View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3439_low_10 (Length: 430)

Name: NF3439_low_10
Description: NF3439
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3439_low_10
NF3439_low_10
[»] chr2 (65 HSPs)
chr2 (6-415)||(29574231-29574639)
chr2 (6-139)||(24461532-24461665)
chr2 (8-139)||(10237094-10237225)
chr2 (8-139)||(37994375-37994506)
chr2 (6-139)||(17249025-17249158)
chr2 (8-135)||(3309036-3309163)
chr2 (8-138)||(1421767-1421897)
chr2 (6-125)||(12647004-12647120)
chr2 (20-139)||(7646581-7646700)
chr2 (8-139)||(33585613-33585744)
chr2 (6-139)||(32448494-32448630)
chr2 (8-139)||(4778844-4778975)
chr2 (8-139)||(14955620-14955751)
chr2 (8-139)||(38445257-38445388)
chr2 (16-139)||(4904023-4904146)
chr2 (8-138)||(27097286-27097415)
chr2 (6-139)||(37416799-37416932)
chr2 (6-138)||(10929754-10929886)
chr2 (20-139)||(18763571-18763690)
chr2 (8-139)||(25508946-25509077)
chr2 (8-139)||(31128663-31128789)
chr2 (8-139)||(31788547-31788678)
chr2 (8-139)||(36691965-36692096)
chr2 (17-139)||(9169136-9169258)
chr2 (8-139)||(17994604-17994739)
chr2 (8-139)||(29279448-29279579)
chr2 (8-127)||(41694712-41694831)
chr2 (8-138)||(7677752-7677882)
chr2 (9-139)||(8809372-8809501)
chr2 (6-124)||(23933512-23933630)
chr2 (8-139)||(1415648-1415779)
chr2 (8-138)||(19595779-19595912)
chr2 (8-131)||(31210490-31210616)
chr2 (17-139)||(4041472-4041594)
chr2 (8-139)||(30399907-30400044)
chr2 (6-139)||(16376028-16376161)
chr2 (38-139)||(18107628-18107729)
chr2 (8-139)||(20046939-20047072)
chr2 (6-139)||(28533832-28533965)
chr2 (30-139)||(37876484-37876593)
chr2 (56-135)||(6358763-6358842)
chr2 (8-139)||(33923796-33923927)
chr2 (30-139)||(11985111-11985220)
chr2 (8-136)||(19062228-19062361)
chr2 (8-139)||(32678968-32679100)
chr2 (8-139)||(32913331-32913464)
chr2 (8-135)||(41431119-41431248)
chr2 (8-139)||(29173595-29173729)
chr2 (9-139)||(38575342-38575474)
chr2 (8-139)||(43396996-43397128)
chr2 (68-139)||(12554059-12554130)
chr2 (8-135)||(12677333-12677459)
chr2 (8-137)||(45128295-45128426)
chr2 (38-139)||(4100458-4100557)
chr2 (8-139)||(8805957-8806090)
chr2 (6-135)||(14423414-14423547)
chr2 (72-139)||(27249008-27249076)
chr2 (20-59)||(7448350-7448389)
chr2 (30-139)||(459132-459242)
chr2 (30-139)||(5427747-5427856)
chr2 (39-92)||(21612360-21612413)
chr2 (17-102)||(36943036-36943121)
chr2 (72-139)||(7015568-7015636)
chr2 (72-139)||(8971485-8971553)
chr2 (72-139)||(9986199-9986267)
[»] chr1 (76 HSPs)
chr1 (6-139)||(32679018-32679151)
chr1 (6-139)||(47132985-47133118)
chr1 (6-139)||(24583032-24583165)
chr1 (8-139)||(21947495-21947626)
chr1 (12-139)||(48750273-48750400)
chr1 (6-139)||(44543354-44543487)
chr1 (23-139)||(34412969-34413085)
chr1 (8-139)||(36775587-36775718)
chr1 (17-139)||(45415651-45415773)
chr1 (11-139)||(3228356-3228484)
chr1 (8-139)||(14872723-14872854)
chr1 (8-139)||(35484268-35484399)
chr1 (8-139)||(49626997-49627128)
chr1 (8-139)||(13144689-13144820)
chr1 (11-139)||(10776338-10776466)
chr1 (8-139)||(7337540-7337671)
chr1 (8-139)||(27580005-27580136)
chr1 (8-139)||(44915723-44915854)
chr1 (8-138)||(16262945-16263075)
chr1 (9-139)||(19060994-19061124)
chr1 (9-139)||(31317821-31317951)
chr1 (6-139)||(25564080-25564213)
chr1 (8-139)||(34878155-34878286)
chr1 (20-139)||(4413210-4413329)
chr1 (8-139)||(5983920-5984051)
chr1 (53-139)||(24583275-24583361)
chr1 (19-138)||(7997891-7998012)
chr1 (10-139)||(31984247-31984376)
chr1 (17-138)||(37720027-37720148)
chr1 (8-139)||(50165956-50166089)
chr1 (8-139)||(51868502-51868635)
chr1 (17-139)||(49504472-49504594)
chr1 (10-91)||(15492373-15492454)
chr1 (8-139)||(7836673-7836804)
chr1 (8-139)||(15431543-15431674)
chr1 (8-139)||(23291519-23291650)
chr1 (8-139)||(32395082-32395213)
chr1 (52-139)||(34529202-34529289)
chr1 (34-139)||(41081561-41081667)
chr1 (8-139)||(25406141-25406274)
chr1 (8-139)||(33817025-33817158)
chr1 (8-139)||(33876495-33876628)
chr1 (8-139)||(40880870-40881003)
chr1 (8-89)||(43412458-43412539)
chr1 (47-139)||(16161951-16162043)
chr1 (12-92)||(41994515-41994595)
chr1 (63-138)||(16989510-16989585)
chr1 (8-137)||(28035230-28035361)
chr1 (9-139)||(31919073-31919204)
chr1 (9-134)||(50148462-50148589)
chr1 (8-139)||(7342813-7342946)
chr1 (8-139)||(9919480-9919612)
chr1 (6-99)||(18939401-18939494)
chr1 (8-53)||(24597287-24597332)
chr1 (20-139)||(51871966-51872087)
chr1 (72-139)||(5701415-5701483)
chr1 (8-139)||(11454026-11454161)
chr1 (72-139)||(39927412-39927480)
chr1 (9-135)||(40646766-40646894)
chr1 (62-138)||(51373736-51373812)
chr1 (84-139)||(3871577-3871632)
chr1 (8-139)||(12635254-12635385)
chr1 (8-91)||(13075580-13075663)
chr1 (56-135)||(14489404-14489483)
chr1 (12-75)||(26535437-26535500)
chr1 (41-126)||(40163327-40163414)
chr1 (8-83)||(51916599-51916673)
chr1 (19-139)||(7311963-7312084)
chr1 (8-135)||(19723404-19723533)
chr1 (8-139)||(45805686-45805818)
chr1 (62-139)||(50377461-50377538)
chr1 (39-136)||(50616555-50616652)
chr1 (39-136)||(50624382-50624479)
chr1 (72-139)||(27872893-27872961)
chr1 (72-139)||(31836990-31837058)
chr1 (17-53)||(35462012-35462048)
[»] scaffold0009 (1 HSPs)
scaffold0009 (6-139)||(57965-58098)
[»] chr3 (83 HSPs)
chr3 (6-139)||(50194212-50194345)
chr3 (8-139)||(51923807-51923938)
chr3 (8-139)||(51303520-51303651)
chr3 (6-139)||(628800-628933)
chr3 (6-139)||(53807735-53807868)
chr3 (8-139)||(4821887-4822017)
chr3 (8-139)||(8914792-8914923)
chr3 (8-139)||(35175484-35175615)
chr3 (17-139)||(40487414-40487536)
chr3 (39-139)||(12946844-12946944)
chr3 (8-139)||(21289691-21289822)
chr3 (8-135)||(45568326-45568453)
chr3 (8-139)||(16235506-16235637)
chr3 (8-139)||(29922137-29922268)
chr3 (8-139)||(29971290-29971421)
chr3 (8-139)||(42460829-42460960)
chr3 (8-138)||(7546695-7546825)
chr3 (8-137)||(23799789-23799918)
chr3 (8-139)||(7448791-7448922)
chr3 (8-139)||(7456933-7457064)
chr3 (8-139)||(21313116-21313247)
chr3 (20-139)||(21533686-21533805)
chr3 (8-139)||(43488467-43488598)
chr3 (8-138)||(14859570-14859700)
chr3 (30-138)||(4711584-4711692)
chr3 (19-139)||(21431704-21431824)
chr3 (8-139)||(10229556-10229687)
chr3 (8-139)||(33579960-33580091)
chr3 (8-139)||(40556782-40556913)
chr3 (20-139)||(48650611-48650730)
chr3 (8-139)||(52922994-52923125)
chr3 (8-139)||(38859989-38860122)
chr3 (30-139)||(44805131-44805239)
chr3 (8-139)||(10233150-10233281)
chr3 (8-139)||(27706103-27706234)
chr3 (8-138)||(6954574-6954704)
chr3 (8-138)||(9797412-9797542)
chr3 (64-138)||(52115899-52115973)
chr3 (9-139)||(32607554-32607686)
chr3 (32-139)||(9998571-9998678)
chr3 (8-139)||(10108316-10108447)
chr3 (8-139)||(46304397-46304528)
chr3 (6-100)||(53508304-53508398)
chr3 (17-139)||(54149080-54149202)
chr3 (9-140)||(12116183-12116316)
chr3 (8-100)||(36461347-36461439)
chr3 (31-138)||(7792065-7792172)
chr3 (8-139)||(38545879-38546010)
chr3 (17-139)||(3085178-3085300)
chr3 (44-139)||(27856279-27856376)
chr3 (8-139)||(25631383-25631516)
chr3 (62-139)||(37040903-37040979)
chr3 (9-138)||(53099871-53099998)
chr3 (8-139)||(12050525-12050656)
chr3 (8-139)||(32701571-32701702)
chr3 (8-139)||(47041925-47042056)
chr3 (8-139)||(47896232-47896362)
chr3 (6-44)||(12947246-12947284)
chr3 (55-113)||(32246550-32246608)
chr3 (8-141)||(19339256-19339388)
chr3 (20-139)||(44907256-44907377)
chr3 (6-138)||(26739235-26739367)
chr3 (72-139)||(36906271-36906339)
chr3 (56-139)||(7887329-7887411)
chr3 (8-139)||(12149661-12149792)
chr3 (9-92)||(18011101-18011184)
chr3 (68-139)||(20987632-20987703)
chr3 (104-139)||(25849991-25850026)
chr3 (68-139)||(42455697-42455768)
chr3 (77-135)||(43017037-43017095)
chr3 (77-135)||(44959854-44959912)
chr3 (8-98)||(45424878-45424968)
chr3 (33-139)||(46220768-46220874)
chr3 (50-100)||(51487217-51487267)
chr3 (64-139)||(4169929-4170001)
chr3 (8-139)||(25162520-25162653)
chr3 (8-139)||(29503545-29503678)
chr3 (8-135)||(39917259-39917388)
chr3 (12-109)||(48199861-48199958)
chr3 (8-139)||(50611275-50611408)
chr3 (72-135)||(38854897-38854961)
chr3 (8-139)||(46178653-46178785)
chr3 (30-139)||(49552081-49552192)
[»] chr4 (83 HSPs)
chr4 (8-139)||(36204256-36204387)
chr4 (6-122)||(52944410-52944526)
chr4 (8-139)||(21686119-21686250)
chr4 (8-139)||(36161812-36161943)
chr4 (6-139)||(47320289-47320422)
chr4 (8-139)||(28857503-28857633)
chr4 (8-139)||(31891164-31891295)
chr4 (17-139)||(2520889-2521011)
chr4 (6-139)||(22300948-22301082)
chr4 (8-139)||(19853389-19853520)
chr4 (8-138)||(18935883-18936013)
chr4 (8-139)||(22611284-22611415)
chr4 (8-139)||(36194810-36194940)
chr4 (8-134)||(53811129-53811255)
chr4 (8-101)||(10258811-10258904)
chr4 (8-139)||(27652045-27652175)
chr4 (8-139)||(29960826-29960957)
chr4 (8-139)||(9714013-9714142)
chr4 (31-139)||(51888088-51888196)
chr4 (8-138)||(35348408-35348538)
chr4 (17-139)||(43853553-43853675)
chr4 (8-141)||(32766615-32766748)
chr4 (19-139)||(13634227-13634347)
chr4 (17-139)||(43510306-43510428)
chr4 (9-125)||(6155114-6155233)
chr4 (53-137)||(52933828-52933912)
chr4 (8-136)||(56040526-56040654)
chr4 (55-138)||(37465630-37465713)
chr4 (8-138)||(42032407-42032536)
chr4 (8-139)||(45418613-45418746)
chr4 (30-139)||(17949201-17949310)
chr4 (30-139)||(17953053-17953162)
chr4 (8-139)||(44947511-44947644)
chr4 (11-139)||(21662541-21662669)
chr4 (11-139)||(21671305-21671433)
chr4 (8-139)||(10496436-10496567)
chr4 (8-139)||(24098946-24099075)
chr4 (8-139)||(26633548-26633679)
chr4 (8-139)||(33921155-33921286)
chr4 (8-139)||(53444219-53444350)
chr4 (12-139)||(54021965-54022091)
chr4 (8-102)||(4142666-4142760)
chr4 (8-138)||(9048765-9048895)
chr4 (9-139)||(9145768-9145898)
chr4 (6-100)||(33332485-33332579)
chr4 (8-138)||(36184632-36184762)
chr4 (8-139)||(45227898-45228031)
chr4 (8-139)||(49410322-49410455)
chr4 (56-139)||(1621388-1621469)
chr4 (72-139)||(18138771-18138839)
chr4 (8-100)||(48351102-48351194)
chr4 (72-139)||(49125984-49126052)
chr4 (9-139)||(53616507-53616639)
chr4 (17-139)||(7008866-7008986)
chr4 (77-139)||(11299887-11299949)
chr4 (6-139)||(2069458-2069590)
chr4 (8-139)||(4643957-4644090)
chr4 (6-139)||(12199571-12199703)
chr4 (20-136)||(49680649-49680766)
chr4 (62-135)||(52978899-52978972)
chr4 (9-139)||(9284011-9284143)
chr4 (8-139)||(35964833-35964965)
chr4 (72-139)||(47417826-47417894)
chr4 (95-138)||(9643564-9643607)
chr4 (64-139)||(44596817-44596892)
chr4 (20-139)||(48257509-48257628)
chr4 (17-100)||(55228088-55228171)
chr4 (30-139)||(56199217-56199328)
chr4 (8-134)||(8670586-8670712)
chr4 (20-139)||(1532019-1532140)
chr4 (8-139)||(6972909-6973042)
chr4 (8-139)||(9528734-9528867)
chr4 (8-139)||(10389611-10389744)
chr4 (78-139)||(12493464-12493525)
chr4 (20-139)||(25273994-25274115)
chr4 (8-139)||(34024295-34024428)
chr4 (6-91)||(38166155-38166240)
chr4 (8-139)||(38706567-38706700)
chr4 (8-139)||(43153871-43154004)
chr4 (20-139)||(51318096-51318217)
chr4 (72-139)||(27593686-27593754)
chr4 (20-120)||(31359642-31359742)
chr4 (9-139)||(50766369-50766501)
[»] chr5 (51 HSPs)
chr5 (8-139)||(10332424-10332556)
chr5 (11-139)||(14211310-14211438)
chr5 (8-139)||(28540783-28540914)
chr5 (8-139)||(39567350-39567481)
chr5 (8-139)||(2979183-2979314)
chr5 (6-139)||(8088089-8088222)
chr5 (8-139)||(38597877-38598008)
chr5 (8-138)||(13007309-13007439)
chr5 (6-138)||(35920874-35921006)
chr5 (8-139)||(9113602-9113733)
chr5 (8-139)||(24229661-24229792)
chr5 (8-139)||(34945473-34945604)
chr5 (8-139)||(10722841-10722972)
chr5 (8-139)||(19103344-19103475)
chr5 (8-139)||(26877986-26878116)
chr5 (8-139)||(41630582-41630713)
chr5 (17-139)||(38007447-38007568)
chr5 (8-139)||(15571566-15571698)
chr5 (8-139)||(11976812-11976943)
chr5 (8-139)||(14726338-14726469)
chr5 (8-138)||(25980238-25980367)
chr5 (8-139)||(4954081-4954214)
chr5 (8-139)||(7150192-7150325)
chr5 (8-139)||(6216978-6217110)
chr5 (63-139)||(8096375-8096451)
chr5 (8-139)||(13422013-13422144)
chr5 (8-139)||(31391630-31391761)
chr5 (8-139)||(6012015-6012146)
chr5 (32-139)||(26825534-26825641)
chr5 (19-139)||(7247059-7247181)
chr5 (19-139)||(43148827-43148949)
chr5 (11-52)||(8984919-8984960)
chr5 (8-139)||(19280803-19280935)
chr5 (83-139)||(8984862-8984918)
chr5 (9-121)||(26578342-26578456)
chr5 (30-133)||(781499-781604)
chr5 (19-139)||(7241883-7242006)
chr5 (8-135)||(7930257-7930384)
chr5 (72-139)||(28235739-28235809)
chr5 (8-102)||(1409578-1409672)
chr5 (12-138)||(7036303-7036428)
chr5 (84-138)||(34881884-34881938)
chr5 (30-139)||(14082273-14082382)
chr5 (8-139)||(16981379-16981514)
chr5 (30-139)||(19121014-19121123)
chr5 (8-139)||(19259669-19259802)
chr5 (8-139)||(21060140-21060273)
chr5 (84-141)||(43008170-43008227)
chr5 (72-139)||(15571061-15571129)
chr5 (72-139)||(20257553-20257621)
chr5 (8-138)||(42579977-42580109)
[»] chr8 (67 HSPs)
chr8 (8-139)||(42046304-42046435)
chr8 (6-139)||(15344389-15344522)
chr8 (6-139)||(15433454-15433587)
chr8 (6-139)||(15524758-15524891)
chr8 (8-135)||(7198074-7198201)
chr8 (8-139)||(14585760-14585891)
chr8 (8-138)||(43833872-43834002)
chr8 (30-139)||(41896622-41896731)
chr8 (8-139)||(18890574-18890705)
chr8 (8-139)||(37971366-37971497)
chr8 (8-102)||(39657537-39657631)
chr8 (8-139)||(1236572-1236703)
chr8 (8-139)||(16928632-16928763)
chr8 (8-139)||(31013483-31013614)
chr8 (17-139)||(7677158-7677280)
chr8 (3-101)||(14916101-14916198)
chr8 (20-139)||(7883116-7883235)
chr8 (8-139)||(23230726-23230857)
chr8 (8-139)||(27110340-27110471)
chr8 (8-135)||(3240463-3240590)
chr8 (8-121)||(20553134-20553247)
chr8 (6-139)||(471039-471174)
chr8 (8-139)||(24099131-24099256)
chr8 (8-98)||(8443427-8443517)
chr8 (8-125)||(1239286-1239403)
chr8 (8-121)||(20559637-20559750)
chr8 (8-121)||(20571199-20571312)
chr8 (6-139)||(29617149-29617282)
chr8 (8-139)||(8867888-8868022)
chr8 (8-136)||(10377772-10377900)
chr8 (8-139)||(45445686-45445817)
chr8 (12-138)||(3673528-3673654)
chr8 (17-139)||(28897801-28897923)
chr8 (6-139)||(5046834-5046967)
chr8 (8-139)||(16247098-16247229)
chr8 (9-138)||(24186537-24186666)
chr8 (8-139)||(43135436-43135569)
chr8 (9-139)||(4809059-4809191)
chr8 (9-139)||(11464266-11464398)
chr8 (8-139)||(21237873-21238002)
chr8 (9-139)||(23851351-23851483)
chr8 (20-139)||(25190940-25191059)
chr8 (8-139)||(40618948-40619079)
chr8 (17-139)||(9637284-9637406)
chr8 (34-138)||(18846338-18846446)
chr8 (17-139)||(40211177-40211299)
chr8 (8-136)||(17693491-17693620)
chr8 (6-139)||(33347396-33347529)
chr8 (8-100)||(5333512-5333604)
chr8 (72-139)||(9498456-9498524)
chr8 (31-139)||(39646063-39646169)
chr8 (6-53)||(8981244-8981291)
chr8 (63-138)||(27498242-27498317)
chr8 (8-131)||(29939383-29939506)
chr8 (68-139)||(30568196-30568267)
chr8 (9-138)||(43889982-43890113)
chr8 (8-139)||(32724338-32724471)
chr8 (19-139)||(33298960-33299081)
chr8 (8-139)||(42447884-42448017)
chr8 (20-94)||(14544823-14544897)
chr8 (8-135)||(26469029-26469152)
chr8 (6-75)||(10331172-10331241)
chr8 (8-100)||(28086726-28086819)
chr8 (8-139)||(29777313-29777446)
chr8 (72-139)||(2656029-2656097)
chr8 (72-139)||(11267167-11267235)
chr8 (72-139)||(16794450-16794518)
[»] chr6 (53 HSPs)
chr6 (8-139)||(546113-546244)
chr6 (8-139)||(3913451-3913582)
chr6 (8-139)||(14801909-14802040)
chr6 (8-139)||(30493614-30493745)
chr6 (8-138)||(8102808-8102938)
chr6 (8-139)||(31296902-31297033)
chr6 (6-139)||(7976064-7976197)
chr6 (8-136)||(12170550-12170678)
chr6 (8-139)||(606286-606417)
chr6 (8-105)||(32191641-32191738)
chr6 (8-139)||(32327097-32327225)
chr6 (8-139)||(127751-127880)
chr6 (6-141)||(29743077-29743215)
chr6 (17-137)||(34018651-34018771)
chr6 (9-100)||(1523491-1523582)
chr6 (8-139)||(23128700-23128831)
chr6 (8-139)||(29255323-29255454)
chr6 (8-139)||(30776745-30776876)
chr6 (6-84)||(1933624-1933702)
chr6 (8-139)||(35001677-35001810)
chr6 (8-139)||(20225933-20226064)
chr6 (8-139)||(22119917-22120048)
chr6 (8-139)||(33053045-33053176)
chr6 (6-100)||(31852109-31852203)
chr6 (6-139)||(27097519-27097652)
chr6 (8-139)||(679191-679321)
chr6 (8-138)||(26588350-26588480)
chr6 (8-139)||(16419245-16419378)
chr6 (6-139)||(28981257-28981390)
chr6 (8-139)||(29319754-29319886)
chr6 (19-139)||(23947174-23947297)
chr6 (8-131)||(34185578-34185701)
chr6 (9-139)||(9380106-9380236)
chr6 (8-138)||(30608393-30608523)
chr6 (8-101)||(3355199-3355292)
chr6 (8-139)||(10228766-10228899)
chr6 (31-139)||(67878-67986)
chr6 (9-139)||(7880959-7881091)
chr6 (72-139)||(17334905-17334973)
chr6 (9-139)||(8497055-8497188)
chr6 (77-139)||(9341528-9341590)
chr6 (9-139)||(4088548-4088680)
chr6 (72-139)||(25064388-25064456)
chr6 (30-139)||(16892673-16892784)
chr6 (80-139)||(21426563-21426622)
chr6 (8-135)||(30894682-30894808)
chr6 (32-98)||(4010430-4010496)
chr6 (8-139)||(12653031-12653164)
chr6 (8-139)||(17237143-17237276)
chr6 (8-135)||(33110698-33110827)
chr6 (8-139)||(33740435-33740568)
chr6 (20-92)||(528274-528346)
chr6 (72-139)||(8027975-8028043)
[»] scaffold0127 (1 HSPs)
scaffold0127 (8-139)||(15573-15704)
[»] scaffold0088 (1 HSPs)
scaffold0088 (8-139)||(50857-50988)
[»] chr7 (55 HSPs)
chr7 (8-139)||(35133030-35133161)
chr7 (8-139)||(9450014-9450145)
chr7 (8-135)||(22743027-22743154)
chr7 (8-138)||(46700118-46700248)
chr7 (8-139)||(12141184-12141316)
chr7 (8-138)||(39171468-39171598)
chr7 (8-139)||(8001423-8001554)
chr7 (8-139)||(19296953-19297084)
chr7 (8-139)||(48316689-48316820)
chr7 (8-138)||(47590394-47590524)
chr7 (17-139)||(48930799-48930921)
chr7 (30-139)||(48061527-48061636)
chr7 (8-139)||(37837335-37837466)
chr7 (8-139)||(42978693-42978824)
chr7 (8-139)||(45349676-45349807)
chr7 (8-134)||(4999911-5000037)
chr7 (17-139)||(13796806-13796928)
chr7 (9-99)||(24069311-24069401)
chr7 (18-139)||(28044633-28044754)
chr7 (8-139)||(19404634-19404765)
chr7 (8-139)||(34899484-34899615)
chr7 (8-139)||(38798864-38798995)
chr7 (8-138)||(28476310-28476439)
chr7 (17-139)||(41553312-41553433)
chr7 (8-139)||(433548-433681)
chr7 (8-139)||(35496032-35496165)
chr7 (8-84)||(24350771-24350847)
chr7 (3-139)||(35665012-35665148)
chr7 (8-139)||(22927727-22927860)
chr7 (30-139)||(40993262-40993371)
chr7 (9-139)||(46822103-46822235)
chr7 (6-75)||(1769119-1769188)
chr7 (7-84)||(3224343-3224419)
chr7 (8-139)||(45198890-45199023)
chr7 (66-139)||(46822620-46822692)
chr7 (30-139)||(21266499-21266610)
chr7 (72-139)||(32521786-32521854)
chr7 (20-139)||(30756696-30756815)
chr7 (8-82)||(38880512-38880586)
chr7 (17-82)||(5078348-5078413)
chr7 (8-139)||(13592366-13592498)
chr7 (8-139)||(35261385-35261517)
chr7 (72-139)||(3861092-3861159)
chr7 (77-139)||(28407795-28407857)
chr7 (94-139)||(3222981-3223026)
chr7 (8-139)||(17222857-17222990)
chr7 (8-139)||(19560085-19560218)
chr7 (8-121)||(24770329-24770442)
chr7 (8-139)||(42066919-42067052)
chr7 (59-120)||(46821647-46821708)
chr7 (17-85)||(969390-969458)
chr7 (12-52)||(5792883-5792923)
chr7 (72-139)||(7640632-7640700)
chr7 (35-139)||(26623666-26623770)
chr7 (30-138)||(43369632-43369740)
[»] scaffold0017 (1 HSPs)
scaffold0017 (8-139)||(32624-32755)
[»] scaffold0347 (1 HSPs)
scaffold0347 (8-138)||(6111-6241)
[»] scaffold0884 (1 HSPs)
scaffold0884 (8-139)||(1850-1981)
[»] scaffold0050 (1 HSPs)
scaffold0050 (8-139)||(65919-66050)
[»] scaffold0049 (1 HSPs)
scaffold0049 (8-138)||(71178-71308)
[»] scaffold0219 (1 HSPs)
scaffold0219 (30-139)||(14748-14856)
[»] scaffold0042 (1 HSPs)
scaffold0042 (6-139)||(92373-92506)
[»] scaffold0445 (1 HSPs)
scaffold0445 (20-138)||(1437-1555)
[»] scaffold0603 (1 HSPs)
scaffold0603 (32-139)||(7821-7927)
[»] scaffold0262 (1 HSPs)
scaffold0262 (8-99)||(1736-1827)
[»] scaffold0021 (1 HSPs)
scaffold0021 (30-105)||(4275-4350)
[»] scaffold0495 (1 HSPs)
scaffold0495 (8-139)||(5485-5618)
[»] scaffold0128 (1 HSPs)
scaffold0128 (8-139)||(36906-37038)
[»] scaffold0039 (1 HSPs)
scaffold0039 (12-100)||(93192-93280)
[»] scaffold0026 (1 HSPs)
scaffold0026 (8-139)||(71747-71872)
[»] scaffold0888 (1 HSPs)
scaffold0888 (8-139)||(1555-1686)
[»] scaffold0311 (1 HSPs)
scaffold0311 (8-139)||(8778-8911)
[»] scaffold0121 (1 HSPs)
scaffold0121 (34-139)||(31151-31256)
[»] scaffold0634 (1 HSPs)
scaffold0634 (8-139)||(8593-8724)
[»] scaffold0157 (1 HSPs)
scaffold0157 (78-139)||(26952-27013)
[»] scaffold0136 (1 HSPs)
scaffold0136 (30-139)||(9919-10028)


Alignment Details
Target: chr2 (Bit Score: 305; Significance: 1e-171; HSPs: 65)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 305; E-Value: 1e-171
Query Start/End: Original strand, 6 - 415
Target Start/End: Complemental strand, 29574639 - 29574231
Alignment:
Q  6 agattcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccatt 105  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  29574639 agattcaatcaatgatttggacgccaacgttgcagatccggaagcatgaatattatgatgatttagatttcatcatattttttgtagtcattttgtcatt 29574540  T
Q  106 atatattattaacttgggtgttgtgagtttgttctcgaacatacctatacaattttcnnnnnnngtgtgtattaagttcgttctctgactcgtgtatatg 205  Q
    ||||  |||||| ||||  ||||||||||||||||| ||||||| |||||||||||        |||||||| ||||||||||||||||| |||||||||    
T  29574539 atatgctattaatttggacgttgtgagtttgttctc-aacatacatatacaattttttttttgtgtgtgtataaagttcgttctctgacttgtgtatatg 29574441  T
Q  206 aaaacatatatgttagaagagattaatagcttaagtaaatatgtgaggatcaatctcctaagttgcgtgcatccttggttnnnnnnnnttaatttggttc 305  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||    
T  29574440 aaaacatatatgttagaagagattaatagcttaagtaaatatgtgaggatcaatctcctaagttgcgtgcatccttggttaaaaaaaattaatttggttc 29574341  T
Q  306 aaatgtatttacgtcactgtctaactattatggagcaacatattttaatcgaaattttctcatgaggataaattttatatataaaattatatatttttca 405  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29574340 aaatgtatttacgtcactgtctaactattatggagcaacatattttaattgaaattttctcatgaggataaattttatatataaaattatatatttttca 29574241  T
Q  406 attagtattt 415  Q
    ||||||||||    
T  29574240 attagtattt 29574231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 6 - 139
Target Start/End: Original strand, 24461532 - 24461665
Alignment:
Q  6 agattcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccatt 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | |||| ||||||||||||||||||||||||||||||||  |||||| | ||    
T  24461532 agattcaatcgatgatttggacgccaacgttgcagatccggaagcattagtattttggtgatttagatttcatcatattttttgtaggtattttgtcgtt 24461631  T
Q  106 atatattattaacttgggtgttgtgagtttgttc 139  Q
    ||||  ||||||||| ||||||||||||||||||    
T  24461632 atatgctattaactttggtgttgtgagtttgttc 24461665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 10237225 - 10237094
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||||| |||||||||||| ||||||||||||||| ||||||||  |||| || ||||||||||||||||||||| ||||||| ||||||| | || |    
T  10237225 attcaatcaatgatttggacgtcaacgttgcagatccagaagcatgggtattctgatgatttagatttcatcatattatttgtaggcattttgtcgttgt 10237126  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    ||  ||||||||||||||||||||||||||||    
T  10237125 atgctattaacttgggtgttgtgagtttgttc 10237094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 37994375 - 37994506
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||||  |||||||||||| || ||||||||||||||||| | |||||||  |||||||||||||| |||||||| ||||||| ||||||||  ||||    
T  37994375 attcaatgaatgatttggacgtcagcgttgcagatccggaagaaagaatattccggtgatttagattttatcatattatttgtaggcattttgctgttat 37994474  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    ||  ||||||||||||||||||||||||||||    
T  37994475 atgctattaacttgggtgttgtgagtttgttc 37994506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 6 - 139
Target Start/End: Complemental strand, 17249158 - 17249025
Alignment:
Q  6 agattcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccatt 105  Q
    |||||||||| |||||||||||| |||||||||||||||  ||||| || |||| ||||||||||||||  |||||||| ||||||| ||||||||| ||    
T  17249158 agattcaatcaatgatttggacgtcaacgttgcagatccataagcaagagtattctggtgatttagattatatcatattatttgtagacattttgccgtt 17249059  T
Q  106 atatattattaacttgggtgttgtgagtttgttc 139  Q
     |||  |||||||||||||| |||||||||||||    
T  17249058 gtatgctattaacttgggtgctgtgagtttgttc 17249025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 8 - 135
Target Start/End: Original strand, 3309036 - 3309163
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||||| ||||||||| ||  |||||||||||||| ||||||||  |||| |||||||||| ||||||||||||| ||||||||||||||||| || |    
T  3309036 attcaatcaatgatttgggcgttaacgttgcagatccagaagcatgggtattctggtgatttatatttcatcatattatttgtagtcattttgccgttgt 3309135  T
Q  108 atattattaacttgggtgttgtgagttt 135  Q
    ||  |||||||||||||| |||||||||    
T  3309136 atgctattaacttgggtgctgtgagttt 3309163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 8 - 138
Target Start/End: Original strand, 1421767 - 1421897
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||| | |||||||||||| ||||||||||||||||||||||||  ||||  |||||||||| ||| |||||||| ||||||| ||||||| | || |    
T  1421767 attcaagcaatgatttggacgtcaacgttgcagatccggaagcatgggtatttcggtgatttaggttttatcatattatttgtaggcattttgtcgttgt 1421866  T
Q  108 atattattaacttgggtgttgtgagtttgtt 138  Q
    ||  |||||||||||||||||||||||||||    
T  1421867 atgctattaacttgggtgttgtgagtttgtt 1421897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 6 - 125
Target Start/End: Complemental strand, 12647120 - 12647004
Alignment:
Q  6 agattcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccatt 105  Q
    ||||||||||||| ||||||||||||| |||| ||||||||||||||||||||| ||||||||||||||   ||||||||||||||| ||||||||  ||    
T  12647120 agattcaatcgatcatttggacgccaatgttgtagatccggaagcatgaatattttggtgatttagatt---tcatattttttgtaggcattttgctgtt 12647024  T
Q  106 atatattattaacttgggtg 125  Q
    | ||  ||||||||||||||    
T  12647023 agatgctattaacttgggtg 12647004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 20 - 139
Target Start/End: Original strand, 7646581 - 7646700
Alignment:
Q  20 atttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattatatattattaact 119  Q
    ||||||||| ||||||||||||||||||||||||| ||||  ||||| |||  ||| |||||||| ||||||| ||||||||| || |||  ||||||||    
T  7646581 atttggacgtcaacgttgcagatccggaagcatgagtatttcggtgacttaagttttatcatattatttgtaggcattttgccgttgtatgctattaact 7646680  T
Q  120 tgggtgttgtgagtttgttc 139  Q
    ||||||||||||||||||||    
T  7646681 tgggtgttgtgagtttgttc 7646700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 33585744 - 33585613
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||| | |||||||||||| ||||||||||||||||||||||||| || |  |||||||||  ||| |||||||| ||||||  ||||||||| || |    
T  33585744 attcaagcaatgatttggacgtcaacgttgcagatccggaagcatgagtaattcggtgatttaagttttatcatattatttgtatgcattttgccgttgt 33585645  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    ||  ||||||||||||||||||||||||||||    
T  33585644 atgctattaacttgggtgttgtgagtttgttc 33585613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 6 - 139
Target Start/End: Complemental strand, 32448630 - 32448494
Alignment:
Q  6 agattcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttc---atcatattttttgtagtcattttgcc 102  Q
    |||||||||| |||||||||||| ||||||||||||||| |||||| || |||| ||||||||||||||     |||||||| ||||||| |||||||||    
T  32448630 agattcaatcaatgatttggacgtcaacgttgcagatccagaagcaagagtattctggtgatttagattattatatcatattatttgtaggcattttgcc 32448531  T
Q  103 attatatattattaacttgggtgttgtgagtttgttc 139  Q
     || |||  ||||||||||| ||||||||||||||||    
T  32448530 gttgtatgctattaacttggatgttgtgagtttgttc 32448494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 4778844 - 4778975
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||| | |||||||||||| ||||||||||||||||||||||||  ||||  ||||| |||  ||| |||||||| ||||||| ||||||||| || |    
T  4778844 attcaaccaatgatttggacgtcaacgttgcagatccggaagcatgggtatttcggtgacttaagttttatcatattatttgtaggcattttgccgttgt 4778943  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    || ||||||| ||||||| |||||||||||||    
T  4778944 atgttattaatttgggtgctgtgagtttgttc 4778975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 14955620 - 14955751
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||||| ||||||||  || ||||||||||||||| ||| ||||  |||| || |||||||||||| |||||||| ||||||| ||||||  |||| |    
T  14955620 attcaatcaatgatttgagcgtcaacgttgcagatccagaaacatgtgtattctgatgatttagattttatcatattatttgtagacattttatcattgt 14955719  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    || |||||||||| ||||||||||||||||||    
T  14955720 atgttattaacttaggtgttgtgagtttgttc 14955751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 38445257 - 38445388
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||| | |||||||||||| ||||||||||||||||||||| ||  ||||  ||||| |||  ||| |||||||| ||||||| |||||||||||| |    
T  38445257 attcaaccaatgatttggacgtcaacgttgcagatccggaagcgtgggtatttcggtgacttaagttttatcatattatttgtaggcattttgccattgt 38445356  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    || |||||||||| |||| |||||||||||||    
T  38445357 atgttattaactttggtgctgtgagtttgttc 38445388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 16 - 139
Target Start/End: Complemental strand, 4904146 - 4904023
Alignment:
Q  16 gatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattatatattatt 115  Q
    ||||||||||  | ||||||||||||||| |||||||| |||||  ||||| |||||||| |||||||| ||||||| ||||||| | || |||  ||||    
T  4904146 gatgatttgggtgtcaacgttgcagatccagaagcatggatatttcggtgacttagattttatcatattatttgtagacattttgtcgttgtatgctatt 4904047  T
Q  116 aacttgggtgttgtgagtttgttc 139  Q
    ||||||| ||||||||||||||||    
T  4904046 aacttggatgttgtgagtttgttc 4904023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 8 - 138
Target Start/End: Complemental strand, 27097415 - 27097286
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||| | |||||||||||| |||||||||||||| |||||||||  ||||  ||||| |||  ||| |||||||| |||||||  |||||||| || |    
T  27097415 attcaaccaatgatttggacgtcaacgttgcagatctggaagcatgg-tatttcggtgacttaagttttatcatattatttgtaggaattttgccgttgt 27097317  T
Q  108 atattattaacttgggtgttgtgagtttgtt 138  Q
    ||| |||||||||||||||||||||||||||    
T  27097316 atactattaacttgggtgttgtgagtttgtt 27097286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 6 - 139
Target Start/End: Original strand, 37416799 - 37416932
Alignment:
Q  6 agattcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccatt 105  Q
    |||||||||| |||||||||| | |||| ||||||  |||||||||||  |||| | |||||||| |||| |||||||| ||||||| ||||||||| ||    
T  37416799 agattcaatcaatgatttggatgtcaacattgcaggcccggaagcatgtgtattctagtgatttatattttatcatattatttgtagacattttgccgtt 37416898  T
Q  106 atatattattaacttgggtgttgtgagtttgttc 139  Q
     ||| || |||||||||||||| | |||||||||    
T  37416899 gtatgttgttaacttgggtgttataagtttgttc 37416932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 6 - 138
Target Start/End: Original strand, 10929754 - 10929886
Alignment:
Q  6 agattcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccatt 105  Q
    |||||||||| |||||||||||  ||||||||||||||||||||||||  |||| |||||||||| |||| |||||||| ||| ||| |||||||   ||    
T  10929754 agattcaatcaatgatttggacatcaacgttgcagatccggaagcatgtgtattctggtgatttaaattttatcatattatttataggcattttgttgtt 10929853  T
Q  106 atatattattaacttgggtgttgtgagtttgtt 138  Q
      ||  ||||||||||| || ||||||||||||    
T  10929854 gaatgctattaacttggatgctgtgagtttgtt 10929886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 20 - 139
Target Start/End: Original strand, 18763571 - 18763690
Alignment:
Q  20 atttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattatatattattaact 119  Q
    |||||| || ||||||| ||||||||||||||||   |||  ||||| |||| ||| |||||||| ||||||| ||||||||| || |||  ||||||||    
T  18763571 atttgggcgtcaacgttacagatccggaagcatgtgaatttcggtgacttaggttttatcatattatttgtaggcattttgccgttttatgctattaact 18763670  T
Q  120 tgggtgttgtgagtttgttc 139  Q
    ||||||||||||||||||||    
T  18763671 tgggtgttgtgagtttgttc 18763690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 25509077 - 25508946
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||||| ||||| ||| || |||||||||| |||||||| ||||  ||||  | ||| |||||||| ||| |||| ||||||| ||||||||| || |    
T  25509077 attcaatcaatgatctgggcgtcaacgttgcaaatccggaaacatgggtatttcgatgacttagattttatcgtattatttgtaggcattttgccgttgt 25508978  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    || ||||||||||||||| |||||||||||||    
T  25508977 atgttattaacttgggtgatgtgagtttgttc 25508946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 31128789 - 31128663
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||||| ||||||| | || ||||||||||||||||||||||||| ||||   |||| ||| |||| |||||||| ||||||| ||||||||| |||     
T  31128789 attcaatcaatgatttaggcgtcaacgttgcagatccggaagcatgagtatttcagtgacttatattttatcatattatttgtaggcattttgccgtta- 31128691  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
        ||||||||||| ||||||||||||||||    
T  31128690 ----tattaacttggatgttgtgagtttgttc 31128663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 31788547 - 31788678
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||| | |||||||||||| |||||||||||||||| |||||||| ||||   |||| |||| ||| | |||||| ||||||| ||||||||| || |    
T  31788547 attcaagcaatgatttggacgtcaacgttgcagatccgaaagcatgagtatttcagtgacttaggttttaacatattatttgtaggcattttgccgttgt 31788646  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    ||  ||||||||||| || |||||||||||||    
T  31788647 atgctattaacttggatgctgtgagtttgttc 31788678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 36691965 - 36692096
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||| | |||||||||||| |||| ||||||||||  |||||||   |||  |||||||||| ||| |||||||| ||||||| ||||||||| || |    
T  36691965 attcaagcaatgatttggacgtcaacattgcagatcctaaagcatgtgaatttcggtgatttaggttttatcatattatttgtaggcattttgccgtttt 36692064  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    ||  ||||||||||| ||||||||||||||||    
T  36692065 atgctattaacttggttgttgtgagtttgttc 36692096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 9169258 - 9169136
Alignment:
Q  17 atgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattatatattatta 116  Q
    |||||||||||| ||||||||||||||||||||||||  ||||  ||||| |||  | | |||||||| ||||||| ||||||||| || |||  |||||    
T  9169258 atgatttggacgtcaacgttgcagatccggaagcatgggtatttcggtgacttaagtcttatcatattatttgtaggcattttgccgttgtatgctatta 9169159  T
Q  117 acttgggtgttgtgagtttgttc 139  Q
    |||||| || |||||||||||||    
T  9169158 acttggatgctgtgagtttgttc 9169136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 17994739 - 17994604
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||||| |||||||||||| |||||||||| |||||||| |||   ||||  ||||| ||| |||| |||||||| ||||||| |||||||||||| |    
T  17994739 attcaatcaatgatttggacgtcaacgttgcacatccggaaccataggtatttcggtgacttaaattttatcatattatttgtaggcattttgccattgt 17994640  T
Q  108 atat----tattaacttgggtgttgtgagtttgttc 139  Q
    || |    ||||||||||| ||||||||||||||||    
T  17994639 atgtatgctattaacttggatgttgtgagtttgttc 17994604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 29279579 - 29279448
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||||| ||||||||  || ||| ||||||||||||||| ||||| | ||  ||||| ||| |||| |||||||| ||||||| ||||||||| || |    
T  29279579 attcaatcaatgatttgtgcgtcaatgttgcagatccggaaacatgagtttttcggtgacttaaattttatcatattatttgtaggcattttgccgtttt 29279480  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    ||  ||||||||  ||||||||||||||||||    
T  29279479 atgctattaactatggtgttgtgagtttgttc 29279448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 8 - 127
Target Start/End: Original strand, 41694712 - 41694831
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||||| ||||||||| |  ||||||||||||| | |||||||| | ||| |||||| |||||||| |||||||| ||| ||| ||||||| | ||||    
T  41694712 attcaatcaatgatttgggcatcaacgttgcagatgcagaagcatgtagattctggtgacttagattttatcatattatttataggcattttgtcgttat 41694811  T
