aaaattgaatgtaattttcatttaatt 247  Q
    ||||||| |||||  |||||       || || || ||| ||||||||||||||||| |||||||||    
T  19351918 ttcattggctattagttatgaaaacaatggaatagagagaaaaattgaatgtaatttgcatttaatt 19351852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 124 - 247
Target Start/End: Complemental strand, 50145864 - 50145742
Alignment:
Q  124 agtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattgactattgattatgnnnnnnntgaaagagggagaaa 223  Q
    ||||||||| ||||||||| ||||| || ||||||||| ||| |||||||| ||||||||||||| |||||||| |||       || ||||| | ||||    
T  50145864 agtataattgtttgtgttt-ctttggaataagttttatgggaagatgtaaacacaattttcattggctattgataatggagaaaatggaagagagggaaa 50145766  T
Q  224 attgaatgtaattttcatttaatt 247  Q
    ||| |||||||||  |||||||||    
T  50145765 attaaatgtaattaacatttaatt 50145742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 94 - 163
Target Start/End: Original strand, 17236262 - 17236331
Alignment:
Q  94 tattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttatag 163  Q
    |||||||||||||||||||||| | ||||| ||||||||||||||||| |  |||||| |||||| ||||    
T  17236262 tattaagaaaactaaaacataatagtttgaggtataattttttgtgttcttcttgaaataagtttcatag 17236331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 87 - 188
Target Start/End: Original strand, 29180371 - 29180472
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||||||| || ||   |||||| ||||||||||||||||| || ||| || |||||| |||| | |||||||||| |||| ||||    
T  29180371 tcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaataagtttcatagaaagatgtaaaaataattctcat 29180470  T
Q  187 tg 188  Q
    ||    
T  29180471 tg 29180472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 167 - 261
Target Start/End: Complemental strand, 35529758 - 35529664
Alignment:
Q  167 gatgtaaaaacaattttcattgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaac 261  Q
    ||||||||||||||||||||||  ||||| |||||       |||||||| || ||||||||| ||||||| ||||||||| |||||| ||||||    
T  35529758 gatgtaaaaacaattttcattgggtattggttatggaaaaaatgaaagagagataaaattgaaagtaatttgcatttaattttatgagcataaac 35529664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 87 - 188
Target Start/End: Original strand, 28318408 - 28318504
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| ||||||| ||||||||||||||    |||| |  ||| ||||||||||| ||||||||| ||  ||||||||| ||||||||||||||||||||    
T  28318408 tcacacttattaacaaaactaaaacatag---tttgtaacatagttttttgtgttatctttgaaataa--tttataggaagatgtaaaaacaattttcat 28318502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 167 - 259
Target Start/End: Original strand, 25297288 - 25297380
Alignment:
Q  167 gatgtaaaaacaattttcattgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataa 259  Q
    |||||||||||||||||||||| ||||||||||||       |  |||||   |||||||||||||||||| |||||||||  ||||||||||    
T  25297288 gatgtaaaaacaattttcattggctattgattatggagaaaatagaagagatggaaaattgaatgtaatttacatttaatttcatgagaataa 25297380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 87 - 181
Target Start/End: Original strand, 5222252 - 5222346
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaatt 181  Q
    ||||| |||||||||||||||| |||||  |||||||  |||||||||||||||| |  |||||| |||||| |||  |  ||||||||||||||    
T  5222252 tcacacttattaagaaaactaatacatagtaatttgagttataattttttgtgttcttcttgaaataagtttcataaaaaaatgtaaaaacaatt 5222346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 91 - 141
Target Start/End: Complemental strand, 7438810 - 7438760
Alignment:
Q  91 atttattaagaaaactaaaacataagaatttgaagtataattttttgtgtt 141  Q
    ||||||||||||||||||||||||| |||||| |||||| ||||| |||||    
T  7438810 atttattaagaaaactaaaacataataatttggagtatagtttttggtgtt 7438760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 87 - 189
Target Start/End: Original strand, 9798034 - 9798136
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    |||||||||||||||||||||| |  ||   |||||| ||||||||||||| ||| || |||||| |||||| || | | |||||||||| |||| ||||    
T  9798034 tcacatttattaagaaaactaacatttagtgatttgaggtataattttttgcgttctccttgaaataagtttcatggaaagatgtaaaaataattctcat 9798133  T
Q  187 tga 189  Q
    |||    
T  9798134 tga 9798136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 87 - 189
Target Start/End: Complemental strand, 38941030 - 38940928
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||||||| || |||  |||||| ||||||||||||||||| || ||| || |||||| ||   | |||||||||| |||| ||||    
T  38941030 tcacacttattaagaaaactaacacttaatgatttgaggtataattttttgtgttctccttggaataagtttcattaaaagatgtaaaaataattctcat 38940931  T
Q  187 tga 189  Q
    |||    
T  38940930 tga 38940928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 87 - 188
Target Start/End: Original strand, 30011913 - 30012014
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||  ||||| ||   ||||||| ||||||||||||||||| | |||| || |||||| || | | ||||||||||||||| ||||    
T  30011913 tcacacttattaagaaagttaaaatattgtaatttgaggtataattttttgtgttatttttggaataagtttcatggaaagatgtaaaaacaattatcat 30012012  T
Q  187 tg 188  Q
    ||    
T  30012013 tg 30012014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 87 - 188
Target Start/End: Original strand, 30776443 - 30776544
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||||||| || ||   |||||| ||||||||||||||||| || ||| || |||||| || | | |||||||||| |||| ||||    
T  30776443 tcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaataagtttcatggaaagatgtaaaaataattctcat 30776542  T
Q  187 tg 188  Q
    ||    
T  30776543 tg 30776544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 87 - 188
Target Start/End: Complemental strand, 30777648 - 30777547
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||||||| |  ||   |||||| ||||||||||||||||| || |||||| |||||| || | | |||||||||| |||| ||||    
T  30777648 tcacacttattaagaaaactaacaattagtgatttgaggtataattttttgtgttctccttgaaataagtttcatggaaagatgtaaaaataattctcat 30777549  T
Q  187 tg 188  Q
    ||    
T  30777548 tg 30777547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 87 - 188
Target Start/End: Original strand, 32012286 - 32012387
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||||||| || |||  |||||| ||||||||||||||||| || || ||  |||||| || | | |||||||||| |||| ||||    
T  32012286 tcacacttattaagaaaactaacacttaatgatttgaggtataattttttgtgttctccttaaattaagtttcatggaaagatgtaaaaataattctcat 32012385  T
Q  187 tg 188  Q
    ||    
T  32012386 tg 32012387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 87 - 188
Target Start/End: Complemental strand, 37788612 - 37788511
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||||||| || ||   |||||| ||||||||||||||||| || ||| || |||||| || | | |||||||||| |||| ||||    
T  37788612 tcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaataagtttcatggaaagatgtaaaaataattctcat 37788513  T
Q  187 tg 188  Q
    ||    
T  37788512 tg 37788511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 131 - 188
Target Start/End: Complemental strand, 37912006 - 37911949
Alignment:
Q  131 ttttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattg 188  Q
    ||||||||||| ||||| ||| ||||||||||| |  |||||||||||||||||||||    
T  37912006 ttttttgtgttatctttaaaataagttttatagaaatatgtaaaaacaattttcattg 37911949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 87 - 188
Target Start/End: Original strand, 39969948 - 39970049
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||||||| || ||   |||||| ||||||||||||||||| || ||| || |||||| || | | |||||||||| |||| ||||    
T  39969948 tcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaataagtttcatggaaagatgtaaaaataattctcat 39970047  T
Q  187 tg 188  Q
    ||    
T  39970048 tg 39970049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 87 - 188
Target Start/End: Complemental strand, 50768606 - 50768505
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||||||| || ||   ||| ||  ||||||||||||||||||| ||| || |||||| || | | |||||||||| |||||||||    
T  50768606 tcacacttattaagaaaactaatacttagtgattcgagatataattttttgtgttttccttggaataagtttcatggaaagatgtaaaaataattttcat 50768507  T
Q  187 tg 188  Q
    ||    
T  50768506 tg 50768505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 87 - 188
Target Start/End: Original strand, 53677438 - 53677539
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||||||| || ||   |||||| ||||||||||||||||| || ||| ||  ||||| |||| | |||||||||| |||| ||||    
T  53677438 tcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaatgagtttcatagaaagatgtaaaaataattctcat 53677537  T
Q  187 tg 188  Q
    ||    
T  53677538 tg 53677539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 87 - 188
Target Start/End: Complemental strand, 53848626 - 53848525
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| ||||||||||||| ||||||||  | |||| |  ||| ||| ||||||| || |||||| || |||||||||| || |||||||||||||| ||    
T  53848626 tcacacttattaagaaaacaaaaacatagtagtttgcaacatagtttcttgtgttatccttgaaataatttttataggaagacgtaaaaacaattttaat 53848527  T
Q  187 tg 188  Q
    ||    
T  53848526 tg 53848525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 88 - 188
Target Start/End: Original strand, 5841766 - 5841866
Alignment:
Q  88 cacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcatt 187  Q
    |||||||||| | ||||||||| ||||  | |||| |  ||| ||| ||||||| || |||||| || |||||||||| |||||||||| ||||||||||    
T  5841766 cacatttatttataaaactaaagcatagtagtttgcaacatagtttcttgtgttatccttgaaataaattttataggaagatgtaaaaataattttcatt 5841865  T
Q  188 g 188  Q
    |    
T  5841866 g 5841866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 91 - 143
Target Start/End: Complemental strand, 52713212 - 52713160
Alignment:
Q  91 atttattaagaaaactaaaacataagaatttgaagtataattttttgtgtttt 143  Q
    |||||||||||||||||| || ||   ||||||||||||||||||||||||||    
T  52713212 atttattaagaaaactaatacttagtgatttgaagtataattttttgtgtttt 52713160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 113 - 195
Target Start/End: Complemental strand, 31280329 - 31280253
Alignment:
Q  113 taagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattgactattg 195  Q
    |||||||||  |||||| |||||||||||||||||| || |||||||||      ||||||||| ||||||||||| ||||||    
T  31280329 taagaatttagagtatagttttttgtgttttctttggaataagttttat------atgtaaaaataattttcattggctattg 31280253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 136 - 182
Target Start/End: Original strand, 8178274 - 8178320
Alignment:
Q  136 tgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattt 182  Q
    |||||| ||||||||| |||||||||| || ||||||||||||||||    
T  8178274 tgtgttatctttgaaataagttttataagaagatgtaaaaacaattt 8178320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 87 - 188
Target Start/End: Original strand, 3043126 - 3043227
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||||||| || ||   | |||| ||||||||||||||||  || |||||| |||||| || | | |||||||||| |||| ||||    
T  3043126 tcacacttattaagaaaactaacacttagtgagttgaggtataattttttgtgtactccttgaaataagtttcatggaaagatgtaaaaataattctcat 3043225  T
Q  187 tg 188  Q
    ||    
T  3043226 tg 3043227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 87 - 188
Target Start/End: Original strand, 10591462 - 10591563
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||||||| |  ||   |||||| ||||||||||||||||| || ||| || |||||| || | | |||||||||| |||| ||||    
T  10591462 tcacacttattaagaaaactaacatttagtgatttgaggtataattttttgtgttctccttggaataagtttcatggaaagatgtaaaaataattctcat 10591561  T
Q  187 tg 188  Q
    ||    
T  10591562 tg 10591563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 155 - 188
Target Start/End: Original strand, 23978169 - 23978202
Alignment:
Q  155 gttttataggatgatgtaaaaacaattttcattg 188  Q
    ||||||||||| ||||||||||||||||||||||    
T  23978169 gttttataggaagatgtaaaaacaattttcattg 23978202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 87 - 135
Target Start/End: Original strand, 4443086 - 4443133
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttt 135  Q
    |||||||||||||||||| |||| |||||||||||| ||||| ||||||    
T  4443086 tcacatttattaagaaaattaaa-cataagaatttgcagtattattttt 4443133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 92 - 144
Target Start/End: Original strand, 31532444 - 31532496
Alignment:
Q  92 tttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttc 144  Q
    |||||||||||||||||||||| | |||||  |||||| |||||| |||||||    
T  31532444 tttattaagaaaactaaaacattacaatttagagtatagttttttatgttttc 31532496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 87 - 147
Target Start/End: Complemental strand, 51495310 - 51495250
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttcttt 147  Q
    ||||| |||||||||||| ||| || |||  |||||| ||||||||||||||||| |||||    
T  51495310 tcacagttattaagaaaattaacacttaatgatttgaggtataattttttgtgttctcttt 51495250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 114; Significance: 1e-57; HSPs: 82)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 87 - 261
Target Start/End: Complemental strand, 47864363 - 47864189
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||||||||||||||||||||||||| |||||||| |||||| |||||||  |||||||||||||||||||||||||| ||||||||||||||||||||    
T  47864363 tcacatttattaagaaaactaaaacatgagaatttggagtatagttttttgcattttctttgaaaaaagttttataggaagatgtaaaaacaattttcat 47864264  T
Q  187 tgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaac 261  Q
    |||||||||||||||       |||||||| || ||||||||||||||||| ||||||||| |||||||||||||    
T  47864263 tgactattgattatgaaaaaaatgaaagagagaaaaaattgaatgtaatttgcatttaattttatgagaataaac 47864189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 87 - 259
Target Start/End: Original strand, 50650989 - 50651161
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||||||||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||| ||||||||||||||||||||    
T  50650989 tcacacttattaagaaaactaaaacataagaatttgaaatatagttttttgtgttttctttgcaaaaagttttataggaagatgtaaaaacaattttcat 50651088  T
Q  187 tgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataa 259  Q
    ||||||||| |||||       | |||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  50651089 tgactattggttatggagaaaataaaagagagagaaaattgaatgtaatttgcatttaattttatgagaataa 50651161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 87 - 260
Target Start/End: Original strand, 14752160 - 14752333
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| ||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| |||||  ||||||||| ||||||||||||||||||||    
T  14752160 tcacacttatttagaaaactaaaacataagaatttggagtataattttttgtgttttctttggaaaaaaatttataggaagatgtaaaaacaattttcat 14752259  T
Q  187 tgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaa 260  Q
    ||||||||| |||||       |||||||| |||||||||||||||||||| ||||||||| ||||||||||||    
T  14752260 tgactattggttatggaaaaaatgaaagagagagaaaattgaatgtaatttgcatttaattttatgagaataaa 14752333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 87 - 259
Target Start/End: Original strand, 37042369 - 37042541
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| ||||||||||||||||||||||| |||||| |||||| |||||||||||||| ||| |||||||||||||||| ||||||||||||||||||||    
T  37042369 tcacacttattaagaaaactaaaacataaaaatttggagtatagttttttgtgttttcgttggaaaaagttttataggaagatgtaaaaacaattttcat 37042468  T
Q  187 tgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataa 259  Q
    || ||||||||||||       |||||||  |||||||||||||||||||| ||||||||| |||||||||||    
T  37042469 tggctattgattatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 37042541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 87 - 261
Target Start/End: Original strand, 7866435 - 7866609
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||||||||||||||||||||  |||||| |||||| | ||||||||||||||||||||||| || ||||||||||||||||||||    
T  7866435 tcacacttattaagaaaactaaaacataagaatttagagtatagttttttttattttctttgaaaaaagttttataagaagatgtaaaaacaattttcat 7866534  T
Q  187 tgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaac 261  Q
    ||||||||| |||||       | ||||||  ||||||||||||||||||||||||||||| |||||||||||||    
T  7866535 tgactattggttatggaaaaaataaaagagatagaaaattgaatgtaattttcatttaattttatgagaataaac 7866609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 87 - 261
Target Start/End: Original strand, 54464848 - 54465021
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||   |||||||| |||||||||||||||||| |    
T  54464848 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttcttt-aaaaaaaaattataggaagatgtaaaaacaattttcgt 54464946  T
Q  187 tgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaac 261  Q
    || |||||| |||||       |||||||| |||||||||||||||||||| | ||||||| |||||||||||||    
T  54464947 tggctattggttatggaaaaagtgaaagagagagaaaattgaatgtaatttgcgtttaattttatgagaataaac 54465021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 93 - 327
Target Start/End: Original strand, 23311551 - 23311785
Alignment:
Q  93 ttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattgacta 192  Q
    ||||||||||||||||||||||| |||||  |||||| |||| |||||||||||||||||||||||||||||| |||||||||||||||||||||| |||    
T  23311551 ttattaagaaaactaaaacataaaaatttagagtatagttttgtgtgttttctttgaaaaaagttttataggaagatgtaaaaacaattttcattggcta 23311650  T
Q  193 ttgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaacnnnnnnnntattgaaaaagataaaagtttgt 292  Q
    ||| |||||       |||||||  |||||||||||||||||| | ||||||||| |||||||||||          | ||||||||||||||||||||     
T  23311651 ttggttatggaaaaaatgaaagaaagagaaaattgaatgtaatatacatttaattttatgagaataacaaaaaaaaatcttgaaaaagataaaagtttga 23311750  T
Q  293 cnnnnnnncttatattttgggacaaagaaaatgtg 327  Q
    |       |||||||||||||||||||||||||||    
T  23311751 cttttttgcttatattttgggacaaagaaaatgtg 23311785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 93 - 360
Target Start/End: Original strand, 11054269 - 11054533
Alignment:
Q  93 ttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttcttt-gaaaaaagttttataggatgatgtaaaaacaattttcattgact 191  Q
    |||||||||||||||||| ||||||||||| |||||| ||||||||||||||||| |||||||||||||||||| ||| |||||||||||||||||| ||    
T  11054269 ttattaagaaaactaaaatataagaatttggagtatagttttttgtgttttctttggaaaaaagttttataggaagatttaaaaacaattttcattggct 11054368  T
Q  192 attgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaacnnnnnnnntattgaaaaagataaaagtttg 291  Q
    |||| |||||       |||||    |||||||||||||||||||| ||||||||| |||||||||||          | ||| ||||||||||||||||    
T  11054369 attggttatggaaaaaatgaaa----gagaaaattgaatgtaatttgcatttaattttatgagaataacaaaaaaaaatcttggaaaagataaaagtttg 11054464  T
Q  292 tcnnnnnnncttatattttgggacaaagaaaatgtgnnnnnnnacttatattatgagacggagggagta 360  Q
    ||       |||||||||||||||||||||||||||        ||||||||||| |||||||||||||    
T  11054465 tcttttttgcttatattttgggacaaagaaaatgtgttttttggcttatattatgggacggagggagta 11054533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 87 - 261
Target Start/End: Original strand, 46711610 - 46711783
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| ||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||    
T  46711610 tcacacttattaagaaaacgaaaacataagaatttggagtataattttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaatattcat 46711709  T
Q  187 tgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaac 261  Q
    || |||||| |||||       |||||||| |||||| |||||||||||||  |||||||| ||||| |||||||    
T  46711710 tggctattggttatg-aaaaaatgaaagagagagaaatttgaatgtaatttgtatttaattttatgaaaataaac 46711783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 87 - 327
Target Start/End: Complemental strand, 36546714 - 36546474
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| ||||||||||||||||||||||| |||||  |||||| |||||||| ||||||||| ||||||||| |||||| ||||||||| ||||||||||    
T  36546714 tcacacttattaagaaaactaaaacataaaaatttagagtatagttttttgtattttctttggaaaaagtttcataggaagatgtaaaaccaattttcat 36546615  T
Q  187 tgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaacnnnnnnnntattgaaaaagataaaa 286  Q
    || |||||| ||||        |||||||| |||| |||| |||||||||| ||||||||| |||||||||||||        | |||||||||| ||||    
T  36546614 tggctattggttatagaaaaaatgaaagagagagagaatttaatgtaatttgcatttaattttatgagaataaacaaaaagaatcttgaaaaagacaaaa 36546515  T
Q  287 gtttgtcnnnnnnncttatattttgggacaaagaaaatgtg 327  Q
    |||||||       |||||||||||||||||||||||||||    
T  36546514 gtttgtcttttttgcttatattttgggacaaagaaaatgtg 36546474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 87 - 327
Target Start/End: Original strand, 36561601 - 36561841
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| ||||||||||||||||||||||| |||||  |||||| |||||||| ||||||||| ||||||||| |||||| ||||||||| ||||||||||    
T  36561601 tcacacttattaagaaaactaaaacataaaaatttagagtatagttttttgtattttctttggaaaaagtttcataggaagatgtaaaaccaattttcat 36561700  T
Q  187 tgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaacnnnnnnnntattgaaaaagataaaa 286  Q
    || |||||| ||||        |||||||| |||| |||| |||||||||| ||||||||| |||||||||||||        | |||||||||| ||||    
T  36561701 tggctattggttatagaaaaaatgaaagagagagagaatttaatgtaatttgcatttaattttatgagaataaacaaaaagaatcttgaaaaagacaaaa 36561800  T
Q  287 gtttgtcnnnnnnncttatattttgggacaaagaaaatgtg 327  Q
    |||||||       |||||||||||||||||||||||||||    
T  36561801 gtttgtcttttttgcttatattttgggacaaagaaaatgtg 36561841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 93 - 261
Target Start/End: Complemental strand, 37075126 - 37074956
Alignment:
Q  93 ttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattgacta 192  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||| ||||||||||||| |||    
T  37075126 ttattaaaaaaactaaaacataagaatttgaagtataattttttgtgttttctttggaaaaagttttataggaagatgtaaacacaattttcattggcta 37075027  T
Q  193 ttgattatgnnnnnnntg--aaagagggagaaaattgaatgtaattttcatttaattctatgagaataaac 261  Q
    ||| ||||        ||  |||||| || ||||||||||||||||| ||||||||| |||||||||||||    
T  37075026 ttggttatagaaaaaatgaaaaagagcgataaaattgaatgtaatttgcatttaattttatgagaataaac 37074956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 87 - 261
Target Start/End: Complemental strand, 6075253 - 6075079
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||||||||  ||||||||||| ||||||||||||||||||||||||| ||||||| ||| |||| || |||||||||||||||||    
T  6075253 tcacacttattaagaaaactaaagtataagaatttggagtataattttttgtgttttctttggaaaaagtgttacaggaagaagtaaaaacaattttcat 6075154  T
Q  187 tgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaac 261  Q
    || | |||| |||||       |||||||| |||||||||||||||||||| ||||||||| |||||||||||||    
T  6075153 tggccattggttatgcaaaaaatgaaagagagagaaaattgaatgtaatttgcatttaattttatgagaataaac 6075079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 87 - 261
Target Start/End: Complemental strand, 28875578 - 28875404
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||||||||||||||||||||| |||||||||||| | |||| || ||||||||||||||| ||||||||||||| || ||||||||||||||||||||    
T  28875578 tcacatttattaagaaaactaaagcataagaatttggactatagttatttgtgttttctttggaaaaagttttataagaagatgtaaaaacaattttcat 28875479  T
Q  187 tgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaac 261  Q
    || |||||| |||||       |||||||   |||||||||||||||||||  |||||||| |||||||||||||    
T  28875478 tggctattggttatggagaaaatgaaagaaaaagaaaattgaatgtaatttgtatttaattttatgagaataaac 28875404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 87 - 261
Target Start/End: Complemental strand, 35963324 - 35963150
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||||||||||||||||||||| |||||| ||||||||||||| |||| |||||||||||||||| |||| |||||||||||| ||    
T  35963324 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttgtttggaaaaagttttataggaagatggaaaaacaatttttat 35963225  T
Q  187 tgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaac 261  Q
    ||  ||||| |||||       |||||||| ||||||||| |||| ||||| ||||||||| |||||||||||||    
T  35963224 tggttattggttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaattttatgagaataaac 35963150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 87 - 259
Target Start/End: Complemental strand, 30189743 - 30189570
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| ||||||| |||| ||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  30189743 tcacacttattaaaaaaattaaaacataagaatttggagtatagttttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaattttcat 30189644  T
Q  187 tgactattgattat-gnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataa 259  Q
    || |||||| |||| |       |||||||  ||||| |||||||||||||| ||||||||| || ||||||||    
T  30189643 tggctattggttatggaaaaaaatgaaagaaagagaatattgaatgtaatttacatttaattttacgagaataa 30189570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 87 - 261
Target Start/End: Original strand, 579097 - 579264
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| ||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  579097 tcacacttattaagaaaactaaaacataagaatttgg-------ttttttgtgttttctttgaaaaaagttttataggaagatataaaaacaattttcat 579189  T
Q  187 tgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaac 261  Q
    || |||||| |||||       |||||||| |||||||||||||||||||| ||||||||| ||||||| |||||    
T  579190 tggctattggttatggaaaaaatgaaagagagagaaaattgaatgtaatttgcatttaattttatgagattaaac 579264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 113 - 261
Target Start/End: Complemental strand, 6438229 - 6438081
Alignment:
Q  113 taagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattgactattgattatgnnnnnnntgaa 212  Q
    |||||||||| |||||| ||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| |||||| |||||       ||||    
T  6438229 taagaatttggagtatagttttttgtgttttctttgaaaaaagctttataggaagatgtaaaaacaattttcattggctattggttatggagaaaatgaa 6438130  T
Q  213 agagggagaaaattgaatgtaattttcatttaattctatgagaataaac 261  Q
    |||| || |||||| |||||||||| ||||||||| |||||||||||||    
T  6438129 agagagataaaattaaatgtaatttgcatttaattttatgagaataaac 6438081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 87 - 261
Target Start/End: Complemental strand, 50730281 - 50730107
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtata-attttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttca 185  Q
    |||||||||||||||||||||||||||||||||||| ||||||  ||||||||| |||||||| |||||||||||||||| |||||||||| ||   |||    
T  50730281 tcacatttattaagaaaactaaaacataagaatttggagtatagtttttttgtgctttctttggaaaaagttttataggaagatgtaaaaa-aaaaatca 50730183  T
Q  186 ttgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaac 261  Q
    |||||||||| |||||       | ||| || |||||||||||||||||||| ||||||||| || ||||||||||    
T  50730182 ttgactattggttatggaaaaaataaaaaagagagaaaattgaatgtaatttacatttaattttaagagaataaac 50730107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 87 - 261
Target Start/End: Original strand, 50782573 - 50782747
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtata-attttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttca 185  Q
    |||||||||||||||||||||||||||||||||||| ||||||  ||||||||| |||||||| |||||||||||||||| |||||||||| ||   |||    
T  50782573 tcacatttattaagaaaactaaaacataagaatttggagtatagtttttttgtgctttctttggaaaaagttttataggaagatgtaaaaa-aaaaatca 50782671  T
Q  186 ttgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaac 261  Q
    |||||||||| |||||       | ||| || |||||||||||||||||||| ||||||||| || ||||||||||    
T  50782672 ttgactattggttatggaaaaaataaaaaagagagaaaattgaatgtaatttacatttaattttaagagaataaac 50782747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 54 - 194
Target Start/End: Complemental strand, 9264756 - 9264616
Alignment:
Q  54 actccctccgtcctaaattataagcnnnnnnnntcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaa 153  Q
    ||||||||||||| ||||||||||         ||||| |||||||||||||||||||||| ||||||  |||||| |||||||||||||||||||||||    
T  9264756 actccctccgtcccaaattataagaaaaaaaaatcacacttattaagaaaactaaaacatatgaattttgagtatagttttttgtgttttctttgaaaaa 9264657  T
Q  154 agttttataggatgatgtaaaaacaattttcattgactatt 194  Q
    ||||||||| || |||||||||||||||||||||| |||||    
T  9264656 agttttatatgaagatgtaaaaacaattttcattggctatt 9264616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 88 - 261
Target Start/End: Complemental strand, 19464248 - 19464073
Alignment:
Q  88 cacatttattaagaaaactaaaacataagaatttgaagtataa--ttttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttca 185  Q
    |||| ||||||| |||||||||||||||||||||| ||||||   ||||||||||||||||||||||||||||||||||| |||  ||||||||||||||    
T  19464248 cacacttattaacaaaactaaaacataagaatttggagtatatagttttttgtgttttctttgaaaaaagttttataggaagattgaaaaacaattttca 19464149  T
Q  186 ttgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaac 261  Q
    || | ||||| |||||       |||||||| || ||| ||||||||||||| ||||| | | |||||||||||||    
T  19464148 tttattattggttatgggaaaaatgaaagagagaaaaagttgaatgtaatttgcatttcagtttatgagaataaac 19464073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 93 - 260
Target Start/End: Original strand, 26724949 - 26725116
Alignment:
Q  93 ttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattgacta 192  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || ||||||| |  || ||||||||||||||||||||||  ||    
T  26724949 ttattaagaaaactaaaatataagaatttgaagtataattttttgtgttttctttggaataagttttctgagaagatgtaaaaacaattttcattggtta 26725048  T
Q  193 ttgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaa 260  Q