Q  108 atattattaacttgggtgtt 127  Q
    || |||||||||| ||||||    
T  41694812 atgttattaactttggtgtt 41694831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 8 - 138
Target Start/End: Complemental strand, 7677882 - 7677752
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||| | |||||||||||  |||||||||||||||| |||||||  ||||   |||| |||| ||| |||||||| ||| ||| ||||||||| || |    
T  7677882 attcaagcaatgatttggacatcaacgttgcagatccgaaagcatgggtatttccgtgaattaggttttatcatattatttttaggcattttgccgttgt 7677783  T
Q  108 atattattaacttgggtgttgtgagtttgtt 138  Q
    ||  |||||||||||||| ||||||||||||    
T  7677782 atgctattaacttgggtgctgtgagtttgtt 7677752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 9 - 139
Target Start/End: Original strand, 8809372 - 8809501
Alignment:
Q  9 ttcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattata 108  Q
    ||||||| ||||||||| ||||||| ||||||||||||||||||||  |||   |||| |||||||| |||||| || | |||| ||||||| | || ||    
T  8809372 ttcaatcaatgatttgggcgccaacattgcagatccggaagcatgagaatttcagtgacttagattttatcata-ttatagtagacattttgtcgttgta 8809470  T
Q  109 tattattaacttgggtgttgtgagtttgttc 139  Q
    |  ||||||||||| ||||||||||||||||    
T  8809471 tgctattaacttggatgttgtgagtttgttc 8809501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 6 - 124
Target Start/End: Complemental strand, 23933630 - 23933512
Alignment:
Q  6 agattcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccatt 105  Q
    |||||||||| || ||||||||| ||||||| || ||| ||||||||| ||| | ||||||||||||||| |||||||| |||||||  |||||||| ||    
T  23933630 agattcaatcaattatttggacgtcaacgttacatatctggaagcatggataatctggtgatttagattttatcatattatttgtaggaattttgccgtt 23933531  T
Q  106 atatattattaacttgggt 124  Q
     ||   |||||||||||||    
T  23933530 gtaagctattaacttgggt 23933512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 1415648 - 1415779
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||| | ||||||||| || |||||||| |||||||||||||||   |||  ||||| |||| ||| |||| ||| ||||||| |||||| || ||      
T  1415648 attcaaccaatgatttgggcgtcaacgttgaagatccggaagcatgtgaatttcggtgacttaggttttatcagattatttgtaggcattttaccgttta 1415747  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    ||  ||||||||||||||||||||||||||||    
T  1415748 atgctattaacttgggtgttgtgagtttgttc 1415779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 8 - 138
Target Start/End: Complemental strand, 19595912 - 19595779
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||||  ||||||||| || |||  |||| |||| ||||||||||||||| || |||||| ||||| |||||||| |||||||  |||||||| || |    
T  19595912 attcaataaatgatttgggcgtcaaaattgccgatctggaagcatgaatattttgatgattttgattttatcatattatttgtaggtattttgcctttgt 19595813  T
Q  108 a---tattattaacttgggtgttgtgagtttgtt 138  Q
    |   |||||||||||||| || ||||||||||||    
T  19595812 atgctattattaacttggatgctgtgagtttgtt 19595779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 8 - 131
Target Start/End: Complemental strand, 31210616 - 31210490
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgcc--att 105  Q
    |||||| | |||||||||||| |||||||||||||| | |||||||  ||||  |||||||||| ||| |||||||| ||||||| |||||||||  |||    
T  31210616 attcaagcaatgatttggacgtcaacgttgcagatcagaaagcatgggtatttcggtgatttaggttttatcatattatttgtaggcattttgccggatt 31210517  T
Q  106 at-atattattaacttgggtgttgtga 131  Q
    ||  ||||| | |||||||||||||||    
T  31210516 atgctattaattacttgggtgttgtga 31210490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 4041594 - 4041472
Alignment:
Q  17 atgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattatatattatta 116  Q
    |||||||||||| |||||||||||||||| |||||||| ||||  | | | ||||  || |||||||| ||||||| ||||||||  ||  ||  |||||    
T  4041594 atgatttggacgtcaacgttgcagatccgaaagcatgagtatttcgataacttaggctttatcatattatttgtagccattttgctgttgcatgctatta 4041495  T
Q  117 acttgggtgttgtgagtttgttc 139  Q
    |||| ||||||||||||||||||    
T  4041494 acttaggtgttgtgagtttgttc 4041472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 30400044 - 30399907
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaata------ttatggtgatttagatttcatcatattttttgtagtcattttgc 101  Q
    |||||||| ||||||||| || |||||||||||||||| |||||||| ||      || | |||| |||||||| |||||||| ||||||| ||||||||    
T  30400044 attcaatcaatgatttgggcgtcaacgttgcagatccgaaagcatgagtatttgatttttagtgacttagattttatcatattatttgtaggcattttgc 30399945  T
Q  102 cattatatattattaacttgggtgttgtgagtttgttc 139  Q
    | |  ||| | |||||||| |||||||| |||||||||    
T  30399944 cgtcgtatgtcattaacttaggtgttgtaagtttgttc 30399907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 6 - 139
Target Start/End: Original strand, 16376028 - 16376161
Alignment:
Q  6 agattcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccatt 105  Q
    |||||||||| ||||||| | || ||| ||||||||| |  |||||||  ||||||| ||||||| |||| |||||||| |||||||||||||||   ||    
T  16376028 agattcaatcaatgatttcggcgtcaaagttgcagattcaaaagcatgtgtattatgatgatttaaattttatcatattatttgtagtcattttggtgtt 16376127  T
Q  106 atatattattaacttgggtgttgtgagtttgttc 139  Q
     |||   |||||||||| || |||||||||||||    
T  16376128 gtatgcgattaacttggatgatgtgagtttgttc 16376161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 38 - 139
Target Start/End: Complemental strand, 18107729 - 18107628
Alignment:
Q  38 cagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattatatattattaacttgggtgttgtgagtttgt 137  Q
    ||||||| ||||||||  ||||  | ||| ||||| || |||||||| ||||||| ||||||| | || ||||||||||||||| |||||||||||||||    
T  18107729 cagatccagaagcatgtgtatttcgatgacttagaattaatcatattatttgtaggcattttgtcgttttatattattaacttgcgtgttgtgagtttgt 18107630  T
Q  138 tc 139  Q
    ||    
T  18107629 tc 18107628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 20047072 - 20046939
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagc-atgaatattatggtgatttagatttcatcatat-tttttgtagtcattttgccatt 105  Q
    |||||||| | |||||||||  |||||||||||||||||| || |||||||||  ||||| ||  |||| ||||||| ||||||||| |||| || | ||    
T  20047072 attcaatcaaagatttggacatcaacgttgcagatccggaggccatgaatattccggtgactttaattttatcatatatttttgtaggcattatgtcgtt 20046973  T
Q  106 atatattattaacttgggtgttgtgagtttgttc 139  Q
    |||| |||||||||||| || ||||| |||||||    
T  20046972 atatcttattaacttggatgctgtgattttgttc 20046939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 6 - 139
Target Start/End: Complemental strand, 28533965 - 28533832
Alignment:
Q  6 agattcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccatt 105  Q
    |||||||||  |||||||||||| |||| ||||| |||  ||| |||  |||||  |||||||| ||||| |||||||| |||||||  |||||| | ||    
T  28533965 agattcaataaatgatttggacgtcaactttgcaaatctagaaacattgatattcgggtgatttggattttatcatattatttgtaggtattttgtcgtt 28533866  T
Q  106 atatattattaacttgggtgttgtgagtttgttc 139  Q
     |||  |||||||||| |||||||||||||||||    
T  28533865 gtatgctattaacttgagtgttgtgagtttgttc 28533832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 30 - 139
Target Start/End: Complemental strand, 37876593 - 37876484
Alignment:
Q  30 caacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattatatattattaacttgggtgttgt 129  Q
    |||||||||||||||| |||||||  ||||  ||||| ||| |||| |||||||| ||||||| ||||||||| |  |||  |||||||||||||| ||     
T  37876593 caacgttgcagatccgaaagcatgggtatttcggtgacttaaattttatcatattatttgtaggcattttgccgtcgtatgctattaacttgggtgatgc 37876494  T
Q  130 gagtttgttc 139  Q
    ||||||||||    
T  37876493 gagtttgttc 37876484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 56 - 135
Target Start/End: Complemental strand, 6358842 - 6358763
Alignment:
Q  56 tattatggtgatttagatttcatcatattttttgtagtcattttgccattatatattattaacttgggtgttgtgagttt 135  Q
    |||||||||||||||||||| |||||||| ||||||   |||||| | || |||  ||||||||||||||||||||||||    
T  6358842 tattatggtgatttagattttatcatattatttgtacgtattttgtcgttgtatgctattaacttgggtgttgtgagttt 6358763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 33923796 - 33923927
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||| | ||||||||| || |||||||| |||||||||||||||   |||  ||||| |||| ||| |||||||| |||| || | ||||| | || |    
T  33923796 attcaaccaatgatttgggcgtcaacgttgaagatccggaagcatgtgaatttcggtgacttaggttttatcatattatttgcaggcgttttgtcgtttt 33923895  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    ||  |||||||||||||| |||||||||||||    
T  33923896 atgctattaacttgggtgctgtgagtttgttc 33923927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 30 - 139
Target Start/End: Complemental strand, 11985220 - 11985111
Alignment:
Q  30 caacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattatatattattaacttgggtgttgt 129  Q
    ||||||||||||||| |||| |||| ||||   |||| |||| ||| |||||||| ||||||| ||||||||  || |||  ||||||||||| ||||||    
T  11985220 caacgttgcagatccagaagaatgagtatttcagtgacttaggttttatcatattatttgtaggcattttgctgttgtatcctattaacttggatgttgt 11985121  T
Q  130 gagtttgttc 139  Q
    || |||||||    
T  11985120 gaatttgttc 11985111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 8 - 136
Target Start/End: Complemental strand, 19062361 - 19062228
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatatt-----ttttgtagtcattttgcc 102  Q
    |||||||| |||||||||||| ||||||| |||||||| |||||||  ||||  ||||| |||  ||| ||||||||      ||||||| |||||||||    
T  19062361 attcaatcaatgatttggacgtcaacgtttcagatccgaaagcatgggtatttcggtgacttaagttttatcatattatttaatttgtaggcattttgcc 19062262  T
Q  103 attatatattattaacttgggtgttgtgagtttg 136  Q
     || |||  |||||||||||||| ||||||||||    
T  19062261 gttgtatgctattaacttgggtgatgtgagtttg 19062228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 32679100 - 32678968
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaag-catgaatattatggtgatttagatttcatcatat-tttttgtagtcattttgccatt 105  Q
    |||||||| | |||||||||| |||||||||||||||||| | |||  |||||  ||||| ||  |||| ||||||| ||||||||| |||| |||| ||    
T  32679100 attcaatcaaagatttggacgtcaacgttgcagatccggaggccatagatattccggtgactttaattttatcatatatttttgtaggcattatgccgtt 32679001  T
Q  106 atatattattaacttgggtgttgtgagtttgttc 139  Q
    ||||  ||||||||| | ||||||||||||||||    
T  32679000 atatgctattaactt-gatgttgtgagtttgttc 32678968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 32913331 - 32913464
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaag-catgaatattatggtgatttagatttcatcatat-tttttgtagtcattttgccatt 105  Q
    |||||||| | ||||||| || |||||||||||||||||| | |||| |||||| ||| | ||  |||| ||||||| ||||||||  |||| |||| ||    
T  32913331 attcaatcaaagatttgggcgtcaacgttgcagatccggaggccatggatattacggtcactttaattttatcatatatttttgtatgcattatgccgtt 32913430  T
Q  106 atatattattaacttgggtgttgtgagtttgttc 139  Q
    ||||  ||||||||||| |||||||||| |||||    
T  32913431 atatgctattaacttggatgttgtgagtatgttc 32913464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 8 - 135
Target Start/End: Original strand, 41431119 - 41431248
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccgga-agcatgaatattatggtgatttagatttcatcatat-tttttgtagtcattttgccatt 105  Q
    |||||||| | |||||||| | ||||||||||||||| || | |||| |||||  | ||| ||  |||| ||||||| ||||||||| |||| |||| ||    
T  41431119 attcaatcaaagatttggatgtcaacgttgcagatccagagaccatggatattccgatgactttaattttatcatatatttttgtaggcattatgccgtt 41431218  T
Q  106 atatattattaacttgggtgttgtgagttt 135  Q
    ||||| ||||||||||| ||||||||||||    
T  41431219 atatactattaacttggatgttgtgagttt 41431248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 29173729 - 29173595
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttt---tgtagtcattttgccat 104  Q
    |||||||| || ||||||  | |||||||||||||||| |||||||  ||||  ||||| |||||||| |||||||| ||   ||||  |||||||   |    
T  29173729 attcaatcaattatttgggtgtcaacgttgcagatccgaaagcatgggtatttcggtgacttagattttatcatattattatttgtatgcattttgttgt 29173630  T
Q  105 tatatattattaacttgggtgttgtgagtttgttc 139  Q
    | ||| |||||||||| ||||||||||||||||||    
T  29173629 tgtatgttattaactttggtgttgtgagtttgttc 29173595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 9 - 139
Target Start/End: Complemental strand, 38575474 - 38575342
Alignment:
Q  9 ttcaatcgatgatttggacgccaacgttgcagatccggaagca-tgaatattatggtgatttagatttcatcatat-tttttgtagtcattttgccatta 106  Q
    ||||||| | ||||||| || |||||||||||||||||| ||| || |||||  ||| | ||  |||||||||||| ||||||||| |||| || | |||    
T  38575474 ttcaatcaaagatttgggcgtcaacgttgcagatccggaggcaatggatattccggtcactttaatttcatcatatatttttgtaggcattatgtcgtta 38575375  T
Q  107 tatattattaacttgggtgttgtgagtttgttc 139  Q
    |||  ||||| ||||| ||||||||||||||||    
T  38575374 tatgctattatcttggatgttgtgagtttgttc 38575342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 43397128 - 43396996
Alignment:
Q  8 attcaatcgatgatttggacgccaacgtt-gcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccatta 106  Q
    |||||| | ||||||||| || ||||||| | |||||||||||||||   |||   |||| |||| ||| |||||||| ||||||  ||||||||| ||     
T  43397128 attcaaccaatgatttgggcgtcaacgtttgaagatccggaagcatgtgaatttcagtgacttaggttttatcatattatttgtacgcattttgccgttt 43397029  T
Q  107 tatattattaacttgggtgttgtgagtttgttc 139  Q
    |||  |||||||||||||||||| |||||||||    
T  43397028 tatgctattaacttgggtgttgttagtttgttc 43396996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 68 - 139
Target Start/End: Complemental strand, 12554130 - 12554059
Alignment:
Q  68 ttagatttcatcatattttttgtagtcattttgccattatatattattaacttgggtgttgtgagtttgttc 139  Q
    |||| ||| |||||||| ||||||| ||||||| | || |||  ||||||||||||||||||||||||||||    
T  12554130 ttaggttttatcatattatttgtaggcattttgtcgttgtatgatattaacttgggtgttgtgagtttgttc 12554059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 8 - 135
Target Start/End: Complemental strand, 12677459 - 12677333
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||| | ||||||||| || |||||||| |||||||||||||||   ||| |||||| |||| ||| |||||| || |||||| |||||| || || |    
T  12677459 attcaaccaatgatttgggcgtcaacgttgaagatccggaagcatgtgaattttggtgacttaggttttatcata-ttattgtaggcatttttccgtttt 12677361  T
Q  108 atattattaacttgggtgttgtgagttt 135  Q
    ||  ||||||||||||| || |||||||    
T  12677360 atgctattaacttgggtattatgagttt 12677333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 8 - 137
Target Start/End: Original strand, 45128295 - 45128426
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaag-catgaatattatggtgatttagatttcatcatat-tttttgtagtcattttgccatt 105  Q
    |||||||| | ||||||||||  ||||||||||||||||||| |||| |||||  ||||| ||  |||| ||||||| ||||||||| |||| ||   ||    
T  45128295 attcaatcaaagatttggacgttaacgttgcagatccggaagccatggatattccggtgactttaattttatcatatatttttgtagacattatgttgtt 45128394  T
Q  106 atatattattaacttgggtgttgtgagtttgt 137  Q
    ||||  |||||| |||| ||||||||||||||    
T  45128395 atatgctattaatttggatgttgtgagtttgt 45128426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 38 - 139
Target Start/End: Original strand, 4100458 - 4100557
Alignment:
Q  38 cagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattatatattattaacttgggtgttgtgagtttgt 137  Q
    ||||||||||||||||  ||||  ||||| |||  ||| |||||||| ||||||| ||||||||| || |||  ||||||||| ||||||||||||||||    
T  4100458 cagatccggaagcatgg-tatttcggtgacttaagttttatcatattatttgtaggcattttgccgttgtatgatattaactt-ggtgttgtgagtttgt 4100555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 8805957 - 8806090
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaag-catgaatattatggtgatttagatttcatcatat-tttttgtagtcattttgccatt 105  Q
    |||||||| | ||||| | || ||||||||||||| |||| | |||| |||||  ||| | ||  |||| ||||||| ||||||||| ||||||||| ||    
T  8805957 attcaatcaaagattttggcgtcaacgttgcagattcggaggtcatggatattccggtcactttaattttatcatatatttttgtaggcattttgccgtt 8806056  T
Q  106 atatattattaacttgggtgttgtgagtttgttc 139  Q
    ||||  ||||||||||| ||||||||| ||||||    
T  8806057 atatgctattaacttggatgttgtgagattgttc 8806090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 135
Target Start/End: Original strand, 14423414 - 14423547
Alignment:
Q  6 agattcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccatt 105  Q
    ||||| |||| |||||||||||| |||||||||| |||  ||| ||||  ||||  ||| | |||||||| |||||||| | | ||| ||||||||| ||    
T  14423414 agatttaatcaatgatttggacgtcaacgttgcaaatctagaaacatgggtatttaggttagttagattttatcatattatatttaggcattttgccgtt 14423513  T
Q  106 atatat----tattaacttgggtgttgtgagttt 135  Q
     |||||    |||||||||||||||| |||||||    
T  14423514 gtatatatgttattaacttgggtgttttgagttt 14423547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 72 - 139
Target Start/End: Complemental strand, 27249076 - 27249008
Alignment:
Q  72 atttcatcatat-tttttgtagtcattttgccattatatattattaacttgggtgttgtgagtttgttc 139  Q
    |||||||||||| ||||||||  |||| |||| ||||||  ||||||||||| ||||||||||||||||    
T  27249076 atttcatcatatatttttgtacgcattatgccgttatatgctattaacttggatgttgtgagtttgttc 27249008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 59
Target Start/End: Original strand, 7448350 - 7448389
Alignment:
Q  20 atttggacgccaacgttgcagatccggaagcatgaatatt 59  Q
    ||||||||| ||||||||||||||||||||||||| ||||    
T  7448350 atttggacgtcaacgttgcagatccggaagcatgagtatt 7448389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 30 - 139
Target Start/End: Complemental strand, 459242 - 459132
Alignment:
Q  30 caacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatat-tttttgtagtcattttgccattatatattattaacttgggtgttg 128  Q
    |||||||||||||||||| ||||   ||||   || ||||  |||| ||||||| ||||||||| |||| |||||||||||  ||||||||| | ||||     
T  459242 caacgttgcagatccggatgcataggtatttcagtcattttaattttatcatatatttttgtagacattatgccattatatgctattaactttgatgttt 459143  T
Q  129 tgagtttgttc 139  Q
    |||||||||||    
T  459142 tgagtttgttc 459132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 139
Target Start/End: Complemental strand, 5427856 - 5427747
Alignment:
Q  30 caacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattatatattattaacttgggtgttgt 129  Q
    |||||||||||||||||||| |||  ||||   |||| |||| ||| |||||||| |||| |  ||||||  | || |||  |||||||||||||| |||    
T  5427856 caacgttgcagatccggaagtatgtgtatttcagtgacttaggttttatcatattatttgcaagcattttatcgttgtatgctattaacttgggtgctgt 5427757  T
Q  130 gagtttgttc 139  Q
    ||||||||||    
T  5427756 gagtttgttc 5427747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 39 - 92
Target Start/End: Original strand, 21612360 - 21612413
Alignment:
Q  39 agatccggaagcatgaatattatggtgatttagatttcatcatattttttgtag 92  Q
    |||||||||||||| | |||| |||||||||| |||| |||||||| |||||||    
T  21612360 agatccggaagcataagtattctggtgatttatattttatcatattgtttgtag 21612413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 102
Target Start/End: Complemental strand, 36943121 - 36943036
Alignment:
Q  17 atgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgcc 102  Q
    ||||||||| || ||||||||||||||||||| ||||  ||||  ||||| ||  |||| |||||||| ||||||| |||| ||||    
T  36943121 atgatttgggcgtcaacgttgcagatccggaaacatgggtatttcggtgacttgaattttatcatattatttgtaggcattatgcc 36943036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 72 - 139
Target Start/End: Complemental strand, 7015636 - 7015568
Alignment:
Q  72 atttcatcatat-tttttgtagtcattttgccattatatattattaacttgggtgttgtgagtttgttc 139  Q
    |||| ||||||| ||||||||| |||| |||| ||||||  ||||||||||| || |||||||||||||    
T  7015636 attttatcatatatttttgtaggcattatgccgttatatgctattaacttggatgctgtgagtttgttc 7015568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 72 - 139
Target Start/End: Complemental strand, 8971553 - 8971485
Alignment:
Q  72 atttcatcatat-tttttgtagtcattttgccattatatattattaacttgggtgttgtgagtttgttc 139  Q
    |||| ||||||| ||||||||| |||| |||| ||||||  ||||||||||| || |||||||||||||    
T  8971553 attttatcatatatttttgtagacattatgccgttatatgctattaacttggatgctgtgagtttgttc 8971485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 72 - 139
Target Start/End: Complemental strand, 9986267 - 9986199
Alignment:
Q  72 atttcatcatat-tttttgtagtcattttgccattatatattattaacttgggtgttgtgagtttgttc 139  Q
    |||| ||||||| ||||||||| |||| || | ||||||  ||||||||||| ||||||||||||||||    
T  9986267 attttatcatatatttttgtaggcattatgtcgttatatgctattaacttggatgttgtgagtttgttc 9986199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 98; Significance: 4e-48; HSPs: 76)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 6 - 139
Target Start/End: Complemental strand, 32679151 - 32679018
Alignment:
Q  6 agattcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccatt 105  Q
    |||||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| ||    
T  32679151 agattcaatcgatgatttggacgccaacattgcaaatccggaagcatgagtattatggtgatttagatttcatcatattttttgtaggcattttgccgtt 32679052  T
Q  106 atatattattaacttgggtgttgtgagtttgttc 139  Q
    ||||   |||||||||| ||||||||||||||||    
T  32679051 atatgccattaacttggatgttgtgagtttgttc 32679018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 6 - 139
Target Start/End: Original strand, 47132985 - 47133118
Alignment:
Q  6 agattcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccatt 105  Q
    ||||||||||||||||||||||| |||| |||||||||||||||||||| |||| |||||||||||||||||||||||||||||||| ||||||||| ||    
T  47132985 agattcaatcgatgatttggacgtcaacattgcagatccggaagcatgagtattctggtgatttagatttcatcatattttttgtaggcattttgccgtt 47133084  T
Q  106 atatattattaacttgggtgttgtgagtttgttc 139  Q
    ||||  ||||||||||| ||||||||||||||||    
T  47133085 atatgctattaacttggatgttgtgagtttgttc 47133118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 6 - 139
Target Start/End: Original strand, 24583032 - 24583165
Alignment:
Q  6 agattcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccatt 105  Q
    |||||||||| |||||||||||| ||||||||||||||| |||||| ||||||| ||||||||||||||  |||||||| ||||||| ||||||||| ||    
T  24583032 agattcaatcaatgatttggacgtcaacgttgcagatccagaagcaagaatattctggtgatttagattatatcatattatttgtaggcattttgccgtt 24583131  T
Q  106 atatattattaacttgggtgttgtgagtttgttc 139  Q
     |||  |||||||||||||| |||||||||||||    
T  24583132 gtatgatattaacttgggtgatgtgagtttgttc 24583165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 21947626 - 21947495
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||| | |||||||||||| ||||||||||||||||||||||||||||||  ||||| |||  ||| |||||||| ||||||| ||||||||| || |    
T  21947626 attcaaccaatgatttggacgtcaacgttgcagatccggaagcatgaatatttcggtgacttaagttttatcatattatttgtaggcattttgccgttgt 21947527  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    || ||||||||||||||| |||||||||||||    
T  21947526 attttattaacttgggtgatgtgagtttgttc 21947495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 12 - 139
Target Start/End: Original strand, 48750273 - 48750400
Alignment:
Q  12 aatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattatatat 111  Q
    |||| ||||||||| || |||||||||||||||  |||||||  |||| |||||||||||||||||||||||| ||||||| ||||||||| || |||      
T  48750273 aatcaatgatttgggcgtcaacgttgcagatccataagcatgggtattctggtgatttagatttcatcatattatttgtaggcattttgccgttgtatgc 48750372  T
Q  112 tattaacttgggtgttgtgagtttgttc 139  Q
    ||||||||||||||||||||||||||||    
T  48750373 tattaacttgggtgttgtgagtttgttc 48750400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 6 - 139
Target Start/End: Original strand, 44543354 - 44543487
Alignment:
Q  6 agattcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccatt 105  Q
    |||||||||| |||||||||||| ||||||||||||||| |||||| || |||| | ||||||||||||  |||||||| ||||||| ||||||||| ||    
T  44543354 agattcaatcaatgatttggacgtcaacgttgcagatccagaagcaagagtattctagtgatttagattatatcatattatttgtaggcattttgccgtt 44543453  T
Q  106 atatattattaacttgggtgttgtgagtttgttc 139  Q
     |||  |||||||||||||| |||||||||||||    
T  44543454 ttatgctattaacttgggtgctgtgagtttgttc 44543487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 23 - 139
Target Start/End: Complemental strand, 34413085 - 34412969
Alignment:
Q  23 tggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattatatattattaacttgg 122  Q
    |||||| |||||||| |||||| ||||||||  |||| |||||||||||||||||||||||| ||||||| ||||||||  || ||| ||||||||||||    
T  34413085 tggacgtcaacgttgtagatccagaagcatgggtattctggtgatttagatttcatcatattatttgtaggcattttgcggttgtatgttattaacttgg 34412986  T
Q  123 gtgttgtgagtttgttc 139  Q
    |||||||||||||||||    
T  34412985 gtgttgtgagtttgttc 34412969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 36775718 - 36775587
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||||| ||||||||| || ||||||||||||||| ||| ||||  |||   ||||||||||||||||||||||| ||||||| ||||||||| || |    
T  36775718 attcaatcaatgatttgggcgtcaacgttgcagatccagaaacatgggtatcccggtgatttagatttcatcatattatttgtaggcattttgccgttgt 36775619  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    ||  ||||||||||| ||||||||||||||||    
T  36775618 atgctattaacttggatgttgtgagtttgttc 36775587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 45415651 - 45415773
Alignment:
Q  17 atgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattatatattatta 116  Q
    |||||||||||| |||||||||||||||||||||||   ||||  ||||| |||| ||| |||||||| ||||||| ||||||||| || |||| |||||    
T  45415651 atgatttggacgtcaacgttgcagatccggaagcataggtatttcggtgacttaggttttatcatattatttgtaggcattttgccgttgtataatatta 45415750  T
Q  117 acttgggtgttgtgagtttgttc 139  Q
    | |||||||||||||||||||||    
T  45415751 atttgggtgttgtgagtttgttc 45415773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 11 - 139
Target Start/End: Original strand, 3228356 - 3228484
Alignment:
Q  11 caatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattatata 110  Q
    ||||| ||||||||| || |||||||||||||||| || |||| |||||  | |||||||| ||| |||||||| ||||||| ||||||||| ||||||     
T  3228356 caatcaatgatttgggcgtcaacgttgcagatccgaaatcatggatatttcgatgatttaggttttatcatattatttgtaggcattttgccgttatatg 3228455  T
Q  111 ttattaacttgggtgttgtgagtttgttc 139  Q
    ||||||||||||||| |||| ||||||||    
T  3228456 ttattaacttgggtgatgtgtgtttgttc 3228484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 14872723 - 14872854
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||| | ||||||||| || ||||||||||||||||||||||||  |||| |||||| |||| ||| |||||||| ||||||| ||||||||| || |    
T  14872723 attcaaccaatgatttgggcgtcaacgttgcagatccggaagcatgggtattttggtgacttaggttttatcatattatttgtaggcattttgccgttgt 14872822  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    ||  ||||||||||| || |||||||||||||    
T  14872823 atgctattaacttggatgctgtgagtttgttc 14872854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 35484399 - 35484268
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||| | |||||||||||| |||||||||||||||| |||||||  ||||  |||||||| | ||| |||||||| ||||||  ||||||||| || |    
T  35484399 attcaagcaatgatttggacgtcaacgttgcagatccgaaagcatgggtatttcggtgatttcggttttatcatattatttgtaagcattttgccgttgt 35484300  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    ||  ||||||||||||||||||||||||||||    
T  35484299 atgctattaacttgggtgttgtgagtttgttc 35484268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 49626997 - 49627128
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||||| |||||||||||| ||||||||||||| | |||||| || |||| || |||||||||||  ||||| || ||||||| ||||||||| || |    
T  49626997 attcaatcaatgatttggacgtcaacgttgcagatgcagaagcaagagtattctgatgatttagattatatcatcttatttgtagacattttgccgttgt 49627096  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    ||  |||||| |||||||||||||||||||||    
T  49627097 atgctattaatttgggtgttgtgagtttgttc 49627128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 13144820 - 13144689
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||||| |||||||||||| |||  ||||||||| | |||||||| ||||   |||| |||||||| |||||| | ||||||| |||||||||||| |    
T  13144820 attcaatcaatgatttggacgtcaattttgcagatctgaaagcatgagtatttcagtgacttagattttatcataatatttgtaggcattttgccatttt 13144721  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    ||  ||||||||||| ||||||||||||||||    
T  13144720 atgctattaacttggatgttgtgagtttgttc 13144689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 11 - 139
Target Start/End: Complemental strand, 10776466 - 10776338
Alignment:
Q  11 caatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattatata 110  Q
    ||||| |||||||||||| |||| |||||||||| ||||||||| ||||  ||||| |||| ||| ||||| || ||||||| ||||||||  || |||     
T  10776466 caatcaatgatttggacgtcaacattgcagatccagaagcatgagtatttcggtgacttaggttttatcattttatttgtaggcattttgctgttgtatt 10776367  T
Q  111 ttattaacttgggtgttgtgagtttgttc 139  Q
     |||||||||||||| |||||||||||||    
T  10776366 ctattaacttgggtgctgtgagtttgttc 10776338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 7337671 - 7337540
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||| | |||||||| ||| ||||||||||||||||||||||||  ||||  |||||||| | ||| |||||||| ||||||| ||||||||  ||      
T  7337671 attcaagcaatgatttgcacgtcaacgttgcagatccggaagcatgggtatttcggtgattttggttttatcatattatttgtaggcattttgctgttgc 7337572  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    ||  ||||||||||| ||||||||||||||||    
T  7337571 atgctattaacttggctgttgtgagtttgttc 7337540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 27580136 - 27580005
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||||  ||||||||| || |||| |||||||| || |||||||| ||||  ||||| |||||||| |||||||| ||  ||  |||||||||||| |    
T  27580136 attcaataaatgatttgggcgtcaacattgcagattcgaaagcatgagtatttcggtgacttagattttatcatattattcataagcattttgccatttt 27580037  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    ||  ||||||||||||||||||||||||||||    
T  27580036 atgctattaacttgggtgttgtgagtttgttc 27580005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 44915723 - 44915854
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||||| ||||||||| || ||| ||||||||||||||||||||| ||||  |||   |||||||| |||||||| ||||||| ||||||||| || |    
T  44915723 attcaatcaatgatttgggcgtcaatgttgcagatccggaagcatgagtatttcggtttcttagattttatcatattatttgtaggcattttgccgttgt 44915822  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    ||  |||  ||||||||| |||||||||||||    
T  44915823 atgctatcgacttgggtgatgtgagtttgttc 44915854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 8 - 138
Target Start/End: Original strand, 16262945 - 16263075
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||||| ||||||||  |  ||||||||||||||||||||||||| |||| || |||||||||||| ||||| || || |||  ||||||||| || |    
T  16262945 attcaatcaatgatttgtgcatcaacgttgcagatccggaagcatgagtattctgatgatttagattttatcatgttattcgtatgcattttgccgtttt 16263044  T
Q  108 atattattaacttgggtgttgtgagtttgtt 138  Q
    ||  ||||||| || ||||||||||||||||    
T  16263045 atgctattaacatgagtgttgtgagtttgtt 16263075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 9 - 139
Target Start/End: Original strand, 19060994 - 19061124
Alignment:
Q  9 ttcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattata 108  Q
    ||||||| || ||||||||  ||| |||| |||||| |||| | || |||| ||||||||||||||  |||||||| ||||||| ||||||||| || ||    
T  19060994 ttcaatcaataatttggacatcaatgttgtagatccagaaggaagagtattctggtgatttagattatatcatattatttgtaggcattttgccgttgta 19061093  T
Q  109 tattattaacttgggtgttgtgagtttgttc 139  Q
    |  ||||||||||| ||||||||||||||||    
T  19061094 tgctattaacttggatgttgtgagtttgttc 19061124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 9 - 139
Target Start/End: Original strand, 31317821 - 31317951
Alignment:
Q  9 ttcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattata 108  Q
    ||||||| ||||||||| || ||||||| |||| ||||||||||| |||||  ||||||||||| || |||||||| ||||||| ||||||  | ||  |    
T  31317821 ttcaatcaatgatttgggcgtcaacgttacagacccggaagcatggatatttcggtgatttagaatttatcatattatttgtaggcattttatcgttgca 31317920  T
Q  109 tattattaacttgggtgttgtgagtttgttc 139  Q
    |  |||||||||||||| |||||||||||||    
T  31317921 tcctattaacttgggtgatgtgagtttgttc 31317951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 6 - 139
Target Start/End: Original strand, 25564080 - 25564213
Alignment:
Q  6 agattcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccatt 105  Q
    |||||||||| ||||||||| || |||| ||||||||| |||||||||| |||| |||||||||| |||| || ||||| |||||||  ||||||   ||    
T  25564080 agattcaatcaatgatttgggcgtcaacattgcagatctggaagcatgattattctggtgatttatattttattatattgtttgtagatattttgttgtt 25564179  T
Q  106 atatattattaacttgggtgttgtgagtttgttc 139  Q
     ||| ||||||||||||||  | |||||||||||    
T  25564180 gtatgttattaacttgggtcctatgagtttgttc 25564213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 34878286 - 34878155
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatga-atattatggtgatttagatttcatcatattttttgtagtcattttgccatta 106  Q
    |||||| | ||||||||| || |||||||| |||||||||||||||  |||||  | ||| |||| ||| |||||||| ||||||| ||||||||| ||     
T  34878286 attcaaccaatgatttgggcgtcaacgttgaagatccggaagcatgtgatattcag-tgacttaggttttatcatattatttgtaggcattttgccgttt 34878188  T
Q  107 tatattattaacttgggtgttgtgagtttgttc 139  Q
    |||  ||||||||||||||||||||||||||||    
T  34878187 tatgctattaacttgggtgttgtgagtttgttc 34878155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 20 - 139
Target Start/End: Original strand, 4413210 - 4413329
Alignment:
Q  20 atttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattatatattattaact 119  Q
    |||||| || ||||||||||||||||||||||||||||||  ||||| |||| ||| |||||||| ||||||| ||||||||  || |||  |||||| |    
T  4413210 atttgggcgtcaacgttgcagatccggaagcatgaatatttcggtgacttaggttttatcatattatttgtaggcattttgctgttgtatgctattaaat 4413309  T
Q  120 tgggtgttgtgagtttgttc 139  Q
    || ||| ||||| |||||||    
T  4413310 tgagtgctgtgaatttgttc 4413329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 5983920 - 5984051
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||| | ||||||||| || ||||| ||||||||||||||||||  ||||  ||||| |||  ||| |||||||| ||||||| ||||||| | || |    
T  5983920 attcaaccaatgatttgggcgtcaacgctgcagatccggaagcatgggtatttcggtgacttatgttttatcatattatttgtaggcattttgtcgttgt 5984019  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    ||  |||||||||||||| |||||||||||||    
T  5984020 atgctattaacttgggtgatgtgagtttgttc 5984051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 53 - 139
Target Start/End: Original strand, 24583275 - 24583361
Alignment:
Q  53 gaatattatggtgatttagatttcatcatattttttgtagtcattttgccattatatattattaacttgggtgttgtgagtttgttc 139  Q
    ||||||| ||||||||||||||  |||||||| ||||||| ||||||||| || |||  |||||||||||||| |||||||||||||    
T  24583275 gaatattctggtgatttagattatatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgatgtgagtttgttc 24583361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 19 - 138
Target Start/End: Original strand, 7997891 - 7998012
Alignment:
Q  19 gatttggacgccaacgttgcagatccggaagca-tgaatattatggtgatttagatttcatcatat-tttttgtagtcattttgccattatatattatta 116  Q
    ||||||| || |||||||||||||||||| ||| ||||||||  ||| | ||  |||||||||||| ||||||||| |||| |||| |||||| ||||||    
T  7997891 gatttgggcgtcaacgttgcagatccggaggcaatgaatattccggtcactttaatttcatcatatatttttgtaggcattatgccgttatatgttatta 7997990  T
Q  117 acttgggtgttgtgagtttgtt 138  Q
    |||||| || ||||||||||||    
T  7997991 acttggatgatgtgagtttgtt 7998012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 10 - 139
Target Start/End: Original strand, 31984247 - 31984376
Alignment:
Q  10 tcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattatat 109  Q
    |||||| ||||||||| || |||||||||| |||||||||||||  ||||  ||||| |||| ||| |||||||| ||| ||  ||||||| | || |||    
T  31984247 tcaatcaatgatttgggcgtcaacgttgcaaatccggaagcatgggtatttcggtgacttaggttttatcatattatttttaagcattttgtcgttgtat 31984346  T
Q  110 attattaacttgggtgttgtgagtttgttc 139  Q
      |||||||||||||||||||| |||||||    
T  31984347 gctattaacttgggtgttgtgactttgttc 31984376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 17 - 138
Target Start/End: Complemental strand, 37720148 - 37720027
Alignment:
Q  17 atgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattatatattatta 116  Q