    |||||||||       |  ||||| || |||| |||||||||||| ||| |||||  |||||||||||    
T  26725049 ttgattatggagaaaatagaagagagataaaactgaatgtaatttgcatataatttcatgagaataaa 26725116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 87 - 327
Target Start/End: Original strand, 23910465 - 23910687
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||| ||||||||||||||||  ||||||  ||||||||||||||||| |||||||||||||||| |||||||||| |||||||||    
T  23910465 tcacacttattaagaaaattaaaacataagaatttagagtatagctttttgtgttttctttgtaaaaagttttataggaagatgtaaaaataattttcat 23910564  T
Q  187 tgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaacnnnnnnnntattgaaaaagataaaa 286  Q
    || |||||| |||||                  |||||||||||||||||| ||||||||| |||||||||||||        | |||||||||||||||    
T  23910565 tggctattggttatg------------------gaaaattgaatgtaatttgcatttaattatatgagaataaacaaaaaaaatcttgaaaaagataaaa 23910646  T
Q  287 gtttgtcnnnnnnncttatattttgggacaaagaaaatgtg 327  Q
     ||||||       |||||||||||||||||| ||||||||    
T  23910647 atttgtcttttttgcttatattttgggacaaaaaaaatgtg 23910687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 87 - 195
Target Start/End: Complemental strand, 31837091 - 31836983
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||||||||||||||||| ||| |||||| |||||||| ||||||||| ||||||||||||||||  ||| |||||||||||||||    
T  31837091 tcacacttattaagaaaactaaaacataagaagttggagtatagttttttgtattttctttggaaaaagttttataggaatatgcaaaaacaattttcat 31836992  T
Q  187 tgactattg 195  Q
    |||||||||    
T  31836991 tgactattg 31836983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 95 - 261
Target Start/End: Complemental strand, 53270398 - 53270231
Alignment:
Q  95 attaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattgactatt 194  Q
    |||||||||| |||| |||||||||||| |||||| |||||||||||||||||||||||||||| |||| | |||| ||||| ||||||||||| |||||    
T  53270398 attaagaaaattaaa-cataagaatttggagtatagttttttgtgttttctttgaaaaaagtttcatagaaagatgaaaaaataattttcattgcctatt 53270300  T
Q  195 gattatgnnnnnnntgaaagaggg--agaaaattgaatgtaattttcatttaattctatgagaataaac 261  Q
    | |||||       |||||||| |  |||||||||||||||||||  |||||||| |||||||||||||    
T  53270299 ggttatggaaaaaatgaaagagagaaagaaaattgaatgtaatttgtatttaattttatgagaataaac 53270231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 87 - 259
Target Start/End: Complemental strand, 2927462 - 2927289
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataatttttt-gtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttca 185  Q
    |||||||||||||||||||||||||||||||||||| || ||| |||||| || ||||||||| || ||||||||| ||| |||||||||| ||||||||    
T  2927462 tcacatttattaagaaaactaaaacataagaatttgtagcatagtttttttgtattttctttggaataagttttatgggaagatgtaaaaataattttca 2927363  T
Q  186 ttgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataa 259  Q
    ||| |||||| |||||       |  ||||| ||||||||| ||||||||||  ||||||||  ||||||||||    
T  2927362 ttggctattggttatgaaaaaaatagaagagagagaaaattaaatgtaatttgtatttaatttcatgagaataa 2927289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 87 - 188
Target Start/End: Original strand, 41476287 - 41476389
Alignment:
Q  87 tcacatttattaagaaaactaaaa-cataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttca 185  Q
    ||||| |||||||||||||||||| ||||| |||||| |||||| ||||||||||||||||||||||||||||||||| | |||||||||| ||||||||    
T  41476287 tcacacttattaagaaaactaaaaacataaaaatttggagtatagttttttgtgttttctttgaaaaaagttttatagaaagatgtaaaaataattttca 41476386  T
Q  186 ttg 188  Q
    |||    
T  41476387 ttg 41476389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 87 - 261
Target Start/End: Complemental strand, 8703277 - 8703107
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| ||||||| |||||||||||||||||||||| ||||| | ||||||||| || |||| |||||  ||||||||| ||||||||||||| ||||||    
T  8703277 tcacacttattaaaaaaactaaaacataagaatttggagtat-agtttttgtgtgtt-tttggaaaaaaatttataggaagatgtaaaaacaa-tttcat 8703181  T
Q  187 tgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaac 261  Q
    || ||||||||||||       ||||||||  |||||||| |||||||||| ||||||||| |||||||||||||    
T  8703180 tggctattgattatg-gaaaaatgaaagagaaagaaaatttaatgtaatttgcatttaattttatgagaataaac 8703107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 87 - 261
Target Start/End: Complemental strand, 9055164 - 9054994
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| ||||||| |||||||||||||||||||||| ||||| | ||||||||| || |||| |||||  ||||||||| ||||||||||||| ||||||    
T  9055164 tcacacttattaaaaaaactaaaacataagaatttggagtat-agtttttgtgtgtt-tttggaaaaaaatttataggaagatgtaaaaacaa-tttcat 9055068  T
Q  187 tgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaac 261  Q
    || ||||||||||||       ||||||||  |||||||| |||||||||| ||||||||| |||||||||||||    
T  9055067 tggctattgattatg-gaaaaatgaaagagaaagaaaatttaatgtaatttgcatttaattttatgagaataaac 9054994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 101 - 258
Target Start/End: Original strand, 20847235 - 20847391
Alignment:
Q  101 aaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattgactattgattat 200  Q
    |||| ||||||||||||||||| ||||||||||| ||||||||||||| || |||||| |||||| |||||  |||||||||||||||   |||||||||    
T  20847235 aaaattaaaacataagaatttggagtataatttt-tgtgttttctttggaataagtttcataggaagatgtgcaaacaattttcattggtaattgattat 20847333  T
Q  201 gnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaata 258  Q
    |       |||||||| |  ||||||||||||||||| ||||||||| ||||||||||    
T  20847334 ggagaaaatgaaagagaggaaaaattgaatgtaatttgcatttaattttatgagaata 20847391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 93 - 261
Target Start/End: Original strand, 32619787 - 32619956
Alignment:
Q  93 ttattaagaaaactaa-aacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattgact 191  Q
    |||||||||||||||  ||||| |||||||| |||||||| |||||||||||||||| || | |||||||| || |||||||||| ||||||||||| ||    
T  32619787 ttattaagaaaactatgaacatgagaatttggagtataatattttgtgttttctttggaataggttttataagaagatgtaaaaataattttcattggct 32619886  T
Q  192 attgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaac 261  Q
    |||| |||||       ||  | || |||||||||||||||||||| ||||||||| ||| |||||||||    
T  32619887 attggttatggagaaattgggatagagagaaaattgaatgtaatttgcatttaattttattagaataaac 32619956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 87 - 201
Target Start/End: Complemental strand, 29235359 - 29235245
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||||||||||||||||||||  |||||| |||||||| ||||||||  |||| |||| |||||| |||||||||| |||||||||    
T  29235359 tcacacttattaagaaaactaaaacataagaatttagagtatagttttttgtattttctttagaaaacgtttaataggaagatgtaaaaataattttcat 29235260  T
Q  187 tgactattgattatg 201  Q
    || |||||| |||||    
T  29235259 tggctattggttatg 29235245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 87 - 259
Target Start/End: Complemental strand, 26208186 - 26208014
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||||||||||||||||||||  |||||| ||||||||||||| | || || |||||| || | | ||||||||||||||||||||    
T  26208186 tcacacttattaagaaaactaaaacataagaatttagagtatagttttttgtgttttgtctggaataagtttcatggtaagatgtaaaaacaattttcat 26208087  T
Q  187 tgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataa 259  Q
    || ||||| ||| ||       || ||||  |||||||||||||||||||  ||||| | | |||||||||||    
T  26208086 tggctatttattgtggagaaaatggaagaaagagaaaattgaatgtaattggcatttgaatttatgagaataa 26208014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 87 - 188
Target Start/End: Complemental strand, 10115077 - 10114976
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| ||||||||||||||||||||||  | |||| |  |||||||||||| || ||||||||| ||||||||||||| ||||||||||||||||||||    
T  10115077 tcacacttattaagaaaactaaaacatagtagtttgtaacataattttttgtattatctttgaaataagttttataggaagatgtaaaaacaattttcat 10114978  T
Q  187 tg 188  Q
    ||    
T  10114977 tg 10114976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 87 - 188
Target Start/End: Complemental strand, 10014435 - 10014334
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| ||||||||||||||||||||||  | |||| |  |||||| ||||| || ||||||||| ||||||||||||| ||||||||||||||||||||    
T  10014435 tcacacttattaagaaaactaaaacatagtagtttgtaacataattgtttgtattatctttgaaataagttttataggaagatgtaaaaacaattttcat 10014336  T
Q  187 tg 188  Q
    ||    
T  10014335 tg 10014334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 87 - 188
Target Start/End: Complemental strand, 10252177 - 10252076
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| ||||||||||||||||||||||  | |||| |  |||||| ||||| || ||||||||| ||||||||||||| ||||||||||||||||||||    
T  10252177 tcacacttattaagaaaactaaaacatagtagtttgtaacataattgtttgtattatctttgaaataagttttataggaagatgtaaaaacaattttcat 10252078  T
Q  187 tg 188  Q
    ||    
T  10252077 tg 10252076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 93 - 188
Target Start/End: Original strand, 22479012 - 22479107
Alignment:
Q  93 ttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattg 188  Q
    ||||||||||||||||||||||  | |||| |  ||| ||||||||||| ||||||||| ||||||||||||| |||||||||||| |||||||||    
T  22479012 ttattaagaaaactaaaacatagtagtttgtaacatagttttttgtgttatctttgaaataagttttataggaagatgtaaaaacacttttcattg 22479107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 87 - 201
Target Start/End: Complemental strand, 47116021 - 47115907
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||||||||||| |||||||||||||||||||||  |||||||||||||||||||  |||  || || |||||| | | ||||||||| |||||||| |    
T  47116021 tcacatttattaaaaaaactaaaacataagaatttagagtataattttttgtgtttgttttagaataaattttatggaaagatgtaaaagcaattttctt 47115922  T
Q  187 tgactattgattatg 201  Q
    ||  |||||||||||    
T  47115921 tggttattgattatg 47115907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 87 - 198
Target Start/End: Original strand, 33973518 - 33973630
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataatttt-ttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttca 185  Q
    ||||| ||||||| |||||||||| |||| |||||| |||||| |||| ||||||||||||| ||||||||||||||| | || || |||| ||||||||    
T  33973518 tcacacttattaacaaaactaaaatataaaaatttggagtatagtttttttgtgttttctttaaaaaaagttttatagaaagacgtcaaaataattttca 33973617  T
Q  186 ttgactattgatt 198  Q
     || |||||||||    
T  33973618 gtggctattgatt 33973630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 87 - 247
Target Start/End: Original strand, 8096970 - 8097130
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| ||||||||||||||||||||||  | |||| |  ||| ||| ||||||| || |||||| ||||||||||||| |||||||||| |||||||||    
T  8096970 tcacacttattaagaaaactaaaacatagtagtttgcaacatagtttcttgtgttatccttgaaataagttttataggaagatgtaaaaataattttcat 8097069  T
Q  187 tgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaatt 247  Q
    ||  ||||| ||||        |||||||| ||| |||||||||| | ||| |||||||||    
T  8097070 tggttattgcttattgagaaaatgaaagagagagcaaattgaatgcactttgcatttaatt 8097130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 87 - 188
Target Start/End: Complemental strand, 31126377 - 31126276
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||||||| || ||   |||||| ||||||||||||||||| || |||||| ||||||||| | | |||||||||| |||||||||    
T  31126377 tcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttgaaataagttttatggaaagatgtaaaaataattttcat 31126278  T
Q  187 tg 188  Q
    ||    
T  31126277 tg 31126276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 88 - 185
Target Start/End: Original strand, 47443927 - 47444023
Alignment:
Q  88 cacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttca 185  Q
    |||||||||||||||||||||||||||  | |||| |  ||| ||||||||||| ||||||||| || ||||||| || |||||||||||||||||||    
T  47443927 cacatttattaagaaaactaaaacatattagtttgtaacatagttttttgtgttatctttgaaataaattttata-gaagatgtaaaaacaattttca 47444023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 96 - 188
Target Start/End: Original strand, 3084141 - 3084233
Alignment:
Q  96 ttaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattg 188  Q
    ||||||||||||||| || ||||||||||||||||||| ||||||  || || |||  |||||||| ||| |||||||||||||| |||||||    
T  3084141 ttaagaaaactaaaatatgagaatttgaagtataatttcttgtgtcctccttaaaattagttttatgggaagatgtaaaaacaatattcattg 3084233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 153 - 254
Target Start/End: Original strand, 34722623 - 34722724
Alignment:
Q  153 aagttttataggatgatgtaaaaacaattttcattgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatg 252  Q
    |||||||||| || |||||||||||||||||||||| |||||| |||||       |||||  | |||||||||||||||||||| ||||||||| ||||    
T  34722623 aagttttataagaagatgtaaaaacaattttcattggctattggttatgcaaaaaatgaaaaggagagaaaattgaatgtaatttacatttaattttatg 34722722  T
Q  253 ag 254  Q
    ||    
T  34722723 ag 34722724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 131 - 259
Target Start/End: Complemental strand, 3972402 - 3972275
Alignment:
Q  131 ttttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattgactattgattatgnnnnnnntgaaagagggagaaaattgaat 230  Q
    |||||||||||||||||||| || ||||||| ||| |||||||||||||||||||||  |||||| ||| |       || ||||| ||  |||||||||    
T  3972402 ttttttgtgttttctttgaataa-gttttatgggaagatgtaaaaacaattttcattagctattggttaggaagaaaatggaagagagaacaaattgaat 3972304  T
Q  231 gtaattttcatttaattctatgagaataa 259  Q
    ||||||| |||||||||  ||||||||||    
T  3972303 gtaatttgcatttaatttcatgagaataa 3972275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 131 - 259
Target Start/End: Original strand, 3997476 - 3997603
Alignment:
Q  131 ttttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattgactattgattatgnnnnnnntgaaagagggagaaaattgaat 230  Q
    |||||||||||||||||||| || ||||||| ||| |||||||||||||||||||||  |||||| ||| |       || ||||| ||  |||||||||    
T  3997476 ttttttgtgttttctttgaataa-gttttatgggaagatgtaaaaacaattttcattagctattggttaggaagaaaatggaagagagaacaaattgaat 3997574  T
Q  231 gtaattttcatttaattctatgagaataa 259  Q
    ||||||| |||||||||  ||||||||||    
T  3997575 gtaatttgcatttaatttcatgagaataa 3997603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 94 - 188
Target Start/End: Original strand, 22455967 - 22456061
Alignment:
Q  94 tattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattg 188  Q
    |||||||||||||||||||||  | |||| |  ||| |||||||||||  |||||||| ||||||||||||| ||| ||||||||||||| ||||    
T  22455967 tattaagaaaactaaaacatagtagtttgtaacatagttttttgtgttaactttgaaataagttttataggaagatataaaaacaattttgattg 22456061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 168 - 259
Target Start/End: Original strand, 47866946 - 47867036
Alignment:
Q  168 atgtaaaaacaattttcattgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataa 259  Q
    |||||||||| |||||||||| ||||||||||||       || ||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  47866946 atgtaaaaaccattttcattggctattgattatggagaaagtggaagagagagaaaattgaatgtaatttgcatttaatt-tatgagaataa 47867036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 87 - 184
Target Start/End: Original strand, 25242130 - 25242227
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttc 184  Q
    ||||| ||||||||||||||||||||||  | |||| |  ||| ||||||||||| ||||| ||| ||||||||||| | |||| |||||||||||||    
T  25242130 tcacacttattaagaaaactaaaacatagtagtttgtaacatagttttttgtgttatctttaaaataagttttatagaaagatgaaaaaacaattttc 25242227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 87 - 188
Target Start/End: Complemental strand, 34022764 - 34022663
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||||||| || ||   |||||| ||||||||||||||||| || |||||| ||||||||| | | |||||||||| |||| ||||    
T  34022764 tcacacttattaagaaaactaatacttagtgatttgaggtataattttttgtgttctccttgaaataagttttatggaaagatgtaaaaataattctcat 34022665  T
Q  187 tg 188  Q
    ||    
T  34022664 tg 34022663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 91 - 179
Target Start/End: Complemental strand, 17587867 - 17587779
Alignment:
Q  91 atttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaa 179  Q
    ||||||||||||||||||||||||  |||||| | |||| ||| || |||| |  |||||| ||||||||||||| |||||||||||||    
T  17587867 atttattaagaaaactaaaacatagtaatttgcaatatagtttcttttgttattcttgaaataagttttataggaagatgtaaaaacaa 17587779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 87 - 187
Target Start/End: Complemental strand, 21654410 - 21654310
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||||||| || ||   |||||| ||||||||||||||||| || |||||| |||||| || | | |||||||||| |||||||||    
T  21654410 tcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttgaaataagtttcatggaaagatgtaaaaataattttcat 21654311  T
Q  187 t 187  Q
    |    
T  21654310 t 21654310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 87 - 188
Target Start/End: Complemental strand, 38401550 - 38401445
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaag----tataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattt 182  Q
    ||||| ||||||||||||||||||||||  | |||| |     |||| ||||||||||| ||||||||| ||||||||||||  |||||||||| |||||    
T  38401550 tcacacttattaagaaaactaaaacatagtagtttgtaacatatatagttttttgtgttatctttgaaataagttttatagggagatgtaaaaataattt 38401451  T
Q  183 tcattg 188  Q
    ||||||    
T  38401450 tcattg 38401445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 170 - 247
Target Start/End: Complemental strand, 38674959 - 38674882
Alignment:
Q  170 gtaaaaacaattttcattgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaatt 247  Q
    ||||||||||||||||||||||||||||||||       |||||||| ||||||||||||| ||||||  ||||||||    
T  38674959 gtaaaaacaattttcattgactattgattatgaagaaaatgaaagagagagaaaattgaatctaatttgtatttaatt 38674882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 87 - 201
Target Start/End: Original strand, 8769531 - 8769643
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| ||||||||||||||||||||||| |||| | |||||| ||||| ||||||| |||  |||||| || || ||| | |||||||| |||||| ||    
T  8769531 tcacacttattaagaaaactaaaacataacaattaggagtatagtttttggtgtttttttt--aaaaagattcatgggaagttgtaaaaataatttttat 8769628  T
Q  187 tgactattgattatg 201  Q
    || ||| ||||||||    
T  8769629 tggctaatgattatg 8769643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 135 - 188
Target Start/End: Original strand, 16032987 - 16033040
Alignment:
Q  135 ttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattg 188  Q
    ||||||| || |||||| ||||||||||||| ||||||||||||||||||||||    
T  16032987 ttgtgttatccttgaaataagttttataggaagatgtaaaaacaattttcattg 16033040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 131 - 188
Target Start/End: Complemental strand, 21214363 - 21214306
Alignment:
Q  131 ttttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattg 188  Q
    ||||||||||| | ||||||| ||||||||||| | ||||||||||||||||||||||    
T  21214363 ttttttgtgttatttttgaaataagttttatagaaagatgtaaaaacaattttcattg 21214306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 87 - 188
Target Start/End: Complemental strand, 31292777 - 31292676
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| ||||| | |||||||||||||   ||||||||||||||||| || |||| || ||| ||  |||| ||| ||| ||||||||||||||||||||    
T  31292777 tcacacttattgaaaaaactaaaacatggtaatttgaagtataatttcttttgttctccttggaattagttctatgggaagatgtaaaaacaattttcat 31292678  T
Q  187 tg 188  Q
    ||    
T  31292677 tg 31292676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 87 - 188
Target Start/End: Complemental strand, 34195054 - 34194953
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| ||||||||||||||||||||||  | |||| |  ||| ||| |||| ||  |  ||||| ||||||||||||| ||||||||||||||||||||    
T  34195054 tcacacttattaagaaaactaaaacatagtagtttgcaacatagtttcttgtcttacccatgaaataagttttataggaagatgtaaaaacaattttcat 34194955  T
Q  187 tg 188  Q
    ||    
T  34194954 tg 34194953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 87 - 188
Target Start/End: Complemental strand, 55400903 - 55400802
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||||||| || ||   |||||| ||||||||||||||||| |||||| || |||||| || | | |||||||||| |||| ||||    
T  55400903 tcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctctttggaataagtttcatggaaagatgtaaaaataattctcat 55400804  T
Q  187 tg 188  Q
    ||    
T  55400803 tg 55400802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 209 - 261
Target Start/End: Original strand, 48802554 - 48802606
Alignment:
Q  209 tgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaac 261  Q
    |||||||| |||||||||||||||||||| |||||| || |||||||||||||    
T  48802554 tgaaagagagagaaaattgaatgtaatttgcatttacttttatgagaataaac 48802606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 87 - 201
Target Start/End: Original strand, 8764631 - 8764743
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| ||||||| ||||||||||||||| |||| | ||||||  |||||||||||| ||| ||||||  || || ||| | |||||||| |||||| ||    
T  8764631 tcacacttattaaaaaaactaaaacataacaattaggagtatagctttttgtgttttttttaaaaaaa--ttcatgggaagttgtaaaaataatttttat 8764728  T
Q  187 tgactattgattatg 201  Q
    || ||| ||||||||    
T  8764729 tggctaatgattatg 8764743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 97 - 183
Target Start/End: Original strand, 30454687 - 30454773
Alignment:
Q  97 taagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaatttt 183  Q
    ||||||||||||||||||  | |||| |  ||| ||| ||||||| || |||||| ||||||||||| | |||||||||||||||||    
T  30454687 taagaaaactaaaacatagtagtttgcaacatagtttcttgtgttatccttgaaataagttttatagaaagatgtaaaaacaatttt 30454773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 87 - 201
Target Start/End: Complemental strand, 30612343 - 30612229
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| ||||||||||||| |||| |||  ||||| |  ||||||||||| |||| ||||| |||  ||||| |||| | ||||||||||||||| ||||    
T  30612343 tcacacttattaagaaaacaaaaatatagtaatttaagatataattttttatgttctctttaaaatgagtttcatagaaagatgtaaaaacaattctcat 30612244  T
Q  187 tgactattgattatg 201  Q
    ||  || ||||||||    
T  30612243 tggttaatgattatg 30612229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 87 - 188
Target Start/End: Original strand, 37324038 - 37324140
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagtttt-ataggatgatgtaaaaacaattttca 185  Q
    ||||| |||||||||||||||| || ||   ||||||  |||||||||||||||| ||||||||| ||||||| || | | |||||||||| |||| |||    
T  37324038 tcacacttattaagaaaactaacacttagtgatttgagatataattttttgtgttatctttgaaataagttttcatggaaagatgtaaaaataattctca 37324137  T
Q  186 ttg 188  Q
    |||    
T  37324138 ttg 37324140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 87 - 184
Target Start/End: Original strand, 46557122 - 46557219
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtata-attttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttc 184  Q
    ||||||||||||||||||||||| |||||||||||  |  |||  |||||||||||||||||  || |||||| || ||| |||||||||| |||||||    
T  46557122 tcacatttattaagaaaactaaagcataagaattt-tatcatagtttttttgtgttttctttagaataagtttcatgggaagatgtaaaaataattttc 46557219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 87 - 181
Target Start/End: Complemental strand, 51309578 - 51309484
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaatt 181  Q
    ||||||||||||||||||  ||||||||  | ||||| ||||||||||||||||| |  ||| || |||||| |||| | |||||| ||||||||    
T  51309578 tcacatttattaagaaaataaaaacatagtagtttgaggtataattttttgtgttcttcttggaataagtttcatagaaagatgtataaacaatt 51309484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 131 - 187
Target Start/End: Complemental strand, 6784446 - 6784390
Alignment:
Q  131 ttttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcatt 187  Q
    ||||||||||| ||||| ||| || |||||||||| |||||||||| ||||||||||    
T  6784446 ttttttgtgttatctttcaaataaattttataggaagatgtaaaaataattttcatt 6784390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 209 - 261
Target Start/End: Original strand, 33974633 - 33974685
Alignment:
Q  209 tgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaac 261  Q
    ||||||||  |||||||| |||||||||| ||||||||| |||||||||||||    
T  33974633 tgaaagagaaagaaaatttaatgtaatttgcatttaattttatgagaataaac 33974685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 91 - 187
Target Start/End: Complemental strand, 51255347 - 51255251
Alignment:
Q  91 atttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcatt 187  Q
    |||||||||||||||||| || ||  ||| ||||||||||||||||||||| || | |||| |||||| || | |  ||||||||| |||| |||||    
T  51255347 atttattaagaaaactaacacgtagtaatatgaagtataattttttgtgttctcctagaaataagtttcatggaaatatgtaaaaataattctcatt 51255251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 171 - 259
Target Start/End: Original strand, 46557237 - 46557325
Alignment:
Q  171 taaaaacaattttcattgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataa 259  Q
    |||||| ||||||||||| |||||  |||||       |||||||| ||||||||| |||||||||| |||||||||  ||||||||||    
T  46557237 taaaaataattttcattggctattagttatggaaaaaatgaaagagagagaaaattaaatgtaatttacatttaatttcatgagaataa 46557325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 153 - 188
Target Start/End: Original strand, 54725628 - 54725663
Alignment:
Q  153 aagttttataggatgatgtaaaaacaattttcattg 188  Q
    ||||||||||||| ||||||||||||||||||||||    
T  54725628 aagttttataggaagatgtaaaaacaattttcattg 54725663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 219 - 261
Target Start/End: Original strand, 41476413 - 41476455
Alignment:
Q  219 agaaaattgaatgtaattttcatttaattctatgagaataaac 261  Q
    |||||||||||| |||||| ||||||||| |||||||||||||    
T  41476413 agaaaattgaatctaatttgcatttaattttatgagaataaac 41476455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 91 - 141
Target Start/End: Complemental strand, 46303739 - 46303689
Alignment:
Q  91 atttattaagaaaactaaaacataagaatttgaagtataattttttgtgtt 141  Q
    ||||||||||||||||||||||||  ||||| || ||||||||||| ||||    
T  46303739 atttattaagaaaactaaaacatagtaatttaaaatataattttttatgtt 46303689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 87 - 157
Target Start/End: Complemental strand, 46580700 - 46580630
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagtt 157  Q
    ||||| |||||||||||||||| || ||   |||||| ||||||||||||||||| || |||||| |||||    
T  46580700 tcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttgaaataagtt 46580630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 87 - 188
Target Start/End: Complemental strand, 28793327 - 28793226
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||||||| || ||   |||||| ||||||||||||||||| || ||| || || ||| || | | |||||||||| |||| ||||    
T  28793327 tcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttatccttggaataaatttcatggaaagatgtaaaaataattctcat 28793228  T
Q  187 tg 188  Q
    ||    
T  28793227 tg 28793226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 87 - 188
Target Start/End: Original strand, 36188961 - 36189062
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| ||||||||||| |||||||| |  ||||||| ||||| |||||||| || || |||||| |||||| || | | || |||||| ||||| ||||    
T  36188961 tcacacttattaagaaatctaaaacacagtaatttgaggtatagttttttgtattctccttgaaataagtttcatggaaagaagtaaaaccaattctcat 36189060  T
Q  187 tg 188  Q
    ||    
T  36189061 tg 36189062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 91 - 188
Target Start/End: Original strand, 45347672 - 45347769
Alignment:
Q  91 atttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattg 188  Q
    |||||||||||||||||| || ||   |||||| |||| |||||||||||| || ||| || |||||| || | | |||||||||| |||| ||||||    
T  45347672 atttattaagaaaactaacacttagtgatttgaggtatgattttttgtgttctccttggaataagtttcatggaaagatgtaaaaataattctcattg 45347769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 135 - 188
Target Start/End: Original strand, 46918213 - 46918266
Alignment:
Q  135 ttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattg 188  Q
    ||||||| || || ||| ||||||||||||| ||| ||||||||||||||||||    
T  46918213 ttgtgttatccttaaaataagttttataggaagatctaaaaacaattttcattg 46918266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 87 - 188
Target Start/End: Complemental strand, 49068216 - 49068115
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    |||||||||||||||||||||| || ||   ||||||  |||||||||||||||| || |  ||| |||||| || | | |||||||||| |||| ||||    
T  49068216 tcacatttattaagaaaactaacacttagtgatttgagatataattttttgtgttctcctataaataagtttcatggaaagatgtaaaaataattctcat 49068117  T
Q  187 tg 188  Q
    ||    
T  49068116 tg 49068115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 209 - 261
Target Start/End: Complemental strand, 9264058 - 9264006
Alignment:
Q  209 tgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaac 261  Q
    |||||||| || ||||||  ||||||||| ||||||||| |||||||||||||    
T  9264058 tgaaagagagataaaattagatgtaatttgcatttaattttatgagaataaac 9264006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 110; Significance: 4e-55; HSPs: 57)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 87 - 327
Target Start/End: Original strand, 6110191 - 6110433
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||||||||||||||||||||| ||||||  ||||||||||||||| | |||||||||||||||| ||||||||||||||||||||    
T  6110191 tcacacttattaagaaaactaaaacataagaatttggagtatagctttttgtgttttcttcggaaaaagttttataggaagatgtaaaaacaattttcat 6110290  T