    ||||||||| || |||||||||||||||  |||||||  |||| |||| |||||||||| |||||||| ||||||| |||||| |  |   ||  |||||    
T  37720148 atgatttgggcgtcaacgttgcagatccaaaagcatgggtattctggttatttagattttatcatattatttgtaggcatttttctgtggaatgctatta 37720049  T
Q  117 acttgggtgttgtgagtttgtt 138  Q
    ||||||||||||||||||||||    
T  37720048 acttgggtgttgtgagtttgtt 37720027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 50166089 - 50165956
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagc-atgaatattatggtgatttagatttcatcatat-tttttgtagtcattttgccatt 105  Q
    |||||||| | |||||||||| |||||||| ||||||||| || |||  |||| |||||| ||  |||| ||||||| ||||||||| |||| |||| ||    
T  50166089 attcaatcaaagatttggacgtcaacgttgtagatccggaggccatgggtattctggtgactttaattttatcatatatttttgtaggcattatgccgtt 50165990  T
Q  106 atatattattaacttgggtgttgtgagtttgttc 139  Q
    ||||  ||||||||||| ||||||||||||||||    
T  50165989 atatgctattaacttggatgttgtgagtttgttc 50165956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 51868635 - 51868502
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccgga-agcatgaatattatggtgatttagatttcatcatat-tttttgtagtcattttgccatt 105  Q
    |||||||| | |||||||||| |||||||||||||| ||| | ||||||||||  | ||| ||  |||| ||||||| ||||||||| |||| |||| ||    
T  51868635 attcaatcaaagatttggacgtcaacgttgcagatctggagaccatgaatattccgatgactttaattttatcatatatttttgtaggcattatgccgtt 51868536  T
Q  106 atatattattaacttgggtgttgtgagtttgttc 139  Q
    |||| |||||||||||| || |||||||||||||    
T  51868535 atatgttattaacttggatgctgtgagtttgttc 51868502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 49504594 - 49504472
Alignment:
Q  17 atgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattatatattatta 116  Q
    |||||||||| | ||||||||||||||||||||||||| | ||  |||||||| | ||| | |||| | ||| ||| |||||| || || |||  |||||    
T  49504594 atgatttggatgtcaacgttgcagatccggaagcatgagtgtttcggtgatttgggttttaacataatatttttaggcattttaccgttgtatgctatta 49504495  T
Q  117 acttgggtgttgtgagtttgttc 139  Q
    ||||||||| |||||||||||||    
T  49504494 acttgggtgctgtgagtttgttc 49504472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 10 - 91
Target Start/End: Original strand, 15492373 - 15492454
Alignment:
Q  10 tcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgta 91  Q
    |||||| ||||||||| || ||  ||||||||||| | |||||| ||||||||||||||||||||| |||||||| ||||||    
T  15492373 tcaatcaatgatttgggcgtcagtgttgcagatcctggagcatggatattatggtgatttagattttatcatattatttgta 15492454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 7836804 - 7836673
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||| | ||||||||| || |||||||| | ||| ||| |||||   |||  ||||| |||| ||| |||||||| ||||||| ||||||||| || |    
T  7836804 attcaaccaatgatttgggcgtcaacgttgaatatctggaggcatgtgaatttcggtgacttaggttttatcatattatttgtaggcattttgccgtttt 7836705  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    ||  |||||||||||||| |||||||||||||    
T  7836704 atgctattaacttgggtgctgtgagtttgttc 7836673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 15431674 - 15431543
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||||| ||||||||| || |||||||||||||| || |||||  |||||   ||||  ||||||| |||||||| ||||||| ||||||  | || |    
T  15431674 attcaatcaatgatttgggcgtcaacgttgcagatctggcagcattgatatttcagtgacatagattttatcatattatttgtagacattttatcgttgt 15431575  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    ||  |||| |||||| ||||||||||||||||    
T  15431574 atgctattcacttggatgttgtgagtttgttc 15431543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 23291650 - 23291519
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||| | ||||||||| |  |||||||| |||||||||||||||   |||  ||||| |||| ||| |||||||| |||| ||  |||||||| || |    
T  23291650 attcaaccaatgatttgggcatcaacgttgaagatccggaagcatgtgaatttcggtgacttaggttttatcatattatttggaggtattttgccgtttt 23291551  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    ||  |||||||||||||| |||||||||||||    
T  23291550 atgctattaacttgggtgctgtgagtttgttc 23291519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 32395082 - 32395213
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||| | |||||||||||| ||||||||||||| || |||||||  ||||  ||||| |||  ||| |||||||| ||| ||| |||||||||  | |    
T  32395082 attcaaccaatgatttggacgtcaacgttgcagattcgaaagcatgggtatttcggtgacttaagttttatcatattatttataggcattttgccgctgt 32395181  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    ||  |||||||||||||| ||| |||||||||    
T  32395182 atgctattaacttgggtgctgtaagtttgttc 32395213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 52 - 139
Target Start/End: Original strand, 34529202 - 34529289
Alignment:
Q  52 tgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattatatattattaacttgggtgttgtgagtttgttc 139  Q
    ||||||||||||||||||| |||| |||| ||| ||||||| ||||||    || |||| |||||||||||||| |||||||||||||    
T  34529202 tgaatattatggtgatttaaattttatcacattatttgtaggcatttttttgttgtatactattaacttgggtgatgtgagtttgttc 34529289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 34 - 139
Target Start/End: Complemental strand, 41081667 - 41081561
Alignment:
Q  34 gttgcagatccggaagcatgaatattatggtgatttagatttcatcatat-tttttgtagtcattttgccattatatattattaacttgggtgttgtgag 132  Q
    |||||||||||||| |||||  |||| |||| ||||  |||| ||||||| ||||||||| |||| |||  |||||| ||||||||| || |||||||||    
T  41081667 gttgcagatccggaggcatgtgtattctggtcattttaattttatcatatatttttgtaggcattatgcagttatatgttattaactcggatgttgtgag 41081568  T
Q  133 tttgttc 139  Q
    |||||||    
T  41081567 tttgttc 41081561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 25406274 - 25406141
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaag-catgaatattatggtgatttagatttcatcatat-tttttgtagtcattttgccatt 105  Q
    |||||||| | ||||| |||| ||||||||||||||| || | |||| |||||  ||||| ||  |||| ||||||| ||||||||| |||| |||| ||    
T  25406274 attcaatcaaagatttcgacgtcaacgttgcagatccagaggtcatggatattccggtgactttaattttatcatatatttttgtaggcattatgccgtt 25406175  T
Q  106 atatattattaacttgggtgttgtgagtttgttc 139  Q
    ||||  ||||||||||| || |||||||||||||    
T  25406174 atatgctattaacttggatgctgtgagtttgttc 25406141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 33817158 - 33817025
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagc-atgaatattatggtgatttagatttcatcatat-tttttgtagtcattttgccatt 105  Q
    |||||||| | ||||||||   |||||||||||||||||| || |||||||||  ||| | ||  ||||  |||||| ||||||||| |||| || ||||    
T  33817158 attcaatcaaagatttggatatcaacgttgcagatccggaggccatgaatattccggtcactttaattttctcatatatttttgtaggcattatgtcatt 33817059  T
Q  106 atatattattaacttgggtgttgtgagtttgttc 139  Q
    |||| |||||||||||| || |||||||||||||    
T  33817058 atatgttattaacttggatgatgtgagtttgttc 33817025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 33876628 - 33876495
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagc-atgaatattatggtgatttagatttcatcatat-tttttgtagtcattttgccatt 105  Q
    |||||||| | ||||||||   |||||||||||||||||| || |||||||||  ||| | ||  ||||  |||||| ||||||||| |||| || ||||    
T  33876628 attcaatcaaagatttggatatcaacgttgcagatccggaggccatgaatattccggtcactttaattttctcatatatttttgtaggcattatgtcatt 33876529  T
Q  106 atatattattaacttgggtgttgtgagtttgttc 139  Q
    |||| |||||||||||| || |||||||||||||    
T  33876528 atatgttattaacttggatgatgtgagtttgttc 33876495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 40881003 - 40880870
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagc-atgaatattatggtgatttagatttcatcatat-tttttgtagtcattttgccatt 105  Q
    |||||||| | ||||||| || |||||||||||||||| | || ||| ||||| |||| | ||  |||| ||||||| ||||||||| |||| |||  ||    
T  40881003 attcaatcaaagatttgggcgtcaacgttgcagatccgaaggccatggatattctggtcactttaattttatcatatatttttgtaggcattatgctgtt 40880904  T
Q  106 atatattattaacttgggtgttgtgagtttgttc 139  Q
    ||||  ||||||||||| ||||||||||||||||    
T  40880903 atatgctattaacttggatgttgtgagtttgttc 40880870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 43412458 - 43412539
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttg 89  Q
    |||||||| |||||||| | | ||||||||||||||| ||||||||  |||| ||||||| ||||||| |||||||| ||||    
T  43412458 attcaatcaatgatttgaaagtcaacgttgcagatccagaagcatgcgtattttggtgatctagattttatcatattatttg 43412539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 47 - 139
Target Start/End: Original strand, 16161951 - 16162043
Alignment:
Q  47 aagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattatatattattaacttgggtgttgtgagtttgttc 139  Q
    |||||||  |||| || |||||||||||| |||||||| ||||||| ||||||||| |   ||  ||||||||| ||||||||||||||||||    
T  16161951 aagcatgggtattctgctgatttagattttatcatattatttgtaggcattttgccgtggaatgctattaacttaggtgttgtgagtttgttc 16162043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 12 - 92
Target Start/End: Original strand, 41994515 - 41994595
Alignment:
Q  12 aatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtag 92  Q
    |||| |||||||||||| |||||||||  ||||||||| | || |||| ||||||||||||||| ||||| || |||||||    
T  41994515 aatcaatgatttggacgtcaacgttgctaatccggaagaacgagtattctggtgatttagattttatcattttatttgtag 41994595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 63 - 138
Target Start/End: Original strand, 16989510 - 16989585
Alignment:
Q  63 gtgatttagatttcatcatattttttgtagtcattttgccattatatattattaacttgggtgttgtgagtttgtt 138  Q
    |||| |||| ||| |||||||| ||||||| ||||||||| || |||  |||||||||||||| ||||||||||||    
T  16989510 gtgacttaggttttatcatattatttgtaggcattttgccgttttatgctattaacttgggtgctgtgagtttgtt 16989585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 8 - 137
Target Start/End: Original strand, 28035230 - 28035361
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagc-atgaatattatggtgatttagatttcatcatat-tttttgtagtcattttgccatt 105  Q
    |||||||| | ||||||| || |||| ||||||||||||| || |||||||||  ||| | ||  |||| ||||||  ||||||||| |||| |||| ||    
T  28035230 attcaatcaaagatttgggcgtcaacattgcagatccggaggccatgaatattccggtcactttaattttatcataaatttttgtaggcattatgccgtt 28035329  T
Q  106 atatattattaacttgggtgttgtgagtttgt 137  Q
    |||| |||||||||| | ||||||||||||||    
T  28035330 atatgttattaactttgatgttgtgagtttgt 28035361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 9 - 139
Target Start/End: Original strand, 31919073 - 31919204
Alignment:
Q  9 ttcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttaga-tttcatcatattttttgtagtcattttgccattat 107  Q
    ||||||| ||||||||  |  ||||||||||||||| |||||||||| |||   |||| ||||  ||| |||||||| ||||||| ||||||| | || |    
T  31919073 ttcaatcaatgatttgagcatcaacgttgcagatccagaagcatgaaaatttcagtgacttagggttttatcatattatttgtagacattttgtcgttgt 31919172  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    ||  ||||||||||| ||||| ||||||||||    
T  31919173 atgctattaacttggatgttgcgagtttgttc 31919204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 9 - 134
Target Start/End: Original strand, 50148462 - 50148589
Alignment:
Q  9 ttcaatcgatgatttggacgccaacgttgcagatccggaagc-atgaatattatggtgatttagatttcatcatat-tttttgtagtcattttgccatta 106  Q
    ||||||| | ||| ||| || ||||||||||||||||||||| ||| |||||  ||| | ||  |||||||||||| ||||||||| |||| || | |||    
T  50148462 ttcaatcaaagatgtgggcgtcaacgttgcagatccggaagcaatggatattccggtcactttaatttcatcatatatttttgtaggcattatgtcgtta 50148561  T
Q  107 tatattattaacttgggtgttgtgagtt 134  Q
    |||  ||||||||||| |||||||||||    
T  50148562 tatgctattaacttggatgttgtgagtt 50148589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 7342813 - 7342946
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccgga-agcatgaatattatggtgatttagatttcatcatat-tttttgtagtcattttgccatt 105  Q
    |||||||| | |||||||||| |||||||||||||||||| | |||| |||||  ||||| ||  |||| ||||||| ||||| ||| |||| ||   ||    
T  7342813 attcaatcaaagatttggacgtcaacgttgcagatccggagaccatggatattccggtgactttaattttatcatatatttttataggcattatgatgtt 7342912  T
Q  106 atatattattaacttgggtgttgtgagtttgttc 139  Q
    ||||  ||||||||||| || |||||||||||||    
T  7342913 atatgctattaacttggatgctgtgagtttgttc 7342946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 9919480 - 9919612
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagc-atgaatattatggtgatttagatttcatcatat-tttttgtagtcattttgccatt 105  Q
    |||||||| | |||||| ||| ||| |||||| ||||||| || |||||||||  ||||| ||  |||| ||||||| ||||||||| |||| |||| ||    
T  9919480 attcaatcaaagatttgaacgtcaatgttgcaaatccggaggccatgaatattccggtgactttaatttgatcatatatttttgtag-cattatgccgtt 9919578  T
Q  106 atatattattaacttgggtgttgtgagtttgttc 139  Q
    ||||  ||||||||||| || |||||||||||||    
T  9919579 atatgctattaacttggatgctgtgagtttgttc 9919612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 6 - 99
Target Start/End: Original strand, 18939401 - 18939494
Alignment:
Q  6 agattcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcatttt 99  Q
    ||||| |||| |||||||||||| | |||||||||||| |||||||||  |||| |||||| ||||| || |||| ||| |||| || ||||||    
T  18939401 agatttaatcaatgatttggacgtcgacgttgcagatctggaagcatgtgtattttggtgacttagaatttatcaaattatttgcaggcatttt 18939494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 8 - 53
Target Start/End: Complemental strand, 24597332 - 24597287
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatg 53  Q
    |||||||| |||||||||||| |||||||| |||||||||||||||    
T  24597332 attcaatcaatgatttggacgtcaacgttgtagatccggaagcatg 24597287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 139
Target Start/End: Original strand, 51871966 - 51872087
Alignment:
Q  20 atttggacgccaacgttgcagatccggaagc-atgaatattatggtgatttagatttcatcatat-tttttgtagtcattttgccattatatattattaa 117  Q
    ||||| ||| |||||||||||||||||| || ||| |||||  ||||| ||  |||| ||||||| ||||||||| |||| || | ||||||  ||||||    
T  51871966 atttgaacgtcaacgttgcagatccggaggccatggatattccggtgactttaattttatcatatatttttgtaggcattatgtcgttatatgctattaa 51872065  T
Q  118 cttgggtgttgtgagtttgttc 139  Q
    ||||| || |||||||||||||    
T  51872066 cttggatgctgtgagtttgttc 51872087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 72 - 139
Target Start/End: Original strand, 5701415 - 5701483
Alignment:
Q  72 atttcatcatattttt-tgtagtcattttgccattatatattattaacttgggtgttgtgagtttgttc 139  Q
    |||||||||||| ||| ||||| |||| |||| ||||||  ||||||||||| ||||||||||||||||    
T  5701415 atttcatcatatatttgtgtaggcattatgccgttatatgctattaacttggatgttgtgagtttgttc 5701483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 11454026 - 11454161
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaag-catgaatattatggtgatttagatttcatcatattttt-tgtagtcattttgccatt 105  Q
    |||||||| | ||||||  || |||| ||||||||||||| | |||  ||||| |||| | ||  |||| ||||||| ||| ||||| |||| |||||||    
T  11454026 attcaatcaaagatttgagcgtcaacattgcagatccggaggtcatagatattctggtcactttaattttatcatatatttatgtaggcattatgccatt 11454125  T
Q  106 atatat--tattaacttgggtgttgtgagtttgttc 139  Q
    ||||||  ||||||||||| ||||||||||||||||    
T  11454126 atatatgctattaacttggatgttgtgagtttgttc 11454161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 72 - 139
Target Start/End: Complemental strand, 39927480 - 39927412
Alignment:
Q  72 atttcatcatat-tttttgtagtcattttgccattatatattattaacttgggtgttgtgagtttgttc 139  Q
    |||| ||||||| ||||||||| |||| |||| |||||| ||||||| |||| ||||||||||||||||    
T  39927480 attttatcatatatttttgtaggcattatgccgttatatcttattaatttggatgttgtgagtttgttc 39927412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 135
Target Start/End: Original strand, 40646766 - 40646894
Alignment:
Q  9 ttcaatcgatgatttggacgccaacgttgcagatccggaagc-atgaatattatggtgatttagatttcatcatat-tttttgtagtcattttgccatta 106  Q
    ||||||| | ||||||| || |||||||||||||||||| || ||| ||||| |||| | |   |||||||||||| ||||||||| |||| || | |||    
T  40646766 ttcaatcaaagatttgggcgtcaacgttgcagatccggaggcaatggatattctggtcactataatttcatcatatatttttgtaggcattatgtcgtta 40646865  T
Q  107 tatattattaacttgggtgttgtgagttt 135  Q
    |||  ||||| ||||| ||||||||||||    
T  40646866 tatgctattatcttggatgttgtgagttt 40646894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 138
Target Start/End: Complemental strand, 51373812 - 51373736
Alignment:
Q  62 ggtgatttagatttcatcatattttttgtagtcattttgccattatatattattaacttgggtgttgtgagtttgtt 138  Q
    ||||| ||| |||| |||||||| ||||||| ||||||| | |  |||  |||||||||||||||||||||||||||    
T  51373812 ggtgacttatattttatcatattatttgtaggcattttgtcgtcgtatgctattaacttgggtgttgtgagtttgtt 51373736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 84 - 139
Target Start/End: Original strand, 3871577 - 3871632
Alignment:
Q  84 tttttgtagtcattttgccattatatattattaacttgggtgttgtgagtttgttc 139  Q
    ||||||||| |||| |||| ||||||  ||||||||||| ||||||||||||||||    
T  3871577 tttttgtaggcattatgccgttatatgctattaacttggatgttgtgagtttgttc 3871632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 12635254 - 12635385
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||||| |||||||| ||| || | || || |||  ||||||||  |||| ||| |||||| |||| ||||||||||||  || ||||||| | || |    
T  12635254 attcaatcaatgatttgcacgtcagcctttcatatcacgaagcatgggtattctggcgatttatattttatcatatttttttaaggcattttgtcgttgt 12635353  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    ||  ||||||||||| |||||| |||||||||    
T  12635354 atgctattaacttggatgttgttagtttgttc 12635385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 91
Target Start/End: Complemental strand, 13075663 - 13075580
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgta 91  Q
    |||||||| ||||||| |  | |||||||||||||||| |  ||||| |||| | ||||||||||||| |||||||| ||||||    
T  13075663 attcaatcaatgatttaggaggcaacgttgcagatccgaagacatgagtattctagtgatttagattttatcatattatttgta 13075580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 56 - 135
Target Start/End: Original strand, 14489404 - 14489483
Alignment:
Q  56 tattatggtgatttagatttcatcatattttttgtagtcattttgccattatatattattaacttgggtgttgtgagttt 135  Q
    |||| ||||||||||||||| |||||||| |||||||  ||||||   || ||| |||||||||||||| ||| ||||||    
T  14489404 tattctggtgatttagattttatcatattatttgtaggtattttgttgttgtatgttattaacttgggtattgagagttt 14489483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 12 - 75
Target Start/End: Original strand, 26535437 - 26535500
Alignment:
Q  12 aatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagattt 75  Q
    |||| ||||||||| |  ||||||||||||||||||||||||| ||||  ||||| ||||||||    
T  26535437 aatcaatgatttgggcttcaacgttgcagatccggaagcatgagtattccggtgacttagattt 26535500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 41 - 126
Target Start/End: Complemental strand, 40163414 - 40163327
Alignment:
Q  41 atccggaagcatgaatattatggtgatttaga-tttcatcat-attttttgtagtcattttgccattatatattattaacttgggtgt 126  Q
    |||||||||||||  || |||||||||||||| ||||||||| || |||| ||| |||||||||||  |||  |||||||||||||||    
T  40163414 atccggaagcatgggtaatatggtgatttagattttcatcataatattttttaggcattttgccatcgtatgctattaacttgggtgt 40163327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 51916673 - 51916599
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatat 83  Q
    |||||||| ||||||||  || ||||||||||||| ||||||||||| |||| | |||| |||||||| |||||||    
T  51916673 attcaatcaatgatttgagcgtcaacgttgcagatacggaagcatgagtatt-tcgtgacttagattttatcatat 51916599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 139
Target Start/End: Complemental strand, 7312084 - 7311963
Alignment:
Q  19 gatttggacgccaacgttgcagatccggaagcatgaatattatggtga-tttagatttcatcatat-tttttgtagtcattttgccattatatattatta 116  Q
    |||||||||| |||| ||||||||||||  |||||| ||||  ||| | ||||| ||| ||||||| ||||||||| |||| |||| ||||||| |||||    
T  7312084 gatttggacgtcaacattgcagatccggttgcatgagtatttcggtcactttagtttt-atcatatatttttgtaggcattatgccgttatatactatta 7311986  T
Q  117 acttgggtgttgtgagtttgttc 139  Q
    |||||| | || | |||||||||    
T  7311985 acttggatattataagtttgttc 7311963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 135
Target Start/End: Original strand, 19723404 - 19723533
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagc-atgaatattatggtgatttagatttcatcatat-tttttgtagtcattttgccatt 105  Q
    |||||||| | ||||||| || |||||| ||||||||||| || ||| |||||  ||| | ||  |||| ||||||| ||||||||| |||| || | ||    
T  19723404 attcaatcaaagatttgggcgtcaacgtagcagatccggaggcgatggatatttcggttactttaattttatcatatatttttgtaggcattatgtcgtt 19723503  T
Q  106 atatattattaacttgggtgttgtgagttt 135  Q
    |||| |||||||||||| || |||||||||    
T  19723504 atatgttattaacttggatgctgtgagttt 19723533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 45805818 - 45805686
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaag-catgaatattatggtgatttagatttcatcatat-tttttgtagtcattttgccatt 105  Q
    |||||||| | |||||| ||| |||||||||||||||||| | |||| |||||  ||||| ||  |||| ||||||| |||||||||  ||| || | ||    
T  45805818 attcaatcaaagatttgaacgtcaacgttgcagatccggaggccatggatattccggtgactttaattttatcatatatttttgtaggtattatgtcgtt 45805719  T
Q  106 atatattattaacttgggtgttgtgagtttgttc 139  Q
    ||||  ||||||||||| || |||||||||||||    
T  45805718 atat-gtattaacttggatgatgtgagtttgttc 45805686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 62 - 139
Target Start/End: Original strand, 50377461 - 50377538
Alignment:
Q  62 ggtgatttagatttcatcatattttttgtagtcattttgccattatatattattaacttgggtgttgtgagtttgttc 139  Q
    ||||| |||||||| |||||||| | ||||| |||||| || |  ||| ||||||||||||||| || ||||||||||    
T  50377461 ggtgacttagattttatcatattgtctgtaggcatttttccgtcgtatgttattaacttgggtgctgagagtttgttc 50377538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 39 - 136
Target Start/End: Complemental strand, 50616652 - 50616555
Alignment:
Q  39 agatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattatatattattaacttgggtgttgtgagtttg 136  Q
    |||| ||||||||||| |||| | |||||||| |||| |||||||| |||||||  |||||||| ||  ||  || | |||||| |||||||||||||    
T  50616652 agatacggaagcatgagtatttttgtgatttaaattttatcatattatttgtagatattttgcctttgcatgctaatgacttggatgttgtgagtttg 50616555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 39 - 136
Target Start/End: Complemental strand, 50624479 - 50624382
Alignment:
Q  39 agatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattatatattattaacttgggtgttgtgagtttg 136  Q
    |||| ||||||||||| |||| | |||||||| |||| |||||||| |||||||  |||||||| ||  ||  || | |||||| |||||||||||||    
T  50624479 agatacggaagcatgagtatttttgtgatttaaattttatcatattatttgtagatattttgcctttgcatgctaatgacttggatgttgtgagtttg 50624382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 72 - 139
Target Start/End: Original strand, 27872893 - 27872961
Alignment:
Q  72 atttcatcatat-tttttgtagtcattttgccattatatattattaacttgggtgttgtgagtttgttc 139  Q
    |||| ||||||| ||||||||  |||| |||| |||||| |||||||||||  ||||||||||||||||    
T  27872893 attttatcatatatttttgtaagcattatgccgttatatgttattaacttgaatgttgtgagtttgttc 27872961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 72 - 139
Target Start/End: Original strand, 31836990 - 31837058
Alignment:
Q  72 atttcatcatat-tttttgtagtcattttgccattatatattattaacttgggtgttgtgagtttgttc 139  Q
    |||||||||||| ||||||||| |||| |||| ||||||  ||||||||||| |  |||||||||||||    
T  31836990 atttcatcatatatttttgtaggcattatgccgttatatgctattaacttggatactgtgagtttgttc 31837058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 17 - 53
Target Start/End: Complemental strand, 35462048 - 35462012
Alignment:
Q  17 atgatttggacgccaacgttgcagatccggaagcatg 53  Q
    |||||| ||||| ||||||||||||||||||||||||    
T  35462048 atgattcggacgtcaacgttgcagatccggaagcatg 35462012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 94; Significance: 1e-45; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 6 - 139
Target Start/End: Complemental strand, 58098 - 57965
Alignment:
Q  6 agattcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccatt 105  Q
    ||||||||||||||||||||||| |||| |||||||||||||||||||| |||| |||||||||||||||||||||||||||||||| ||||||||| ||    
T  58098 agattcaatcgatgatttggacgtcaacattgcagatccggaagcatgagtattctggtgatttagatttcatcatattttttgtaggcattttgccgtt 57999  T
Q  106 atatattattaacttgggtgttgtgagtttgttc 139  Q
    ||||  ||||||||||| || |||||||||||||    
T  57998 atatgctattaacttggatgctgtgagtttgttc 57965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 94; Significance: 1e-45; HSPs: 83)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 6 - 139
Target Start/End: Complemental strand, 50194345 - 50194212
Alignment:
Q  6 agattcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccatt 105  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||| |||| ||||||||||||| |||||||||||||||||| ||||||||| ||    
T  50194345 agattcaatcgatgatttggacgttaacgttgcagatccggaagcatgagtattctggtgatttagatatcatcatattttttgtaggcattttgccgtt 50194246  T
Q  106 atatattattaacttgggtgttgtgagtttgttc 139  Q
    ||||  ||||||||||| ||||||||||||||||    
T  50194245 atatgctattaacttggatgttgtgagtttgttc 50194212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 51923807 - 51923938
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||||| |||||||||||| ||||||||||||||| ||||||||  |||| |||||||||||||||||||||||| ||||||| ||||||||| || |    
T  51923807 attcaatcaatgatttggacgtcaacgttgcagatccagaagcatgggtattctggtgatttagatttcatcatattatttgtaggcattttgccgttgt 51923906  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    ||  ||||||||||||||||||||||||||||    
T  51923907 atgctattaacttgggtgttgtgagtttgttc 51923938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 51303651 - 51303520
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||||| ||||||||| || ||||||||||||||| ||||||||  |||| |||||||||||||||||||||||| ||||||| ||||||||| || |    
T  51303651 attcaatcaatgatttgggcgtcaacgttgcagatccagaagcatgggtattctggtgatttagatttcatcatattatttgtaggcattttgccgttgt 51303552  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    ||  ||||||||||||||||||||||||||||    
T  51303551 atgctattaacttgggtgttgtgagtttgttc 51303520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 6 - 139
Target Start/End: Complemental strand, 628933 - 628800
Alignment:
Q  6 agattcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccatt 105  Q
    |||||||||| |||||||||||  |||||||| |||||| |||||| || |||| ||||||||||||||  |||||||| ||||||| ||||||||| ||    
T  628933 agattcaatcaatgatttggacatcaacgttgtagatccagaagcaagagtattctggtgatttagattatatcatattatttgtaggcattttgccgtt 628834  T
Q  106 atatattattaacttgggtgttgtgagtttgttc 139  Q
     |||  ||||||||||||||||||||||||||||    
T  628833 gtattctattaacttgggtgttgtgagtttgttc 628800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 6 - 139
Target Start/End: Complemental strand, 53807868 - 53807735
Alignment:
Q  6 agattcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccatt 105  Q
    |||||||||| |||||||||||| |||||||||| |||| |||||| || |||| ||||||||||||||  |||||||| ||||||| ||||||||| ||    
T  53807868 agattcaatcaatgatttggacgtcaacgttgcatatccagaagcaagagtattctggtgatttagattatatcatattatttgtaggcattttgccgtt 53807769  T
Q  106 atatattattaacttgggtgttgtgagtttgttc 139  Q
     |||  |||||||||||||| |||||||||||||    
T  53807768 gtatgctattaacttgggtggtgtgagtttgttc 53807735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 4821887 - 4822017
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||||| ||||||||||| |||||||| || ||||||| |||||  |||| |||||||||| ||||||||||||||||||||| ||||||||  ||||    
T  4821887 attcaatccatgatttggacaccaacgttacaaatccggaggcatgggtattctggtgattta-atttcatcatattttttgtaggcattttgctgttat 4821985  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    ||  |||||||||||||| |||||||||||||    
T  4821986 atgctattaacttgggtgatgtgagtttgttc 4822017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 8914792 - 8914923
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||||| ||||||||| || ||||||||||||||| |||| |||  |||| |||||||||||||||||||||||| ||||||| ||||||||| || |    
T  8914792 attcaatcaatgatttgggcgtcaacgttgcagatccagaagaatgtgtattctggtgatttagatttcatcatattatttgtaggcattttgccgttgt 8914891  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    ||  |||||||||| ||| |||||||||||||    
T  8914892 atgctattaacttgagtgatgtgagtttgttc 8914923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 35175484 - 35175615
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||||| |||||||||||  |||||||||||||||| || ||||| |||| || ||||||| ||||||||||||| ||||||| ||||||| |||| |    
T  35175484 attcaatcaatgatttggacatcaacgttgcagatccgaaaacatgagtattctgatgatttatatttcatcatattgtttgtaggcattttgtcattgt 35175583  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    ||  |||||||||| |||||||||||||||||    
T  35175584 atgctattaacttgagtgttgtgagtttgttc 35175615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 40487414 - 40487536
Alignment:
Q  17 atgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattatatattatta 116  Q
    |||||||||||| |||| ||||||||||||||||||   ||||  ||||| |||| ||| |||||||| ||||||| ||||||||| |||||| ||||||    
T  40487414 atgatttggacgtcaacattgcagatccggaagcataggtatttcggtgacttaggttttatcatattatttgtaggcattttgccgttatatgttatta 40487513  T
Q  117 acttgggtgttgtgagtttgttc 139  Q
    |||||||||||||||||||||||    
T  40487514 acttgggtgttgtgagtttgttc 40487536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 39 - 139
Target Start/End: Complemental strand, 12946944 - 12946844
Alignment:
Q  39 agatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattatatattattaacttgggtgttgtgagtttgtt 138  Q
    |||||| |||| |||| |||| |||||||||||||||||||||||||||||||| ||||||||| ||||||  |||||||||||||||||||| ||||||    
T  12946944 agatccagaagtatgagtattctggtgatttagatttcatcatattttttgtaggcattttgcccttatatgctattaacttgggtgttgtgaatttgtt 12946845  T
Q  139 c 139  Q
    |    
T  12946844 c 12946844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 21289822 - 21289691
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||||| ||||||| |  | ||||||||||||||  |||||||| ||||| |||| ||||||||||||||||||| ||||||| ||||||||| || |    
T  21289822 attcaatcaatgattttggtgtcaacgttgcagatctagaagcatggatattctggtaatttagatttcatcatattatttgtaggcattttgccgttgt 21289723  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    ||  |||||||||||||| |||||||||||||    
T  21289722 atgctattaacttgggtgctgtgagtttgttc 21289691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 8 - 135
Target Start/End: Complemental strand, 45568453 - 45568326
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||| | |||||||||||| |||| ||||||||||||||||||| |||||  |||||||||| ||| |||||||| ||||||| ||||||||| || |    
T  45568453 attcaaacaatgatttggacgtcaactttgcagatccggaagcatggatatttgggtgatttaggttttatcatattatttgtaggcattttgccgttgt 45568354  T
Q  108 atattattaacttgggtgttgtgagttt 135  Q
    ||  |||||||||||||| |||||||||    
T  45568353 atgctattaacttgggtgatgtgagttt 45568326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 16235506 - 16235637
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||||| ||||||||| || ||||||||||||||  ||||||||  |||| ||||||||||||||||||||||||  |||||| ||||||| | || |    
T  16235506 attcaatcaatgatttgggcgtcaacgttgcagatcaagaagcatgggtattctggtgatttagatttcatcatattacttgtaggcattttgtcgttgt 16235605  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    ||  ||||||||||| || |||||||||||||    
T  16235606 atgctattaacttggatggtgtgagtttgttc 16235637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 29922137 - 29922268
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||||| |||||||||||| ||||||||||||||| ||| ||||| | || ||||||||||||||| |||||||| ||||||| ||||||||| || |    
T  29922137 attcaatcaatgatttggacgtcaacgttgcagatccagaaacatgattgttctggtgatttagattttatcatattgtttgtaggcattttgccgttgt 29922236  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    ||  |||||||||||    |||||||||||||    
T  29922237 atgctattaacttggaaaatgtgagtttgttc 29922268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 29971290 - 29971421
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||||| |||||||||||| ||||||||||||||| ||| ||||| | || ||||||||||||||| |||||||| ||||||| ||||||||| || |    
T  29971290 attcaatcaatgatttggacgtcaacgttgcagatccagaaacatgattgttctggtgatttagattttatcatattgtttgtaggcattttgccgttgt 29971389  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    ||  |||||||||||    |||||||||||||    
T  29971390 atgctattaacttggaaaatgtgagtttgttc 29971421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 42460829 - 42460960
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||||| ||||||||| || ||||||||||||| | |||||||||| ||| ||||||||||||||| |||||||| ||||||| |||||||   || |    
T  42460829 attcaatcaatgatttgggcgtcaacgttgcagatacagaagcatgaacattctggtgatttagattttatcatattatttgtaggcattttgttgttgt 42460928  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    ||  |||||||||||||  |||||||||||||    
T  42460929 atgctattaacttgggtactgtgagtttgttc 42460960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 8 - 138
Target Start/End: Original strand, 7546695 - 7546825
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    ||||| || ||||||||  || ||||||||| |||||  |||||||  |||| |||||||||||||||||||||||| ||||||| ||||||||| || |    
T  7546695 attcagtcaatgatttgagcgtcaacgttgccgatccaaaagcatgggtattctggtgatttagatttcatcatattatttgtaggcattttgccgttgt 7546794  T
Q  108 atattattaacttgggtgttgtgagtttgtt 138  Q
    ||  |||||||||||||| ||||||||||||    
T  7546795 atgctattaacttgggtgctgtgagtttgtt 7546825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 8 - 137
Target Start/End: Complemental strand, 23799918 - 23799789
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||||| ||||||| | || |||||||||||||||| || ||||| ||||    ||| |||||||| |||||||| ||||||| ||||||||| || |    
T  23799918 attcaatcaatgatttcggcgtcaacgttgcagatccgaaaacatgagtatttcaatgacttagattttatcatattatttgtaggcattttgccgttgt 23799819  T
Q  108 atattattaacttgggtgttgtgagtttgt 137  Q
    || |||||||||||||||||||||||||||    
T  23799818 atgttattaacttgggtgttgtgagtttgt 23799789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 7448922 - 7448791
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||| | |||||||||||| |||||||||| |||||||||||||| ||||  ||||| |||  |||||||||||| ||||||| |||||||||  | |    
T  7448922 attcaaccaatgatttggacgtcaacgttgcatatccggaagcatgagtatttcggtgacttaagtttcatcatattatttgtagacattttgccgctgt 7448823  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    ||  ||||||||| |||| |||||||||||||    
T  7448822 atgctattaacttaggtgatgtgagtttgttc 7448791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 7457064 - 7456933
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||| | |||||||||||| |||||||||| |||||||||||||| ||||  ||||| |||  |||||||||||| ||||||| |||||||||  | |    
T  7457064 attcaaccaatgatttggacgtcaacgttgcatatccggaagcatgagtatttcggtgacttaagtttcatcatattatttgtagacattttgccgctgt 7456965  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    ||  ||||||||| |||| |||||||||||||    
T  7456964 atgctattaacttaggtgatgtgagtttgttc 7456933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 21313116 - 21313247
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||||| |||||||||||| |||||| ||| ||| | || ||||| ||||  ||||| |||||||| |||||||| ||||||| ||||||||| || |    
T  21313116 attcaatcaatgatttggacgtcaacgtagcatatctgaaatcatgagtatttcggtgacttagattttatcatattatttgtagccattttgccgttgt 21313215  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    ||  |||||||||||||| |||||||||||||    
T  21313216 atgctattaacttgggtgctgtgagtttgttc 21313247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 20 - 139
Target Start/End: Complemental strand, 21533805 - 21533686
Alignment:
Q  20 atttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattatatattattaact 119  Q
    |||||| || ||||||||||||||||||||||||  ||||  ||||| |||| ||| |||||||| ||||||| ||||||||| || |||  ||||||||    
T  21533805 atttgggcgtcaacgttgcagatccggaagcatgggtatttcggtgacttaggttttatcatattatttgtaggcattttgccgttgtatgctattaact 21533706  T
Q  120 tgggtgttgtgagtttgttc 139  Q
    |||||| |||||||||||||    
T  21533705 tgggtgctgtgagtttgttc 21533686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 43488598 - 43488467
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||| | |||||||| ||| ||||||||||||||||||||||||| ||||  |||||||||| ||| |||||||| ||| ||| | ||||||| || |    
T  43488598 attcaagcaatgatttgaacgtcaacgttgcagatccggaagcatgagtatttcggtgatttaggttttatcatattatttttaggctttttgccgttgt 43488499  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    ||  |||||| ||||||| |||||||||||||    
T  43488498 atgctattaatttgggtgctgtgagtttgttc 43488467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 8 - 138
Target Start/End: Original strand, 14859570 - 14859700
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||||| |||||||||||| ||||||||||||||| ||||||||  |||| |||| |||||||||| ||| |||| || || | ||||||| | || |    
T  14859570 attcaatcaatgatttggacgtcaacgttgcagatccagaagcatgggtattttggtaatttagattttatcgtattattggttggcattttgtcgttgt 14859669  T
Q  108 atattattaacttgggtgttgtgagtttgtt 138  Q
    ||  ||||||||||||||||||||| |||||    
T  14859670 atgctattaacttgggtgttgtgagattgtt 14859700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 30 - 138
Target Start/End: Original strand, 4711584 - 4711692
Alignment:
Q  30 caacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattatatattattaacttgggtgttgt 129  Q
    ||||||||||||||||||||||||  ||||  ||||| |||  ||| |||||||| ||||||| ||||||||| || |||  ||||||||||||||||||    
T  4711584 caacgttgcagatccggaagcatgggtatttcggtgacttaagttttatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgttgt 4711683  T
Q  130 gagtttgtt 138  Q
    |||||||||    
T  4711684 gagtttgtt 4711692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 19 - 139
Target Start/End: Original strand, 21431704 - 21431824
Alignment:
Q  19 gatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattatatattattaac 118  Q
    |||||||||| ||||||||||||||||||||||||  ||||  ||||| |||  ||| |||||||| ||||||| ||||||||| || |||  |||||||    
T  21431704 gatttggacgtcaacgttgcagatccggaagcatgggtatttcggtgacttaagttttatcatattatttgtaggcattttgccgttgtatgatattaac 21431803  T
Q  119 ttgggtgttgtgagtttgttc 139  Q
    ||||||| |||||| ||||||    
T  21431804 ttgggtgctgtgagattgttc 21431824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 10229556 - 10229687
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||| | ||||||||||||  ||||||||||||||  |||||||| ||||  ||||| |||  ||| |||||||| ||||||| ||||||||| || |    
T  10229556 attcaaccaatgatttggacgataacgttgcagatccaaaagcatgattatttcggtgacttaagttttatcatattatttgtaggcattttgccgttgt 10229655  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    ||  |||||||||||||| |||||||||||||    
T  10229656 atgctattaacttgggtgctgtgagtttgttc 10229687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 33579960 - 33580091
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||| | ||||||||| || |||||||| ||||||||||||| |   |||  |||||||||| ||| |||||||| ||||||| ||||||||| || |    
T  33579960 attcaaccaatgatttgggcgtcaacgttgaagatccggaagcacgtgaatttcggtgatttaggttttatcatattatttgtaggcattttgccgtttt 33580059  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    ||  |||||||||||||||||||| |||||||    
T  33580060 atgctattaacttgggtgttgtgattttgttc 33580091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 40556782 - 40556913
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||| | |||||||||||| |||||||| | |||||||||||||  |||| |||||| |||  ||| |||||||| ||||||| ||||||||| || |    
T  40556782 attcaaccaatgatttggacgtcaacgttgtaaatccggaagcatgtgtattttggtgacttaagttttatcatattatttgtaggcattttgccgttgt 40556881  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    ||  |||  |||||||||||||||||||||||    
T  40556882 atgctatgcacttgggtgttgtgagtttgttc 40556913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 20 - 139
Target Start/End: Complemental strand, 48650730 - 48650611
Alignment:
Q  20 atttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattatatattattaact 119  Q
    ||||||||| |||||||||||||| | ||| |||| ||||  ||||| |||  ||| |||||||| ||||||| ||||||||| || |||  ||||||||    
T  48650730 atttggacgtcaacgttgcagatctgaaagaatgagtatttcggtgacttaagttttatcatattatttgtaggcattttgccgttgtatgctattaact 48650631  T
Q  120 tgggtgttgtgagtttgttc 139  Q
    ||||||||||||||||||||    
T  48650630 tgggtgttgtgagtttgttc 48650611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 52923125 - 52922994
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||| | |||||||||||| ||||||||||||||||||||||||  ||||  ||||| |||  ||| |||||||| ||||||| |||||| || || |    
T  52923125 attcaaccaatgatttggacgtcaacgttgcagatccggaagcatgggtatttcggtgacttaagttttatcatattatttgtaggcattttaccgttgt 52923026  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    ||  ||||||||||| || |||||||||||||    
T  52923025 atgctattaacttggctgctgtgagtttgttc 52922994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 38860122 - 38859989
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatga--atattatggtgatttagatttcatcatattttttgtagtcattttgccatt 105  Q
    |||||| | |||| |||| || |||||||||||||||| || ||||   ||||| |||||| |||| ||| |||||||| ||||||| ||||||||| ||    
T  38860122 attcaaccaatgacttggtcgtcaacgttgcagatccgaaaacatgggtatattttggtgacttaggttttatcatattatttgtaggcattttgccgtt 38860023  T
Q  106 atatattattaacttgggtgttgtgagtttgttc 139  Q
     |||  ||||||||||||||||||||||||||||    
T  38860022 gtatgctattaacttgggtgttgtgagtttgttc 38859989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 30 - 139
Target Start/End: Original strand, 44805131 - 44805239
Alignment:
Q  30 caacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattatatattattaacttgggtgttgt 129  Q
    |||||||||| |||||  ||||||  |||||||||||||||||||| |||||||| ||||||| ||||||| |||| |||  |||||||||||||  |||    
T  44805131 caacgttgcaaatccgagagcatgggtattatggtgatttagattttatcatattgtttgtaggcattttgtcattgtatgctattaacttgggt-atgt 44805229  T
Q  130 gagtttgttc 139  Q
    ||||||||||    
T  44805230 gagtttgttc 44805239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 10233150 - 10233281
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||| | ||||||| ||||  |||||||||||||| ||| ||||| ||||  ||||| |||  ||| |||||||| ||||||| ||||||||| || |    
T  10233150 attcaaccaatgatttagacgataacgttgcagatccagaaacatgagtatttcggtgacttaagttttatcatattatttgtaggcattttgccgttgt 10233249  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    ||  |||||||||||||| |||||||||||||    
T  10233250 atgctattaacttgggtgctgtgagtttgttc 10233281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 27706234 - 27706103
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||||| ||||||| | || |||||||||| ||||  |||||||  |||  |||| ||||||||||||||||||| ||||||| ||||||| | || |    
T  27706234 attcaatcaatgatttcggcgtcaacgttgcatatccacaagcatgggtatcctggttatttagatttcatcatattatttgtaggcattttgtcgttgt 27706135  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    ||  |||||||||||||| ||| |||||||||    
T  27706134 atgctattaacttgggtgctgttagtttgttc 27706103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 8 - 138
Target Start/End: Complemental strand, 6954704 - 6954574
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||| | |||||||||||| ||| | ||||||||||||||||||  ||||  ||||| |||  ||| |||| ||| ||||||| ||||||||| || |    
T  6954704 attcaaccaatgatttggacgtcaatgctgcagatccggaagcatgggtatttcggtgacttatgttttatcaaattatttgtaggcattttgccgttgt 6954605  T
Q  108 atattattaacttgggtgttgtgagtttgtt 138  Q
    ||  |||||||||||||| ||||||||||||    
T  6954604 atgctattaacttgggtgctgtgagtttgtt 6954574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 8 - 138
Target Start/End: Complemental strand, 9797542 - 9797412
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||| | |||||||| |||  |||||||||||||||||||||||  ||||   ||||||||  ||| |||||||| ||||||| ||||||| | || |    
T  9797542 attcaagcaatgatttgaacgttaacgttgcagatccggaagcatgggtatttaagtgatttatgttttatcatattatttgtaggcattttgtcgttgt 9797443  T
Q  108 atattattaacttgggtgttgtgagtttgtt 138  Q
    ||  |||||||||||||| ||||||||||||    
T  9797442 atgctattaacttgggtgctgtgagtttgtt 9797412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 64 - 138
Target Start/End: Complemental strand, 52115973 - 52115899
Alignment:
Q  64 tgatttagatttcatcatattttttgtagtcattttgccattatatattattaacttgggtgttgtgagtttgtt 138  Q
    |||||||||||  |||||||| |||||||||||||||   |||||| ||||||||||||||||||||||||||||    
T  52115973 tgatttagattgtatcatattatttgtagtcattttgttgttatatgttattaacttgggtgttgtgagtttgtt 52115899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 9 - 139
Target Start/End: Original strand, 32607554 - 32607686
Alignment:
Q  9 ttcaatcgatgatttggacgccaacgttgcagatccggaagca-tgaatattatggtgatttagatttcatcatat-tttttgtagtcattttgccatta 106  Q
    ||||||| | ||||||| || |||||||||||||||||| ||| ||||||||  | | | ||  |||||||||||| ||||||||| |||| ||||||||    
T  32607554 ttcaatcaaagatttgggcgtcaacgttgcagatccggaggcaatgaatattccgatcactttaatttcatcatatatttttgtaggcattatgccatta 32607653  T
Q  107 tatattattaacttgggtgttgtgagtttgttc 139  Q
    |||  ||||||| ||| ||||||||||||||||    
T  32607654 tatgctattaacctggatgttgtgagtttgttc 32607686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 32 - 139
Target Start/End: Original strand, 9998571 - 9998678
Alignment:
Q  32 acgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattatatattattaacttgggtgttgtga 131  Q
    ||||||||||||| ||||||||  ||||  ||||| |||  ||| |||||||| ||||||| ||||||||| || |||  |||||||||||||| |||||    
T  9998571 acgttgcagatccagaagcatgggtatttcggtgacttaagttttatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctgtga 9998670  T
Q  132 gtttgttc 139  Q
    ||||||||    
T  9998671 gtttgttc 9998678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 10108316 - 10108447
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||| | |||||||| |||  |||||||||||||| || |||||| ||||  || || |||  ||| |||||||| ||||||| ||||||||| || |    
T  10108316 attcaaccaatgatttgaacgataacgttgcagatccagatgcatgagtatttcggcgacttaagttttatcatattatttgtaggcattttgccgttgt 10108415  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    ||  |||||||||||||| |||||||||||||    
T  10108416 atgctattaacttgggtgctgtgagtttgttc 10108447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 46304528 - 46304397
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||| | ||||||| | || |||| |||||||||||||||||||  ||||  ||||| |||| ||| |||||||| | ||||| ||| ||||| || |    
T  46304528 attcaaccaatgatttaggcgtcaacattgcagatccggaagcatgggtatttcggtgacttaggttttatcatattatatgtaggcatgttgccgttgt 46304429  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    ||  |||||||||| |||||||||||||||||    
T  46304428 atgctattaacttgagtgttgtgagtttgttc 46304397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 6 - 100
Target Start/End: Original strand, 53508304 - 53508398
Alignment:
Q  6 agattcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttg 100  Q
    |||||||||| |||||||||||| |||| ||||| ||||  |||||||| |||||   |||||||||||| |||||||| ||||||| |||||||    
T  53508304 agattcaatcaatgatttggacgtcaactttgcacatccaaaagcatgagtattacaatgatttagattttatcatattatttgtaggcattttg 53508398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 54149080 - 54149202
Alignment:
Q  17 atgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattatatattatta 116  Q
    ||||||||| || ||||||||||||||||||||||||  ||||  ||||| || ||||| |||||||| ||||||| |||| || | || |||  |||||    
T  54149080 atgatttgggcgtcaacgttgcagatccggaagcatggctatttcggtgacttggattttatcatattatttgtaggcattatgtcgttgtatgctatta 54149179  T
Q  117 acttgggtgttgtgagtttgttc 139  Q
    || |||||| |||||||| ||||    
T  54149180 acctgggtgatgtgagttagttc 54149202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 9 - 140
Target Start/End: Original strand, 12116183 - 12116316
Alignment:
Q  9 ttcaatcgatgatttggacgccaacgttgcagatccggaagca-tgaatattatggtgatttagatttcatcatat-tttttgtagtcattttgccatta 106  Q
    ||||||| | ||||||  || |||||||||||||||||| ||| || ||||| | || | ||  |||||||||||| ||||||||| |||| |||| |||    
T  12116183 ttcaatcaaagatttgagcgtcaacgttgcagatccggaggcaatggatattctagtcactttaatttcatcatatatttttgtaggcattatgccgtta 12116282  T
Q  107 tatattattaacttgggtgttgtgagtttgttct 140  Q
    |||  ||||||||||| |||||||||||||||||    
T  12116283 tatgctattaacttggatgttgtgagtttgttct 12116316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 8 - 100
Target Start/End: Complemental strand, 36461439 - 36461347
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttg 100  Q
    |||||| | |||||||||||| ||||||| |||||| |||||||||| ||||  || ||||||| ||| |||||||| ||||||| |||||||    
T  36461439 attcaagcaatgatttggacgtcaacgttacagatctggaagcatgagtatttcggcgatttaggttttatcatattatttgtagccattttg 36461347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 31 - 138
Target Start/End: Complemental strand, 7792172 - 7792065
Alignment:
Q  31 aacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattatatattattaacttgggtgttgtg 130  Q
    |||||||||||  |  |||||||| |||| | ||||||||||||| |||||||| ||||||| |||||||||||| ||   ||||||||| ||||||  |    
T  7792172 aacgttgcagaaacaaaagcatgagtattctagtgatttagattttatcatattatttgtaggcattttgccattgtaagctattaacttaggtgttaag 7792073  T
Q  131 agtttgtt 138  Q
    ||||||||    
T  7792072 agtttgtt 7792065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 38545879 - 38546010
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||| | ||||||||| || |||||||| ||||||| || ||||   |||  ||||| |||| ||| |||||||| ||||||| ||||||||| || |    
T  38545879 attcaaccaatgatttgggcgtcaacgttgaagatccgaaaacatgcgaatttaggtgacttaggttttatcatattatttgtaggcattttgccgtttt 38545978  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    ||  |||||||||||||| || ||||||||||    
T  38545979 atgctattaacttgggtggtgggagtttgttc 38546010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 3085300 - 3085178
Alignment:
Q  17 atgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattatatattatta 116  Q
    |||||||| ||| ||||||||||||| || ||| | |  |||| || ||||||||| ||||||||||| ||||||| ||||||||| || ||   |||||    
T  3085300 atgatttgaacgtcaacgttgcagattcgaaagtaggggtattctgatgatttagaattcatcatattatttgtaggcattttgccgttgtaggctatta 3085201  T
Q  117 acttgggtgttgtgagtttgttc 139  Q
    | |||||||  ||||||||||||    
T  3085200 aattgggtgcagtgagtttgttc 3085178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 44 - 139
Target Start/End: Original strand, 27856279 - 27856376
Alignment:
Q  44 cggaagcatga--atattatggtgatttagatttcatcatattttttgtagtcattttgccattatatattattaacttgggtgttgtgagtttgttc 139  Q
    |||||||||||  ||||| ||||||||||||||| |||||||| ||||||| |||||| || ||  ||  ||||||||||| || |||||||||||||    
T  27856279 cggaagcatgagtatattctggtgatttagattttatcatattatttgtaggcatttttccgttgcatgctattaacttggatgatgtgagtttgttc 27856376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 25631516 - 25631383
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagc-atgaatattatggtgatttagatttcatcatat-tttttgtagtcattttgccatt 105  Q
    |||||||| | ||||||| || |||||||| ||||||||| || ||| |||||  ||| | ||  |||| ||||||| ||||||||| |||| |||| ||    
T  25631516 attcaatcaaagatttgggcgtcaacgttgtagatccggatgccatggatattccggtcactttaattttatcatatatttttgtaggcattatgccgtt 25631417  T
Q  106 atatattattaacttgggtgttgtgagtttgttc 139  Q
    |||| |||||||||||| || |||||||||||||    
T  25631416 atatgttattaacttggatgatgtgagtttgttc 25631383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 62 - 139
Target Start/End: Original strand, 37040903 - 37040979
Alignment:
Q  62 ggtgatttagatttcatcatattttttgtagtcattttgccattatatattattaacttgggtgttgtgagtttgttc 139  Q
    ||||| |||||||| ||||||||  |||||| ||||||| |||| ||| ||||||||||||||| |||||||||||||    
T  37040903 ggtgacttagatttaatcatattagttgtag-cattttgtcattttatgttattaacttgggtgctgtgagtttgttc 37040979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 9 - 138
Target Start/End: Original strand, 53099871 - 53099998
Alignment:
Q  9 ttcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattata 108  Q
    ||||||| ||||||||| || ||||||| || |||||||||||||   |||   |||| |||||||| | |||||| ||||||| ||||||| | || ||    
T  53099871 ttcaatcaatgatttgggcgtcaacgttacatatccggaagcatgtgaattccagtgacttagattttagcatattatttgtag-cattttgtcgttgta 53099969  T
Q  109 tattattaacttgggtgttgtgagtttgtt 138  Q
    | |||||||||| |||||||||||||||||    
T  53099970 tgttattaactt-ggtgttgtgagtttgtt 53099998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 12050656 - 12050525
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||| | |||||||||  | ||||||||||||||||||| ||||| ||||  || || |||| ||| |||||||| ||||||  ||||||| | || |    
T  12050656 attcaaccaatgatttgggtgtcaacgttgcagatccggaaacatgagtatttcggggacttaggttttatcatattatttgtaagcattttgtcgttgt 12050557  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    || |||||||||||  |  |||||||||||||    
T  12050556 atgttattaacttgaatagtgtgagtttgttc 12050525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 32701571 - 32701702
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||||| ||||||||| || |||||||| |||||||||||||||  ||||  || || |||  ||| || ||||| | ||||| ||||||||| || |    
T  32701571 attcaatcaatgatttgggcgtcaacgttgtagatccggaagcatgggtatttcggcgacttaagttttatgatattatctgtaggcattttgccgttgt 32701670  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    ||  ||| ||||||| || |||||||||||||    
T  32701671 atgctatgaacttggatgctgtgagtttgttc 32701702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 47042056 - 47041925
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||| | ||| ||||| || |||||||| |||||||||||||||   ||| |||||| |||| |||||||||||| ||||||| | ||||  | || |    
T  47042056 attcaaccaatggtttgggcgtcaacgttgaagatccggaagcatgtgaattttggtgacttaggtttcatcatattatttgtaggcgttttatcgtttt 47041957  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    ||  ||||||||| |||| | |||||||||||    
T  47041956 atgctattaacttaggtgatatgagtttgttc 47041925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 47896232 - 47896362
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||| | ||||||||| ||  || |||||| |||||||||||||||||||  | | | |||| ||| ||| |||| ||||||| ||||||| | || |    
T  47896232 attcaaccaatgatttgggcgtaaatgttgcatatccggaagcatgaatatttcgataacttaggttttatcttattatttgtag-cattttgtcgttgt 47896330  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    ||  |||||||||| |||||||||||||||||    
T  47896331 atgctattaacttgagtgttgtgagtttgttc 47896362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 6 - 44
Target Start/End: Complemental strand, 12947284 - 12947246
Alignment:
Q  6 agattcaatcgatgatttggacgccaacgttgcagatcc 44  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  12947284 agattcaatcgatgatttggacgccaacattgcagatcc 12947246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 55 - 113
Target Start/End: Original strand, 32246550 - 32246608
Alignment:
Q  55 atattatggtgatttagatttcatcatattttttgtagtcattttgccattatatatta 113  Q
    ||||| ||||||||||||||| |||||||| ||||||| || ||||| |||||||||||    
T  32246550 atattctggtgatttagattttatcatattatttgtaggcaatttgctattatatatta 32246608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 8 - 141
Target Start/End: Original strand, 19339256 - 19339388
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||||| ||||||| |  | ||| ||||||||||| ||||||||  |||| | |||| |||||||| |||||||| | ||||| ||||||| | || |    
T  19339256 attcaatcaatgatttaggtgtcaatgttgcagatccagaagcatgggtatt-tcgtgacttagattttatcatattatctgtaggcattttgtcgttgt 19339354  T
Q  108 atattattaacttgggtgttgtgagtttgttctc 141  Q
    || ||||||||||||||  | | |||||||||||    
T  19339355 atgttattaacttgggtactttaagtttgttctc 19339388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 139
Target Start/End: Complemental strand, 44907377 - 44907256
Alignment:
Q  20 atttggacgccaacgttgcagatccggaagcat-gaatattatggtgatttagatttcatcatat-tttttgtagtcattttgccattatatattattaa 117  Q
    |||||| || |||||||||||||||||| |||  |||||||  ||| | ||  |||||||||||| ||||||||| |||| || | ||||||  ||||||    
T  44907377 atttgggcgtcaacgttgcagatccggaggcaacgaatattccggtcactttaatttcatcatatatttttgtaggcattatgtcgttatatgctattaa 44907278  T
Q  118 cttgggtgttgtgagtttgttc 139  Q
     |||| ||||||||||||||||    
T  44907277 tttggatgttgtgagtttgttc 44907256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 138
Target Start/End: Complemental strand, 26739367 - 26739235
Alignment:
Q  6 agattcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccatt 105  Q
    |||||||| | ||||||| |||| || |||||||||||  ||| | ||  ||||||| | |||||||||| |||||||| ||||||  ||||||| | ||    
T  26739367 agattcaaccaatgattttgacgtcagcgttgcagatcaagaatcgtgggtattatgataatttagattttatcatattatttgtaagcattttggcgtt 26739268  T
Q  106 atatattattaacttgggtgttgtgagtttgtt 138  Q
     |||  |||||||||| |||| || ||||||||    
T  26739267 gtatgctattaacttgagtgtcgtaagtttgtt 26739235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 72 - 139
Target Start/End: Original strand, 36906271 - 36906339
Alignment:
Q  72 atttcatcatat-tttttgtagtcattttgccattatatattattaacttgggtgttgtgagtttgttc 139  Q
    |||||||||||| ||||||||| |||| |||| ||||||  ||||||||||| || |||||||||||||    
T  36906271 atttcatcatatatttttgtaggcattatgccgttatatgctattaacttggatgatgtgagtttgttc 36906339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 56 - 139
Target Start/End: Complemental strand, 7887411 - 7887329
Alignment:
Q  56 tattatggtgatttagatttcatcatattttttgtagtcattttgccattatatattattaacttgggtgttgtgagtttgttc 139  Q
    |||| ||||||||||| |||  ||||||  ||||||| ||||||| |||||||| ||||| |||||  ||||||||||||||||    
T  7887411 tattttggtgatttagttttagtcatatcatttgtag-cattttgtcattatatgttatttacttgaatgttgtgagtttgttc 7887329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 12149792 - 12149661
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||| | ||||||||| || |||||||||||||| ||||| |||  ||||  ||||| |||  ||| ||||||||  | |||| ||||||||| || |    
T  12149792 attcaaccaatgatttgggcgtcaacgttgcagatctggaagaatgggtatttcggtgaattatgttttatcatattaatcgtaggcattttgccgttgt 12149693  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    ||  |||||| ||||||  |||||||||||||    
T  12149692 atgctattaagttgggtactgtgagtttgttc 12149661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 92
Target Start/End: Original strand, 18011101 - 18011184
Alignment:
Q  9 ttcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtag 92  Q
    ||||||| || | |||| || ||||||||||||||| ||||||||||||||   |||| |||||| | |||||||| |||||||    
T  18011101 ttcaatcaatcacttgggcgtcaacgttgcagatccagaagcatgaatatttcagtgacttagatataatcatattatttgtag 18011184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 68 - 139
Target Start/End: Complemental strand, 20987703 - 20987632
Alignment:
Q  68 ttagatttcatcatattttttgtagtcattttgccattatatattattaacttgggtgttgtgagtttgttc 139  Q
    |||||||| |||||||| ||||||| ||||||||  || |||  ||||||||||| || |||||||||||||    
T  20987703 ttagattttatcatattatttgtaggcattttgcagttgtatgctattaacttggatgatgtgagtttgttc 20987632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 104 - 139
Target Start/End: Original strand, 25849991 - 25850026
Alignment:
Q  104 ttatatattattaacttgggtgttgtgagtttgttc 139  Q
    ||||||| ||||||||||||||||||||||||||||    
T  25849991 ttatatactattaacttgggtgttgtgagtttgttc 25850026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 68 - 139
Target Start/End: Complemental strand, 42455768 - 42455697
Alignment:
Q  68 ttagatttcatcatattttttgtagtcattttgccattatatattattaacttgggtgttgtgagtttgttc 139  Q
    |||||||| ||||||||  |||||||||||||| | || |||  ||||||||| | ||||||||||||||||    
T  42455768 ttagatttaatcatattagttgtagtcattttgtcgttgtatgctattaacttcgatgttgtgagtttgttc 42455697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 135
Target Start/End: Original strand, 43017037 - 43017095
Alignment:
Q  77 atcatattttttgtagtcattttgccattatatattattaacttgggtgttgtgagttt 135  Q
    |||||||| ||||||| ||||||||| || |||  ||||||||| ||||||||||||||    
T  43017037 atcatattatttgtaggcattttgccgttgtatgctattaacttaggtgttgtgagttt 43017095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 135
Target Start/End: Complemental strand, 44959912 - 44959854
Alignment:
Q  77 atcatattttttgtagtcattttgccattatatattattaacttgggtgttgtgagttt 135  Q
    |||||||| ||||||| |||||||||||| |||  ||||||||||| || |||||||||    
T  44959912 atcatattatttgtaggcattttgccattgtatgctattaacttggatgctgtgagttt 44959854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 98
Target Start/End: Original strand, 45424878 - 45424968
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattt 98  Q
    |||||||| ||||||||| || |||| |||||||||||||| ||||  || |  ||||| || ||||| |||||||| ||||||| |||||    
T  45424878 attcaatcaatgatttgggcgtcaacattgcagatccggaatcatgggtacttcggtgacttcgattttatcatattatttgtaggcattt 45424968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 33 - 139
Target Start/End: Original strand, 46220768 - 46220874
Alignment:
Q  33 cgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattatatattattaacttgggtgttgtgag 132  Q
    ||||||||||||| ||||||   ||||   ||||||||||||| |||||||| ||||||| |||||| || || |||   ||||| ||||||| || |||    
T  46220768 cgttgcagatccgaaagcattggtatttcagtgatttagattttatcatattatttgtaggcattttaccgttgtatgccattaatttgggtgctgcgag 46220867  T
Q  133 tttgttc 139  Q
    |||||||    
T  46220868 tttgttc 46220874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 50 - 100
Target Start/End: Original strand, 51487217 - 51487267
Alignment:
Q  50 catgaatattatggtgatttagatttcatcatattttttgtagtcattttg 100  Q
    ||||| |||| ||||||||||||||| |||||||| ||||||| |||||||    
T  51487217 catgagtattctggtgatttagattttatcatattatttgtagacattttg 51487267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 139
Target Start/End: Original strand, 4169929 - 4170001
Alignment:
Q  64 tgatttagatttcatcatattttttgtagtcattttgccattatatattattaacttgggtgttgtgagtttgttc 139  Q
    ||||||| |||| |||||||| ||||||| |||||||||   |||||||||||||||  |||||  ||||||||||    
T  4169929 tgatttaaattttatcatattatttgtagacattttgcc---atatattattaacttaagtgtttagagtttgttc 4170001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 25162520 - 25162653
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagca-tgaatattatggtgatttagatttcatcatat-tttttgtagtcattttgccatt 105  Q
    |||||||| | ||||||  || |||||||||||||||||| | | || |||||  ||| | ||  |||| ||||||| ||||||||| |||| || | ||    
T  25162520 attcaatcaaagatttgaccgtcaacgttgcagatccggaggtaatggatattccggtcactttaattttatcatatatttttgtaggcattatgtcgtt 25162619  T
Q  106 atatattattaacttgggtgttgtgagtttgttc 139  Q
    ||||  ||||||||||| ||||||||||||||||    
T  25162620 atatgctattaacttggatgttgtgagtttgttc 25162653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 29503545 - 29503678
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaag-catgaatattatggtgatttagatttcatcatat-tttttgtagtcattttgccatt 105  Q
    |||||||| | ||||||| || |||||||||||||||||| | |||| |||||  ||| | ||  |||| ||||||| ||||||||| |||| |||| ||    
T  29503545 attcaatcaaagatttgggcgtcaacgttgcagatccggaggccatggatattccggtcactttaattttatcatatatttttgtaggcattatgccgtt 29503644  T
Q  106 atatattattaacttgggtgttgtgagtttgttc 139  Q
    ||||  ||||||||||| |  ||||||| |||||    
T  29503645 atatgctattaacttggattctgtgagtatgttc 29503678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 135
Target Start/End: Complemental strand, 39917388 - 39917259
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaag-catgaatattatggtgatttagatttcatcatat-tttttgtagtcattttgccatt 105  Q
    |||||||| | ||||||  || |||||||||||||||||| | |||| |||||   || | ||  |||| ||||||| ||||||||| |||| |||| ||    
T  39917388 attcaatcaaagatttgaccgtcaacgttgcagatccggaggtcatggatattccagtcactttaattttatcatatatttttgtaggcattatgccttt 39917289  T
Q  106 atatattattaacttgggtgttgtgagttt 135  Q
    ||||  ||||||||||| ||||||||||||    
T  39917288 atatgctattaacttggatgttgtgagttt 39917259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 109
Target Start/End: Original strand, 48199861 - 48199958
Alignment:
Q  12 aatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattatat 109  Q
    |||| |||||||||||| | |||||||| |||| ||||||||   |||  ||||| ||||| || |||||||| | ||||| ||||||||| ||||||    
T  48199861 aatcaatgatttggacgtcgacgttgcaaatccagaagcatgtgcatttcggtgacttagaatttatcatattatctgtaggcattttgcctttatat 48199958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 50611408 - 50611275
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaag-catgaatattatggtgatttagatttcatcatat-tttttgtagtcattttgccatt 105  Q
    |||||||||| ||||||| || |||||||||||||||||| | |||| |||||  ||| | ||| |||| ||||||| ||||||||| |||| | |  ||    
T  50611408 attcaatcgaagatttgggcgtcaacgttgcagatccggaggccatggatattcgggtcacttaaattttatcatatgtttttgtaggcattatacagtt 50611309  T
Q  106 atatattattaacttgggtgttgtgagtttgttc 139  Q
    ||||  ||||||||||| || | || ||||||||    
T  50611308 atatgctattaacttggatgatatgggtttgttc 50611275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 72 - 135
Target Start/End: Complemental strand, 38854961 - 38854897
Alignment:
Q  72 atttcatcatat-tttttgtagtcattttgccattatatattattaacttgggtgttgtgagttt 135  Q
    |||| ||||||| |||||||||||||| | || |||||| |||||||||||| || |||||||||    
T  38854961 attttatcatatatttttgtagtcattataccgttatatgttattaacttggatgatgtgagttt 38854897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 46178653 - 46178785
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatat-tttttgtagtcattttgccatta 106  Q
    |||||||| | || |||| || |||||||||||||||||| |||||  ||||  ||| | ||  |||| ||||||| ||||||||  |||| || | |||    
T  46178653 attcaatcaaagaattgggcgtcaacgttgcagatccggaggcatgggtattccggtcacttttattttatcatatatttttgtaagcattatgtcgtta 46178752  T
Q  107 tatattattaacttgggtgttgtgagtttgttc 139  Q
    |||  ||||||||||| || |||||||||||||    
T  46178753 tatgctattaacttggatgatgtgagtttgttc 46178785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 30 - 139
Target Start/End: Complemental strand, 49552192 - 49552081
Alignment:
Q  30 caacgttgcagatccggaagc-atgaatattatggtga-tttagatttcatcatat-tttttgtagtcattttgccattatatattattaacttgggtgt 126  Q
    |||||||||||||||||| || ||| |||||  ||||| ||||| ||| ||||||| ||||||||| |||| |||| ||||||  ||||||||||| ||     
T  49552192 caacgttgcagatccggaggccatggatattccggtgactttagtttt-atcatatatttttgtaggcattatgccgttatatgctattaacttggatgc 49552094  T
Q  127 tgtgagtttgttc 139  Q
    ||| |||||||||    
T  49552093 tgtaagtttgttc 49552081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 80; Significance: 2e-37; HSPs: 83)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 36204387 - 36204256
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||||| |||||||||||| ||||||||||||||||||||   ||||||| ||||||||||||||| |||||||| |||||||  |||||||||||||    
T  36204387 attcaatcaatgatttggacgtcaacgttgcagatccggaagagagaatattctggtgatttagattttatcatattatttgtagatattttgccattat 36204288  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    || ||||||| |||| ||||||||||||||||    
T  36204287 atgttattaatttggatgttgtgagtttgttc 36204256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 6 - 122
Target Start/End: Original strand, 52944410 - 52944526
Alignment:
Q  6 agattcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccatt 105  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||  |||| |||||||||||||||||||||||||||||||| |||||||   ||    
T  52944410 agattcaatcgatgatttggacgtcaacgttgcagatccggaagcatgggtattctggtgatttagatttcatcatattttttgtaggcattttgtagtt 52944509  T
Q  106 atatattattaacttgg 122  Q
    ||||  |||||||||||    
T  52944510 atatgctattaacttgg 52944526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 21686250 - 21686119
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||| | |||||||||||| ||||||||||||||||||||||||| |||| ||||||||||| ||| |||||||| ||||||| |||||||||  | |    
T  21686250 attcaagcaatgatttggacgtcaacgttgcagatccggaagcatgagtattttggtgatttaggttttatcatattatttgtaggcattttgccgctgt 21686151  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    || ||||||||||||||| |||||||||||||    
T  21686150 atgttattaacttgggtgctgtgagtttgttc 21686119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 36161812 - 36161943
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||||| |||||||||||||||||||| |||||||| || ||||| |||| | ||||||||||||| |||||||| ||||||| ||||| | | ||||    
T  36161812 attcaatcaatgatttggacgccaacgttacagatccgaaaacatgagtattttcgtgatttagattttatcatattatttgtaggcatttggtcgttat 36161911  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    || |||||||||||||||||||||||||||||    
T  36161912 atgttattaacttgggtgttgtgagtttgttc 36161943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 6 - 139
Target Start/End: Complemental strand, 47320422 - 47320289
Alignment:
Q  6 agattcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccatt 105  Q
    |||||||||| |||||||||||| ||||||||||||||| |||||| || |||| ||||||||||||||  |||||||| ||||||| ||||||||| ||    
T  47320422 agattcaatcaatgatttggacgtcaacgttgcagatccagaagcaagagtattctggtgatttagattatatcatattatttgtaggcattttgccgtt 47320323  T
Q  106 atatattattaacttgggtgttgtgagtttgttc 139  Q
     |||  |||||||||||||| |||||||||||||    
T  47320322 gtatgctattaacttgggtgctgtgagtttgttc 47320289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 28857503 - 28857633
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    ||||||| ||||||||||||||||||||| ||||||||||||||||  | || ||||||||||||||||||||||||||||||||  |||||||| ||||    
T  28857503 attcaattgatgatttggacgccaacgtttcagatccggaagcatggtt-ttctggtgatttagatttcatcatattttttgtaggtattttgcccttat 28857601  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    ||  |||||||||||  | |||||||||||||    
T  28857602 atgctattaacttggcagctgtgagtttgttc 28857633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 31891295 - 31891164
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||| | ||||||||| || |||||||||| |||| ||||||||| |||| |||||||||||||||||| ||||| ||||||| ||||||||| || |    
T  31891295 attcaaaccatgatttgggcgtcaacgttgcaaatccagaagcatgagtattctggtgatttagatttcattatattatttgtaggcattttgccgttgt 31891196  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    ||  ||||||||||||||||||||||||||||    
T  31891195 atgctattaacttgggtgttgtgagtttgttc 31891164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 2520889 - 2521011
Alignment:
Q  17 atgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattatatattatta 116  Q
    |||||||||||| ||||||||||||||||||||||||  ||||  |||||||||||||| ||| |||| ||||||| ||||||||| || |||  |||||    
T  2520889 atgatttggacgtcaacgttgcagatccggaagcatgggtatttcggtgatttagattttatcgtattatttgtaggcattttgccgttgtatgctatta 2520988  T
Q  117 acttgggtgttgtgagtttgttc 139  Q
    |||||||||||||||||||||||    
T  2520989 acttgggtgttgtgagtttgttc 2521011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 6 - 139
Target Start/End: Original strand, 22300948 - 22301082
Alignment:
Q  6 agattcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatatttttt-gtagtcattttgccat 104  Q
    ||||||||||||||||||||||||| |||||||||||||| || ||||| |||| |||||||||||||||||| |||||||||  |||  ||||||||      
T  22300948 agattcaatcgatgatttggacgccgacgttgcagatccgaaatcatgagtattttggtgatttagatttcattatattttttcataggtattttgccgc 22301047  T
Q  105 tatatattattaacttgggtgttgtgagtttgttc 139  Q
    |||||  ||||||||||| ||||||||||||||||    
T  22301048 tatatgctattaacttggatgttgtgagtttgttc 22301082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 19853520 - 19853389
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||| | |||||||||||| |||||||||||||||||||||||| |||||  ||||| |||  ||| |||||||| ||| ||| ||||||||| || |    
T  19853520 attcaaccaatgatttggacgtcaacgttgcagatccggaagcatggatatttcggtgacttaagttttatcatattatttctaggcattttgccgttgt 19853421  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    ||  ||||||||||||||||||||||||||||    
T  19853420 atgctattaacttgggtgttgtgagtttgttc 19853389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 8 - 138