Q  187 tgactattgattatgnnnnnnntgaa--agagggagaaaattgaatgtaattttcatttaattctatgagaataaacnnnnnnnntattgaaaaagataa 284  Q
    || |||||| |||||       ||||  |||| |||||||||||||||||||| ||||||||| |||||||||||||        | ||| |||||||||    
T  6110291 tggctattggttatggaaaaaatgaaagagagagagaaaattgaatgtaatttgcatttaattttatgagaataaacaaaaaaaatcttggaaaagataa 6110390  T
Q  285 aagtttgtcnnnnnnncttatattttgggacaaagaaaatgtg 327  Q
    |||||||||       |||||||||||||||||||||||||||    
T  6110391 aagtttgtcttttttgcttatattttgggacaaagaaaatgtg 6110433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 87 - 261
Target Start/End: Complemental strand, 19264268 - 19264093
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||||||||||||||||||||  ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||    
T  19264268 tcacacttattaagaaaactaaaacataagaatttagagtataattttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaattttcat 19264169  T
Q  187 tgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaatttt-catttaattctatgagaataaac 261  Q
    || |||||| |||||       | |||||| ||||||||||||||||||||| ||||||||| |||||||||||||    
T  19264168 tggctattggttatggaaaaaattaaagagagagaaaattgaatgtaattttgcatttaattttatgagaataaac 19264093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 87 - 327
Target Start/End: Complemental strand, 41528425 - 41528184
Alignment:
Q  87 tcacatttattaagaaaactaaaa-cataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttca 185  Q
    ||||| |||||||||||| ||||| ||||||||||||||||||| |||||||||||||||||||||    |||||||||| |||||||||||||||||||    
T  41528425 tcacacttattaagaaaattaaaaacataagaatttgaagtatagttttttgtgttttctttgaaattttttttataggaagatgtaaaaacaattttca 41528326  T
Q  186 ttgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaacnnnnnnnntattgaaaaagataaa 285  Q
    ||| |||||| |||||       |||||||  |||||||||||||||||||| ||||||||| |||||||||||||        | ||||||||||||||    
T  41528325 ttggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataaacaaaaaaaatcttgaaaaagataaa 41528226  T
Q  286 agtttgtcnnnnnnncttatattttgggacaaagaaaatgtg 327  Q
    ||||||||       |||||||||||||||||| ||||||||    
T  41528225 agtttgtcttttttgcttatattttgggacaaacaaaatgtg 41528184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 87 - 324
Target Start/End: Complemental strand, 45085425 - 45085188
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||| ||||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||| ||||||||||||||||||||    
T  45085425 tcacacttattaagaaaattaaaacataagaatttggagtatagttttttgtattttctttgaaaaaagttttataggaagatgtaaaaacaattttcat 45085326  T
Q  187 tgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaacnnnnnnnntattgaaaaagataaaa 286  Q
    |  | |||| |||||       |||||||| |||||||||||||||||||| ||||||||| |||||||||||||        | ||  |||||||||||    
T  45085325 tagccattggttatggaaaaaatgaaagagagagaaaattgaatgtaatttgcatttaattttatgagaataaacaaaaaaaatcttagaaaagataaaa 45085226  T
Q  287 gtttgtcnnnnnnncttatattttgggacaaagaaaat 324  Q
    |||| ||       ||||||||||||||||||||||||    
T  45085225 gtttatcttttttgcttatattttgggacaaagaaaat 45085188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 87 - 261
Target Start/End: Complemental strand, 45660536 - 45660359
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaat---ttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaatttt 183  Q
    |||||||||||||||||||||||||||||||||   ||| |||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  45660536 tcacatttattaagaaaactaaaacataagaataatttggagtatagttttttgtgttttctttgaaaaaagttttataggaagatgtaaaaacaatttt 45660437  T
Q  184 cattgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaac 261  Q
    ||||| |||||| |||||       |||||||| || |||||| |||||||||| ||||||||| |||||||||||||    
T  45660436 cattggctattggttatggagaaaatgaaagagagataaaattaaatgtaatttgcatttaattttatgagaataaac 45660359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 87 - 261
Target Start/End: Complemental strand, 3201494 - 3201320
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| |||||||||||||| | ||||||||||||||||||||    
T  3201494 tcacacttattaagaaaactaaaacataagaatttaaagtatagttttttgtgttttctttggaaaaagttttatagaaagatgtaaaaacaattttcat 3201395  T
Q  187 tgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaac 261  Q
    || |||||| |||||       |||||||  || ||||||||||||||||| ||||||||| |||||||||||||    
T  3201394 tggctattggttatggaaaaaatgaaagaaagataaaattgaatgtaatttgcatttaattttatgagaataaac 3201320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 93 - 327
Target Start/End: Original strand, 28599146 - 28599381
Alignment:
Q  93 ttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattgacta 192  Q
    |||||||||||||||||||||||||||||| |||||| |||||||||||||||||| |||||| ||||||||| |||||||||| ||||||||||| |||    
T  28599146 ttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagatttataggaagatgtaaaaataattttcattggcta 28599245  T
Q  193 ttgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaac-nnnnnnnntattgaaaaagataaaagtttg 291  Q
    ||| |||||       |||||||  |||||||||||||||||| | ||||||||| |||||||||||||         | ||| ||||||||||||||||    
T  28599246 ttggttatggaaaaaatgaaagaaagagaaaattgaatgtaatatgcatttaattttatgagaataaacaaaaaaaaatcttggaaaagataaaagtttg 28599345  T
Q  292 tcnnnnnnncttatattttgggacaaagaaaatgtg 327  Q
    ||        ||||||||||||||||||||||||||    
T  28599346 tcttttttgattatattttgggacaaagaaaatgtg 28599381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 87 - 259
Target Start/End: Complemental strand, 35517291 - 35517119
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||||||||||||||||||||| |||||| |||||||||||||||||| ||||||||||||||   |||||||||| |||||||||    
T  35517291 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttatagtgagatgtaaaaataattttcat 35517192  T
Q  187 tgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataa 259  Q
    || |||||| |||||       |||||||  |||||||||||||||||||| ||||||||| |||||||||||    
T  35517191 tggctattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 35517119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 88 - 261
Target Start/End: Original strand, 33198624 - 33198797
Alignment:
Q  88 cacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcatt 187  Q
    |||| |||||||||||||||||| ||||||||||| | | || ||||||||||||||||| ||| ||||||||||||| ||||||||||||||||| |||    
T  33198624 cacacttattaagaaaactaaaatataagaatttggactctagttttttgtgttttctttaaaagaagttttataggaagatgtaaaaacaattttgatt 33198723  T
Q  188 gactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaac 261  Q
    |  ||||| |||||       |||||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  33198724 ggttattggttatggagaaaatgaaagagagagaaaattgaatgtaatttgcatttaattctatgagaataaac 33198797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 94 - 261
Target Start/End: Complemental strand, 28858473 - 28858303
Alignment:
Q  94 tattaagaaaactaaaacataagaatttgaagtataat---tttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattgac 190  Q
    |||||||||||||||||||||||||||| || |||| |   |||||||||||||||||||||||||||||||| | |||||||||| ||||||||||| |    
T  28858473 tattaagaaaactaaaacataagaatttaaaatatagtagttttttgtgttttctttgaaaaaagttttatagaaagatgtaaaaataattttcattggc 28858374  T
Q  191 tattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaac 261  Q
    ||||| ||||        |||||||| |||||||||||||||||||| ||||||||| |||||||||||||    
T  28858373 tattggttattgtaaaaatgaaagagagagaaaattgaatgtaatttgcatttaattttatgagaataaac 28858303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 87 - 261
Target Start/End: Complemental strand, 12938410 - 12938236
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||||||||||||||||||||| |||||| ||||||||| ||||||||||| |||||||||||||   ||||||||||||||||||    
T  12938410 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgctttctttgaaataagttttataggaaagtgtaaaaacaattttcat 12938311  T
Q  187 tgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaac 261  Q
    || ||||||||||||       | |||||| || |||  |||||||||||| |||||||||  ||||||||||||    
T  12938310 tggctattgattatggagaaaataaaagagagataaatatgaatgtaatttgcatttaatttcatgagaataaac 12938236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 87 - 259
Target Start/End: Complemental strand, 11617192 - 11617020
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||| ||||||||||||||||| |||||| ||||| || |||||||||||||||||||||||||| ||||||||||||||||||||    
T  11617192 tcacacttattaagaaaattaaaacataagaatttggagtatagtttttggtattttctttgaaaaaagttttataggaagatgtaaaaacaattttcat 11617093  T
Q  187 tgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataa 259  Q
    || |||||| ||||        | |||||| |||||||||||||| ||||| ||||| ||| ||||| |||||    
T  11617092 tggctattggttatagtaaaaataaaagagagagaaaattgaatgaaatttgcattttattttatgaaaataa 11617020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 87 - 261
Target Start/End: Original strand, 24204521 - 24204695
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    |||||||||| |||||||||||||| |||||||||| |||||||||| |||||||||||||| || |||||||||||||  |||||||| ||||||||||    
T  24204521 tcacatttatcaagaaaactaaaacctaagaatttggagtataatttattgtgttttctttggaataagttttataggaatatgtaaaatcaattttcat 24204620  T
Q  187 tgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaac 261  Q
    || |||||| |||||       || ||||| ||||||||||||| |||||| ||||||||   ||||||||||||    
T  24204621 tggctattggttatgaagaaaatggaagagagagaaaattgaatataatttacatttaatatcatgagaataaac 24204695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 87 - 188
Target Start/End: Complemental strand, 43415569 - 43415468
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| ||| |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  43415569 tcacacttactaagaaaactaaaatataagaatttgaagtataattttttgtgttttctttaaaaaaagttttataggaagatgtaaaaacaattttcat 43415470  T
Q  187 tg 188  Q
    ||    
T  43415469 tg 43415468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 87 - 261
Target Start/End: Original strand, 6765925 - 6766100
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||| |||||||||| ||||||||||||| |||||| ||||||| ||| || || |||||||||| ||||||||||||||||| ||    
T  6765925 tcacacttattaagaaaattaaaacataaaaatttgaagtatagttttttatgttttcattggaataaattttataggaagatgtaaaaacaatttttat 6766024  T
Q  187 tgactattgattat-gnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaac 261  Q
    ||||||||| |||| |       || ||||| |||||||||||||||||||| |||||||||  ||||||||||||    
T  6766025 tgactattggttatggaaaaaaatggaagagagagaaaattgaatgtaatttacatttaatttaatgagaataaac 6766100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 87 - 259
Target Start/End: Original strand, 29524033 - 29524205
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||| |||||||||| |||||||||||| || |||||||||||||||||||||| || |||||| || ||| ||||||||||||||||||||    
T  29524033 tcacacttattatgaaaactaaagcataagaatttgtagcataattttttgtgttttctttggaataagtttcatgggaagatgtaaaaacaattttcat 29524132  T
Q  187 tgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataa 259  Q
    || | |||| |||||       | |||||| ||||||||| |||||||||| |||||||||  ||||||||||    
T  29524133 tggcaattggttatggaaaaaataaaagagagagaaaattaaatgtaatttgcatttaatttcatgagaataa 29524205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 113 - 261
Target Start/End: Complemental strand, 14874105 - 14873956
Alignment:
Q  113 taagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattgactattgattatgnnnnnnntgaa 212  Q
    ||||| |||| |||||| ||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| |||||| |||||       ||||    
T  14874105 taagagtttggagtatagttttttgtgttttctttgaaaaaagttttataggaagatgtaaaaataattttcattggctattggttatggagaaaatgaa 14874006  T
Q  213 agagggagaaaattgaatgtaattttca-tttaattctatgagaataaac 261  Q
    |||| || |||||| |||||||||| || ||||||| |||||||||||||    
T  14874005 agagagataaaattaaatgtaatttgcattttaattatatgagaataaac 14873956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 87 - 259
Target Start/End: Complemental strand, 25572213 - 25572042
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| ||||||||||||||||| |||||||||||| || ||| |||||||||||||||||| || |||||| || ||| ||||||||||||||||||||    
T  25572213 tcacacttattaagaaaactaaagcataagaatttgtagcatagttttttgtgttttctttggaataagtttcatgggaagatgtaaaaacaattttcat 25572114  T
Q  187 tgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataa 259  Q
    ||  ||||| |||||       || ||||| ||||||||| |||||||||| |||||||||  ||||||||||    
T  25572113 tggatattggttatg-gaaaaatggaagagagagaaaattaaatgtaatttgcatttaatttcatgagaataa 25572042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 87 - 259
Target Start/End: Original strand, 9864710 - 9864881
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataatttt-ttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttca 185  Q
    ||||| |||||||||||||||||||||||||||||| |||||| |||| |||||||||||||| || |||||| || ||| || ||||||||||||||||    
T  9864710 tcacacttattaagaaaactaaaacataagaatttggagtatagtttttttgtgttttctttggaataagtttcatgggaagaggtaaaaacaattttca 9864809  T
Q  186 ttgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataa 259  Q
    ||| | ||||||||||       || ||||  || ||||||||||||||||| |||||||||  ||||||||||    
T  9864810 ttggcaattgattatggagaaaatggaaga--gataaaattgaatgtaatttgcatttaatttcatgagaataa 9864881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 93 - 246
Target Start/End: Complemental strand, 5963362 - 5963210
Alignment:
Q  93 ttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattgacta 192  Q
    |||||||||||||||||| ||||||||||  ||| ||||||||||||||||||||  || ||||||||| ||| |||||||||| |||||| |||| |||    
T  5963362 ttattaagaaaactaaaatataagaatttagagtctaattttttgtgttttctttagaataagttttatggga-gatgtaaaaataatttttattggcta 5963264  T
Q  193 ttgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaat 246  Q
    ||| |||||       || ||||| |||||||||||||||||||| ||||||||    
T  5963263 ttggttatgaagaaaatggaagagagagaaaattgaatgtaatttgcatttaat 5963210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 87 - 187
Target Start/End: Complemental strand, 35023066 - 35022967
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| |||| |  |||||| |||||| ||||||||||||||||||||    
T  35023066 tcacacttattaagaaaactaaaacataagaatttggagtataattttttgtgtttt-tttggagtaagtttcataggaagatgtaaaaacaattttcat 35022968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 93 - 261
Target Start/End: Complemental strand, 33677645 - 33677477
Alignment:
Q  93 ttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattgacta 192  Q
    |||||| |||||||||||||||| ||||||||| ||| |||||| |||||| |||  |  ||||||||||||| ||||||||||||||||||||||||||    