Target Start/End: Original strand, 18935883 - 18936013
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||||  ||||||||| |  |||||||||||||||  ||||||   |||| |||||||||||||||||||||||| ||||||| |||||||| ||| |    
T  18935883 attcaattaatgatttgggcatcaacgttgcagatccaaaagcataggtattctggtgatttagatttcatcatattatttgtaggcattttgctattgt 18935982  T
Q  108 atattattaacttgggtgttgtgagtttgtt 138  Q
    |  ||||||||||||||||||||||||||||    
T  18935983 acgttattaacttgggtgttgtgagtttgtt 18936013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 22611284 - 22611415
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||| | |||||||||||| ||||||||||||||||||||||||| ||||  ||||| |||  ||| |||||||| ||||||| ||||||||| || |    
T  22611284 attcaaccaatgatttggacgtcaacgttgcagatccggaagcatgagtatttcggtgacttaagttttatcatattatttgtaggcattttgccgttgt 22611383  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    ||  |||||| ||||||| |||||||||||||    
T  22611384 atggtattaaattgggtgctgtgagtttgttc 22611415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 36194810 - 36194940
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||||| |||||||| ||  ||| ||||||||||| ||| ||||  |||| |||||||||||||||||||||||| ||||||| ||||||||| || |    
T  36194810 attcaatcaatgatttg-acatcaaagttgcagatccagaaacatgggtattctggtgatttagatttcatcatattatttgtaggcattttgccgttgt 36194908  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    ||  ||||||||||| ||||||||||||||||    
T  36194909 atgctattaacttggatgttgtgagtttgttc 36194940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 8 - 134
Target Start/End: Original strand, 53811129 - 53811255
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||| | |||||||||||| ||||||||||||||||||||||||| ||||  ||||| |||  ||| |||||||| ||||||| ||||||| | || |    
T  53811129 attcaaccaatgatttggacgtcaacgttgcagatccggaagcatgagtatttcggtgacttaagttttatcatattatttgtaggcattttggcgttgt 53811228  T
Q  108 atattattaacttgggtgttgtgagtt 134  Q
    ||  |||||||||||||||||||||||    
T  53811229 atgctattaacttgggtgttgtgagtt 53811255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 8 - 101
Target Start/End: Complemental strand, 10258904 - 10258811
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgc 101  Q
    |||||||| ||||||||| ||||||||||||| | ||||||||||||||||| |||||| |||||||| |||||||| ||||||| ||||||||    
T  10258904 attcaatcaatgatttgggcgccaacgttgcatacccggaagcatgaatattttggtgacttagattttatcatattatttgtagacattttgc 10258811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 27652045 - 27652175
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||||| |||||||||    ||||||||||||||| ||||||||  |||| | ||| |||||||||||||||||| ||||||| ||||||||| || |    
T  27652045 attcaatcaatgatttgggtatcaacgttgcagatccagaagcatgggtattctagtg-tttagatttcatcatattatttgtagacattttgccgttgt 27652143  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    ||  |||||||||| |||||||||||||||||    
T  27652144 atgctattaacttgagtgttgtgagtttgttc 27652175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 29960957 - 29960826
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||| ||||||||| | |  ||||||||||||||||||| ||| |||||| | ||||||||||||| |||||| | ||||||| ||||||||| || |    
T  29960957 attcaaccgatgattttggcatcaacgttgcagatccggaaacataaatattttagtgatttagattttatcatactatttgtaggcattttgccgttgt 29960858  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    ||  | |||||||||||| |||||||||||||    
T  29960857 atgcttttaacttgggtgctgtgagtttgttc 29960826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 9714013 - 9714142
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||||| | ||||||| || |||||||||||||| |||||| |  ||||| | |||| |||||||| |||||||| ||||||| ||||||| |||| |    
T  9714013 attcaatcaacgatttgggcgtcaacgttgcagatctggaagcgt--atattctagtgaattagattttatcatattatttgtaggcattttgtcattgt 9714110  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    || || |||||||| |||||||||||||||||    
T  9714111 atgttgttaacttgagtgttgtgagtttgttc 9714142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 31 - 139
Target Start/End: Complemental strand, 51888196 - 51888088
Alignment:
Q  31 aacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattatatattattaacttgggtgttgtg 130  Q
    ||||||||| ||| | |||||||| |||| ||||||||||||||| |||||||| ||||||| | ||||||||||  ||  ||||||||| |||||||||    
T  51888196 aacgttgcatatctgaaagcatgagtattctggtgatttagattttatcatattatttgtaggcgttttgccattgcatgctattaacttaggtgttgtg 51888097  T
Q  131 agtttgttc 139  Q
    |||||||||    
T  51888096 agtttgttc 51888088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 8 - 138
Target Start/End: Original strand, 35348408 - 35348538
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||| | ||||| |||| | ||||||||||||||||||||||||   |||    ||| |||| ||| |||||||| ||||||| |||||||||||| |    
T  35348408 attcaaccaatgatctggatgtcaacgttgcagatccggaagcatgtgaatttcaatgacttaggttttatcatattatttgtaggcattttgccatttt 35348507  T
Q  108 atattattaacttgggtgttgtgagtttgtt 138  Q
    ||  |||||||||||||||||||||||||||    
T  35348508 atgctattaacttgggtgttgtgagtttgtt 35348538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 43853553 - 43853675
Alignment:
Q  17 atgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattatatattatta 116  Q
    |||||||| ||| ||||||||||||| ||||||||||  ||||| | |||||||||||| |||||||| |||||   |||||||   || ||| ||||||    
T  43853553 atgatttgtacgtcaacgttgcagattcggaagcatgcgtattaagatgatttagattttatcatattatttgtcagcattttgttgttgtatgttatta 43853652  T
Q  117 acttgggtgttgtgagtttgttc 139  Q
    |||||| ||||||||||||||||    
T  43853653 acttggatgttgtgagtttgttc 43853675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 8 - 141
Target Start/End: Original strand, 32766615 - 32766748
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||||| |||||||||||| ||| ||||||||||||||| ||||  ||||  ||||| |||  ||| |||||||| ||||||| |||| || | || |    
T  32766615 attcaatcaatgatttggacgtcaatgttgcagatccggaaacatgggtatttcggtgacttaagttttatcatattatttgtaggcattatgtcgttgt 32766714  T
Q  108 atattattaacttgggtgttgtgagtttgttctc 141  Q
    ||  |||||||||||||| |||||||||||||||    
T  32766715 atgctattaacttgggtgctgtgagtttgttctc 32766748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 19 - 139
Target Start/End: Original strand, 13634227 - 13634347
Alignment:
Q  19 gatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattatatattattaac 118  Q
    |||||||||| ||||||||||||||||||| ||||  ||||   ||||||||| ||| ||| |||| |||||||| |||||||| || |||  |||||||    
T  13634227 gatttggacgtcaacgttgcagatccggaaacatgggtatttcagtgatttaggttttatcttattatttgtagttattttgccgttgtatgctattaac 13634326  T
Q  119 ttgggtgttgtgagtttgttc 139  Q
    ||||||| ||||| |||||||    
T  13634327 ttgggtgctgtgaatttgttc 13634347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 43510306 - 43510428
Alignment:
Q  17 atgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattatatattatta 116  Q
    |||||||||||| ||| ||||||||||| ||||||||  ||||  ||||| |||  ||| |||||||| ||||||| ||||||| | || ||| | ||||    
T  43510306 atgatttggacgtcaatgttgcagatcctgaagcatgggtatttcggtgacttaagttttatcatattatttgtaggcattttgtcgttgtatgtcatta 43510405  T
Q  117 acttgggtgttgtgagtttgttc 139  Q
    ||||||||| |||||||||||||    
T  43510406 acttgggtgctgtgagtttgttc 43510428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 9 - 125
Target Start/End: Complemental strand, 6155233 - 6155114
Alignment:
Q  9 ttcaatcgatgatttggacgccaacgttgcagatccggaagcatga---atattatggtgatttagatttcatcatattttttgtagtcattttgccatt 105  Q
    ||||||||||||||| ||||  |||||||||||||||||||||  |   ||||| ||||||||||||||  |||||||| ||||||| ||||||| | ||    
T  6155233 ttcaatcgatgatttagacgtaaacgttgcagatccggaagcaacatagatattctggtgatttagattctatcatattatttgtaggcattttgtcgtt 6155134  T
Q  106 atatattattaacttgggtg 125  Q
     |||  ||||||||||||||    
T  6155133 gtatgctattaacttgggtg 6155114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 53 - 137
Target Start/End: Complemental strand, 52933912 - 52933828
Alignment:
Q  53 gaatattatggtgatttagatttcatcatattttttgtagtcattttgccattatatattattaacttgggtgttgtgagtttgt 137  Q
    ||||||||||||||||||||||| |||||||| |||||||  |||||||  || ||| ||||||||||| ||| |||||||||||    
T  52933912 gaatattatggtgatttagattttatcatattatttgtaggtattttgcttttgtatgttattaacttgagtgatgtgagtttgt 52933828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 8 - 136
Target Start/End: Complemental strand, 56040654 - 56040526
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||| | ||||||||| || ||||||||||||||| ||||||||  ||||  ||||| |||| ||| |||||||| ||||||| ||||||| | || |    
T  56040654 attcaaccaatgatttgggcggcaacgttgcagatccagaagcatgggtatttcggtgacttaggttttatcatattatttgtaggcattttgtcgttgt 56040555  T
Q  108 atattattaacttgggtgttgtgagtttg 136  Q
    ||  ||||||||||| || ||||||||||    
T  56040554 atgctattaacttggatgctgtgagtttg 56040526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 55 - 138
Target Start/End: Original strand, 37465630 - 37465713
Alignment:
Q  55 atattatggtgatttagatttcatcatattttttgtagtcattttgccattatatattattaacttgggtgttgtgagtttgtt 138  Q
    ||||| ||||||||||||||| |||||||| ||||||  ||||||| | || |||  |||||||||||||||||||||||||||    
T  37465630 atattctggtgatttagattttatcatattatttgtaagcattttgtcgttgtatgctattaacttgggtgttgtgagtttgtt 37465713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 8 - 138
Target Start/End: Complemental strand, 42032536 - 42032407
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||||  |||||||||  |||||||||| |||||| ||||||||| |||  || |||||||||| | |||||||| || |||| ||||||||| || |    
T  42032536 attcaataaatgatttgggtgccaacgttgaagatccagaagcatgagtatcttg-tgatttagatgttatcatattattggtagccattttgccgttgt 42032438  T
Q  108 atattattaacttgggtgttgtgagtttgtt 138  Q
    ||  ||||||||||  |||||||||||||||    
T  42032437 atgctattaacttgaatgttgtgagtttgtt 42032407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 45418613 - 45418746
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||||| ||||||||| |  |||||||||||||||| |||||  | ||||  ||||| |||||||| |||||||| ||||||| ||||||| | || |    
T  45418613 attcaatcaatgatttgggcatcaacgttgcagatccgaaagcactagtatttcggtgacttagattttatcatattatttgtaggcattttgtcgttgt 45418712  T
Q  108 atattattaacttgg--gtgttgtgagtttgttc 139  Q
    ||  ||||||| |||  |||||||||||||||||    
T  45418713 atgctattaacatgggtgtgttgtgagtttgttc 45418746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 30 - 139
Target Start/End: Complemental strand, 17949310 - 17949201
Alignment:
Q  30 caacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattatatattattaacttgggtgttgt 129  Q
    |||||||||||||||||||| |||  |||| || ||| |||| ||| |||||||| | ||||  |||||||   || ||| |||||||||||||||||||    
T  17949310 caacgttgcagatccggaagaatgggtattttgatgacttaggttttatcatattatatgtatgcattttgttcttgtatgttattaacttgggtgttgt 17949211  T
Q  130 gagtttgttc 139  Q
    ||||||||||    
T  17949210 gagtttgttc 17949201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 30 - 139
Target Start/End: Complemental strand, 17953162 - 17953053
Alignment:
Q  30 caacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattatatattattaacttgggtgttgt 129  Q
    |||||||||||||||||||| |||  |||| || ||| |||| ||| |||||||| | ||||  |||||||   || ||| |||||||||||||||||||    
T  17953162 caacgttgcagatccggaagaatgggtattttgatgacttaggttttatcatattatatgtatgcattttgttcttgtatgttattaacttgggtgttgt 17953063  T
Q  130 gagtttgttc 139  Q
    ||||||||||    
T  17953062 gagtttgttc 17953053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 44947511 - 44947644
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagc-atgaatattatggtgatttagatttcatcatat-tttttgtagtcattttgccatt 105  Q
    |||||||| | ||||||| || |||||||||||||||| | || ||| |||||  ||| | ||  |||| ||||||| ||||||||| |||| |||| ||    
T  44947511 attcaatcaaagatttgggcgtcaacgttgcagatccgaaggccatggatattccggtcactttaattttatcatatatttttgtaggcattgtgccgtt 44947610  T
Q  106 atatattattaacttgggtgttgtgagtttgttc 139  Q
    |||| |||||||||||| ||||||||||||||||    
T  44947611 atatgttattaacttggatgttgtgagtttgttc 44947644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 11 - 139
Target Start/End: Original strand, 21662541 - 21662669
Alignment:
Q  11 caatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattatata 110  Q
    ||||| ||||||||  || ||||||||||||||||||||||||  ||||  ||||| |||| ||| |||||||| ||||||| || ||||   || |||     
T  21662541 caatcaatgatttgagcgtcaacgttgcagatccggaagcatgggtatttcggtgacttaggttttatcatattatttgtagacactttggtgttgtatg 21662640  T
Q  111 ttattaacttgggtgttgtgagtttgttc 139  Q
     |||||||||| |||||||||| ||||||    
T  21662641 ctattaacttgagtgttgtgaggttgttc 21662669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 11 - 139
Target Start/End: Original strand, 21671305 - 21671433
Alignment:
Q  11 caatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattatata 110  Q
    ||||| ||||||||  || ||||||||||||||||||||||||  ||||  ||||| |||| ||| |||||||| ||||||| || ||||   || |||     
T  21671305 caatcaatgatttgagcgtcaacgttgcagatccggaagcatgggtatttcggtgacttaggttttatcatattatttgtagacactttggtgttgtatg 21671404  T
Q  111 ttattaacttgggtgttgtgagtttgttc 139  Q
     |||||||||| |||||||||| ||||||    
T  21671405 ctattaacttgagtgttgtgaggttgttc 21671433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 10496436 - 10496567
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||| | ||||||||| || |||| ||||||||||| |||||||  ||||  ||||| |||| ||| |||||||| ||||||| ||||||||  |  |    
T  10496436 attcaaccaatgatttgggcgtcaactttgcagatccgtaagcatgggtatttcggtgagttaggttttatcatattatttgtaggcattttgctgtcgt 10496535  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    ||  |||||||||||||| | |||||||||||    
T  10496536 atgctattaacttgggtgctttgagtttgttc 10496567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 24099075 - 24098946
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||| | |||||||||||| ||||||||||||||||||| ||||  ||||   |||| |||| ||| |||||||| ||||||| ||||||||| ||      
T  24099075 attcaagcaatgatttggacgtcaacgttgcagatccggaaacatgggtatttcagtgacttaggttttatcatattatttgtaggcattttgccgtt-g 24098977  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    ||  ||||||||| |||| |||||||||||||    
T  24098976 atgctattaactt-ggtgctgtgagtttgttc 24098946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 26633679 - 26633548
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||| | |||||||||||| ||| ||||||||||||||||||||||||||   |||| |||| ||| ||||||||   | ||| |||||| || || |    
T  26633679 attcaaccaatgatttggacgtcaatgttgcagatccggaagcatgaatatttctgtgacttaggttttatcatattaaatataggcattttaccgttgt 26633580  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    ||  ||||| ||| | ||||||||||||||||    
T  26633579 atgctattagcttagatgttgtgagtttgttc 26633548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 33921155 - 33921286
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||||| || |||||  || ||||||||||||||||||||||||  ||||   |||| |||||||| |||||||| ||||||| |||| |    || |    
T  33921155 attcaatcaataatttgagcgtcaacgttgcagatccggaagcatgggtatttcagtgacttagattttatcatattatttgtaggcattgtatagttgt 33921254  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    ||  ||||||||||| ||||||||||||||||    
T  33921255 atgctattaacttggatgttgtgagtttgttc 33921286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 53444219 - 53444350
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||| | ||||||||| || ||| |||| |||||||||||||||   |||  ||||| |||| ||| |||||||| |||||||  ||||| || || |    
T  53444219 attcaaccaatgatttgggcgtcaatgttgaagatccggaagcatgtgaatttcggtgacttaggttttatcatattatttgtagatatttttccgtttt 53444318  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    ||  |||||||||||||| |||||||||||||    
T  53444319 atgctattaacttgggtgctgtgagtttgttc 53444350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 12 - 139
Target Start/End: Original strand, 54021965 - 54022091
Alignment:
Q  12 aatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattatatat 111  Q
    |||| |||||||||| | |||||||||||||||| || |||| |||||  ||||| |||||||| |||||||| ||||||| || |||| | || ||| |    
T  54021965 aatcaatgatttggatgtcaacgttgcagatccgaaaacatggatatttcggtgacttagattttatcatattatttgtagaca-tttgtcgttgtatgt 54022063  T
Q  112 tattaacttgggtgttgtgagtttgttc 139  Q
    ||||||||||  |||| ||| |||||||    
T  54022064 tattaacttgaatgttatgaatttgttc 54022091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 8 - 102
Target Start/End: Complemental strand, 4142760 - 4142666
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgcc 102  Q
    |||||| | |||||||||||| ||||||||||||||| ||| ||||| ||||  ||||| |||  ||| |||||||| ||||||| |||||||||    
T  4142760 attcaaccaatgatttggacgtcaacgttgcagatccagaaacatgagtatttcggtgacttaagttttatcatattatttgtagacattttgcc 4142666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 8 - 138
Target Start/End: Original strand, 9048765 - 9048895
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||||| ||||||||  || |||||||||| ||| | || ||||  |||| || ||||||| |||| |||||||| ||||||| ||||||| | | ||    
T  9048765 attcaatcaatgatttgagcgtcaacgttgcaaatctgaaaacatgggtattctgatgatttaaattttatcatattatttgtaggcattttgtcgtcat 9048864  T
Q  108 atattattaacttgggtgttgtgagtttgtt 138  Q
     |  ||| |||||||||||||||||||||||    
T  9048865 gtgctataaacttgggtgttgtgagtttgtt 9048895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 9 - 139
Target Start/End: Complemental strand, 9145898 - 9145768
Alignment:
Q  9 ttcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattata 108  Q
    ||||||| ||||||| |||  |||||||  | |||||||||||||| |||| ||||||||||||||  |||||||| ||| ||| |||||| |  || ||    
T  9145898 ttcaatcaatgatttagacatcaacgttatatatccggaagcatgagtattctggtgatttagattgtatcatattgtttataggcattttacttttgta 9145799  T
Q  109 tattattaacttgggtgttgtgagtttgttc 139  Q
    |  |||||| || ||||||||||||| ||||    
T  9145798 tgctattaatttaggtgttgtgagttcgttc 9145768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 6 - 100
Target Start/End: Complemental strand, 33332579 - 33332485
Alignment:
Q  6 agattcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttg 100  Q
    |||||||||| |||||||||||| |||||||||||||||  ||| |||   ||| || |||||||||||| |||||||| ||||||  |||||||    
T  33332579 agattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcatattatttgtatgcattttg 33332485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 8 - 138
Target Start/End: Original strand, 36184632 - 36184762
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||||| ||||||| |  | |||||||| ||||| ||| |||| ||||||||||| | || ||||| |||||| | ||| ||| ||||||| | || |    
T  36184632 attcaatcaatgattttggtgtcaacgttgtagatcaggaggcataaatattatggtcactttgattttatcatactatttctaggcattttgtcgttgt 36184731  T
Q  108 atattattaacttgggtgttgtgagtttgtt 138  Q
    ||  ||||||||||| |||||||||||||||    
T  36184732 atgctattaacttggatgttgtgagtttgtt 36184762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 45228031 - 45227898
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccgga-agcatgaatattatggtgatttagatttcatcatat-tttttgtagtcattttgccatt 105  Q
    |||||||| | ||||||| || ||||||||||||| |||| | ||||||||||  ||| | ||  |||| ||||||| ||||||| | |||| |||  ||    
T  45228031 attcaatcaaagatttgggcgtcaacgttgcagattcggagaccatgaatattccggtcactttaattttatcatatatttttgtgggcattatgcggtt 45227932  T
Q  106 atatattattaacttgggtgttgtgagtttgttc 139  Q
    |||| |||||||||||| ||||||||||||||||    
T  45227931 atatgttattaacttggatgttgtgagtttgttc 45227898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 49410322 - 49410455
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagca-tgaatattatggtgatttagatttcatcatat-tttttgtagtcattttgccatt 105  Q
    |||||||| | ||||||| || |||||||||||||||||| ||  ||||||||   || | ||  |||| ||||||| ||||||||| |||| |||| ||    
T  49410322 attcaatcaaagatttgggcgtcaacgttgcagatccggaggccgtgaatattcctgtcactttaattttatcatatatttttgtaggcattatgccgtt 49410421  T
Q  106 atatattattaacttgggtgttgtgagtttgttc 139  Q
    |||| |||||||||||| || |||||||||||||    
T  49410422 atatgttattaacttggatgatgtgagtttgttc 49410455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 56 - 139
Target Start/End: Complemental strand, 1621469 - 1621388
Alignment:
Q  56 tattatggtgatttagatttcatcatattttttgtagtcattttgccattatatattattaacttgggtgttgtgagtttgttc 139  Q
    |||| |||||||||||||||||||||||| ||||||| |||||  || || |||   |||||||||| ||||||||||||||||    
T  1621469 tattctggtgatttagatttcatcatattatttgtagacattt--ccgttgtatgcaattaacttggatgttgtgagtttgttc 1621388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 72 - 139
Target Start/End: Complemental strand, 18138839 - 18138771
Alignment:
Q  72 atttcatcatat-tttttgtagtcattttgccattatatattattaacttgggtgttgtgagtttgttc 139  Q
    |||| ||||||| |||||||||||||| |||| ||||||  ||||||||||| ||||||||||||||||    
T  18138839 attttatcatatatttttgtagtcattatgccgttatatgctattaacttggatgttgtgagtttgttc 18138771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 8 - 100
Target Start/End: Complemental strand, 48351194 - 48351102
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttg 100  Q
    |||||| | |||||||||||| |  ||||||||||| |||||||||| ||||| |||||||||||||  ||||| || ||||||  |||||||    
T  48351194 attcaacctatgatttggacgtccgcgttgcagatctggaagcatgagtattacggtgatttagattgtatcatgttatttgtatgcattttg 48351102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 72 - 139
Target Start/End: Complemental strand, 49126052 - 49125984
Alignment:
Q  72 atttcatcatat-tttttgtagtcattttgccattatatattattaacttgggtgttgtgagtttgttc 139  Q
    |||| ||||||| |||||||||||||| |||| ||||||  ||||||||||| ||||||||||||||||    
T  49126052 attttatcatatatttttgtagtcattatgccgttatatgctattaacttggatgttgtgagtttgttc 49125984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 9 - 139
Target Start/End: Complemental strand, 53616639 - 53616507
Alignment:
Q  9 ttcaatcgatgatttggacgccaacgttgcagatccggaagca-tgaatattatggtgatttagatttcatcatat-tttttgtagtcattttgccatta 106  Q
    ||||||| | ||||||| || |||||||||||||||||| ||| || |||||  ||| | ||  ||||||| |||| ||||||||| |||| |||| |||    
T  53616639 ttcaatcaaagatttgggcgtcaacgttgcagatccggaggcaatggatattccggtcactttaatttcattatatatttttgtaggcattatgccgtta 53616540  T
Q  107 tatattattaacttgggtgttgtgagtttgttc 139  Q
    |||  ||||||||||| || |||||||||||||    
T  53616539 tatgctattaacttggatgatgtgagtttgttc 53616507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 7008986 - 7008866
Alignment:
Q  17 atgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattatatattatta 116  Q
    |||||||||| |  ||||||| ||||||| |||| ||| ||| |  |||||||| |||| |||||||| ||||| | ||||||||| || |||  |||||    
T  7008986 atgatttggatgttaacgttgtagatccgaaagcttgagtatca--gtgatttaaattttatcatattatttgtggacattttgccgttgtatgctatta 7008889  T
Q  117 acttgggtgttgtgagtttgttc 139  Q
    |||| ||||||||||||| ||||    
T  7008888 acttaggtgttgtgagttcgttc 7008866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 77 - 139
Target Start/End: Complemental strand, 11299949 - 11299887
Alignment:
Q  77 atcatattttttgtagtcattttgccattatatattattaacttgggtgttgtgagtttgttc 139  Q
    |||||||| || |||| ||||||| | || ||| |||||||||||||||||||||||||||||    
T  11299949 atcatattattcgtaggcattttggcgttttatgttattaacttgggtgttgtgagtttgttc 11299887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 6 - 139
Target Start/End: Complemental strand, 2069590 - 2069458
Alignment:
Q  6 agattcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccatt 105  Q
    |||||||||| || ||||||  | |||||||||| ||   ||||||||  ||||||||||||||| |||| |||||||| ||||||  |||||| || ||    
T  2069590 agattcaatcaattatttgggtgtcaacgttgcaaatttagaagcatgggtattatggtgatttatattttatcatattatttgtatgcattttaccgtt 2069491  T
Q  106 atatattattaacttgggtgttgtgagtttgttc 139  Q
     ||| |||||||||||| || | |||| ||||||    
T  2069490 -tatgttattaacttggatgctttgagattgttc 2069458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 4643957 - 4644090
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaag-catgaatattatggtgatttagatttcatcatatttt-ttgtagtcattttgccatt 105  Q
    |||||||| | ||||||| || ||| |||||||||||||| | ||||||||||  ||| | ||  |||| ||||||| || |||||| |||| |||| ||    
T  4643957 attcaatcaaagatttgggcgtcaaagttgcagatccggaggtcatgaatattccggtcaatttaattttatcatatattattgtaggcattatgccgtt 4644056  T
Q  106 atatattattaacttgggtgttgtgagtttgttc 139  Q
    ||||  ||||||||||| ||||||||| ||||||    
T  4644057 atatgctattaacttggatgttgtgagcttgttc 4644090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 6 - 139
Target Start/End: Complemental strand, 12199703 - 12199571
Alignment:
Q  6 agattcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccatt 105  Q
    |||||||||| | ||||||  || | ||||| ||||| |||||||||||  ||| ||| || ||||| || |||||||| |||||||  ||||| |  ||    
T  12199703 agattcaatcaaagatttgagcgtcgacgttacagattcggaagcatgagaattttggcgacttagaatttatcatattatttgtaggtattttactgtt 12199604  T
Q  106 atatattattaacttgggtgttgtgagtttgttc 139  Q
     ||| |||||| ||||||||||||||||||||||    
T  12199603 gtatgttatta-cttgggtgttgtgagtttgttc 12199571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 20 - 136
Target Start/End: Original strand, 49680649 - 49680766
Alignment:
Q  20 atttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatat-tttttgtagtcattttgccattatatattattaac 118  Q
    |||||| || |||||||||||||||||| |||   |||||  ||| | ||  |||||||||||| ||||||||| |||| || | |||||| ||||||||    
T  49680649 atttgggcgtcaacgttgcagatccggatgcaatgatatttcggtcactttaatttcatcatatatttttgtaggcattatgtcgttatatgttattaac 49680748  T
Q  119 ttgggtgttgtgagtttg 136  Q
    |||  |||||||||||||    
T  49680749 ttgaatgttgtgagtttg 49680766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 62 - 135
Target Start/End: Original strand, 52978899 - 52978972
Alignment:
Q  62 ggtgatttagatttcatcatattttttgtagtcattttgccattatatattattaacttgggtgttgtgagttt 135  Q
    ||||| |||||||| || ||||| |||||||| |||||| |||| ||| |||||||||||| || |||||||||    
T  52978899 ggtgacttagattttattatattatttgtagttattttgtcattgtattttattaacttggatggtgtgagttt 52978972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 139
Target Start/End: Original strand, 9284011 - 9284143
Alignment:
Q  9 ttcaatcgatgatttggacgccaacgttgcagatccggaagca-tgaatattatggtgatttagatttcatcatat-tttttgtagtcattttgccatta 106  Q
    ||||||| | ||||||| || |||||||||||||| ||| ||| ||||||||   || | ||  |||||||||||| ||||||||| |||| |||| |||    
T  9284011 ttcaatcaaagatttgggcgtcaacgttgcagatctggaggcaatgaatatttcagtcactttaatttcatcatatatttttgtaggcattatgccgtta 9284110  T
Q  107 tatattattaacttgggtgttgtgagtttgttc 139  Q
    |||  ||||| | ||| ||||||||||||||||    
T  9284111 tatgctattatcatggatgttgtgagtttgttc 9284143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 35964965 - 35964833
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatat-tttttgtagtcattttgccatta 106  Q
    |||||||| | |||||||||| |||||||||||||||||| |||||| ||||   || | ||  |||| ||||||| |||||||||  ||| ||   |||    
T  35964965 attcaatcaaagatttggacgtcaacgttgcagatccggaggcatgagtatttcagtcactttaattttatcatatatttttgtaggaattatgttgtta 35964866  T
Q  107 tatattattaacttgggtgttgtgagtttgttc 139  Q
    |||  ||||||||||| ||||||||| ||||||    
T  35964865 tatgctattaacttggatgttgtgagattgttc 35964833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 72 - 139
Target Start/End: Original strand, 47417826 - 47417894
Alignment:
Q  72 atttcatcatat-tttttgtagtcattttgccattatatattattaacttgggtgttgtgagtttgttc 139  Q
    |||||||||||| ||||||||| |||| |||| |||||| |||||||||||  || |||||||||||||    
T  47417826 atttcatcatatatttttgtaggcattatgccgttatatgttattaacttgaatgctgtgagtttgttc 47417894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 95 - 138
Target Start/End: Original strand, 9643564 - 9643607
Alignment:
Q  95 attttgccattatatattattaacttgggtgttgtgagtttgtt 138  Q
    |||||||| ||||||  |||||||||||||||||||||||||||    
T  9643564 attttgccgttatatgctattaacttgggtgttgtgagtttgtt 9643607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 64 - 139
Target Start/End: Original strand, 44596817 - 44596892
Alignment:
Q  64 tgatttagatttcatcatattttttgtagtcattttgccattatatattattaacttgggtgttgtgagtttgttc 139  Q
    ||||||| |||| |||||||| |||||||  ||||| || || |||  |||||||||||||| |||||||||||||    
T  44596817 tgatttacattttatcatattatttgtagctattttaccgttgtatgctattaacttgggtgctgtgagtttgttc 44596892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 139
Target Start/End: Complemental strand, 48257628 - 48257509
Alignment:
Q  20 atttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattatatattattaact 119  Q
    ||||||||| ||||||| |||||||| || ||||  ||||  ||||| ||   ||| |||||||| |||||||  |||||||| || |||  ||||||||    
T  48257628 atttggacgtcaacgttacagatccgaaaacatgggtatttcggtgacttgagttttatcatattatttgtaggtattttgccgttgtatgctattaact 48257529  T
Q  120 tgggtgttgtgagtttgttc 139  Q
    ||| | ||||||||||||||    
T  48257528 tggattttgtgagtttgttc 48257509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 100
Target Start/End: Original strand, 55228088 - 55228171
Alignment:
Q  17 atgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttg 100  Q
    ||||||||  || |||||||| | ||||| |||||||| | || | ||||||||||||| |||||||| ||||||| |||||||    
T  55228088 atgatttgcgcgtcaacgttgtatatccgaaagcatgagtgttctcgtgatttagatttaatcatattatttgtagacattttg 55228171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 139
Target Start/End: Original strand, 56199217 - 56199328
Alignment:
Q  30 caacgttgcagatccggaagc-atgaatattatggtgatttagatttcatcatat-tttttgtagtcattttgccattatatattattaacttgggtgtt 127  Q
    |||||||||||||||| |||| |||||||||  | ||| ||  |||| ||||||| ||||||||| |||| |||| ||| ||  ||||||||||| || |    
T  56199217 caacgttgcagatccgaaagccatgaatattccgatgactttaattttatcatatatttttgtagacattatgccgttacatgctattaacttggatgct 56199316  T
Q  128 gtgagtttgttc 139  Q
    ||||||||||||    
T  56199317 gtgagtttgttc 56199328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 134
Target Start/End: Original strand, 8670586 - 8670712
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||| | ||||||||| || |||||||| ||||||| |||||||   |||  ||||| ||||  || |||||||| |||| || |||||||||||| |    
T  8670586 attcaaccaatgatttgggcgtcaacgttgaagatccgaaagcatgtgaatttcggtgacttaggatttatcatattatttgaaggcattttgccatttt 8670685  T
Q  108 atattattaacttgggtgttgtgagtt 134  Q
     |   |||||||||| |||||||||||    
T  8670686 gtgcaattaacttggctgttgtgagtt 8670712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 139
Target Start/End: Original strand, 1532019 - 1532140
Alignment:
Q  20 atttggacgccaacgttgcagatccggaag-catgaatattatggtgatttagatttcatcatat-tttttgtagtcattttgccattatatattattaa 117  Q
    |||||| || |||||||||||| ||||| | |||| ||||| |||  | ||  |||| ||||||| ||||||||| |||| |||| ||||||  ||||||    
T  1532019 atttgggcgtcaacgttgcagaaccggaggtcatggatattctggacactttaattttatcatatatttttgtagacattatgccgttatatgctattaa 1532118  T
Q  118 cttgggtgttgtgagtttgttc 139  Q
    ||||| ||||||||| ||||||    
T  1532119 cttggatgttgtgagcttgttc 1532140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 6972909 - 6973042
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaag-catgaatattatggtgatttagatttcatcatat-tttttgtagtcattttgccatt 105  Q
    |||||||| | | ||||| || |||||||||||||||||| | |||| |||||  ||||| ||  |||| ||||||| |||||||||  ||| |||| ||    
T  6972909 attcaatcaaaggtttgggcgtcaacgttgcagatccggaggccatggatattccggtgactttaattttatcatatatttttgtaggtattatgccgtt 6973008  T
Q  106 atatattattaacttgggtgttgtgagtttgttc 139  Q
    ||||  ||||||||||| || | |||||||||||    
T  6973009 atatgctattaacttggatgctatgagtttgttc 6973042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 9528867 - 9528734
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaag-catgaatattatggtgatttagatttcatcatat-tttttgtagtcattttgccatt 105  Q
    |||||||| | ||||||| || |||||||||||||| ||| | |||| |||||  ||| | ||  |||| ||||||| ||||||||| |||| || | ||    
T  9528867 attcaatcaaagatttggccgtcaacgttgcagatctggaggtcatggatattccggtcactttaattttatcatatatttttgtaggcattatgtcgtt 9528768  T
Q  106 atatattattaacttgggtgttgtgagtttgttc 139  Q
    ||||  ||||||||||  ||||||||||||||||    
T  9528767 atatgctattaacttgaatgttgtgagtttgttc 9528734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 10389744 - 10389611
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagc-atgaatattatggtgatttagatttcatcatat-tttttgtagtcattttgccatt 105  Q
    |||||||| | ||||||  || |||||||||||||||||| || ||| |||||  | | | ||  |||| ||||||| ||||||||| |||| |||| ||    
T  10389744 attcaatcaacgatttgagcgtcaacgttgcagatccggaggccatggatattccgatcactttaattttatcatatatttttgtagacattatgccgtt 10389645  T
Q  106 atatattattaacttgggtgttgtgagtttgttc 139  Q
    ||||  ||||||||||| || |||||||||||||    
T  10389644 atatgctattaacttggatgctgtgagtttgttc 10389611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 139
Target Start/End: Original strand, 12493464 - 12493525
Alignment:
Q  78 tcatattttttgtagtcattttgccattatatattattaacttgggtgttgtgagtttgttc 139  Q
    ||||||| ||||||| |||||||  |||||||  |||||||||| ||| |||||||||||||    
T  12493464 tcatattatttgtagccattttgttattatatgctattaacttgcgtgctgtgagtttgttc 12493525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 139
Target Start/End: Original strand, 25273994 - 25274115
Alignment:
Q  20 atttggacgccaacgttgcagatccggaagc-atgaatattatggtgatttagatttcatcatat-tttttgtagtcattttgccattatatattattaa 117  Q
    |||||| || |||||||||||||||||| || ||| |||||  ||| | ||  |||| ||||||| ||||||||| |||| |||  ||||||  ||||||    
T  25273994 atttgggcgtcaacgttgcagatccggaggccatggatattccggtcactttaattttatcatatatttttgtaggcattatgctgttatatgctattaa 25274093  T
Q  118 cttgggtgttgtgagtttgttc 139  Q
    ||| | ||||||||||||||||    
T  25274094 cttagatgttgtgagtttgttc 25274115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 34024428 - 34024295
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagc-atgaatattatggtgatttagatttcatcatat-tttttgtagtcattttgccatt 105  Q
    |||||||| | ||||||  || |||||||||||||||||| || ||| |||||  ||| ||||  |||| ||||||| ||||||||  |||| ||   ||    
T  34024428 attcaatcaacgatttgagcgtcaacgttgcagatccggaggccatggatattccggtcattttaattttatcatatatttttgtaagcattatgttgtt 34024329  T
Q  106 atatattattaacttgggtgttgtgagtttgttc 139  Q
    ||||  ||||||||||| ||||||||||||||||    
T  34024328 atatgctattaacttggatgttgtgagtttgttc 34024295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 91
Target Start/End: Complemental strand, 38166240 - 38166155
Alignment:
Q  6 agattcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgta 91  Q
    |||||||| | |||||||||||  ||||||||||||||||||  ||||| |||| || ||||||  |||| || ||||| ||||||    
T  38166240 agattcaagcaatgatttggacatcaacgttgcagatccggagacatgagtattctgttgattttaattttataatattatttgta 38166155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 38706700 - 38706567
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagc-atgaatattatggtgatttagatttcatcatat-tttttgtagtcattttgccatt 105  Q
    |||||||||| ||||||| |  |||||||||| ||||||| || ||| |||||  ||| | ||  |||| ||||||| ||||||||| |||| || | ||    
T  38706700 attcaatcgaagatttgggcatcaacgttgcaaatccggaggccatggatatttcggtcactttaattttatcatatatttttgtagacattatgtcgtt 38706601  T
Q  106 atatattattaacttgggtgttgtgagtttgttc 139  Q
    ||||  ||||||||||| || |||||||||||||    
T  38706600 atatgctattaacttggatgatgtgagtttgttc 38706567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 43154004 - 43153871
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagc-atgaatattatggtgatttagatttcatcatat-tttttgtagtcattttgccatt 105  Q
    |||||||| | ||||||  || ||||||| |||||||||| || ||| |||||  ||| | ||  |||| ||||||| ||||||||| |||| |||| ||    
T  43154004 attcaatcaaagatttgagcgtcaacgttacagatccggaggccatggatattccggtcactttaattttatcatatatttttgtaggcattatgccgtt 43153905  T
Q  106 atatattattaacttgggtgttgtgagtttgttc 139  Q
    ||||  | ||||||||| ||||||||||||||||    
T  43153904 atatgctgttaacttggatgttgtgagtttgttc 43153871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 139
Target Start/End: Original strand, 51318096 - 51318217
Alignment:
Q  20 atttggacgccaacgttgcagatccggaag-catgaatattatggtgatttagatttcatcatat-tttttgtagtcattttgccattatatattattaa 117  Q
    |||||| || |||||||||||||||||| | |||| |||||  ||| | ||  |||| ||||||| ||||||||| |||| || | ||||||  ||||||    
T  51318096 atttgggcgtcaacgttgcagatccggaggtcatggatattccggtcactttaattttatcatatatttttgtaggcattatgtcgttatatgctattaa 51318195  T
Q  118 cttgggtgttgtgagtttgttc 139  Q
    ||||| || |||||||||||||    
T  51318196 cttggatgatgtgagtttgttc 51318217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 72 - 139
Target Start/End: Complemental strand, 27593754 - 27593686
Alignment:
Q  72 atttcatcatat-tttttgtagtcattttgccattatatattattaacttgggtgttgtgagtttgttc 139  Q
    |||| ||||||| |||||||||  ||| |||| ||||||  ||||||||||| ||||||||||||||||    
T  27593754 attttatcatatatttttgtaggaattatgccgttatatgctattaacttggatgttgtgagtttgttc 27593686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 120
Target Start/End: Complemental strand, 31359742 - 31359642
Alignment:
Q  20 atttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattatatattattaact 119  Q
    ||||||| | ||||||||||||| | ||||||||  || | |||||||||||||||  ||||||| ||||||   |||||| ||||| ||  ||||||||    
T  31359742 atttggaagtcaacgttgcagattccgaagcatgtgtaatctggtgatttagattttctcatattatttgtaaatattttgtcattacatgctattaact 31359643  T
Q  120 t 120  Q
    |    
T  31359642 t 31359642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 9 - 139
Target Start/End: Complemental strand, 50766501 - 50766369
Alignment:
Q  9 ttcaatcgatgatttggacgccaacgttgcagatccggaagca-tgaatattatggtgatttagatttcatcatat-tttttgtagtcattttgccatta 106  Q
    ||||||| | ||||||  || |||||||||||||||||| ||| || |||||  ||| | ||  |||||||||||| ||||||||| |||| |||  |||    
T  50766501 ttcaatcaaagatttgagcgtcaacgttgcagatccggaggcaatggatattccggtcactttaatttcatcatatatttttgtaggcattatgctgtta 50766402  T
Q  107 tatattattaacttgggtgttgtgagtttgttc 139  Q
    |||  ||||||||||  || |||||||||||||    
T  50766401 tatgctattaacttgaatgctgtgagtttgttc 50766369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 77; Significance: 1e-35; HSPs: 51)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 10332556 - 10332424
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgattt-agatttcatcatattttttgtagtcattttgccatta 106  Q
    |||| ||||||||||| ||| |||||||||||||||||||||||||| |||| || |||||| ||||||||||||||||||||||| ||||||| | |||    
T  10332556 attcgatcgatgatttagacaccaacgttgcagatccggaagcatgagtattctgatgattttagatttcatcatattttttgtaggcattttgtcttta 10332457  T
Q  107 tatattattaacttgggtgttgtgagtttgttc 139  Q
    |||  |||||||||||||| |||||||||||||    
T  10332456 tatgctattaacttgggtgatgtgagtttgttc 10332424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 11 - 139
Target Start/End: Original strand, 14211310 - 14211438
Alignment:
Q  11 caatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattatata 110  Q
    ||||| |||||||||||| ||||||||||||||| ||||||||  |||| |||||||||||||||||||||||| ||||||| |||||| |  || |||     
T  14211310 caatcaatgatttggacgtcaacgttgcagatccagaagcatgggtattctggtgatttagatttcatcatattatttgtaggcatttttctgttgtatg 14211409  T
Q  111 ttattaacttgggtgttgtgagtttgttc 139  Q
     ||||||||||||||||||||||||||||    
T  14211410 ctattaacttgggtgttgtgagtttgttc 14211438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 28540914 - 28540783
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||||| ||||||||| || ||||||||||||||| ||||||||  |||| |||||||||||||||||||||||| ||||||| |||||| || || |    
T  28540914 attcaatcaatgatttgggcgtcaacgttgcagatccagaagcatgggtattttggtgatttagatttcatcatattatttgtagacatttttccgttgt 28540815  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    ||  |||||||||||||| |||||||||||||    
T  28540814 atgctattaacttgggtgctgtgagtttgttc 28540783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 39567350 - 39567481
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||||| |||||||||||| |||| |||||||||| ||| ||||  |||| |||||||||||||||||||||||| ||||||| ||||||| | || |    
T  39567350 attcaatcaatgatttggacgtcaacattgcagatccagaaacatgggtattctggtgatttagatttcatcatattatttgtagacattttgtcgttgt 39567449  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    || |||||| ||||||||||||||||||||||    
T  39567450 atgttattaccttgggtgttgtgagtttgttc 39567481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 2979314 - 2979183
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||||| ||||||||| || ||||||||||||||| |||||| |  |||| |||||||||||||||||||||||| ||||||| |||| |||| || |    
T  2979314 attcaatcaatgatttgggcgtcaacgttgcagatccagaagcacgggtattctggtgatttagatttcatcatattatttgtaggcattgtgccgttgt 2979215  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    ||  ||||||||||| ||||||||||||||||    
T  2979214 atgctattaacttggatgttgtgagtttgttc 2979183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 6 - 139
Target Start/End: Complemental strand, 8088222 - 8088089
Alignment:
Q  6 agattcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccatt 105  Q
    |||||||||| |||||||||||| |||||||||||||||  || || || |||| ||||||||||||||  |||||||| ||||||| ||||||||| ||    
T  8088222 agattcaatcaatgatttggacgtcaacgttgcagatccaaaaacaagagtattctggtgatttagattatatcatattatttgtaggcattttgccttt 8088123  T
Q  106 atatattattaacttgggtgttgtgagtttgttc 139  Q
     |||  |||||||||||||||| |||||||||||    
T  8088122 gtatgctattaacttgggtgttatgagtttgttc 8088089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 38597877 - 38598008
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||| | |||||||||||| ||||||||||||||||||||||||  ||||   |||| |||| ||| |||||||| ||||||| ||||||||| || |    
T  38597877 attcaaccaatgatttggacgtcaacgttgcagatccggaagcatgggtatttcagtgacttaggttttatcatattatttgtaggcattttgccgttgt 38597976  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    ||  ||||||||||||||||||||||||||||    
T  38597977 atgctattaacttgggtgttgtgagtttgttc 38598008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 8 - 138
Target Start/End: Original strand, 13007309 - 13007439
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||| | |||||||||||| ||||||||||||||||||||||||  ||||  ||||| |||  ||| |||||||| ||||||| ||||||||| || |    
T  13007309 attcaaccaatgatttggacgtcaacgttgcagatccggaagcatgggtatttcggtgacttaagttttatcatattatttgtaggcattttgccgttgt 13007408  T
Q  108 atattattaacttgggtgttgtgagtttgtt 138  Q
    ||  |||||||||||||| ||||||||||||    
T  13007409 atgctattaacttgggtgctgtgagtttgtt 13007439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 6 - 138
Target Start/End: Complemental strand, 35921006 - 35920874
Alignment:
Q  6 agattcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccatt 105  Q
    |||||||||| |||||||| ||| |||||||||||||||||||||||  ||||| | ||||||| ||||| |||||||| ||||||| ||||||| ||||    
T  35921006 agattcaatcaatgatttgaacgtcaacgttgcagatccggaagcatcgatattctagtgattttgattttatcatattatttgtaggcattttgtcatt 35920907  T
Q  106 atatattattaacttgggtgttgtgagtttgtt 138  Q
     |||  |||||| || |||||||| | ||||||    
T  35920906 gtatgctattaaatttggtgttgtaaatttgtt 35920874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 9113733 - 9113602
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||| | |||||||||||| |||||||||||||||||||||||  |||||  ||||| |||  ||| |||||||| ||||||| |||||| || || |    
T  9113733 attcaaccaatgatttggacgtcaacgttgcagatccggaagcatagatatttcggtgacttaagttttatcatattatttgtaggcatttttccgttgt 9113634  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    ||  |||||||||||||||| |||||||||||    
T  9113633 atgctattaacttgggtgttctgagtttgttc 9113602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 24229792 - 24229661
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||| | |||||||||||| ||| ||||||||||||| |||||| |||||   |||| |||| ||| |||||||| ||||||| ||||||||| || |    
T  24229792 attcaagcaatgatttggacgtcaatgttgcagatccggtagcatggatatttctgtgacttaggttttatcatattatttgtaggcattttgccgttgt 24229693  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    ||  |||||||||||||| |||||||||||||    
T  24229692 atgctattaacttgggtgctgtgagtttgttc 24229661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 34945473 - 34945604
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||| | |||||||||||| ||||||||||||||||||||||||  ||||  ||||| |||  ||| |||||||| ||| ||| ||||||| | || |    
T  34945473 attcaaccaatgatttggacgtcaacgttgcagatccggaagcatgggtatttcggtgacttaagttttatcatattatttataggcattttgtcgttgt 34945572  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    ||  ||||||||||||||||||||||||||||    
T  34945573 atgctattaacttgggtgttgtgagtttgttc 34945604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 10722841 - 10722972
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||||| ||||||||| || |||||||| ||||||  |||||||  ||||  ||||| |||||||| |||||||| ||||||| |||||| ||  | |    
T  10722841 attcaatcaatgatttgggcgtcaacgttgtagatccaaaagcatgggtatttcggtgacttagattttatcatattatttgtaggcatttttccgctgt 10722940  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    || ||||||||||| |||||||||||||||||    
T  10722941 atgttattaacttgagtgttgtgagtttgttc 10722972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 19103475 - 19103344
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||||| ||||||||| || |||  |||||||||| ||||||||| ||||  ||||||||||||||||||||||| ||| ||| |||||| || || |    
T  19103475 attcaatcaatgatttgggcgtcaatattgcagatccagaagcatgagtattccggtgatttagatttcatcatattatttataggcatttttccgttgt 19103376  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    ||  ||||||||| |||| | |||||||||||    
T  19103375 atgctattaactttggtgctatgagtttgttc 19103344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 26878116 - 26877986
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||||| ||||||||| || |||| |||||||||| ||||||||  |||| |||||| |||||||| |||||||| ||||||| || |||| | || |    
T  26878116 attcaatcaatgatttgggcgtcaacattgcagatccagaagcatgggtattttggtgacttagattttatcatattatttgtaggcactttgtcgttgt 26878017  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    || | |||||||||| ||||||||||||||||    
T  26878016 atct-attaacttggatgttgtgagtttgttc 26877986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 41630582 - 41630713
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||||| ||||||||| || |||||||||| |||| ||||||||  ||||   |||| |||||||| |||||||| ||||||| ||||||| | || |    
T  41630582 attcaatcaatgatttgggcgtcaacgttgcacatccagaagcatgtgtatttccgtgacttagattttatcatattatttgtagacattttgtcgttgt 41630681  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    ||  ||||||||| ||||||||||||||||||    
T  41630682 atgctattaacttaggtgttgtgagtttgttc 41630713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 38007447 - 38007568
Alignment:
Q  17 atgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattatatattatta 116  Q
    |||||||||||| |||||||| |||||||||||||||   |||  ||||| |||| ||| |||||||| ||||||| ||||||||| || |||  |||||    
T  38007447 atgatttggacgtcaacgttgaagatccggaagcatgtgaatttcggtgaattaggttttatcatattatttgtaggcattttgcc-ttttatgctatta 38007545  T
Q  117 acttgggtgttgtgagtttgttc 139  Q
    ||||||||| |||||||||||||    
T  38007546 acttgggtgctgtgagtttgttc 38007568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 15571566 - 15571698
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgcca-tta 106  Q
    |||||||| |||||||||  | ||||||||||||||||||||||||| || |   |||| ||| |||| |||||||| ||| ||| |||||| ||| ||     
T  15571566 attcaatcaatgatttgggtgtcaacgttgcagatccggaagcatgagtagttcagtgacttaaattttatcatattatttatagacatttttccagttg 15571665  T
Q  107 tatattattaacttgggtgttgtgagtttgttc 139  Q
    |||  ||||||||||||||||||||||||||||    
T  15571666 tatgctattaacttgggtgttgtgagtttgttc 15571698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 11976943 - 11976812
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||| | ||||||||||||  ||||||| ||||| |||||||||   |||  ||||| |||| ||| |||||||| ||||||| |||||| || || |    
T  11976943 attcaaccaatgatttggacgtgaacgttgaagatctggaagcatgtgaatttcggtgacttaggttttatcatattatttgtaggcattttcccgtttt 11976844  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    || |||||||||||| ||||||||||||||||    
T  11976843 atgttattaacttggatgttgtgagtttgttc 11976812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 14726469 - 14726338
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||| | |||||||||  | |||||||| |||||||||||||||   ||| |||||| |||| ||| |||||||| ||||||| ||||||| | || |    
T  14726469 attcaaccaatgatttgggtgtcaacgttgaagatccggaagcatgtgaattttggtgacttaggttttatcatattatttgtaggcattttgtcgtttt 14726370  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    ||| ||||||||||| || |||||||||||||    
T  14726369 ataatattaacttggatgctgtgagtttgttc 14726338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 8 - 138
Target Start/End: Original strand, 25980238 - 25980367
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||| | ||||||||| || ||| ||||||||| ||||||||||  |||| | |||| |||  ||| |||||||| ||||||| ||||||||| ||||    
T  25980238 attcaaccaatgatttgggcgtcaaagttgcagattcggaagcatgggtatt-tcgtgacttaagttttatcatattatttgtaggcattttgccgttat 25980336  T
Q  108 atattattaacttgggtgttgtgagtttgtt 138  Q
    ||  |||||||||||||| ||||||||||||    
T  25980337 atgctattaacttgggtgatgtgagtttgtt 25980367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 4954081 - 4954214
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagc-atgaatattatggtgatttagatttcatcatat-tttttgtagtcattttgccatt 105  Q
    |||||||| | |||||||||| ||||||||||||| |||| || |||||||||  ||||| ||  |||| ||||||| ||||||||| |||| |||| ||    
T  4954081 attcaatcaaagatttggacgtcaacgttgcagattcggaggccatgaatattccggtgactttaattttatcatatatttttgtaggcattatgccgtt 4954180  T
Q  106 atatattattaacttgggtgttgtgagtttgttc 139  Q
    ||||  ||||||||| | ||||||||||||||||    
T  4954181 atatgctattaactttgatgttgtgagtttgttc 4954214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 7150325 - 7150192
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccgga-agcatgaatattatggtgatttagatttcatcatat-tttttgtagtcattttgccatt 105  Q
    |||||||| | |||||||||| |||||||||||||||||| | |||| |||||  ||||| ||  |||| ||||||| |||||||||||||| |||| ||    
T  7150325 attcaatcaaagatttggacgtcaacgttgcagatccggagaccatggatatttcggtgactttaattttatcatatatttttgtagtcattatgccgtt 7150226  T
Q  106 atatattattaacttgggtgttgtgagtttgttc 139  Q
    ||||  |||||| |||| || |||||||||||||    
T  7150225 atatgctattaatttggatgctgtgagtttgttc 7150192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 6216978 - 6217110
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattt-tgccatta 106  Q
    |||||||| ||||||||| || ||||||||||||| ||||||||||  ||||  ||||| ||| |||| |||||||| ||||||| |||||  | ||||     
T  6216978 attcaatcaatgatttgggcgtcaacgttgcagattcggaagcatgtgtatttcggtgacttaaattttatcatattatttgtaggcatttaagtcattg 6217077  T
Q  107 tatattattaacttgggtgttgtgagtttgttc 139  Q
    |||  |||||||||| ||| |||||||||||||    
T  6217078 tatgctattaacttgagtgctgtgagtttgttc 6217110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 63 - 139
Target Start/End: Complemental strand, 8096451 - 8096375
Alignment:
Q  63 gtgatttagatttcatcatattttttgtagtcattttgccattatatattattaacttgggtgttgtgagtttgttc 139  Q
    ||||||||| ||| |||||||| ||||||| |||||||||||| |||  |||||||||||||| |||||||||||||    
T  8096451 gtgatttaggttttatcatattatttgtaggcattttgccattttatgctattaacttgggtggtgtgagtttgttc 8096375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 13422013 - 13422144
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||||| ||||||||| || ||| ||||||||| | ||||||||  ||||  ||||| ||| |||| |||||||| | ||||| |||||| || || |    
T  13422013 attcaatcaatgatttgggcgtcaatgttgcagattctgaagcatgtgtatttcggtgacttatattttatcatattatatgtaggcatttttccgtttt 13422112  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    ||  ||||||||||| ||||||||||||||||    
T  13422113 atgctattaacttggatgttgtgagtttgttc 13422144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 31391761 - 31391630
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||| | ||||||||| || ||||||||||||||| |||| |||| ||||  ||||| |||| ||| |||||||| | ||||| |||||| |  || |    
T  31391761 attcaaccaatgatttgggcgtcaacgttgcagatccagaaggatgagtatttcggtgacttaggttttatcatattatatgtaggcatttttctgttgt 31391662  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    ||  ||||||||||| ||||||||||||||||    
T  31391661 atgctattaacttggatgttgtgagtttgttc 31391630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 6012146 - 6012015
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||| | |||||||||||| ||| |||| |||||||||||||||  ||||   |||| |||  ||| |||||||| ||||||| |||| | || || |    
T  6012146 attcaaccaatgatttggacgtcaatgttgtagatccggaagcatgggtatttcagtgacttaagtttgatcatattatttgtaggcattctaccgtttt 6012047  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    ||  |||||||||||||| |||||||||||||    
T  6012046 atgctattaacttgggtgatgtgagtttgttc 6012015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 32 - 139
Target Start/End: Original strand, 26825534 - 26825641
Alignment:
Q  32 acgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattatatattattaacttgggtgttgtga 131  Q
    |||||||||||||  |||||||  ||||  ||||| |||  ||| |||||||| ||||||| ||||||||| || |||  |||||||||||||| |||||    
T  26825534 acgttgcagatccataagcatgtttatttcggtgacttaagttttatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctgtga 26825633  T
Q  132 gtttgttc 139  Q
    ||||||||    
T  26825634 gtttgttc 26825641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 19 - 139
Target Start/End: Original strand, 7247059 - 7247181
Alignment:
Q  19 gatttggacgccaacgttgcagatccggaagc-atgaatattatggtgatttagatttcatcatat-tttttgtagtcattttgccattatatattatta 116  Q
    |||||| ||| |||||||||||||||||| || ||| |||||  ||||| ||  |||| ||||||| ||||||||| |||| |||| ||||||  |||||    
T  7247059 gatttgaacgtcaacgttgcagatccggaggccatggatattccggtgactttaattttatcatatatttttgtaggcattatgccgttatatgctatta 7247158  T
Q  117 acttgggtgttgtgagtttgttc 139  Q
    |||||| || |||||||||||||    
T  7247159 acttggatgctgtgagtttgttc 7247181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 19 - 139
Target Start/End: Original strand, 43148827 - 43148949
Alignment:
Q  19 gatttggacgccaacgttgcagatccggaagc-atgaatattatggtgatttagatttcatcatat-tttttgtagtcattttgccattatatattatta 116  Q
    |||||||||  |||||||||||||| ||| || ||| |||||  ||||| ||  |||| ||||||| ||||||||| |||| |||| ||||||  |||||    
T  43148827 gatttggacctcaacgttgcagatctggaggccatggatattccggtgactttaattttatcatatatttttgtaggcattatgccgttatatgctatta 43148926  T
Q  117 acttgggtgttgtgagtttgttc 139  Q
    |||||| ||||||||||||||||    
T  43148927 acttggatgttgtgagtttgttc 43148949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 11 - 52
Target Start/End: Complemental strand, 8984960 - 8984919
Alignment:
Q  11 caatcgatgatttggacgccaacgttgcagatccggaagcat 52  Q
    |||||||||||||||||| |||||||||||||||||||||||    
T  8984960 caatcgatgatttggacgacaacgttgcagatccggaagcat 8984919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 19280935 - 19280803
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagc-atgaatattatggtgatttagatttcatcatat-tttttgtagtcattttgccatt 105  Q
    |||||||| | |||||||||| |||||||||||||||||| || ||| |||||  ||||| ||  || | ||||||| ||||||||| |||| || | ||    
T  19280935 attcaatcaaagatttggacgtcaacgttgcagatccggaggctatggatattccggtgactttaatattatcatatatttttgtaggcattatg-cgtt 19280837  T
Q  106 atatattattaacttgggtgttgtgagtttgttc 139  Q
    ||||  ||||||||||| ||||||||||||||||    
T  19280836 atatgctattaacttggatgttgtgagtttgttc 19280803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 83 - 139
Target Start/End: Complemental strand, 8984918 - 8984862
Alignment:
Q  83 ttttttgtagtcattttgccattatatattattaacttgggtgttgtgagtttgttc 139  Q
    |||||||||| ||||||| | ||||||| ||||||||||| ||||||||||||||||    
T  8984918 ttttttgtaggcattttgtcgttatatactattaacttggatgttgtgagtttgttc 8984862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 121
Target Start/End: Original strand, 26578342 - 26578456
Alignment:
Q  9 ttcaatcgatgatttggacgccaacgttgcagatccggaagc-atgaatattatggtgatttagatttcatcatat-tttttgtagtcattttgccatta 106  Q
    ||||||| | ||||||| || ||| ||||||||||||||||| |||||||||  ||| | ||  |||||||||||| ||||||||| |||| |||| |||    
T  26578342 ttcaatcaaagatttgggcgtcaatgttgcagatccggaagcaatgaatatttcggtcactttaatttcatcatatatttttgtaggcattatgccgtta 26578441  T
Q  107 tatattattaacttg 121  Q
    |||  ||||||||||    
T  26578442 tatgctattaacttg 26578456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 30 - 133
Target Start/End: Original strand, 781499 - 781604
Alignment:
Q  30 caacgttgcagatccggaagc-atgaatattatggtgatttagatttcatcatat-tttttgtagtcattttgccattatatattattaacttgggtgtt 127  Q
    ||||||||||||||||||||| ||| |||||  ||| | ||  |||| ||||||| ||||||||| |||| |||| ||||||  ||||||||||| ||||    
T  781499 caacgttgcagatccggaagccatggatattccggtcactttaattttatcatatatttttgtagacattatgccgttatatgctattaacttggatgtt 781598  T
Q  128 gtgagt 133  Q
    ||||||    
T  781599 gtgagt 781604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 139
Target Start/End: Original strand, 7241883 - 7242006
Alignment:
Q  19 gatttggacgccaacgttgcagatccggaagc-atgaatattatggt-gatttagatttcatcatat-tttttgtagtcattttgccattatatattatt 115  Q
    |||||| ||| |||||||||||||||||| || ||| |||||  ||| || ||  |||| ||||||| ||||||||| |||| |||| ||||||  ||||    
T  7241883 gatttgaacgtcaacgttgcagatccggaggccatggatattccggttgactttaattttatcatatatttttgtaggcattatgccgttatatgctatt 7241982  T
Q  116 aacttgggtgttgtgagtttgttc 139  Q
    ||||||| || |||||||||||||    
T  7241983 aacttggatgctgtgagtttgttc 7242006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 135
Target Start/End: Original strand, 7930257 - 7930384
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||| | ||||||||  || ||| ||||||||||||||||||||| ||||  |||   |||| ||| |||||||| ||||||| ||||||| | || |    
T  7930257 attcaaccaatgatttgagcgtcaatgttgcagatccggaagcatgagtatttaggtttcttaggttttatcatattatttgtaggcattttgtcgttgt 7930356  T
Q  108 atattattaacttgggtgttgtgagttt 135  Q
    |||  |||||| ||| || |||||||||    
T  7930357 ataccattaacctggatgctgtgagttt 7930384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 72 - 139
Target Start/End: Original strand, 28235739 - 28235809
Alignment:
Q  72 atttcatcatat-tttttgtagtcattttgccattatatat--tattaacttgggtgttgtgagtttgttc 139  Q
    |||| ||||||| ||||||||| |||| |||| ||||||||  ||||||||||| ||||||||||||||||    
T  28235739 attttatcatatatttttgtaggcattatgccgttatatatgctattaacttggatgttgtgagtttgttc 28235809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 102
Target Start/End: Original strand, 1409578 - 1409672
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgcc 102  Q
    |||||||| |||||||   || ||| |||||||||||| || |||||||||| | |||| |||||||| |||||||| |||| ||  ||||||||    
T  1409578 attcaatcaatgatttatgcgtcaatgttgcagatccgaaaacatgaatattttagtgacttagatttaatcatattatttgaagatattttgcc 1409672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 138
Target Start/End: Original strand, 7036303 - 7036428
Alignment:
Q  12 aatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattatatat 111  Q
    |||| ||||||||| || |||||||||||||||| |||||||  ||||  |  || |||||||| |||||||| |||||||  |||||||  || |||      
T  7036303 aatctatgatttgggcgtcaacgttgcagatccgaaagcatgggtatttcgaggacttagattttatcatattgtttgtaggaattttgctgttgtatgc 7036402  T
Q  112 tattaacttgggtgttgtgagtttgtt 138  Q
    |||||| |||| |||| ||||||||||    
T  7036403 tattaaattggttgtt-tgagtttgtt 7036428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 84 - 138
Target Start/End: Original strand, 34881884 - 34881938
Alignment:
Q  84 tttttgtagtcattttgccattatatattattaacttgggtgttgtgagtttgtt 138  Q
    ||||||||| |||| |||| ||||||  ||||||||||| |||||||||||||||    
T  34881884 tttttgtaggcattatgccgttatatgctattaacttggatgttgtgagtttgtt 34881938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 139
Target Start/End: Complemental strand, 14082382 - 14082273
Alignment:
Q  30 caacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattatatattattaacttgggtgttgt 129  Q
    ||||||||||||||||||||||||  ||||    ||| |||| ||| |||||||| ||||||| ||||||| | || |||  ||||||||| | || ||     
T  14082382 caacgttgcagatccggaagcatgggtatttcaatgacttaggttttatcatattatttgtaggcattttgtcgttgtatgctattaacttcgatgatgg 14082283  T
Q  130 gagtttgttc 139  Q
    ||||||||||    
T  14082282 gagtttgttc 14082273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 16981379 - 16981514
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaag-catgaatattatggtgatttagatttcatcatat---tttttgtagtcattttgcca 103  Q
    |||||||| | ||||||| || || ||||||||||||||| | |||| |||||  ||||| ||  |||| |||||||   ||||||||| |||| |  |     
T  16981379 attcaatcaaagatttgggcgtcatcgttgcagatccggaggtcatggatattccggtgactttaattttatcatatatatttttgtaggcattatatcg 16981478  T
Q  104 ttatatattattaacttgggtgttgtgagtttgttc 139  Q
    ||||||  ||||||||||| ||||||||||||||||    
T  16981479 ttatatgctattaacttggatgttgtgagtttgttc 16981514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 139
Target Start/End: Original strand, 19121014 - 19121123
Alignment:
Q  30 caacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattatatattattaacttgggtgttgt 129  Q
    ||||| ||||||||  ||| ||||||||||  ||||| |||| ||| |||||||| ||||||| | ||||||  || |||  |||||| |||| || |||    
T  19121014 caacgctgcagatctagaaacatgaatatttcggtgacttaggttttatcatattatttgtagacgttttgctcttgtatgatattaatttggatgatgt 19121113  T
Q  130 gagtttgttc 139  Q
    ||||||||||    
T  19121114 gagtttgttc 19121123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 19259802 - 19259669
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagc-atgaatattatggtgatttagatttcatcatat-tttttgtagtcattttgccatt 105  Q
    |||||||| | ||||||| || |||||||||||||||  | || ||| |||||  ||| | ||  |||| ||||||| ||||||||| |||| |||| ||    
T  19259802 attcaatcaaagatttgggcgtcaacgttgcagatccaaaggccatggatattccggtcactttaattttatcatatatttttgtaggcattatgccgtt 19259703  T
Q  106 atatattattaacttgggtgttgtgagtttgttc 139  Q
    ||||  ||||||||||| || |||||||||||||    
T  19259702 atatgctattaacttggatgctgtgagtttgttc 19259669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 21060273 - 21060140
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaag-catgaatattatggtgatttagatttcatcatat-tttttgtagtcattttgccatt 105  Q
    |||||||| | ||||||| || |||||||||||||||||| | |||| |||||  ||| | ||  |||| ||||||| ||||||||| |||| || | ||    
T  21060273 attcaatcaaagatttgggcgtcaacgttgcagatccggaggccatggatattccggtcactttaattttatcatatatttttgtaggcattatgtcgtt 21060174  T
Q  106 atatattattaacttgggtgttgtgagtttgttc 139  Q
    ||||  ||| ||||||| |||||||||| |||||    
T  21060173 atattctatcaacttggatgttgtgagtatgttc 21060140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 141
Target Start/End: Complemental strand, 43008227 - 43008170
Alignment:
Q  84 tttttgtagtcattttgccattatatattattaacttgggtgttgtgagtttgttctc 141  Q
    ||||||||| |||| |||| ||||||  ||||||||||| |||| |||||||||||||    
T  43008227 tttttgtaggcattatgccgttatatgctattaacttggatgttatgagtttgttctc 43008170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 72 - 139
Target Start/End: Original strand, 15571061 - 15571129
Alignment:
Q  72 atttcatcatat-tttttgtagtcattttgccattatatattattaacttgggtgttgtgagtttgttc 139  Q
    |||| ||||||| ||||||||| |||| || | ||||||  ||||||||||| ||||||||||||||||    
T  15571061 attttatcatatatttttgtaggcattatgtcgttatatgctattaacttggatgttgtgagtttgttc 15571129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 72 - 139
Target Start/End: Complemental strand, 20257621 - 20257553
Alignment:
Q  72 atttcatcatat-tttttgtagtcattttgccattatatattattaacttgggtgttgtgagtttgttc 139  Q
    |||| ||||||| ||||||||| |||| || | |||||| |||||||||||| || |||||||||||||    
T  20257621 attttatcatatatttttgtaggcattatgtcgttatatgttattaacttggatgatgtgagtttgttc 20257553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 138
Target Start/End: Original strand, 42579977 - 42580109
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaag-catgaatattatggtgatttagatttcatcatat-tttttgtagtcattttgccatt 105  Q
    |||||||| | ||||||| || |||||||||||||||||| | ||||||||||  ||| | ||  |||| ||||||| |||||| ||  ||| |||| ||    
T  42579977 attcaatcaaagatttgggcgtcaacgttgcagatccggaggccatgaatattccggtcactttaattttatcatatatttttgcagatattatgccgtt 42580076  T
Q  106 atatattattaacttgggtgttgtgagtttgtt 138  Q
    ||||  ||||||||||  || ||||||||||||    
T  42580077 atatgctattaacttgaatgctgtgagtttgtt 42580109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 72; Significance: 1e-32; HSPs: 67)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 42046304 - 42046435
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||||| ||||||||| || ||| ||||||||||| ||||||||  |||| |||||||||||||||||||||||| ||||||| ||||||| |||  |    
T  42046304 attcaatcaatgatttgggcgtcaatgttgcagatccagaagcatgggtattctggtgatttagatttcatcatattatttgtaggcattttgacatcgt 42046403  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    ||  ||||||||||||||||||||||||||||    
T  42046404 atgctattaacttgggtgttgtgagtttgttc 42046435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 6 - 139
Target Start/End: Original strand, 15344389 - 15344522
Alignment:
Q  6 agattcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccatt 105  Q
    |||||||||| |||||||||||| ||||||||||||||| |||||| || |||| ||||||||||||||  |||||||| ||||||| ||||||| | ||    
T  15344389 agattcaatcaatgatttggacgtcaacgttgcagatccagaagcaagagtattctggtgatttagattatatcatattatttgtaggcattttgtcgtt 15344488  T
Q  106 atatattattaacttgggtgttgtgagtttgttc 139  Q
     |||  |||||||||||||| |||||||||||||    
T  15344489 gtatgctattaacttgggtgctgtgagtttgttc 15344522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 6 - 139
Target Start/End: Original strand, 15433454 - 15433587
Alignment:
Q  6 agattcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccatt 105  Q
    |||||||||| |||||||||||| ||||||||||||||| |||||| || |||| ||||||||||||||  |||||||| ||||||| ||||||| | ||    
T  15433454 agattcaatcaatgatttggacgtcaacgttgcagatccagaagcaagagtattctggtgatttagattatatcatattatttgtaggcattttgtcgtt 15433553  T
Q  106 atatattattaacttgggtgttgtgagtttgttc 139  Q
     |||  |||||||||||||| |||||||||||||    
T  15433554 gtatgctattaacttgggtgctgtgagtttgttc 15433587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 6 - 139
Target Start/End: Original strand, 15524758 - 15524891
Alignment:
Q  6 agattcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccatt 105  Q
    |||||||||| |||||||||||| ||||||||||||||| |||||| || |||| ||||||||||||||  |||||||| ||||||| ||||||| | ||    
T  15524758 agattcaatcaatgatttggacgtcaacgttgcagatccagaagcaagagtattctggtgatttagattatatcatattatttgtaggcattttgtcgtt 15524857  T
Q  106 atatattattaacttgggtgttgtgagtttgttc 139  Q
     |||  |||||||||||||| |||||||||||||    
T  15524858 gtatgctattaacttgggtgctgtgagtttgttc 15524891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 8 - 135
Target Start/End: Complemental strand, 7198201 - 7198074
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||||| |||||||||| | |||||||||||||||||||||||||||||| ||||||||||||||| |||||||| |||| ||  |||||| | || |    
T  7198201 attcaatcaatgatttggatgtcaacgttgcagatccggaagcatgaatattttggtgatttagattttatcatattatttgcaggaattttgtcgttgt 7198102  T
Q  108 atattattaacttgggtgttgtgagttt 135  Q
    ||  |||||| |||||||||||||||||    
T  7198101 atgctattaatttgggtgttgtgagttt 7198074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 14585760 - 14585891
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    ||||||||  ||||||||||| ||||||||||||||| ||||||||  |||  |||||||||||||||||||||||| ||||||| | ||||||| || |    
T  14585760 attcaatcattgatttggacgtcaacgttgcagatccagaagcatgggtatcctggtgatttagatttcatcatattatttgtaggcgttttgccgttgt 14585859  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    ||  |||||||||||||| |||||||||||||    
T  14585860 atgctattaacttgggtgctgtgagtttgttc 14585891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 8 - 138
Target Start/End: Complemental strand, 43834002 - 43833872
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||||| ||||||| |||| ||||||||||||||  ||||||||| |||| ||||||||||| ||| |||||||| ||||||| ||||||||| || |    
T  43834002 attcaatcaatgatttagacgtcaacgttgcagatctagaagcatgagtattctggtgatttagtttttatcatattatttgtaggcattttgccgttgt 43833903  T
Q  108 atattattaacttgggtgttgtgagtttgtt 138  Q
    ||  |||||||||||||| ||||||||||||    
T  43833902 atgctattaacttgggtgctgtgagtttgtt 43833872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 30 - 139
Target Start/End: Original strand, 41896622 - 41896731
Alignment:
Q  30 caacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattatatattattaacttgggtgttgt 129  Q
    ||||||||||||||  ||||||||| |||| |||||||||||||||||||||||| ||||||| ||||||| | || |||  ||||||||||||||||||    
T  41896622 caacgttgcagatctagaagcatgagtattctggtgatttagatttcatcatattatttgtaggcattttgtcgttgtatgctattaacttgggtgttgt 41896721  T
Q  130 gagtttgttc 139  Q
    ||||||||||    
T  41896722 gagtttgttc 41896731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 18890705 - 18890574
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||||| ||||||||| || ||||||||||||||| ||| |||   |||||||||||||||||||| |||||||| ||||||| ||||||| | || |    
T  18890705 attcaatcaatgatttgggcgtcaacgttgcagatccagaaacataggtattatggtgatttagattttatcatattatttgtaggcattttgtcgttgt 18890606  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    ||  |||||||||||||| |||||||||||||    
T  18890605 atgctattaacttgggtgctgtgagtttgttc 18890574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 37971366 - 37971497
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||| | |||||||||||| ||||||||||||||||||| ||||| ||||  ||||| |||| ||| |||| ||| ||||||| ||||||||| || |    
T  37971366 attcaagcaatgatttggacgtcaacgttgcagatccggaaacatgagtatttcggtgacttaggttttatcacattatttgtaggcattttgccgttgt 37971465  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    ||  ||||||||||||||||||||||||||||    
T  37971466 atgctattaacttgggtgttgtgagtttgttc 37971497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 8 - 102
Target Start/End: Original strand, 39657537 - 39657631
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgcc 102  Q
    |||||||| |||||||||||| ||||||||||||||| ||||||||  |||| |||||||||||||||||||||||| ||||||| |||||||||    
T  39657537 attcaatcaatgatttggacgtcaacgttgcagatccagaagcatgggtattctggtgatttagatttcatcatattatttgtaggcattttgcc 39657631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 1236703 - 1236572
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||||| ||||| |||||| ||||||||||||||| |||||| || |||| ||||||||||||||  |||||| | ||| ||| ||||||||| || |    
T  1236703 attcaatcaatgatctggacgtcaacgttgcagatccagaagcaagagtattctggtgatttagattatatcatactatttttaggcattttgccgttgt 1236604  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    ||  |||||||||||||| |||||||||||||    
T  1236603 atgctattaacttgggtgctgtgagtttgttc 1236572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 16928763 - 16928632
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||| | |||||||||||  |||||||||||||||| |||| ||  ||||  ||||| |||| ||| |||||||| ||||||| |||||||||||| |    
T  16928763 attcaaccaatgatttggacatcaacgttgcagatccgaaagcgtgggtatttcggtgacttaggttttatcatattatttgtaggcattttgccattgt 16928664  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    ||  ||||||||||||||||||||||||||||    
T  16928663 atgctattaacttgggtgttgtgagtttgttc 16928632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 31013614 - 31013483
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||||| |||||||||||| ||||||||||||| ||||||||||  ||||   |||| |||  ||| |||||||| ||||||| ||||||||| || |    