T  33677645 ttattacgaaaactaaaacataaaaatttgaagaatagttttttatgttttttttttactaagttttataggaagatgtaaaaacaattttcattgacta 33677546  T
Q  193 ttgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaac 261  Q
    ||| |||||       |  |||||  |||||||||||||| |||  |||||||||  ||||||||||||    
T  33677545 ttggttatggagaaaattgaagagaaagaaaattgaatgttattagcatttaatttcatgagaataaac 33677477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 93 - 256
Target Start/End: Complemental strand, 8701764 - 8701601
Alignment:
Q  93 ttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattgacta 192  Q
    ||||||||||||||||||||||| |||||| || ||| |||||| ||||||||||| || |||||| || ||| |||||||||||||||||||||| |||    
T  8701764 ttattaagaaaactaaaacataaaaatttgtagcatagttttttatgttttctttggaataagtttcatgggaagatgtaaaaacaattttcattggcta 8701665  T
Q  193 ttgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaa 256  Q
    ||| |||||       || ||||| ||||||||| |||| |||||  ||||||||  |||||||    
T  8701664 ttggttatggaaaaaatggaagagagagaaaattaaatgaaatttgtatttaatttcatgagaa 8701601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 87 - 261
Target Start/End: Original strand, 7645219 - 7645396
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||||||||||||||||||||| |||||||| |||||||||||| ||  || || ||| || |||  |||||||||||||||||||    
T  7645219 tcacacttattaagaaaactaaaacataagaatttggagtataatattttgtgttttccttagaataaatttcatgggaacatgtaaaaacaattttcat 7645318  T
Q  187 tgactattgattatgnnnnnnntg---aaagagggagaaaattgaatgtaattttcatttaattctatgagaataaac 261  Q
    || ||||| ||||||       ||   ||  |  |||||||||||||||||||| |||||||||  ||||||||||||    
T  7645319 tggctattaattatggagaaaatggttaattatagagaaaattgaatgtaatttgcatttaatttcatgagaataaac 7645396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 87 - 187
Target Start/End: Original strand, 40808712 - 40808811
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| ||||||||||||||||| |||||||||||| || ||| |||||||||||||||||| || |||||| || ||| ||||||||||||||||||||    
T  40808712 tcacacttattaagaaaactaaagcataagaatttgtagcatagttttttgtgttttctttggaataagtttcat-ggaagatgtaaaaacaattttcat 40808810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 87 - 188
Target Start/End: Complemental strand, 26998485 - 26998384
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    |||||||||||||||||||||||||||   | |||| |  ||| ||||||||||| ||||| ||| ||||||||||||| ||||||||||||||||||||    
T  26998485 tcacatttattaagaaaactaaaacatggtagtttgtaagatagttttttgtgttatctttaaaataagttttataggaagatgtaaaaacaattttcat 26998386  T
Q  187 tg 188  Q
    ||    
T  26998385 tg 26998384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 89 - 259
Target Start/End: Original strand, 30830590 - 30830760
Alignment:
Q  89 acatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattg 188  Q
    |||||||||||||||| ||||||||||||| ||| |||||   |||||||||||| ||||||| |||||| ||  || ||| |||||| || ||||||||    
T  30830590 acatttattaagaaaattaaaacataagaaattggagtatgtctttttgtgttttttttgaaataagtttcatgagaagatttaaaaaaaaatttcattg 30830689  T
Q  189 actattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataa 259  Q
      ||||||||||        ||||| || |||||||||| ||||||||| |||||||||  ||||||||||    
T  30830690 gttattgattattgagaaaatgaaaaagagagaaaattgtatgtaatttgcatttaatttcatgagaataa 30830760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 87 - 188
Target Start/End: Complemental strand, 32010270 - 32010169
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||||||| |||||  | |||| | |||| ||||||||||| ||||||||| ||||||||||||| |||||||||| |||||||||    
T  32010270 tcacacttattaagaaaactaatacatagtagtttgtaatatagttttttgtgttatctttgaaataagttttataggaagatgtaaaaataattttcat 32010171  T
Q  187 tg 188  Q
    ||    
T  32010170 tg 32010169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 87 - 187
Target Start/End: Original strand, 35115795 - 35115896
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtg-ttttctttgaaaaaagttttataggatgatgtaaaaacaattttca 185  Q
    ||||| ||||||||| |||||||||||||||||||| |||||| ||||||||| |||| |||  || ||||||||||| | |||||||||||||||||||    
T  35115795 tcacacttattaagagaactaaaacataagaatttggagtatagttttttgtgtttttttttttaataagttttatagaaagatgtaaaaacaattttca 35115894  T
Q  186 tt 187  Q
    ||    
T  35115895 tt 35115896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 117 - 261
Target Start/End: Original strand, 40584422 - 40584564
Alignment:
Q  117 aatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattgactattgattatgnnnnnnntgaaagag 216  Q
    ||||||||| ||||||||  |||||||||||  || ||||||||| ||| ||||||||||||||||||||||  | ||| |||||       ||||||||    
T  40584422 aatttgaagcataatttt--gtgttttctttagaataagttttatgggaagatgtaaaaacaattttcattggttgttggttatgggaaaaatgaaagag 40584519  T
Q  217 ggagaaaattgaatgtaattttcatttaattctatgagaataaac 261  Q
     |||||||||||||||||||| |||||||||  |||| |||||||    
T  40584520 agagaaaattgaatgtaatttgcatttaatttcatgaaaataaac 40584564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 93 - 188
Target Start/End: Complemental strand, 38071157 - 38071062
Alignment:
Q  93 ttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattg 188  Q
    |||||||||||||||||||||   | |||| |  ||| ||||||||||| ||||||||| |||||||| |||| ||||||||||||||||||||||    
T  38071157 ttattaagaaaactaaaacatggtagtttgtaacatagttttttgtgttatctttgaaataagttttacaggaagatgtaaaaacaattttcattg 38071062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 87 - 188
Target Start/End: Original strand, 4891630 - 4891732
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtata-attttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttca 185  Q
    |||||||||||||||||||||||| |||  | |||| |  |||  ||||||||||| ||||||||| ||||||||||||| ||||||||||||||||| |    
T  4891630 tcacatttattaagaaaactaaaatatagtagtttgtaacatagtttttttgtgttatctttgaaataagttttataggaagatgtaaaaacaattttta 4891729  T
Q  186 ttg 188  Q
    |||    
T  4891730 ttg 4891732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 93 - 188
Target Start/End: Complemental strand, 32273837 - 32273738
Alignment:
Q  93 ttattaagaaaactaaaacata--ag--aatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattg 188  Q
    ||||||||||||||||||||||  ||  |||||| |  ||| ||||||||||| ||||||||| ||||||||||||| ||| ||||||||||||||||||    
T  32273837 ttattaagaaaactaaaacatagtagtcaatttgtaacatagttttttgtgttatctttgaaataagttttataggaagatataaaaacaattttcattg 32273738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 91 - 259
Target Start/End: Complemental strand, 44455153 - 44454987
Alignment:
Q  91 atttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattgac 190  Q
    |||||||||||||||||||| ||| ||||||| |||||| ||||||||||||| |||  || |||||| || |||  | ||||||| ||  ||||||| |    
T  44455153 atttattaagaaaactaaaatatatgaatttggagtatagttttttgtgttttattttgaataagtttcatgggaaaacgtaaaaaaaa--ttcattggc 44455056  T
Q  191 tattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataa 259  Q
    ||||||||||        || ||||| |  ||||||||||||||||| |||||||||  ||||||||||    
T  44455055 tattgattatagagaaaatggaagagaggaaaaattgaatgtaatttgcatttaatttcatgagaataa 44454987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 91 - 199
Target Start/End: Complemental strand, 32428138 - 32428029
Alignment:
Q  91 atttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttga-aaaaagttttataggatgatgtaaaaacaattttcattga 189  Q
    ||||||||| |||||||||||||||||||||| |||||| |  || ||||||| ||| | || |||||| || | |  ||||||||| ||||||||||||    
T  32428138 atttattaaaaaaactaaaacataagaatttggagtatagtccttggtgtttttttttataataagtttcatggaaacatgtaaaaataattttcattga 32428039  T
Q  190 ctattgatta 199  Q
    ||||||||||    
T  32428038 ctattgatta 32428029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 90 - 181
Target Start/End: Complemental strand, 9294816 - 9294725
Alignment:
Q  90 catttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaatt 181  Q
    ||||||||||||||||||||| |||  | |||||||||||||||||||| ||||  |||||| |||||| || | |  ||||||||||||||    
T  9294816 catttattaagaaaactaaaagatagtagtttgaagtataattttttgtatttttcttgaaataagtttcatggaaaaatgtaaaaacaatt 9294725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 143 - 189
Target Start/End: Original strand, 16494974 - 16495020
Alignment:
Q  143 tctttgaaaaaagttttataggatgatgtaaaaacaattttcattga 189  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||    
T  16494974 tctttgaaataagttttataggaagatgtaaaaacaattttcattga 16495020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 87 - 182
Target Start/End: Original strand, 33932915 - 33933010
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattt 182  Q
    ||||| ||||||||||||||||||||||  | |||| ||||||||||||||| || |  ||| |  ||||||||||| | |||||||| |||||||    
T  33932915 tcacacttattaagaaaactaaaacatagtattttgtagtataattttttgtattattcttggattaagttttatagaaagatgtaaacacaattt 33933010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 88 - 188
Target Start/End: Complemental strand, 4707585 - 4707488
Alignment:
Q  88 cacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcatt 187  Q
    ||||||||||||||| |||||||||| |   |||| |||||| |||||||||||||| ||  || |||||| |  ||| ||||| |||||||||||||||    
T  4707585 cacatttattaagaacactaaaacatga---tttggagtatagttttttgtgttttccttagaataagtttaacgggaagatgttaaaacaattttcatt 4707489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 87 - 178
Target Start/End: Original strand, 11825351 - 11825438
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaaca 178  Q
    ||||| |||||||||||||||||||||||||||||  | |||||    |||||||||||||| || |||||| || | | ||||||||||||    
T  11825351 tcacacttattaagaaaactaaaacataagaattttgaatataa----ttgtgttttctttggaataagtttcatggaaagatgtaaaaaca 11825438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 87 - 188
Target Start/End: Original strand, 792348 - 792449
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||||||| || ||   |||||| ||||||||||||||||| || ||| || |||||| || | | |||||||||| |||| ||||    
T  792348 tcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaataagtttcatggaaagatgtaaaaataattctcat 792447  T
Q  187 tg 188  Q
    ||    
T  792448 tg 792449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 135 - 200
Target Start/End: Complemental strand, 9709633 - 9709568
Alignment:
Q  135 ttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattgactattgattat 200  Q
    ||||||| || |||||| ||||||||||||| ||||| |||||||||||||||   ||||||||||    
T  9709633 ttgtgttatccttgaaacaagttttataggaagatgtgaaaacaattttcatttgttattgattat 9709568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 87 - 188
Target Start/End: Original strand, 14565365 - 14565466
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||||||| || ||   |||||| ||||||||||||||||| || ||| || |||||| || | | |||||||||| |||| ||||    
T  14565365 tcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaataagtttcatggaaagatgtaaaaataattctcat 14565464  T
Q  187 tg 188  Q
    ||    
T  14565465 tg 14565466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 87 - 188
Target Start/End: Original strand, 18833902 - 18834003
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| ||||||||||| |||||| ||   ||||||| ||||||||||||||||| |  ||| || |||||| || | | ||||||||||||||| ||||    
T  18833902 tcacacttattaagaaagctaaaatattgtaatttgaggtataattttttgtgttattcttggaataagtttcatggaaagatgtaaaaacaattatcat 18834001  T
Q  187 tg 188  Q
    ||    
T  18834002 tg 18834003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 87 - 188
Target Start/End: Complemental strand, 21539921 - 21539820
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||||||| || ||   |||||| ||||||||||||||||| || ||| || |||||| || | | |||||||||| |||| ||||    
T  21539921 tcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaataagtttcatggaaagatgtaaaaataattctcat 21539822  T
Q  187 tg 188  Q
    ||    
T  21539821 tg 21539820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 101 - 159
Target Start/End: Original strand, 5280536 - 5280595
Alignment:
Q  101 aaaactaaaacataagaatttgaagtata-attttttgtgttttctttgaaaaaagtttt 159  Q
    |||||||||||||||||||||| | ||||  |||||||||||||||| | ||||||||||    
T  5280536 aaaactaaaacataagaatttggactatagtttttttgtgttttcttgggaaaaagtttt 5280595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 87 - 150
Target Start/End: Original strand, 15858681 - 15858744
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaa 150  Q
    |||||||||||||||||||||| || ||   |||||| ||||||||||||||||| || |||||    
T  15858681 tcacatttattaagaaaactaatacttagtgatttgaggtataattttttgtgttctccttgaa 15858744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 87 - 181
Target Start/End: Complemental strand, 4092175 - 4092081
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaatt 181  Q
    ||||| |||||||||||||||| || ||   |||||| ||||||||||||||||| || ||| || |||||| || | | |||||||||| ||||    
T  4092175 tcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaataagtttcatggaaagatgtaaaaataatt 4092081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 87 - 188
Target Start/End: Complemental strand, 10478342 - 10478241
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||||||| || ||   | ||||  |||||||||||||||| || |||||| |||||| || | | |||||||||| |||| ||||    
T  10478342 tcacacttattaagaaaactaacacttagtgagttgagatataattttttgtgttctccttgaaataagtttcatggaaagatgtaaaaataattctcat 10478243  T
Q  187 tg 188  Q
    ||    
T  10478242 tg 10478241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 131 - 176
Target Start/End: Complemental strand, 20380247 - 20380202
Alignment:
Q  131 ttttttgtgttttctttgaaaaaagttttataggatgatgtaaaaa 176  Q
    ||||||||||| ||||||||| |||||||||||||  |||||||||    
T  20380247 ttttttgtgttatctttgaaataagttttataggaaaatgtaaaaa 20380202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 87 - 188
Target Start/End: Complemental strand, 28492684 - 28492583
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||||||| || |||  ||||||  |||||||||||||||| || ||| || |||||| || | |  ||||||||| |||| ||||    
T  28492684 tcacacttattaagaaaactaacacttaatgatttgagatataattttttgtgttctccttggaataagtttcatggaaatatgtaaaaataattctcat 28492585  T
Q  187 tg 188  Q
    ||    
T  28492584 tg 28492583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 87 - 188
Target Start/End: Original strand, 38071442 - 38071543
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||||||| || ||   ||||||||||||||||||||| || || ||  || ||||||| | | | |||||||||| |||| ||||    
T  38071442 tcacacttattaagaaaactaacacttagtgatttgaagtataattttttgtattctccttagaataagttttttggaaagatgtaaaaataattctcat 38071541  T
Q  187 tg 188  Q
    ||    