T  31013614 attcaatcaatgatttggacgtcaacgttgcagattcggaagcatgtgtatttcagtgacttaagttttatcatattatttgtaggcattttgccgttgt 31013515  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    ||  ||||||||||||||||||||||||||||    
T  31013514 atgctattaacttgggtgttgtgagtttgttc 31013483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 7677280 - 7677158
Alignment:
Q  17 atgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattatatattatta 116  Q
    ||||||||  || ||||||||||||||||||||||||||||||  ||||| |||| ||| |||||||| ||||||  ||||||||| || ||| ||||||    
T  7677280 atgatttgagcgtcaacgttgcagatccggaagcatgaatatttcggtgacttaggttttatcatattatttgtaagcattttgccgttgtatgttatta 7677181  T
Q  117 acttgggtgttgtgagtttgttc 139  Q
    ||||||||| ||||| |||||||    
T  7677180 acttgggtgctgtgactttgttc 7677158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 3 - 101
Target Start/End: Complemental strand, 14916198 - 14916101
Alignment:
Q  3 cagagattcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgc 101  Q
    ||||||||||||| |||||||||||| | | |||||||||||||||||||||||||| || |||||||||||| |||||||| ||||||| ||||||||    
T  14916198 cagagattcaatcaatgatttggacgtccatgttgcagatccggaagcatgaatatt-tgttgatttagattttatcatattgtttgtaggcattttgc 14916101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 20 - 139
Target Start/End: Complemental strand, 7883235 - 7883116
Alignment:
Q  20 atttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattatatattattaact 119  Q
    ||||||||| || |||||||||||||||||||||  ||||  ||||| |||| ||| |||||||| ||||||| ||||||||| || |||  ||||||||    
T  7883235 atttggacgtcagcgttgcagatccggaagcatgggtatttcggtgacttaggttttatcatattatttgtaggcattttgccgttgtatcctattaact 7883136  T
Q  120 tgggtgttgtgagtttgttc 139  Q
    |||||| |||||||||||||    
T  7883135 tgggtgctgtgagtttgttc 7883116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 23230726 - 23230857
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||| | |||| |||| || ||||||||||||||||||||||||  ||||  ||||| |||| ||| |||||||| ||||||| ||||||| | || |    
T  23230726 attcaaccaatgacttgggcgtcaacgttgcagatccggaagcatgggtatttcggtgacttaggttttatcatattatttgtaggcattttgtcgttgt 23230825  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    ||  ||||||||||||||||||||||||||||    
T  23230826 atgctattaacttgggtgttgtgagtttgttc 23230857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 27110471 - 27110340
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||||| ||||||||  || |||||||||||||| |||||||||  |||| | |||| |||||||| |||||||| ||||||| ||||||  | || |    
T  27110471 attcaatcaatgatttgagcgtcaacgttgcagatctggaagcatgtgtattttagtgacttagattttatcatattatttgtagacattttatcgttgt 27110372  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    ||  ||||||||||||||||||||||||||||    
T  27110371 atgctattaacttgggtgttgtgagtttgttc 27110340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 8 - 135
Target Start/End: Original strand, 3240463 - 3240590
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatca--tattttttgtagtcattttgccatt 105  Q
    ||||||||||||||||||||||||| ||||||||||| |||| |||  |||| |||||||||||| || ||||  | |||||||||| ||||||||| ||    
T  3240463 attcaatcgatgatttggacgccaatgttgcagatccagaagtatgggtattctggtgatttagaatt-atcattttttttttgtag-cattttgccgtt 3240560  T
Q  106 atatattattaacttgggtgttgtgagttt 135  Q
    ||||  ||||||||||| ||||||||||||    
T  3240561 atatgctattaacttggatgttgtgagttt 3240590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 8 - 121
Target Start/End: Complemental strand, 20553247 - 20553134
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||| | |||||||||||| ||||||||||||||||||||||||| ||||  ||||| |||| ||| |||||||| ||||||| ||||||||| || |    
T  20553247 attcaagcaatgatttggacgtcaacgttgcagatccggaagcatgagtatttcggtgacttaggttttatcatattatttgtaggcattttgccgttgt 20553148  T
Q  108 atattattaacttg 121  Q
    ||  ||||||||||    
T  20553147 atgctattaacttg 20553134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 6 - 139
Target Start/End: Complemental strand, 471174 - 471039
Alignment:
Q  6 agattcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcatttt--gcca 103  Q
    |||||||||| ||||||||  || ||||||||||||||||||||||||  |||| || |||||||||||| |||||||| ||||||| ||||||  | |     
T  471174 agattcaatcaatgatttgtgcgtcaacgttgcagatccggaagcatgggtattctgatgatttagattttatcatattatttgtaggcattttttgtcg 471075  T
Q  104 ttatatattattaacttgggtgttgtgagtttgttc 139  Q
     | ||| ||||||||||||||| ||||| |||||||    
T  471074 atgtatgttattaacttgggtgatgtgattttgttc 471039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 24099256 - 24099131
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    ||||| || |||||||| ||| |||||||||||||||||||| | ||||||| ||||||||||||||| |||||||| ||||||| ||       |||||    
T  24099256 attcattcaatgatttgtacgtcaacgttgcagatccggaagaaagaatattttggtgatttagattttatcatattatttgtaggca------aattat 24099163  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    ||  ||||||||||| ||||||||||||||||    
T  24099162 atgctattaacttggatgttgtgagtttgttc 24099131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 8 - 98
Target Start/End: Complemental strand, 8443517 - 8443427
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattt 98  Q
    |||||||| |||||||||||  ||||||||||||||||||||||    |||||||||||||||||||| |||||||| ||||||| |||||    
T  8443517 attcaatcaatgatttggacatcaacgttgcagatccggaagcactggtattatggtgatttagatttgatcatattatttgtagacattt 8443427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 8 - 125
Target Start/End: Complemental strand, 1239403 - 1239286
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||||| ||||| |||||| ||||||||||||||| |||||| || |||| ||||||||||||||  |||||| | ||||||| ||||||| | || |    
T  1239403 attcaatcaatgatctggacgtcaacgttgcagatccagaagcaagagtattctggtgatttagattatatcatactatttgtaggcattttgacgttgt 1239304  T
Q  108 atattattaacttgggtg 125  Q
    ||  ||||||||||||||    
T  1239303 atgctattaacttgggtg 1239286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 8 - 121
Target Start/End: Complemental strand, 20559750 - 20559637
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||| | |||||||||||| ||||||||||||||||||||||||| ||||  ||||| |||| ||| |||||||| ||||| | ||||||||| || |    
T  20559750 attcaagcaatgatttggacgtcaacgttgcagatccggaagcatgagtatttcggtgacttaggttttatcatattatttgtgggcattttgccgttgt 20559651  T
Q  108 atattattaacttg 121  Q
    ||  ||||||||||    
T  20559650 atgctattaacttg 20559637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 8 - 121
Target Start/End: Complemental strand, 20571312 - 20571199
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||| | |||||||||||| ||||||||||||||||||||||||| ||||  ||||| |||| ||| |||||||| ||||| | ||||||||| || |    
T  20571312 attcaagcaatgatttggacgtcaacgttgcagatccggaagcatgagtatttcggtgacttaggttttatcatattatttgtgggcattttgccgttgt 20571213  T
Q  108 atattattaacttg 121  Q
    ||  ||||||||||    
T  20571212 atgctattaacttg 20571199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 6 - 139
Target Start/End: Complemental strand, 29617282 - 29617149
Alignment:
Q  6 agattcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccatt 105  Q
    |||||||||| |||||||||||| |||||||||||||||  || |||   |||| ||||||||||||||| |||||||| ||||||| |||||||   ||    
T  29617282 agattcaatcaatgatttggacgtcaacgttgcagatccataaacattgttattctggtgatttagattttatcatattatttgtaggcattttgttgtt 29617183  T
Q  106 atatattattaacttgggtgttgtgagtttgttc 139  Q
     |||  |||||||||   ||||||||||||||||    
T  29617182 gtatgctattaacttaaatgttgtgagtttgttc 29617149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 8867888 - 8868022
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||||| ||||||||| |  ||| |||| ||||| |||||| || ||||| ||||||||||||||| |||||||| ||||||| ||||||| | || |    
T  8867888 attcaatcaatgatttgggcatcaaagttgaagatctggaagcttggatattctggtgatttagattttatcatattatttgtaggcattttgtcgttgt 8867987  T
Q  108 atattat---taacttgggtgttgtgagtttgttc 139  Q
    || ||||   ||||||||||| |||||||||||||    
T  8867988 atgttatttataacttgggtggtgtgagtttgttc 8868022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 8 - 136
Target Start/End: Original strand, 10377772 - 10377900
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||| | |||||||||||  ||||||||||||||||||||||||  ||||  || || |||  ||| |||||||| ||||||| ||||||||| || |    
T  10377772 attcaaccaatgatttggacatcaacgttgcagatccggaagcatgggtatttcggcgacttaagttttatcatattatttgtaggcattttgccgttgt 10377871  T
Q  108 atattattaacttgggtgttgtgagtttg 136  Q
    ||  |||||||||||||| ||||||||||    
T  10377872 atgctattaacttgggtgctgtgagtttg 10377900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 45445817 - 45445686
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||| | ||||||||| || |||||||| | |||||||||||||   ||| |||||| |||||||| |||||||| ||||||| |||||||   || |    
T  45445817 attcaaccaatgatttgggcgtcaacgttgaaaatccggaagcatgtgaattttggtgacttagattttatcatattatttgtaggcattttgttgtttt 45445718  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    ||  ||||||||||| ||||||||||||||||    
T  45445717 atgctattaacttggatgttgtgagtttgttc 45445686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 12 - 138
Target Start/End: Original strand, 3673528 - 3673654
Alignment:
Q  12 aatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattatatat 111  Q
    |||| ||| ||||| || ||||||||||||||||||||||||| ||||   |||| |||  ||| |||||||| ||||||| ||||||||| || |||      
T  3673528 aatcaatgctttgggcgtcaacgttgcagatccggaagcatgagtatttcagtgacttaagtttaatcatattatttgtaggcattttgccgttgtatcc 3673627  T
Q  112 tattaacttgggtgttgtgagtttgtt 138  Q
    ||||||||||| || ||||||||||||    
T  3673628 tattaacttggatgctgtgagtttgtt 3673654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 28897801 - 28897923
Alignment:
Q  17 atgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattatatattatta 116  Q
    ||||||||| ||  |||||||||||| |||||| ||  | |||  | ||| |||||||| |||||||| ||||||||||||||| |||| |||  |||||    
T  28897801 atgatttgggcgtaaacgttgcagatacggaagtattgaaatttcgatgacttagattttatcatattatttgtagtcattttgtcattctatgctatta 28897900  T
Q  117 acttgggtgttgtgagtttgttc 139  Q
    || ||||||||||||||||||||    
T  28897901 acgtgggtgttgtgagtttgttc 28897923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 6 - 139
Target Start/End: Original strand, 5046834 - 5046967
Alignment:
Q  6 agattcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccatt 105  Q
    |||||||||| || ||||||||| | ||||||||||| |  || ||||||||||   |||| ||||| || |||||||| ||||||| ||||||  | ||    
T  5046834 agattcaatcaataatttggacgtcgacgttgcagattcataaacatgaatatttcagtgacttagaatttatcatattatttgtaggcattttatcgtt 5046933  T
Q  106 atatattattaacttgggtgttgtgagtttgttc 139  Q
     ||| ||||||||||||||| |||||||||||||    
T  5046934 gtatgttattaacttgggtgatgtgagtttgttc 5046967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 16247229 - 16247098
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||||| ||||||||| |  ||| ||||||||||||||||||||  ||||  | ||| |||||||| |||||||| |||| || ||||||||| || |    
T  16247229 attcaatcaatgatttgggcatcaatgttgcagatccggaagcatgggtatttcgctgacttagatttgatcatattatttgaaggcattttgccgttgt 16247130  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    ||  |||||||| |||||| || |||||||||    
T  16247129 atgctattaactcgggtgtagtaagtttgttc 16247098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 9 - 138
Target Start/End: Complemental strand, 24186666 - 24186537
Alignment:
Q  9 ttcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattata 108  Q
    ||||||| || |||||| || |||||||||||||||| |||||||  ||||   |||| ||| |||| |||||||| ||| ||| ||||||||| |  ||    
T  24186666 ttcaatcaataatttgggcgtcaacgttgcagatccgaaagcatgggtatttcagtgacttaaattttatcatattatttataggcattttgccgtcgta 24186567  T
Q  109 tattattaacttgggtgttgtgagtttgtt 138  Q
    || ||||||||| |||||| ||||||||||    
T  24186566 tactattaacttaggtgttatgagtttgtt 24186537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 43135569 - 43135436
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagc-atgaatattatggtgatttagatttcatcatatttttt-gtagtcattttgccatt 105  Q
    |||||||| | ||||||| || ||||||| ||||||||||||| ||| ||||| |||| | ||  |||| ||||||| |||| |||| |||| |||| ||    
T  43135569 attcaatcaaagatttgggcgtcaacgtttcagatccggaagccatgtatattctggtcactttaattttatcatatattttcgtaggcattatgccgtt 43135470  T
Q  106 atatattattaacttgggtgttgtgagtttgttc 139  Q
    |||| |||||||||||| |||||||||| |||||    
T  43135469 atatgttattaacttggatgttgtgagtatgttc 43135436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 9 - 139
Target Start/End: Original strand, 4809059 - 4809191
Alignment:
Q  9 ttcaatcgatgatttggacgccaacgttgcagatccggaagca-tgaatattatggtgatttagatttcatcatat-tttttgtagtcattttgccatta 106  Q
    ||||||| | ||||||| || |||||||||||||||||| ||| || |||||  ||| | ||  |||||||||||| ||||||||| |||| |||| |||    
T  4809059 ttcaatcaaggatttgggcgtcaacgttgcagatccggaggcaatggatattccggtcactttaatttcatcatatatttttgtaggcattatgccgtta 4809158  T
Q  107 tatattattaacttgggtgttgtgagtttgttc 139  Q
    |||  ||||||||| | ||||||||||||||||    
T  4809159 tatgctattaacttagatgttgtgagtttgttc 4809191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 9 - 139
Target Start/End: Original strand, 11464266 - 11464398
Alignment:
Q  9 ttcaatcgatgatttggacgccaacgttgcagatccggaagca-tgaatattatggtgatttagatttcatcatat-tttttgtagtcattttgccatta 106  Q
    ||||||| | ||||||| || |||||||||||||||||| ||| || |||||  ||| | ||  |||||||||||| ||||||||| |||| |||| |||    
T  11464266 ttcaatcaaagatttgggcgtcaacgttgcagatccggaggcaatggatattccggtcactttaatttcatcatatatttttgtaggcattatgccgtta 11464365  T
Q  107 tatattattaacttgggtgttgtgagtttgttc 139  Q
    |||  ||||||||||| || |||||||||||||    
T  11464366 tatgctattaacttggatgatgtgagtttgttc 11464398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 21237873 - 21238002
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||||| |||||||||||| ||| ||||||||||| ||||||||  || | || |||||||||||| |||||  | |||||||   ||||| | || |    
T  21237873 attcaatcaatgatttggacgtcaatgttgcagatccagaagcatgtgtactctgttgatttagattttatcat--tgtttgtaggatttttgtcgttgt 21237970  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    ||  ||||||| ||||||||||||||||||||    
T  21237971 atcctattaacatgggtgttgtgagtttgttc 21238002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 9 - 139
Target Start/End: Complemental strand, 23851483 - 23851351
Alignment:
Q  9 ttcaatcgatgatttggacgccaacgttgcagatccggaagc-atgaatattatggtgatttagatttcatcatat-tttttgtagtcattttgccatta 106  Q
    ||||||| | |||||||||| |||||||||||||||||| || ||| |||||  ||| | ||  |||||||||||| ||||||||| |||| || | |||    
T  23851483 ttcaatcaaagatttggacgtcaacgttgcagatccggaggcaatggatatttcggtaactttaatttcatcatatatttttgtaggcattatgtcgtta 23851384  T
Q  107 tatattattaacttgggtgttgtgagtttgttc 139  Q
    |||  ||||||||| | ||||||||||||||||    
T  23851383 tatgctattaacttagatgttgtgagtttgttc 23851351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 20 - 139
Target Start/End: Complemental strand, 25191059 - 25190940
Alignment:
Q  20 atttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattatatattattaact 119  Q
    |||||| || |||||||| |||||||||||||||   |||  | ||| |||| ||| |||||||| ||||||| |||||| | ||| |||  ||||||||    
T  25191059 atttgggcgtcaacgttgaagatccggaagcatgtgaattgcgatgacttaggttttatcatattatttgtaggcatttttctattttatgctattaact 25190960  T
Q  120 tgggtgttgtgagtttgttc 139  Q
    |||||| |||||||||||||    
T  25190959 tgggtgctgtgagtttgttc 25190940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 40619079 - 40618948
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||||| || |||||| || ||||||||||||||| ||||||||| ||||  |  || ||| |||| |||||||| | ||||  ||||||||| || |    
T  40619079 attcaatcaataatttgggcgtcaacgttgcagatccagaagcatgagtatttcgcagacttaaattttatcatattatgtgtatgcattttgccgttgt 40618980  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    ||  |||||||||||| |||||| ||||||||    
T  40618979 atgctattaacttgggggttgtgcgtttgttc 40618948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 9637406 - 9637284
Alignment:
Q  17 atgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattatatattatta 116  Q
    ||||||||  || ||||||||||||| ||||| ||||| ||||  ||| | |||| ||| |||||||| ||| ||| ||||||| | || |||  |||||    
T  9637406 atgatttgagcgtcaacgttgcagattcggaaacatgagtatttcggtaacttaggttttatcatattatttttaggcattttgtcgttgtatgctatta 9637307  T
Q  117 acttgggtgttgtgagtttgttc 139  Q
    ||||||||||| |||||||||||    
T  9637306 acttgggtgttatgagtttgttc 9637284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 34 - 138
Target Start/End: Complemental strand, 18846446 - 18846338
Alignment:
Q  34 gttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattata---tat-tattaacttgggtgttgt 129  Q
    |||| ||| |||||| ||||| |||||||||||||||||||| || ||||| ||||||| |||||||| ||| ||   ||| ||||||||||  ||||||    
T  18846446 gttgtagacccggaaacatgagtattatggtgatttagattttattatattatttgtaggcattttgctattgtatgctatatattaacttgattgttgt 18846347  T
Q  130 gagtttgtt 138  Q
    |||||||||    
T  18846346 gagtttgtt 18846338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 40211299 - 40211177
Alignment:
Q  17 atgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattatatattatta 116  Q
    ||||||||| || |||||||| |||||||||||||||| ||||  | ||| || ||||| |||||||| ||||||  |||| |||| || |||  |||||    
T  40211299 atgatttgggcgtcaacgttgtagatccggaagcatgagtatttcgttgacttggattttatcatattatttgtaagcattatgccgttgtatgctatta 40211200  T
Q  117 acttgggtgttgtgagtttgttc 139  Q
    |  |||||| |||||||||||||    
T  40211199 atctgggtgatgtgagtttgttc 40211177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 8 - 136
Target Start/End: Complemental strand, 17693620 - 17693491
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcatttt-gccatta 106  Q
    |||||| | ||||||||| || |||| |||||||||||||||||||| ||||  | ||| |||  ||| |||||||| ||||||| |||||| |   ||     
T  17693620 attcaaccaatgatttgggcgtcaacattgcagatccggaagcatgagtatttcgatgacttatgttttatcatattatttgtaggcatttttgttgttg 17693521  T
Q  107 tatattattaacttgggtgttgtgagtttg 136  Q
    ||| |||||||||||| |||||||||||||    
T  17693520 tatgttattaacttggatgttgtgagtttg 17693491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 6 - 139
Target Start/End: Complemental strand, 33347529 - 33347396
Alignment:
Q  6 agattcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccatt 105  Q
    |||||||||| ||||||| | || | ||||||| |||||| |||||||  ||||  ||||| | ||| || |||||||| ||||||| ||||||| ||||    
T  33347529 agattcaatcaatgatttaggcgtcgacgttgcggatccgaaagcatgggtatttcggtgactcagaatttatcatattatttgtaggcattttgtcatt 33347430  T
Q  106 atatattattaacttgggtgttgtgagtttgttc 139  Q
     |||  |||||| || |||||| |||||||||||    
T  33347429 gtatgctattaaattaggtgttatgagtttgttc 33347396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 8 - 100
Target Start/End: Original strand, 5333512 - 5333604
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttg 100  Q
    |||||||| || |||||| || |||||||| |||||| ||||||||| |||| | |||||||||||||  ||||||| ||||||  |||||||    
T  5333512 attcaatcaattatttgggcgtcaacgttgtagatccagaagcatgagtattctagtgatttagattttgtcatattatttgtatgcattttg 5333604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 72 - 139
Target Start/End: Complemental strand, 9498524 - 9498456
Alignment:
Q  72 atttcatcatat-tttttgtagtcattttgccattatatattattaacttgggtgttgtgagtttgttc 139  Q
    |||||||||||| ||||||||| |||| |||||||||||  ||||||||||| || |||||||||||||    
T  9498524 atttcatcatatatttttgtaggcattatgccattatatgctattaacttggatgctgtgagtttgttc 9498456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 31 - 139
Target Start/End: Complemental strand, 39646169 - 39646063
Alignment:
Q  31 aacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattatatattattaacttgggtgttgtg 130  Q
    ||||||||| ||||| |||||||| |||| | |||| ||| |||| |||||||| |||||||  ||||||   |||||| || |||||||||||||||||    
T  39646169 aacgttgcaaatccg-aagcatga-tattcttgtgacttaaatttaatcatattatttgtagctattttgttgttatatgttgttaacttgggtgttgtg 39646072  T
Q  131 agtttgttc 139  Q
    |||||||||    
T  39646071 agtttgttc 39646063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 6 - 53
Target Start/End: Original strand, 8981244 - 8981291
Alignment:
Q  6 agattcaatcgatgatttggacgccaacgttgcagatccggaagcatg 53  Q
    ||||||||| ||||||||||||| ||||||| ||||||||||||||||    
T  8981244 agattcaattgatgatttggacgtcaacgttacagatccggaagcatg 8981291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 63 - 138
Target Start/End: Complemental strand, 27498317 - 27498242
Alignment:
Q  63 gtgatttagatttcatcatattttttgtagtcattttgccattatatattattaacttgggtgttgtgagtttgtt 138  Q
    ||||||||||||| |||||||| ||| ||| ||||||| | |||||| |||| |||||||||||| |||| |||||    
T  27498317 gtgatttagattttatcatattatttatagacattttgtctttatatgttatgaacttgggtgttatgagcttgtt 27498242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 8 - 131
Target Start/End: Original strand, 29939383 - 29939506
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||| | ||||||||| ||  ||||||||| ||||  |||||||| ||||   |||| |||| ||| |||||||| ||||||||||||||||| || |    
T  29939383 attcaaccaatgatttgggcgttaacgttgcatatccataagcatgagtatttcagtgacttaggttttatcatattatttgtagtcattttgccgttgt 29939482  T
Q  108 atattattaacttgggtgttgtga 131  Q
    ||  ||||||||| | ||||||||    
T  29939483 atgatattaacttagatgttgtga 29939506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 68 - 139
Target Start/End: Complemental strand, 30568267 - 30568196
Alignment:
Q  68 ttagatttcatcatattttttgtagtcattttgccattatatattattaacttgggtgttgtgagtttgttc 139  Q
    |||| ||| ||||| || ||||||| ||||||||| || |||  ||||||||||||||||||||||||||||    
T  30568267 ttaggttttatcatgttatttgtaggcattttgccgttttatgctattaacttgggtgttgtgagtttgttc 30568196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 9 - 138
Target Start/End: Complemental strand, 43890113 - 43889982
Alignment:
Q  9 ttcaatcgatgatttggacgccaacgttgcagatccggaagca-tgaatattatggtgatttagatttcatcatat-tttttgtagtcattttgccatta 106  Q
    ||||||| | ||||||| || |||||||||||||||||| ||| || |||||  ||| | ||  |||||||||||| ||||||||| |||| |||| |||    
T  43890113 ttcaatcaaagatttgggcgtcaacgttgcagatccggaggcaatggatattccggtcactttaatttcatcatatatttttgtaggcattatgccgtta 43890014  T
Q  107 tatattattaacttgggtgttgtgagtttgtt 138  Q
    |||  ||||||||||| || ||||| ||||||    
T  43890013 tatgctattaacttggatgctgtgattttgtt 43889982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 32724471 - 32724338
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagc-atgaatattatggtgatttagatttcatcatat-tttttgtagtcattttgccatt 105  Q
    |||||||| | ||||||| || |||||||||||||||||| || ||| |||||  ||| | ||  || | ||| ||| ||||||||| |||| || | ||    
T  32724471 attcaatcaaagatttgggcgtcaacgttgcagatccggaggccatggatattccggtcactttaatcttatcttatatttttgtaggcattatgtcgtt 32724372  T
Q  106 atatattattaacttgggtgttgtgagtttgttc 139  Q
    ||||| ||||||||||| ||||||||||||||||    
T  32724371 atatactattaacttggatgttgtgagtttgttc 32724338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 19 - 139
Target Start/End: Original strand, 33298960 - 33299081
Alignment:
Q  19 gatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatat-tttttgtagtcattttgccattatatattattaa 117  Q
    ||||||| || ||||||||||||| |||| |||||| |||| | || | ||  |||| ||||||| ||||| ||| |||| |||| ||||||  ||||||    
T  33298960 gatttggtcgtcaacgttgcagatacggatgcatgagtattctagtcactttaattttatcatatatttttataggcattatgccgttatatgctattaa 33299059  T
Q  118 cttgggtgttgtgagtttgttc 139  Q
    ||| | ||||||||||||||||    
T  33299060 cttagatgttgtgagtttgttc 33299081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 42448017 - 42447884
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagc-atgaatattatggtgatttagatttcatcatat-tttttgtagtcattttgccatt 105  Q
    |||||||| | ||||||| || |||||||||||||||| | || |||||||||   |  | ||  |||| ||||||| ||||||||| |||| |||| ||    
T  42448017 attcaatcaaagatttgggcgtcaacgttgcagatccgaaggccatgaatattccagacactttaattttatcatatatttttgtaggcattatgccgtt 42447918  T
Q  106 atatattattaacttgggtgttgtgagtttgttc 139  Q
    ||||  ||||||||||| ||||||||||||||||    
T  42447917 atatgctattaacttggatgttgtgagtttgttc 42447884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 94
Target Start/End: Complemental strand, 14544897 - 14544823
Alignment:
Q  20 atttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtc 94  Q
    |||||| || ||||||||||||||||||||||||   |||  ||||| ||| |||| |||||||| |||||||||    
T  14544897 atttgggcgtcaacgttgcagatccggaagcatgggaatttcggtgacttaaattttatcatattatttgtagtc 14544823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 135
Target Start/End: Complemental strand, 26469152 - 26469029
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||||| ||||||||| || ||||||||   ||| | | |||||  |||| ||||||||||||||| |||||||| |||||||  |||||| | ||||    
T  26469152 attcaatcaatgatttgggcgtcaacgttgtgcatctgaatgcatgtgtattctggtgatttagattttatcatattatttgtaggtattttgtcgttat 26469053  T
Q  108 atattattaacttgggtgttgtgagttt 135  Q
    |    |||||||| || |||||||||||    
T  26469052 a----attaacttaggcgttgtgagttt 26469029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 75
Target Start/End: Original strand, 10331172 - 10331241
Alignment:
Q  6 agattcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagattt 75  Q
    |||||||||| || ||||| ||| ||||| || |||||| ||||||||| |||| | |||||||||||||    
T  10331172 agattcaatcaataatttgaacgtcaacggtgtagatccagaagcatgagtattctagtgatttagattt 10331241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 100
Target Start/End: Complemental strand, 28086819 - 28086726
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtga-tttagatttcatcatattttttgtagtcattttg 100  Q
    |||||||| |||||||||| | |||||||||||||||| || |||   ||||   |||| ||||||||| |||||||| ||||||| |||||||    
T  28086819 attcaatcaatgatttggaagtcaacgttgcagatccgtaaacattggtatttcagtgattttagattttatcatattatttgtaggcattttg 28086726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 29777313 - 29777446
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccgga-agcatgaatattatggtgatttagatttcatcatat-tttttgtagtcattttgccatt 105  Q
    |||||||| | |||||||||| |||| ||||||||||||| | |||| |||||  ||||| ||  || | ||||||| |||||| || |||| || | ||    
T  29777313 attcaatcaaagatttggacgtcaacattgcagatccggagaccatggatattccggtgactttaatattatcatatatttttggaggcattatgtcgtt 29777412  T
Q  106 atatattattaacttgggtgttgtgagtttgttc 139  Q
    ||||  ||||||||||| || |||||||||||||    
T  29777413 atatgctattaacttggatgctgtgagtttgttc 29777446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 72 - 139
Target Start/End: Original strand, 2656029 - 2656097
Alignment:
Q  72 atttcatcatat-tttttgtagtcattttgccattatatattattaacttgggtgttgtgagtttgttc 139  Q
    |||||||||||| ||||||||| |||| |||  ||||||  ||||||||||| || |||||||||||||    
T  2656029 atttcatcatatatttttgtaggcattatgctgttatatgctattaacttggatgctgtgagtttgttc 2656097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 72 - 139
Target Start/End: Original strand, 11267167 - 11267235
Alignment:
Q  72 atttcatcatat-tttttgtagtcattttgccattatatattattaacttgggtgttgtgagtttgttc 139  Q
    |||| ||||||| ||||||||| |||| |||| ||||||  ||||||||||| || |||||||||||||    
T  11267167 attttatcatatatttttgtaggcattatgccgttatatgctattaacttggatgctgtgagtttgttc 11267235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 72 - 139
Target Start/End: Original strand, 16794450 - 16794518
Alignment:
Q  72 atttcatcatat-tttttgtagtcattttgccattatatattattaacttgggtgttgtgagtttgttc 139  Q
    |||| ||||||| ||||||||| |||| || | ||||||  ||||||||||| ||||||||||||||||    
T  16794450 attttatcatatatttttgtagacattatgacgttatatggtattaacttggatgttgtgagtttgttc 16794518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 72; Significance: 1e-32; HSPs: 53)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 546113 - 546244
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||||| ||||||||| || ||||||||||||||| ||||||||  |||| ||||| |||||||||||||||||| ||||||| ||||||||| || |    
T  546113 attcaatcaatgatttgggcgtcaacgttgcagatccagaagcatgggtattctggtggtttagatttcatcatattatttgtaggcattttgccgttgt 546212  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    ||  |||||||||||||| |||||||||||||    
T  546213 atgctattaacttgggtgctgtgagtttgttc 546244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 3913582 - 3913451
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||| | ||||||| |||| ||||||||||||||| ||||||||  ||||  |||||||||| ||| |||||||| ||||||| |||||||||||| |    
T  3913582 attcaagcaatgatttagacgtcaacgttgcagatccagaagcatgggtatttcggtgatttaggttttatcatattatttgtaggcattttgccattgt 3913483  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    ||  ||||||||||||||||||||||||||||    
T  3913482 atgctattaacttgggtgttgtgagtttgttc 3913451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 14801909 - 14802040
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||||| ||||||||| || ||||||||||||||| |||| |||  |||| |||||||||||||||||||||||| ||||||| ||||||||| || |    
T  14801909 attcaatcaatgatttgggcgtcaacgttgcagatccagaagaatgtgtattttggtgatttagatttcatcatattatttgtaggcattttgccgttgt 14802008  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    ||  ||||||||||| || |||||||||||||    
T  14802009 atgctattaacttggatgctgtgagtttgttc 14802040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 30493614 - 30493745
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||||| |||||||||||| |||||||||| |||||||||||||  |||| |||||||||| |||| ||||| || ||||||| ||||||||| || |    
T  30493614 attcaatcaatgatttggacgtcaacgttgcaaatccggaagcatgggtattttggtgatttatattttatcatgttgtttgtaggcattttgccgttgt 30493713  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    ||  ||||||| |||||||||||| |||||||    
T  30493714 atgctattaacctgggtgttgtgaatttgttc 30493745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 8 - 138
Target Start/End: Original strand, 8102808 - 8102938
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    ||||| || ||||||||| || ||||||||||||||| ||| |||||||||| || |||||||||||| |||||||| ||||||| ||||||||| |       
T  8102808 attcattcaatgatttgggcgtcaacgttgcagatccagaaacatgaatattctgatgatttagattttatcatattatttgtaggcattttgccgtgga 8102907  T
Q  108 atattattaacttgggtgttgtgagtttgtt 138  Q
    || ||||||||||||||| ||||||||||||    
T  8102908 atgttattaacttgggtgctgtgagtttgtt 8102938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 31296902 - 31297033
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    ||||||| |||||||| |||| ||||||||||||||||||||||||| |||| |||||||||| |||| |||||||| ||||||| ||||||| | || |    
T  31296902 attcaattgatgatttagacgtcaacgttgcagatccggaagcatgagtattctggtgatttatattttatcatattgtttgtaggcattttgtcgttgt 31297001  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    ||  |||||| |||| || | |||||||||||    
T  31297002 atgctattaatttggatgatttgagtttgttc 31297033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 6 - 139
Target Start/End: Complemental strand, 7976197 - 7976064
Alignment:
Q  6 agattcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccatt 105  Q
    |||||||||  || ||||||||| |||||||| |||||||||||||||  |||| |||||||||| |||| ||||||   ||||||| ||||||||| ||    
T  7976197 agattcaattaattatttggacgtcaacgttgtagatccggaagcatgggtattctggtgatttaaattttatcataccgtttgtaggcattttgccgtt 7976098  T
Q  106 atatattattaacttgggtgttgtgagtttgttc 139  Q
     |||  ||||||||| ||||||||||||||||||    
T  7976097 gtatgctattaacttaggtgttgtgagtttgttc 7976064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 8 - 136
Target Start/End: Original strand, 12170550 - 12170678
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||| | |||||||||| | ||||||||||||||||||||||||  ||||  |||||||||| ||| |||||||| ||||||| ||||||||  || |    
T  12170550 attcaagcaatgatttggatgtcaacgttgcagatccggaagcatgggtatttcggtgatttaggtttgatcatattatttgtaggcattttgctgttgt 12170649  T
Q  108 atattattaacttgggtgttgtgagtttg 136  Q
    ||  |||||||||||||| ||||||||||    
T  12170650 atgctattaacttgggtgctgtgagtttg 12170678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 606286 - 606417
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||| | |||||||||||  ||||||||||||||||||| ||||  ||||  ||||| |||  ||| |||||||| ||||||| |||||||||||| |    
T  606286 attcaaccaatgatttggacatcaacgttgcagatccggaaacatgggtatttcggtgacttaagttttatcatattatttgtaggcattttgccattgt 606385  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    ||  |||||||||||||| |||||||||||||    
T  606386 atgctattaacttgggtgctgtgagtttgttc 606417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 8 - 105
Target Start/End: Complemental strand, 32191738 - 32191641
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccatt 105  Q
    |||||||| ||||||||||||||||||||||| ||||| ||||||||  ||| ||||||||||||||| ||||||   ||||||| ||||||||||||    
T  32191738 attcaatcaatgatttggacgccaacgttgcatatccgaaagcatgagcattctggtgatttagattttatcatacaatttgtaggcattttgccatt 32191641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 32327225 - 32327097
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||| | ||||||| ||||  |||||||||||||||||||||||| || | ||||||||||| ||| |||||||| ||||||| |||||||||    |    
T  32327225 attcaagcaatgattttgacgttaacgttgcagatccggaagcatgagtagtttggtgatttaggttttatcatattatttgtaggcattttgcc---gt 32327129  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    ||  |||||||||||||| |||||||||||||    
T  32327128 atgctattaacttgggtgctgtgagtttgttc 32327097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 127751 - 127880
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||| ||| ||||||||| || ||||||||||||| ||||||||||| ||||  |||||||||||||| |||||||| ||||||| ||||||||| |  |    
T  127751 attcgatcaatgatttgggcgtcaacgttgcagattcggaagcatgagtatttcggtgatttagattttatcatattatttgtaggcattttgccgt--t 127848  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
     |  ||||||||||| || |||||||||||||    
T  127849 gtgctattaacttggttgctgtgagtttgttc 127880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 6 - 141
Target Start/End: Original strand, 29743077 - 29743215
Alignment:
Q  6 agattcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccatt 105  Q
    |||||||||| ||||  ||| || |||||||||||||||||||||  || |||| ||||||||||||| | |||||||| ||| ||| ||||||| | ||    
T  29743077 agattcaatcaatgacgtgggcgtcaacgttgcagatccggaagctagagtattctggtgatttagatcttatcatattatttataggcattttgtcgtt 29743176  T
Q  106 ---atatattattaacttgggtgttgtgagtttgttctc 141  Q
       |||| |||||||||||| ||||||||||||||||||    
T  29743177 gtaatatgttattaacttggttgttgtgagtttgttctc 29743215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 17 - 137
Target Start/End: Original strand, 34018651 - 34018771
Alignment:
Q  17 atgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattatatattatta 116  Q
    ||||||||| || ||||||||||||||||||||||||| ||||   |||| |||  ||| |||||||| ||||||| |||||| |  || ||||||||||    
T  34018651 atgatttgggcgtcaacgttgcagatccggaagcatgagtatttcagtgacttatgttttatcatattatttgtaggcattttactgttgtatattatta 34018750  T
Q  117 acttgggtgttgtgagtttgt 137  Q
     ||||||||||||||||||||    
T  34018751 tcttgggtgttgtgagtttgt 34018771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 9 - 100
Target Start/End: Original strand, 1523491 - 1523582
Alignment:
Q  9 ttcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttg 100  Q
    ||||||| |||||||| ||| ||||||||||||||| ||||||||  |||| ||||||||||||||| |||||||| ||||||| |||||||    
T  1523491 ttcaatcaatgatttgaacgtcaacgttgcagatccagaagcatgggtattctggtgatttagattttatcatattatttgtaggcattttg 1523582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 23128700 - 23128831
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||||| |||||||||| | |||||||| |||||||||||||||  ||||  ||||| |||  ||| |||||||| ||||||| ||||||||| || |    