T  38071542 tg 38071543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 87 - 188
Target Start/End: Original strand, 38549635 - 38549736
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||||||| || ||   |||||| |||||||||||||| || || ||| || |||||| || | | |||||||||| |||| ||||    
T  38549635 tcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtattctccttggaataagtttcatggaaagatgtaaaaataattctcat 38549734  T
Q  187 tg 188  Q
    ||    
T  38549735 tg 38549736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 101 - 189
Target Start/End: Complemental strand, 44442286 - 44442197
Alignment:
Q  101 aaaactaaaacataagaatttgaagtataattt-tttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattga 189  Q
    ||||||||||||||| | |||| |  ||| ||| |||||||| | ||| ||| || ||||||| || |||||||||||||||||||||||    
T  44442286 aaaactaaaacataatagtttgtaacatagtttatttgtgttatttttaaaataaattttatatgaagatgtaaaaacaattttcattga 44442197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 87 - 188
Target Start/End: Complemental strand, 44804062 - 44803961
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||| ||| || ||   |||||| ||||||||||||||||| || ||| || |||||| || | | |||||||||| |||| ||||    
T  44804062 tcacacttattaagaaaattaacacttagtgatttgaggtataattttttgtgttctccttggaataagtttaatggaaagatgtaaaaataattctcat 44803963  T
Q  187 tg 188  Q
    ||    
T  44803962 tg 44803961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 93 - 181
Target Start/End: Complemental strand, 8784553 - 8784465
Alignment:
Q  93 ttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaatt 181  Q
    |||||||||||||||| || ||   |||||| ||||||||||||||||| |  |||||| |||||| || | | |||||||||| ||||    
T  8784553 ttattaagaaaactaacacttagtgatttgaggtataattttttgtgttcttcttgaaataagtttcatggaaagatgtaaaaataatt 8784465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 87 - 187
Target Start/End: Complemental strand, 35832576 - 35832476
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||||||| || ||   |||||| ||||||||||||||||| || ||| || || ||| || | | |||||||||| |||| ||||    
T  35832576 tcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaataaatttcatggaaagatgtaaaaataattctcat 35832477  T
Q  187 t 187  Q
    |    
T  35832476 t 35832476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 107; Significance: 2e-53; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 87 - 327
Target Start/End: Complemental strand, 21542586 - 21542346
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||||||||||||||||||||| |||||| |||||||||||||||||| |||||||||||||||| ||||||||||||||||| ||    
T  21542586 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaaaaacaatttttat 21542487  T
Q  187 tgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaacnnnnnnnntattgaaaaagataaaa 286  Q
    || |||||| |||||       |||||||   ||||||||||||||||||| ||||||||  |||||||||||          ||||| |||||||||||    
T  21542486 tggctattggttatggaaaaaatgaaagaaaaagaaaattgaatgtaatttgcatttaatattatgagaataacaaaaaaaaatattggaaaagataaaa 21542387  T
Q  287 gtttgtcnnnnnnncttatattttgggacaaagaaaatgtg 327  Q
    |||||||       |||||||||||||||||||||||||||    
T  21542386 gtttgtcttttttgcttatattttgggacaaagaaaatgtg 21542346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 93 - 259
Target Start/End: Original strand, 11082244 - 11082410
Alignment:
Q  93 ttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattgacta 192  Q
    |||||||||||||||||||||||||||||| |||||| |||||||||||||||||| |||||||||||||||  |||||||||||||||||||||| |||    
T  11082244 ttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttatagggagatgtaaaaacaattttcattggcta 11082343  T
Q  193 ttgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataa 259  Q
    ||| |||||       |||||||  |||||||||||||||||||| ||||||||| |||||||||||    
T  11082344 ttggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttatgagaataa 11082410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 87 - 327
Target Start/End: Original strand, 35129047 - 35129288
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaa-aaacaattttca 185  Q
    ||||| |||||||||||||||||||||||||||||| |||||| |||||||||||||||||| |||||||||||||||| ||||||| ||||||||||||    
T  35129047 tcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttggaaaaagttttataggaagatgtaataaacaattttca 35129146  T
Q  186 ttgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaacnnnnnnnntattgaaaaagataaa 285  Q
    |||  ||||| |||||       |||||||  |||||||||||||||||||| ||||||||| || ||||||||          | ||| ||||||||||    
T  35129147 ttggttattggttatggaaaaaatgaaagaaagagaaaattgaatgtaatttgcatttaattttacgagaataacaaaaaaaaatcttggaaaagataaa 35129246  T
Q  286 agtttgtcnnnnnnncttatattttgggacaaagaaaatgtg 327  Q
    ||||||||       ||| |||||||||||||||||||||||    
T  35129247 agtttgtcttttttgcttgtattttgggacaaagaaaatgtg 35129288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 91 - 327
Target Start/End: Original strand, 3095717 - 3095954
Alignment:
Q  91 atttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattgac 190  Q
    ||||||||||||||||||| ||||| |||||| |||||| ||||||||||||||||||  ||||||||||||||| |||||||||||||||||||||| |    
T  3095717 atttattaagaaaactaaagcataaaaatttggagtatagttttttgtgttttctttg-gaaaagttttataggaagatgtaaaaacaattttcattggc 3095815  T
Q  191 tattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaata--aacnnnnnnnntattgaaaaagataaaagt 288  Q
    |||||||||||       ||||| |  |||||||||||||||||||| ||||||||| ||||||||||  ||         | ||| |||||||||||||    
T  3095816 tattgattatggaaaaaatgaaataaagagaaaattgaatgtaatttgcatttaattttatgagaataacaaaaaaaaaaatcttggaaaagataaaagt 3095915  T
Q  289 ttgtcnnnnnnncttatattttgggacaaagaaaatgtg 327  Q
    |||||       |||||||||||||||||||||||||||    
T  3095916 ttgtcttttttgcttatattttgggacaaagaaaatgtg 3095954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 87 - 259
Target Start/End: Original strand, 34177634 - 34177806
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||| ||||||||||||||||| | |||| |||||||||||||||||| |||||  ||||||||  ||||||||||||||||||||    
T  34177634 tcacacttattaagaaaattaaaacataagaatttggaatatagttttttgtgttttctttggaaaaaaatttatagggagatgtaaaaacaattttcat 34177733  T
Q  187 tgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataa 259  Q
    || |||||| |||||       |||||||  |||| ||||||||||||||| ||||||||| |||||||||||    
T  34177734 tggctattggttatggaaaaaatgaaagaaagagataattgaatgtaatttgcatttaattttatgagaataa 34177806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 87 - 259
Target Start/End: Original strand, 7274868 - 7275040
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||||||||||||||||||||| || ||| |||||||| ||||||||| || |||||| || ||| ||||||||||||||||||||    
T  7274868 tcacacttattaagaaaactaaaacataagaatttgtagcatagttttttgtattttctttggaataagtttcatgggaagatgtaaaaacaattttcat 7274967  T
Q  187 tgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataa 259  Q
    || |||||| |||||       |||||||| ||||||||| ||||||||||  ||||||||  ||||||||||    
T  7274968 tggctattggttatggaaaaaatgaaagagagagaaaattaaatgtaatttgtatttaatttcatgagaataa 7275040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 91 - 260
Target Start/End: Original strand, 30794189 - 30794358
Alignment:
Q  91 atttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattgac 190  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| |||||| |||| || ||||||||||||| |||||||||||| ||||||||| |    
T  30794189 atttattaagaaaactaaaatataagaatttgaagtataattttttatgttttatttggaataagttttataggaagatgtaaaaacatttttcattggc 30794288  T
Q  191 tattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaa 260  Q
    ||||| | |||       |  ||||| ||||||||| ||| |||||| |||||||||  |||||||||||    
T  30794289 tattggtgatggagaaaatagaagagagagaaaattaaatctaatttgcatttaatttcatgagaataaa 30794358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 87 - 261
Target Start/End: Original strand, 12461422 - 12461596
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaag-ttttataggatgatgtaaaaacaattttca 185  Q
    ||||||||||||||||||||||||||| |||||||| | |||| |||||| | |||||||||||| ||| |||||||| | |||||||||||||||||||    
T  12461422 tcacatttattaagaaaactaaaacatgagaatttggaatatagtttttt-tattttctttgaaataagtttttatagaaagatgtaaaaacaattttca 12461520  T
Q  186 ttgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaac 261  Q
    ||| |||||| |||||       |  |||||  |||||||||||||||||||  ||||||||  ||||||||||||    
T  12461521 ttggctattggttatggagaaaatagaagagacagaaaattgaatgtaatttggatttaatttcatgagaataaac 12461596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 87 - 201
Target Start/End: Original strand, 14573121 - 14573234
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    |||||||||||||||||||||||| ||| ||||||| |||||||||||| || |||||||||||| |||| |||| |||||||||||||| |||||||||    
T  14573121 tcacatttattaagaaaactaaaatatatgaatttggagtataattttt-gtattttctttgaaataagtattatgggatgatgtaaaaataattttcat 14573219  T
Q  187 tgactattgattatg 201  Q
    ||  | |||||||||    
T  14573220 tgtttgttgattatg 14573234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 87 - 154
Target Start/End: Complemental strand, 9428913 - 9428846
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaa 154  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| ||||||    
T  9428913 tcacatttattaataaaactaaaacataagaatttgaagtataattttttgtgttttttttaaaaaaa 9428846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 125 - 261
Target Start/End: Complemental strand, 31107320 - 31107185
Alignment:
Q  125 gtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattgactattgattatgnnnnnnntgaaagagggagaaaa 224  Q
    ||||| ||||||||||||||||||||||||  |||||| ||  |||||||||  ||||| ||||||||||||||||        ||||||||  || |||    
T  31107320 gtatagttttttgtgttttctttgaaaaaaaatttataagaaaatgtaaaaatgatttttattgactattgattatagaaaaaatgaaagagaaag-aaa 31107222  T
Q  225 ttgaatgtaattttcatttaattctatgagaataaac 261  Q
    ||||||||||||| ||||||||| ||| |||||||||    
T  31107221 ttgaatgtaatttgcatttaattttataagaataaac 31107185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 87 - 189
Target Start/End: Complemental strand, 15830861 - 15830759
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||||||||||| ||||||||||||||| | |||  |  ||||||||||||||| | ||| ||| |||||| |||||| |||||||||| |||||||||    
T  15830861 tcacatttattaaaaaaactaaaacataatagtttctaacataattttttgtgttatttttaaaataagtttaataggaagatgtaaaaaaaattttcat 15830762  T
Q  187 tga 189  Q
    |||    
T  15830761 tga 15830759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 87 - 188
Target Start/End: Complemental strand, 4032156 - 4032052
Alignment:
Q  87 tcacatttattaagaaaactaaaacata--agaa-tttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaatttt 183  Q
    ||||| ||||||||||||||||||||||  || | |||| |  ||| ||||||||||| ||||||||| ||||||||| ||| |||||||||||||||||    
T  4032156 tcacacttattaagaaaactaaaacatagtagtagtttgtaacatagttttttgtgttatctttgaaataagttttatcggaagatgtaaaaacaatttt 4032057  T
Q  184 cattg 188  Q
    |||||    
T  4032056 cattg 4032052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 131 - 188
Target Start/End: Complemental strand, 16524501 - 16524444
Alignment:
Q  131 ttttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattg 188  Q
    ||||||||||| ||||||||| ||||||||||||| ||||||||||||||||||||||    
T  16524501 ttttttgtgttatctttgaaataagttttataggaagatgtaaaaacaattttcattg 16524444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 87 - 261
Target Start/End: Original strand, 17751737 - 17751911
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||| ||||| ||||||||||| |||||| |||||||||||||||||  |  ||||||| |   |  ||||||||||| |  ||||    
T  17751737 tcacacttattaagaaaattaaaatataagaatttggagtatagttttttgtgttttctttagattaagtttttttaaaaaatgtaaaaacagtgctcat 17751836  T
Q  187 tgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaac 261  Q
    || ||||||||||||       || ||||| || ||||||||||||||||| |||||| ||  || |||||||||    
T  17751837 tggctattgattatggagaaaatggaagagagaaaaaattgaatgtaatttgcatttagtttcataagaataaac 17751911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 87 - 183
Target Start/End: Original strand, 5822027 - 5822123
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaatttt 183  Q
    ||||| |||||||||||||||||| || | | |||| |||||||||| ||||||| |||||| || |||||| |||| | |||||||||||||||||    
T  5822027 tcacacttattaagaaaactaaaatattatagtttgtagtataatttcttgtgttatctttggaataagtttcatagaaagatgtaaaaacaatttt 5822123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 131 - 188
Target Start/End: Complemental strand, 4988065 - 4988008
Alignment:
Q  131 ttttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattg 188  Q
    ||||||||||| ||||||||| ||||||||||||| |||||||||| |||||||||||    
T  4988065 ttttttgtgttatctttgaaataagttttataggaagatgtaaaaataattttcattg 4988008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 131 - 188
Target Start/End: Original strand, 16013469 - 16013526
Alignment:
Q  131 ttttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattg 188  Q
    |||||||| || ||||||||| ||||||||||||| ||||||||||||||||||||||    
T  16013469 ttttttgtattatctttgaaataagttttataggaagatgtaaaaacaattttcattg 16013526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 94 - 188
Target Start/End: Complemental strand, 17598450 - 17598356
Alignment:
Q  94 tattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattg 188  Q
    ||||||||||| ||| || |||  |||||| ||||||||||||||||| |||||| || || |||||| | | |||||||||| |||| ||||||    
T  17598450 tattaagaaaattaacacttaatgatttgaggtataattttttgtgttctctttggaataaattttatggaaagatgtaaaaataattctcattg 17598356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 87 - 197
Target Start/End: Complemental strand, 21964121 - 21964011
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| ||| ||| ||||||||||||||  |||| ||  |||||||||||||||| || || ||| ||||||||| | | |||||||||| |||||| ||    
T  21964121 tcacacttactaataaaactaaaacatagtaattagagatataattttttgtgttctccttaaaataagttttatggaaagatgtaaaaataatttttat 21964022  T
Q  187 tgactattgat 197  Q
    ||  |||||||    
T  21964021 tggttattgat 21964011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 87 - 188
Target Start/End: Original strand, 5881746 - 5881846
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||||||||||||||| |||||| || | | |||| |||||||||| || |||| |||||| |  |||||| |||| | ||||||||||||||||| ||    
T  5881746 tcacatttattaagaaa-ctaaaatattatagtttgcagtataatttcttctgttatctttggactaagtttcatagaaagatgtaaaaacaattttaat 5881844  T
Q  187 tg 188  Q
    ||    
T  5881845 tg 5881846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 87 - 188
Target Start/End: Complemental strand, 10228076 - 10227975
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||||||| || ||   |||||| ||||||||||| ||||| || |||||| |||||| || | | |||||||||| |||| ||||    
T  10228076 tcacacttattaagaaaactaacacttagtgatttgaggtataatttttagtgttctccttgaaataagtttcatcgaaagatgtaaaaataattctcat 10227977  T
Q  187 tg 188  Q
    ||    
T  10227976 tg 10227975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 134 - 186
Target Start/End: Complemental strand, 3888546 - 3888494
Alignment:
Q  134 tttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    |||||||| | ||||||| ||||||||||||| |||||| |||||||||||||    
T  3888546 tttgtgttatatttgaaataagttttataggaagatgtagaaacaattttcat 3888494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 153 - 188
Target Start/End: Original strand, 5300659 - 5300694
Alignment:
Q  153 aagttttataggatgatgtaaaaacaattttcattg 188  Q
    ||||||||||||| ||||||||||||||||||||||    
T  5300659 aagttttataggaagatgtaaaaacaattttcattg 5300694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 118 - 188
Target Start/End: Complemental strand, 30949268 - 30949198
Alignment:
Q  118 atttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattg 188  Q
    |||||| ||||||||||||||||| || |||||| |||||| || | | |||||||||| |||| ||||||    
T  30949268 atttgaggtataattttttgtgttctccttgaaataagtttcatggaaagatgtaaaaataattctcattg 30949198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 87 - 188
Target Start/End: Complemental strand, 374263 - 374162
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||||||||||| |||||||| || ||   |||||| ||||||||||||||||| || ||  || |||||| || | | |||||| ||| |||||||||    
T  374263 tcacatttattaaaaaaactaatacttagttatttgaggtataattttttgtgttctccttagaataagtttcatggaaagatgtataaataattttcat 374164  T
Q  187 tg 188  Q
    ||    
T  374163 tg 374162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 87 - 176
Target Start/End: Original strand, 5121449 - 5121538
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaa 176  Q
    ||||| |||||||||||||||| || |||  |||||| ||||| ||||||||||| || || ||| |||||| || | | ||||||||||    
T  5121449 tcacacttattaagaaaactaacacttaatgatttgaggtatagttttttgtgttctccttaaaataagtttcatggaaagatgtaaaaa 5121538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 87 - 187
Target Start/End: Original strand, 17721802 - 17721902
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||||||| || ||   |||||| ||||||||||||||||| || ||| || |||||| || | |  ||||||||| |||| ||||    
T  17721802 tcacacttattaagaaaactaatacttagtgatttgaggtataattttttgtgttctccttggaataagtttcatggaaacatgtaaaaataattctcat 17721901  T
Q  187 t 187  Q
    |    
T  17721902 t 17721902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 87 - 187
Target Start/End: Complemental strand, 30766610 - 30766510
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||||||| || ||   ||||||  |||||||||||||||| || ||| || |||||| || | | |||||||||| |||| ||||    
T  30766610 tcacacttattaagaaaactaacacttagtgatttgagatataattttttgtgttctccttggaataagtttcatggaaagatgtaaaaataattctcat 30766511  T
Q  187 t 187  Q
    |    
T  30766510 t 30766510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 87 - 187
Target Start/End: Original strand, 32882684 - 32882784
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| ||||||||||||| |||||||   | ||||| ||||||||||||||||| |   | ||| |||||| || | | ||||||||||||||| ||||    
T  32882684 tcacacttattaagaaaacaaaaacattgtagtttgaggtataattttttgtgttcttcataaaataagtttcatggaaagatgtaaaaacaattctcat 32882783  T
Q  187 t 187  Q
    |    
T  32882784 t 32882784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0442 (Bit Score: 100; Significance: 3e-49; HSPs: 1)
Name: scaffold0442
Description:

Target: scaffold0442; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 93 - 261
Target Start/End: Complemental strand, 10207 - 10039
Alignment:
Q  93 ttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattgacta 192  Q
    |||||||||||| ||||||||||||||||| | | || |||||||||||||||||  |||||||||||||||| ||||||||||||||||||||||||||    
T  10207 ttattaagaaaattaaaacataagaatttggaatgtagttttttgtgttttctttagaaaaagttttataggaagatgtaaaaacaattttcattgacta 10108  T
Q  193 ttgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaac 261  Q
    ||| |||||       |||||||| |||||||||||||||||||| ||||||||| |||||||||||||    
T  10107 ttggttatggaaaaaatgaaagagagagaaaattgaatgtaatttgcatttaattgtatgagaataaac 10039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0300 (Bit Score: 100; Significance: 3e-49; HSPs: 1)
Name: scaffold0300
Description:

Target: scaffold0300; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 87 - 259
Target Start/End: Original strand, 566 - 738
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||||||||||||||||||||| |||||| |||| |||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  566 tcacacttattaagaaaactaaaacataagaatttggagtatagttttatgtgttttctttgaaaaaagttttatagggagatgtaaaaacaattttcat 665  T
Q  187 tgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataa 259  Q
    || |||||| |||||       |||||||  || ||||||||||||||||| ||||||||| |||||||||||    
T  666 tggctattggttatggaaaaaatgaaagaaagataaaattgaatgtaatttgcatttaattttatgagaataa 738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 90; Significance: 3e-43; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 87 - 261
Target Start/End: Original strand, 44764 - 44938
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||||||||||||||||||||||||||| |||||| |||||| |||||||||||||||||| ||||||||||||||||  ||  |||||||||||||||    
T  44764 tcacatttattaagaaaactaaaacataataatttggagtatatttttttgtgttttctttggaaaaagttttataggaatattaaaaaacaattttcat 44863  T
Q  187 tgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaac 261  Q
    || |||||| |||||       |||||||| | ||||||| |||||||||| ||||||||| || ||||||||||    
T  44864 tggctattggttatggaaaaaatgaaagagagggaaaattaaatgtaatttgcatttaattttacgagaataaac 44938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 88; Significance: 5e-42; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 91 - 324
Target Start/End: Complemental strand, 155024 - 154792
Alignment:
Q  91 atttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattgac 190  Q
    ||||||||||||||||||||||||||||| |||| |||| ||||| || |||||||||||||||||||||||| | |||||||||||||||| ||||| |    
T  155024 atttattaagaaaactaaaacataagaatctgaaatatagttttt-gtattttctttgaaaaaagttttatagaaagatgtaaaaacaatttacattggc 154926  T
Q  191 tattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaacnnnnnnnntattgaaaaagataaaagttt 290  Q
    ||||| |||||       |||||||  ||||||||| |||||||||| ||||||||| ||||||||||||         | |||||||||||||||||||    
T  154925 tattggttatggaaaaaatgaaagatagagaaaatttaatgtaatttgcatttaattttatgagaataaaaaaaaaaaatcttgaaaaagataaaagttt 154826  T
Q  291 gtcnnnnnnncttatattttgggacaaagaaaat 324  Q
     ||       ||||||||||| ||||||||||||    
T  154825 atcttttttacttatattttgagacaaagaaaat 154792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 86; Significance: 8e-41; HSPs: 2)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 87 - 261
Target Start/End: Complemental strand, 1180 - 1006
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||||||||||  |||||||||| |||| |||||| |||||| ||||||||||||| ||| ||||||||||||||| | |||||||||||| |||||||    
T  1180 tcacatttattataaaaactaaaatataaaaatttggagtatagttttttgtgtttttttttaaaaaagttttatagaaagatgtaaaaacagttttcat 1081  T
Q  187 tgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaac 261  Q
    ||| ||||| |||||       |||||||||||||||||| |||||||||| | ||||||| |||||||||||||    
T  1080 tgagtattggttatggaaaaaatgaaagagggagaaaattcaatgtaatttgcgtttaattttatgagaataaac 1006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #2
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 87 - 261
Target Start/End: Complemental strand, 9140 - 8966
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||||||||||  |||||||||| |||| |||||| |||||| ||||||||||||| ||| ||||||||||||||| | |||||||||||| |||||||    
T  9140 tcacatttattataaaaactaaaatataaaaatttggagtatagttttttgtgtttttttttaaaaaagttttatagaaagatgtaaaaacagttttcat 9041  T
Q  187 tgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataaac 261  Q
    ||| ||||| |||||       |||||||||||||||||| |||||||||| | ||||||| |||||||||||||    
T  9040 tgagtattggttatggaaaaaatgaaagagggagaaaattcaatgtaatttgcgtttaattttatgagaataaac 8966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0774 (Bit Score: 84; Significance: 1e-39; HSPs: 1)
Name: scaffold0774
Description:

Target: scaffold0774; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 113 - 261
Target Start/End: Original strand, 3447 - 3595
Alignment:
Q  113 taagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattgactattgattatgnnnnnnntgaa 212  Q
    |||||||||| |||||| |||||||||||||||||  |||||||||||||||| |||||||||| ||||||||||| |||||| |||||       ||||    
T  3447 taagaatttggagtatagttttttgtgttttcttttgaaaaagttttataggaagatgtaaaaataattttcattggctattggttatggaaaaaatgaa 3546  T
Q  213 agagggagaaaattgaatgtaattttcatttaattctatgagaataaac 261  Q
    |||| |||||||||||||||||||| ||||||||| |||||||||||||    
T  3547 agagagagaaaattgaatgtaatttgcatttaattgtatgagaataaac 3595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 70; Significance: 3e-31; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 93 - 259
Target Start/End: Complemental strand, 157956 - 157790
Alignment:
Q  93 ttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattgacta 192  Q
    ||||||||||||||||| |||||||||||| || ||| |||||||||||||||||| || |||||| || ||  |||||||||||||||||||||| | |    
T  157956 ttattaagaaaactaaagcataagaatttgtagcatagttttttgtgttttctttggaataagtttcatggggagatgtaaaaacaattttcattggcaa 157857  T
Q  193 ttgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataa 259  Q
    ||| |||||       | |||||| ||||||||| |||||||||| |||||||||  ||||||||||    
T  157856 ttggttatggaaaaaataaaagagagagaaaattaaatgtaatttgcatttaatttcatgagaataa 157790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 168 - 247
Target Start/End: Original strand, 52676 - 52755
Alignment:
Q  168 atgtaaaaacaattttcattgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaatt 247  Q
    ||||||||||||||||||||||||||||||||||       |  ||||| ||||||||| |||||||||  |||||||||    
T  52676 atgtaaaaacaattttcattgactattgattatggagaaaatagaagagagagaaaattaaatgtaattcgcatttaatt 52755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 51; Significance: 6e-20; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 87 - 189
Target Start/End: Original strand, 5868 - 5970
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||| |||||||||  | |||| | |||| ||||||||||| || |||||| ||||||||||||| |||||||||||||||||| |    
T  5868 tcacacttattaagaaaattaaaacatagtagtttgtaatatagttttttgtgttatcattgaaataagttttataggaagatgtaaaaacaattttcct 5967  T
Q  187 tga 189  Q
    |||    
T  5968 tga 5970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 49; Significance: 9e-19; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 87 - 259
Target Start/End: Original strand, 233480 - 233652
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtg-ttttctttgaaaaaagttttataggatgatgtaaaaacaattttca 185  Q
    |||||||||||||||||||||||| |||||||||| |  |||| || |||||| |||||||| ||| |||||| || ||| ||||||||||| |||||||    
T  233480 tcacatttattaagaaaactaaaatataagaatttaatatatagttatttgtgtttttctttaaaataagtttcatgggaagatgtaaaaac-attttca 233578  T
Q  186 ttgactattgattatgnnnnnnntgaaagagggagaaaattgaatgtaattttcatttaattctatgagaataa 259  Q
    ||| |||| |||||         || ||||| | || ||||||||||||||| |||||||||  ||||||||||    
T  233579 ttggctatggattaaaaagaaaatggaagagagtgataattgaatgtaatttgcatttaatttcatgagaataa 233652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 112 - 260
Target Start/End: Complemental strand, 40321 - 40174
Alignment:
Q  112 ataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattgactattgattatgnnnnnnntga 211  Q
    |||||||||||| |||||  ||||||||||||||||| || || |||||||| | | |||||||||||||||||||| |||||| ||||        ||     
T  40321 ataagaatttga-gtatagctttttgtgttttctttggaataaattttatagaaagttgtaaaaacaattttcattggctattggttatagaaaaaatgg 40223  T
Q  212 aagagggagaaaattgaatgtaattttcatttaattctatgagaataaa 260  Q
    | ||| |||||| ||||||||||||| |||||||||  |||||||||||    
T  40222 atgagagagaaagttgaatgtaatttgcatttaatttcatgagaataaa 40174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0330 (Bit Score: 46; Significance: 6e-17; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 87 - 188
Target Start/End: Complemental strand, 3336 - 3235
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||| |||||||||  | |||| |  ||| ||||||||||| ||||||||| ||||||||||||| ||| |||||||||||| |||    
T  3336 tcacacttattaagaaaattaaaacatagtagtttgtaacatagttttttgtgttatctttgaaataagttttataggaagatctaaaaacaatttccat 3237  T
Q  187 tg 188  Q
    ||    
T  3236 tg 3235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1786 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold1786
Description:

Target: scaffold1786; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 96 - 201
Target Start/End: Complemental strand, 997 - 901
Alignment:
Q  96 ttaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcattgactattg 195  Q
    |||| |||| ||||||||||||||||||||||||         |||||||||| || ||||||||||| | ||| |||||| ||||||||||||||||||    
T  997 ttaaaaaaattaaaacataagaatttgaagtata---------gttttctttggaataagttttatagaaagatataaaaataattttcattgactattg 907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0495 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0495
Description:

Target: scaffold0495; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 87 - 188
Target Start/End: Complemental strand, 4794 - 4693
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||||||| || ||   |||||| ||||||||||| ||||| || |||||| |||||| || | | |||||||||| |||| ||||    
T  4794 tcacacttattaagaaaactaacacttagtgatttgaggtataatttttagtgttctccttgaaataagtttcatcgaaagatgtaaaaataattctcat 4695  T
Q  187 tg 188  Q
    ||    
T  4694 tg 4693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 87 - 188
Target Start/End: Original strand, 160912 - 161013
Alignment:
Q  87 tcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgttttctttgaaaaaagttttataggatgatgtaaaaacaattttcat 186  Q
    ||||| |||||||||||| |||||||||  | |||| |  ||| ||| ||||||| || |||||| |||||| |||| | | ||||||||||||||||||    
T  160912 tcacacttattaagaaaattaaaacatagtagtttgcaacatagtttcttgtgttatccttgaaataagtttgatagaaagttgtaaaaacaattttcat 161011  T
Q  187 tg 188  Q
    ||    
T  161012 tg 161013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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