T  23128700 attcaatcaatgatttggatgtcaacgttgtagatccggaagcatgggtatttcggtgacttaagttttatcatattatttgtaggcattttgccgttgt 23128799  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    ||  |||||| ||||||| |||||||||||||    
T  23128800 atgctattaatttgggtgctgtgagtttgttc 23128831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 29255454 - 29255323
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||||| ||||||||| || ||||||| ||||||||||| ||||  ||||  ||||| |||||||| |||||||| ||||||| |||||  |  || |    
T  29255454 attcaatcaatgatttgggcgtcaacgttacagatccggaaacatgggtatttcggtgacttagattttatcatattatttgtaggcatttcactgttgt 29255355  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    ||  ||||||||||||||||||||||||||||    
T  29255354 atgctattaacttgggtgttgtgagtttgttc 29255323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 30776745 - 30776876
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    ||||| || ||||||||| ||  ||||||||| |||  ||||||||  |||| ||||||||||||||| |||||||| ||||||| ||||||||| |       
T  30776745 attcattcaatgatttgggcgtgaacgttgcaaatctagaagcatgggtattctggtgatttagattttatcatattatttgtaggcattttgccgtgga 30776844  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    ||  ||||||||||||||||||||||||||||    
T  30776845 atgctattaacttgggtgttgtgagtttgttc 30776876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 6 - 84
Target Start/End: Complemental strand, 1933702 - 1933624
Alignment:
Q  6 agattcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatatt 84  Q
    |||||||||| |||||||||||| ||||||||||||||||||| ||||| |||| |||||||||| |||| ||||||||    
T  1933702 agattcaatcaatgatttggacgtcaacgttgcagatccggaaacatgattattctggtgatttatattttatcatatt 1933624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 35001677 - 35001810
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaag-catgaatattatggtgatttagatttcatcatat-tttttgtagtcattttgccatt 105  Q
    |||||||| | |||||||||| |||||||||||||||| | | ||||||||||  ||||| ||  |||| ||||||| ||||||||| |||| |||| ||    
T  35001677 attcaatcaaagatttggacgtcaacgttgcagatccgaaggtcatgaatattccggtgactttaattttatcatatatttttgtaggcattatgccgtt 35001776  T
Q  106 atatattattaacttgggtgttgtgagtttgttc 139  Q
    ||||  ||||||||||| ||||||||||||||||    
T  35001777 atatgctattaacttggatgttgtgagtttgttc 35001810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 20225933 - 20226064
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||||| ||||||| | |||| ||||||||||| | ||||||||| ||||  | ||| ||||| || |||||||| ||||||| ||||||| | || |    
T  20225933 attcaatcaatgattttggcgccgacgttgcagattctgaagcatgagtatttcgatgagttagaatttatcatattatttgtaggcattttgtcgttgt 20226032  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    ||  ||||||||||||| ||||||||||||||    
T  20226033 atgctattaacttgggtattgtgagtttgttc 20226064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 22119917 - 22120048
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||||| ||||||| | |||| ||||||||||| | ||||||||| ||||  | ||| ||||| || |||||||| ||||||| ||||||| | || |    
T  22119917 attcaatcaatgattttggcgccgacgttgcagattctgaagcatgagtatttcgatgagttagaatttatcatattatttgtaggcattttgtcgttgt 22120016  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    ||  ||||||||||||| ||||||||||||||    
T  22120017 atgctattaacttgggtattgtgagtttgttc 22120048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 33053176 - 33053045
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||| | |||||||| ||| ||||||||||||||||||||||||  ||||   |||| |||  ||| |||||||| ||||||| ||||||||| || |    
T  33053176 attcaaccaatgatttgaacgtcaacgttgcagatccggaagcatgggtatttcagtgacttaagttttatcatattatttgtaggcattttgccgttgt 33053077  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    ||  ||||||||||| || |||||||||||||    
T  33053076 atgctattaacttggatgctgtgagtttgttc 33053045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 6 - 100
Target Start/End: Complemental strand, 31852203 - 31852109
Alignment:
Q  6 agattcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttg 100  Q
    ||||| |||| |||||||| ||| ||| ||||||||||||||||||||| |||| |||||||||| |||| |||||||| ||| ||| |||||||    
T  31852203 agattaaatcaatgatttgaacgtcaaagttgcagatccggaagcatgagtattctggtgatttaaattttatcatattatttatagacattttg 31852109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 6 - 139
Target Start/End: Complemental strand, 27097652 - 27097519
Alignment:
Q  6 agattcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccatt 105  Q
    |||||||||| |||||||||||| |||| ||||| ||||| || |||| ||||| ||||||||||||||| |||||||| | | ||| |||||| |||      
T  27097652 agattcaatcaatgatttggacgtcaacattgcaaatccgaaaacatggatattttggtgatttagattttatcatattatctctaggcattttaccagc 27097553  T
Q  106 atatattattaacttgggtgttgtgagtttgttc 139  Q
     |||  |||||||||| || |||||| |||||||    
T  27097552 gtatgctattaacttgagtattgtgactttgttc 27097519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 679191 - 679321
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||||| ||||||||  ||||||| ||||| ||| ||||||||||||||| ||  ||||||||||| |||||||| || | |  ||||||| | || |    
T  679191 attcaatcaatgatttgagcgccaactttgcaaatctggaagcatgaatattctgacgatttagattttatcatattattcgcaaacattttg-cgttgt 679289  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    ||  ||||||||| ||||||||||||||||||    
T  679290 atgctattaacttaggtgttgtgagtttgttc 679321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 8 - 138
Target Start/End: Complemental strand, 26588480 - 26588350
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||||  |||||||||| | |||||||||| |||| ||||||||| ||||  |||||||| ||||| |||||||| ||| ||| ||||||||  || |    
T  26588480 attcaattaatgatttggatgtcaacgttgcaaatccagaagcatgagtatttgggtgattttgattttatcatattatttttagacattttgctgttgt 26588381  T
Q  108 atattattaacttgggtgttgtgagtttgtt 138  Q
    ||  | ||||||||| ||| |||||||||||    
T  26588380 atgctcttaacttggatgtcgtgagtttgtt 26588350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 16419245 - 16419378
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagc-atgaatattatggtgatttagatttcatcatat-tttttgtagtcattttgccatt 105  Q
    |||||||| | |||||||||| |||||||||||||||||| || ||| |||||  ||||| ||  |||| ||||||| ||||||||| |||| |||| |     
T  16419245 attcaatcaaagatttggacgtcaacgttgcagatccggaggcaatggatattccggtgactttaattttatcatatatttttgtaggcattatgccgtc 16419344  T
Q  106 atatattattaacttgggtgttgtgagtttgttc 139  Q
    ||||  ||||||||||  ||||||||||||||||    
T  16419345 atatgctattaacttgattgttgtgagtttgttc 16419378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 6 - 139
Target Start/End: Original strand, 28981257 - 28981390
Alignment:
Q  6 agattcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccatt 105  Q
    |||||||||| ||||| | |||| |||| ||||||||||| ||| |||  |||| |||| |||||||||| ||||||||  ||||||  ||||||   ||    
T  28981257 agattcaatcaatgatcttgacgtcaacattgcagatccgaaagtatgggtattttggtcatttagattttatcatattgcttgtaggaattttgttgtt 28981356  T
Q  106 atatattattaacttgggtgttgtgagtttgttc 139  Q
     |||  ||||||||| ||||||||||||||||||    
T  28981357 gtatgctattaactttggtgttgtgagtttgttc 28981390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 29319886 - 29319754
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatatt-ttttgtagtcattttgccatta 106  Q
    |||||| | |||||||| ||| |||||||||| |||||||||||||  |||| |||||| |||  ||| |||||||| |||||||  |||||| || ||     
T  29319886 attcaaccaatgatttgaacgtcaacgttgcaaatccggaagcatgtgtattttggtgacttaagttttatcatattattttgtaagcattttaccgttg 29319787  T
Q  107 tatattattaacttgggtgttgtgagtttgttc 139  Q
    |||  ||||||||||| |||| |||||||||||    
T  29319786 tatgctattaacttggttgttatgagtttgttc 29319754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 19 - 139
Target Start/End: Complemental strand, 23947297 - 23947174
Alignment:
Q  19 gatttggacgccaacgttgcagatccggaagc-atgaatattatggtga-tttagatttcatcatat-tttttgtagtcattttgccattatatattatt 115  Q
    ||||||| || ||| |||||||||||||| || ||| ||||| |||| | |||| |||| ||||||| ||||||||| |||| |||| ||||||  ||||    
T  23947297 gatttgggcgtcaatgttgcagatccggaggccatggatattctggtcactttaaattttatcatatatttttgtaggcattatgccgttatatgctatt 23947198  T
Q  116 aacttgggtgttgtgagtttgttc 139  Q
    ||||||| ||||||||||||||||    
T  23947197 aacttggatgttgtgagtttgttc 23947174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 131
Target Start/End: Complemental strand, 34185701 - 34185578
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||||| |||||||||||| |||| ||||| | |  ||| ||||  |||| ||||||||||||||| |||||||| |||||||  |||||| | ||||    
T  34185701 attcaatcaatgatttggacgtcaactttgcaaaactagaatcatgggtattctggtgatttagattttatcatattatttgtaggtattttgtcgttat 34185602  T
Q  108 atattattaacttgggtgttgtga 131  Q
     || ||| |||||||||| |||||    
T  34185601 gtactatcaacttgggtgatgtga 34185578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 9 - 139
Target Start/End: Original strand, 9380106 - 9380236
Alignment:
Q  9 ttcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattata 108  Q
    ||||||| ||||||||   | ||| |||| |||| | ||||||||  |||| ||||||||||||||| |||||||| ||||||  ||||||| | || ||    
T  9380106 ttcaatcaatgatttgtgtgtcaatgttgtagattcagaagcatgggtattttggtgatttagattttatcatattatttgtatgcattttgtcgttgta 9380205  T
Q  109 tattattaacttgggtgttgtgagtttgttc 139  Q
    |  ||||| ||||| ||||||||||||||||    
T  9380206 ttctattatcttggatgttgtgagtttgttc 9380236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 8 - 138
Target Start/End: Complemental strand, 30608523 - 30608393
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||| | |||||||||  | |||||||||||||| |||| ||||  ||||  ||||| ||| |||| |||||||| ||||||| |||||| || || |    
T  30608523 attcaaccaatgatttgggtgtcaacgttgcagatctggaatcatgggtatttcggtgacttatattttatcatattatttgtaggcattttaccgttgt 30608424  T
Q  108 atattattaacttgggtgttgtgagtttgtt 138  Q
    ||  ||||||||||| ||||||||| |||||    
T  30608423 atgctattaacttggatgttgtgagattgtt 30608393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 8 - 101
Target Start/End: Original strand, 3355199 - 3355292
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgc 101  Q
    |||||||  |||||||||||| |||| |||||||||||||||||||| ||||   |||| |||||||| ||| |||| |||| || ||||||||    
T  3355199 attcaatgaatgatttggacgtcaactttgcagatccggaagcatgagtatttcagtgacttagattttatcctattgtttggagacattttgc 3355292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 10228766 - 10228899
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaag-catgaatattatggtgatttagatttcatcatat-tttttgtagtcattttgccatt 105  Q
    |||||||| | |||||||||| |||||||||||||||||| | |||| |||||  ||||| ||  |||| ||||||| ||||||||| |||| |||| ||    
T  10228766 attcaatcaaagatttggacgtcaacgttgcagatccggaggccatggatattccggtgactttaattttatcatatatttttgtaggcattatgccgtt 10228865  T
Q  106 atatattattaacttgggtgttgtgagtttgttc 139  Q
    ||||  ||||||||||| |  ||| |||||||||    
T  10228866 atatgctattaacttggatactgtaagtttgttc 10228899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 31 - 139
Target Start/End: Complemental strand, 67986 - 67878
Alignment:
Q  31 aacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattatatattattaacttgggtgttgtg 130  Q
    |||||||||||||||||| ||||  ||||  || || |||  ||| |||||||| ||| ||| ||||||||| || |||  |||||||||||||| ||||    
T  67986 aacgttgcagatccggaaacatgggtatttcggcgacttaagttttatcatattatttataggcattttgccgttgtatgctattaacttgggtgctgtg 67887  T
Q  131 agtttgttc 139  Q
    |||||||||    
T  67886 agtttgttc 67878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 9 - 139
Target Start/End: Complemental strand, 7881091 - 7880959
Alignment:
Q  9 ttcaatcgatgatttggacgccaacgttgcagatccggaagca-tgaatattatggtgatttagatttcatcatat-tttttgtagtcattttgccatta 106  Q
    ||||||| | ||||||| || |||||||||||||||||| ||| || |||||  ||| | ||  |||||||||||| ||||||||| |||| |||| |||    
T  7881091 ttcaatcaaagatttgggcgtcaacgttgcagatccggaggcaatggatattccggtcactttaatttcatcatatatttttgtaggcattatgccgtta 7880992  T
Q  107 tatattattaacttgggtgttgtgagtttgttc 139  Q
    |||  ||||||||||| || ||||| |||||||    
T  7880991 tatgctattaacttggatgctgtgactttgttc 7880959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 72 - 139
Target Start/End: Original strand, 17334905 - 17334973
Alignment:
Q  72 atttcatcatat-tttttgtagtcattttgccattatatattattaacttgggtgttgtgagtttgttc 139  Q
    |||||||||||| ||||||||| |||| |||| ||||||  ||||||||||| ||||||||||||||||    
T  17334905 atttcatcatatatttttgtaggcattatgccgttatatgctattaacttggatgttgtgagtttgttc 17334973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 139
Target Start/End: Original strand, 8497055 - 8497188
Alignment:
Q  9 ttcaatcgatgatttggacgccaacgttgcagatccggaagca-tgaatattatggtgatttagatttcatcatat--tttttgtagtcattttgccatt 105  Q
    ||||||| | ||||||| || ||||||||||||||| || ||| || |||||  ||| | ||  ||||||||||||  ||||||||| |||| |||| ||    
T  8497055 ttcaatcaaagatttgggcggcaacgttgcagatcctgatgcaatggatattccggtcactttaatttcatcatatattttttgtaggcattatgccgtt 8497154  T
Q  106 atatattattaacttgggtgttgtgagtttgttc 139  Q
    ||||  ||||||||||| || |||||||||||||    
T  8497155 atatgctattaacttggatgctgtgagtttgttc 8497188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 77 - 139
Target Start/End: Complemental strand, 9341590 - 9341528
Alignment:
Q  77 atcatattttttgtagtcattttgccattatatattattaacttgggtgttgtgagtttgttc 139  Q
    |||||||| ||||||| ||||||| | || |||  ||||||||||||||||||||||||||||    
T  9341590 atcatattgtttgtaggcattttgtcgttgtatgctattaacttgggtgttgtgagtttgttc 9341528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 139
Target Start/End: Original strand, 4088548 - 4088680
Alignment:
Q  9 ttcaatcgatgatttggacgccaacgttgcagatccggaagc-atgaatattatggtgatttagatttcatcatat-tttttgtagtcattttgccatta 106  Q
    ||||||| | ||||||| || |||||||||||||||||| || ||| |||||  ||| | ||  |||| ||||||| ||||||||| |||| |||| |||    
T  4088548 ttcaatcaaagatttgggcgtcaacgttgcagatccggaggccatggatattccggtcactttaattttatcatatatttttgtaggcattatgccgtta 4088647  T
Q  107 tatattattaacttgggtgttgtgagtttgttc 139  Q
    |||   |||||||||| || |||||||||||||    
T  4088648 tatgccattaacttggatgctgtgagtttgttc 4088680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 72 - 139
Target Start/End: Original strand, 25064388 - 25064456
Alignment:
Q  72 atttcatcatat-tttttgtagtcattttgccattatatattattaacttgggtgttgtgagtttgttc 139  Q
    |||||||||||| ||||||||| |||| || | ||||||  ||||||||||| ||||||||||||||||    
T  25064388 atttcatcatatatttttgtaggcattatgtcgttatatgctattaacttggatgttgtgagtttgttc 25064456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 139
Target Start/End: Complemental strand, 16892784 - 16892673
Alignment:
Q  30 caacgttgcagatccggaagca-tgaatattatggtgatttagatttcatcatat-tttttgtagtcattttgccattatatattattaacttgggtgtt 127  Q
    |||||||||||||||||| ||| || |||||  ||| | ||  |||||||||||| ||||||||| |||| |||| ||||||  ||||||||||| |||     
T  16892784 caacgttgcagatccggaggcaatggatattccggtcactttaatttcatcatatatttttgtaggcattatgccgttatatgctattaacttggatgtc 16892685  T
Q  128 gtgagtttgttc 139  Q
    || |||||||||    
T  16892684 gtaagtttgttc 16892673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 80 - 139
Target Start/End: Complemental strand, 21426622 - 21426563
Alignment:
Q  80 atattttttgtagtcattttgccattatatattattaacttgggtgttgtgagtttgttc 139  Q
    ||||| ||||||| ||||||||| || |||  |||||||||||||| |||||||||||||    
T  21426622 atattatttgtagacattttgccgttgtatgctattaacttgggtgctgtgagtttgttc 21426563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 135
Target Start/End: Original strand, 30894682 - 30894808
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||| | ||||||||| || ||||||| ||||||| ||||||||  ||||  | ||| |||| ||| |||||||| ||||||||||||||||  || |    
T  30894682 attcaaccaatgatttgggcgtcaacgttacagatccagaagcatgg-tatttcgatgaattaggttttatcatattatttgtagtcattttgctgttgt 30894780  T
Q  108 atattattaacttgggtgttgtgagttt 135  Q
    ||  ||| ||||||| || |||||||||    
T  30894781 atgctatcaacttggatgctgtgagttt 30894808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 32 - 98
Target Start/End: Complemental strand, 4010496 - 4010430
Alignment:
Q  32 acgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattt 98  Q
    ||||||||||||||||||||||| ||||  ||||| ||||| || |||||||| ||| ||| |||||    
T  4010496 acgttgcagatccggaagcatgagtatttcggtgacttagaatttatcatattatttataggcattt 4010430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 12653031 - 12653164
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaag-catgaatattatggt-gatttagatttcatcatat-tttttgtagtcattttgccat 104  Q
    |||||||| | ||||||| || |||||||||||||| ||| | |||| |||||  ||| | |||| |||| ||||||| ||||||||  |||| |||| |    
T  12653031 attcaatcaaagatttggccgtcaacgttgcagatctggaggtcatggatattccggtcgcttta-attttatcatatatttttgtacgcattatgccgt 12653129  T
Q  105 tatatattattaacttgggtgttgtgagtttgttc 139  Q
    |||||  ||||||||||| ||||||||||||||||    
T  12653130 tatatgctattaacttggatgttgtgagtttgttc 12653164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 17237276 - 17237143
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagc-atgaatattatggtgatttagatttcatcatat-tttttgtagtcattttgccatt 105  Q
    |||||||| | |||||||  | |||||||||||||||||| || ||| |||||  ||| | ||  |||| ||||||| ||||||||| |||| || | ||    
T  17237276 attcaatcaaagatttgggtgtcaacgttgcagatccggaggccatggatattccggtcactttaattttatcatatatttttgtaggcattatgtcgtt 17237177  T
Q  106 atatattattaacttgggtgttgtgagtttgttc 139  Q
    ||||  ||||||||||| |||||||||| |||||    
T  17237176 atatgctattaacttggatgttgtgagtgtgttc 17237143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 135
Target Start/End: Original strand, 33110698 - 33110827
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaag-catgaatattatggtgatttagatttcatcatat-tttttgtagtcattttgccatt 105  Q
    |||||||| | ||||| | || |||||||||||||||||| | |||| |||||  ||| | ||  |||| ||||||| ||||||||| |||| || | ||    
T  33110698 attcaatcaaagattttggcgtcaacgttgcagatccggaggtcatggatattccggtcactttaattttatcatatatttttgtaggcattatgtcgtt 33110797  T
Q  106 atatattattaacttgggtgttgtgagttt 135  Q
    ||||  ||||||||||| ||||||||||||    
T  33110798 atatgctattaacttggatgttgtgagttt 33110827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 33740568 - 33740435
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaag-catgaatattatggtgatttagatttcatcatat-tttttgtagtcattttgccatt 105  Q
    |||||||||| ||||||  || |||||||||||||||||| | |||| |||||  ||| | ||  |||| ||||||| ||||| ||| |||| |||| ||    
T  33740568 attcaatcgaagatttgagcgtcaacgttgcagatccggaggccatggatatttcggtcactttaattttatcatatatttttataggcattatgccgtt 33740469  T
Q  106 atatattattaacttgggtgttgtgagtttgttc 139  Q
    ||||  ||||||||||| |  |||||||||||||    
T  33740468 atatgctattaacttggataatgtgagtttgttc 33740435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 92
Target Start/End: Complemental strand, 528346 - 528274
Alignment:
Q  20 atttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtag 92  Q
    |||||| || ||||||||||||| | |||| || | |||| | ||||||||||||| |||||||| |||||||    
T  528346 atttgggcgtcaacgttgcagattctgaagtataagtattctagtgatttagattttatcatattatttgtag 528274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 72 - 139
Target Start/End: Complemental strand, 8028043 - 8027975
Alignment:
Q  72 atttcatcatat-tttttgtagtcattttgccattatatattattaacttgggtgttgtgagtttgttc 139  Q
    |||| ||||||| ||||||||| |||| |||||||||||  ||||||||| | || |||||||||||||    
T  8028043 attttatcatatatttttgtaggcattatgccattatatgctattaactttgatgatgtgagtttgttc 8027975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 15573 - 15704
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||| | |||||||||||| |||| ||||||||||||||||||| |||||  ||||| |||| ||| |||||||| ||||||| ||||||||| ||||    
T  15573 attcaaccaatgatttggacgtcaacattgcagatccggaagcatggatatttcggtgacttaggttttatcatattatttgtaggcattttgccgttat 15672  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    ||  |||||||||||||| |||||||||||||    
T  15673 atgctattaacttgggtgctgtgagtttgttc 15704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 50857 - 50988
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||| | |||||||||||| |||||||||||||||||||||||| |||||  ||||| |||  ||| |||||||| ||||||| |||||||||||| |    
T  50857 attcaaccaatgatttggacgtcaacgttgcagatccggaagcatggatatttcggtgacttaagttttatcatattatttgtaggcattttgccattgt 50956  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    ||  |||||||||||||| |||||||||||||    
T  50957 atgctattaacttgggtgctgtgagtttgttc 50988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 68; Significance: 3e-30; HSPs: 55)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 35133030 - 35133161
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||||| ||||||||| || |||||||||||||||  |||||||| |||| | |||||||||||||||||||||| ||| ||| ||||||||| || |    
T  35133030 attcaatcaatgatttgggcgtcaacgttgcagatccaaaagcatgagtattctagtgatttagatttcatcatattatttctaggcattttgccgttgt 35133129  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    ||  |||||||||||||| |||||||||||||    
T  35133130 atgctattaacttgggtgatgtgagtttgttc 35133161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 9450145 - 9450014
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||| | |||||||||||| ||||||||||||||||||||||||  |||| | ||||||||| ||| |||||||| ||||||| ||||||||| || |    
T  9450145 attcaagcaatgatttggacgtcaacgttgcagatccggaagcatgggtattttagtgatttaggttttatcatattatttgtaggcattttgccgttgt 9450046  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    ||  |||||| || ||||||||||||||||||    
T  9450045 atgctattaatttaggtgttgtgagtttgttc 9450014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 8 - 135
Target Start/End: Original strand, 22743027 - 22743154
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||||| ||||||||  || ||||||||||||||| ||||||||| |||| |||||||||||||||||||||||| ||||| | ||||||||| || |    
T  22743027 attcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgagtattctggtgatttagatttcatcatattatttgttggcattttgccgttgt 22743126  T
Q  108 atattattaacttgggtgttgtgagttt 135  Q
    ||  |||||| |||||||||| ||||||    
T  22743127 atgctattaatttgggtgttgggagttt 22743154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 8 - 138
Target Start/End: Original strand, 46700118 - 46700248
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||||| ||||||||| |  || ||||||||||||||||||||| |||||  ||||| |||||||| |||||||| ||| ||| ||||||||| ||||    
T  46700118 attcaatcaatgatttgggcatcagcgttgcagatccggaagcatggatatttcggtgacttagattttatcatattatttataggcattttgccgttat 46700217  T
Q  108 atattattaacttgggtgttgtgagtttgtt 138  Q
    ||  |||||||| ||||||||||||||||||    
T  46700218 atgctattaactagggtgttgtgagtttgtt 46700248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 12141316 - 12141184
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||| | |||||||||||| ||||||||||||||||||||||||  ||||  ||||| |||||||| |||||||| ||||||  ||||||||| || |    
T  12141316 attcaaccaatgatttggacgtcaacgttgcagatccggaagcatgggtatttcggtgacttagattttatcatattatttgtatgcattttgccgttgt 12141217  T
Q  108 atattattaacttggg-tgttgtgagtttgttc 139  Q
    ||  |||||||||||| ||||||||||||||||    
T  12141216 atgctattaacttgggttgttgtgagtttgttc 12141184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 8 - 138
Target Start/End: Complemental strand, 39171598 - 39171468
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||| | |||||||||||| ||||||||||||||||||||||||  ||||  ||||| |||| ||| |||||||| ||||||| ||||||||| || |    
T  39171598 attcaagcaatgatttggacgtcaacgttgcagatccggaagcatgggtatttcggtgacttaggttttatcatattatttgtaggcattttgccgttgt 39171499  T
Q  108 atattattaacttgggtgttgtgagtttgtt 138  Q
    ||  |||||||||||||| | ||||||||||    
T  39171498 atgctattaacttgggtgctatgagtttgtt 39171468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 8001554 - 8001423
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||| | |||||||||||| ||||||||||||| ||||| ||||| ||||  ||||| |||| ||| |||||||| ||| ||| ||||||||| || |    
T  8001554 attcaagcaatgatttggacgtcaacgttgcagattcggaatcatgagtatttcggtgacttaggttttatcatattatttataggcattttgccgttgt 8001455  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    ||  |||||||||||||| |||||||||||||    
T  8001454 atgctattaacttgggtgctgtgagtttgttc 8001423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 19296953 - 19297084
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||| | |||||||||||| ||||||||||||||||||||||||  ||||  ||| | |||  ||| |||||||| ||||||| ||||||||  ||||    
T  19296953 attcaaccaatgatttggacgtcaacgttgcagatccggaagcatgggtatttcggtaacttaagttttatcatattatttgtaggcattttgctgttat 19297052  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    ||  |||||| |||||||||||||||||||||    
T  19297053 atgctattaatttgggtgttgtgagtttgttc 19297084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 48316820 - 48316689
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||| | |||||||||||| ||||| ||||||||||||||||||  ||||  || ||||||| ||| |||||||| ||||||| ||||||| | || |    
T  48316820 attcaagcaatgatttggacgtcaacgctgcagatccggaagcatgggtatttcggcgatttaggttttatcatattatttgtaggcattttgtcgttgt 48316721  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    ||  |||||||||||||| |||||||||||||    
T  48316720 atgctattaacttgggtgctgtgagtttgttc 48316689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 8 - 138
Target Start/End: Original strand, 47590394 - 47590524
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||| | ||||||||| || |||||||||| |||||||||||||| ||||  || || |||| ||| |||||||| ||||||| ||||||||| || |    
T  47590394 attcaaccaatgatttgggcgtcaacgttgcacatccggaagcatgagtatttcggcgacttaggttttatcatattatttgtaggcattttgccgttgt 47590493  T
Q  108 atattattaacttgggtgttgtgagtttgtt 138  Q
    |   |||||||||||||||||||||||||||    
T  47590494 aagctattaacttgggtgttgtgagtttgtt 47590524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 17 - 139
Target Start/End: Original strand, 48930799 - 48930921
Alignment:
Q  17 atgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattatatattatta 116  Q
    |||||||||  | ||||||||||||||| ||| |||   |||| |||||||||||||||||||||||| ||||| | ||||||||| || |||  |||||    
T  48930799 atgatttgggtgtcaacgttgcagatccagaaacattggtattctggtgatttagatttcatcatattatttgttggcattttgccgttgtatgctatta 48930898  T
Q  117 acttgggtgttgtgagtttgttc 139  Q
    |||||||| ||||||||||||||    
T  48930899 acttgggtattgtgagtttgttc 48930921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 30 - 139
Target Start/End: Original strand, 48061527 - 48061636
Alignment:
Q  30 caacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattatatattattaacttgggtgttgt 129  Q
    |||||||||||||||  |||||||| ||||  |||||||||| ||| |||||||| ||||||| ||||||||| || |||  |||||||||||||||| |    
T  48061527 caacgttgcagatccttaagcatgagtatttcggtgatttaggttttatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgttat 48061626  T
Q  130 gagtttgttc 139  Q
    ||||||||||    
T  48061627 gagtttgttc 48061636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 37837466 - 37837335
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||| | ||||||||| || ||||||||||||||||||||||||   |||  ||||| |||| ||| ||||||||  |||||| ||||||||| || |    
T  37837466 attcaaccaatgatttgggcgtcaacgttgcagatccggaagcatgtgaatttcggtgacttaggttttatcatattacttgtaggcattttgccgtttt 37837367  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    ||  |||||||||||||| |||||||||||||    
T  37837366 atgctattaacttgggtgctgtgagtttgttc 37837335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 42978693 - 42978824
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||| | ||||||||| || |||||||||||||||||||| |||  ||||  ||||| |||| ||| |||||||| | ||||| ||||||||| || |    
T  42978693 attcaaccaatgatttgggcgtcaacgttgcagatccggaaggatgggtatttcggtgacttaggttttatcatattatatgtaggcattttgccgttgt 42978792  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    ||  ||||||||||||||||||||||| ||||    
T  42978793 atgctattaacttgggtgttgtgagttcgttc 42978824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 45349807 - 45349676
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||| | ||||||| | || |||| ||||||||| |||||||||   |||  |||||||||| ||| |||||||| ||||||| ||||||||| || |    
T  45349807 attcaagcaatgattttggcgtcaacattgcagatctggaagcatgtgaatttcggtgatttaggttttatcatattatttgtaggcattttgccgtttt 45349708  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    ||  ||||||||||||||||||||||||||||    
T  45349707 atgctattaacttgggtgttgtgagtttgttc 45349676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 8 - 134
Target Start/End: Complemental strand, 5000037 - 4999911
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||||| || ||||||||  ||||||||| |||| ||||||||||||||| |||||||||| |||| |||||||| ||| ||| ||||||  | || |    
T  5000037 attcaatcaattatttggacttcaacgttgctgatctggaagcatgaatattctggtgatttaaattttatcatattatttatagacattttttcgttgt 4999938  T
Q  108 atattattaacttgggtgttgtgagtt 134  Q
    || ||||| |||||||||||| |||||    
T  4999937 atgttattgacttgggtgttgcgagtt 4999911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 13796928 - 13796806
Alignment:
Q  17 atgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattatatattatta 116  Q
    ||||||||  || ||||||||||||||||||||||||| ||||  ||||| |||  ||| |||||||| ||||||| ||||||| | || |||  |||||    
T  13796928 atgatttgaccgtcaacgttgcagatccggaagcatgagtatttaggtgacttaagttttatcatattatttgtaggcattttgtcgttgtatgctatta 13796829  T
Q  117 acttgggtgttgtgagtttgttc 139  Q
    |||||| ||||||||||||||||    
T  13796828 acttggatgttgtgagtttgttc 13796806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 9 - 99
Target Start/End: Complemental strand, 24069401 - 24069311
Alignment:
Q  9 ttcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcatttt 99  Q
    ||||||| |||||||| ||| |||||||||||| ||||||||||||  ||| ||||||||||||||| |||||||| ||||||| ||||||    
T  24069401 ttcaatcaatgatttgaacgtcaacgttgcagacccggaagcatgaggattctggtgatttagattttatcatattatttgtaggcatttt 24069311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 18 - 139
Target Start/End: Complemental strand, 28044754 - 28044633
Alignment:
Q  18 tgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattatatattattaa 117  Q
    ||||||| ||| ||||||||||||||||||| ||||  ||||  |||||||||| ||| |||||||| ||| ||| ||||||||| || |||  ||||||    
T  28044754 tgatttgaacgtcaacgttgcagatccggaaacatgggtatttcggtgatttaggttttatcatattatttttagacattttgccgttgtatgctattaa 28044655  T
Q  118 cttgggtgttgtgagtttgttc 139  Q
    ||||| |||| |||||||||||    
T  28044654 cttggatgttatgagtttgttc 28044633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 19404765 - 19404634
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||||| ||||||||| || ||| ||||||||||||||||||||| ||||   |||| |||||||| |||||||| ||||||| | ||||||| ||      
T  19404765 attcaatcaatgatttgggcgtcaatgttgcagatccggaagcatgagtatttcagtgacttagattttatcatattatttgtaggctttttgccgttgc 19404666  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    |   ||||||||||| || |||||||||||||    
T  19404665 acgctattaacttggatgctgtgagtttgttc 19404634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 34899615 - 34899484
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||| | |||||||||||| |||||||||| || ||||||||||  ||||  ||||| |||  ||| |||||||| ||||||  ||||||||| || |    
T  34899615 attcaaccaatgatttggacgtcaacgttgcaaattcggaagcatgggtatttcggtgacttaagttttatcatattatttgtatgcattttgccgttgt 34899516  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    ||  ||||||||||| ||||||||||||||||    
T  34899515 atgctattaacttggatgttgtgagtttgttc 34899484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 38798864 - 38798995
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||| | ||||||||| || |||| ||| |||||||||||||||   |||  ||||| |||||||| |||||||| ||||||| ||||||||| |  |    
T  38798864 attcaaccaatgatttgggcgtcaacattgaagatccggaagcatgtgaatttcggtgacttagattttatcatattatttgtaggcattttgccgtctt 38798963  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    ||  ||||||||||| ||||||||||||||||    
T  38798964 atgctattaacttggatgttgtgagtttgttc 38798995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 8 - 138
Target Start/End: Original strand, 28476310 - 28476439
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    ||||| || ||||||||| || ||||||||||||||| |||| |||  ||||  |||||||||||||| |||||||| ||||||| ||||||||| |       
T  28476310 attcattcaatgatttgggcgtcaacgttgcagatccagaagtatgggtattc-ggtgatttagattttatcatattatttgtaggcattttgccgtgca 28476408  T
Q  108 atattattaacttgggtgttgtgagtttgtt 138  Q
    || ||||||||||| ||| ||||||||||||    
T  28476409 atgttattaacttgagtgctgtgagtttgtt 28476439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 17 - 139
Target Start/End: Complemental strand, 41553433 - 41553312
Alignment:
Q  17 atgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattatatattatta 116  Q
    |||||||||||| ||||||||||||||||||| |||  ||||| ||||||||||||||| |||||||  ||| ||   |||||||| || |||  |||||    
T  41553433 atgatttggacgtcaacgttgcagatccggaaacatagatattttggtgatttagattttatcatatcatttatacgtattttgccgttgtatgctatta 41553334  T
Q  117 acttgggtgttgtgagtttgttc 139  Q
    |||| |||| |||||||||||||    
T  41553333 actt-ggtgctgtgagtttgttc 41553312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 433681 - 433548
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagc-atgaatattatggtgatttagatttcatcatat-tttttgtagtcattttgccatt 105  Q
    |||||||| | ||||||||||  ||||||||||||||||| || |||||||||  ||||| ||  |||| ||||||| ||||||||| |||| |||  ||    
T  433681 attcaatcaaagatttggacgttaacgttgcagatccggaggccatgaatattccggtgactttaattttatcatatatttttgtaggcattatgctgtt 433582  T
Q  106 atatattattaacttgggtgttgtgagtttgttc 139  Q
    ||||  ||||||||||| ||||||||||||||||    
T  433581 atatgctattaacttggatgttgtgagtttgttc 433548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 35496165 - 35496032
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagc-atgaatattatggtgatttagatttcatcatat-tttttgtagtcattttgccatt 105  Q
    |||||||||| ||||||| || |||||||||||||||||| || ||| |||||  ||| | ||  |||||||||||| ||||||||| |||| |||| ||    
T  35496165 attcaatcgaagatttgggcgtcaacgttgcagatccggaggccatggatatttcggtcactttaatttcatcatatatttttgtaggcattatgccgtt 35496066  T
Q  106 atatattattaacttgggtgttgtgagtttgttc 139  Q
    ||||  ||||||||||| || |||||||||||||    
T  35496065 atatgctattaacttggatgatgtgagtttgttc 35496032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 8 - 84
Target Start/End: Complemental strand, 24350847 - 24350771
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatatt 84  Q
    |||||||| ||||||||| || ||||||||||||||| ||||||||  |||| |||||||||| |||||||||||||    
T  24350847 attcaatcaatgatttgggcgtcaacgttgcagatccagaagcatgggtattctggtgatttaaatttcatcatatt 24350771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 3 - 139
Target Start/End: Complemental strand, 35665148 - 35665012
Alignment:
Q  3 cagagattcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgcc 102  Q
    ||||||||||||| |||||||| ||| ||| |||||||| ||  |||||||  |||| | ||||||||||||| |||||||| ||| | | ||||||| |    
T  35665148 cagagattcaatcaatgatttgaacgtcaatgttgcagacccataagcatgtgtattttagtgatttagattttatcatattattttttggcattttgtc 35665049  T
Q  103 attatatattattaacttgggtgttgtgagtttgttc 139  Q
     || |||  |||||||||||||  |||||||||||||    
T  35665048 gttgtatgctattaacttgggtactgtgagtttgttc 35665012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 22927860 - 22927727
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaag-catgaatattatggtgatttagatttcatcatat-tttttgtagtcattttgccatt 105  Q
    |||||||| | |||||||||| |||||||||||||||||| | |||| |||||  ||||| ||  |||| ||||||| ||||||||| |||| |||| ||    
T  22927860 attcaatcaaagatttggacgtcaacgttgcagatccggaggccatggatattccggtgactttaattttatcatatatttttgtaggcattatgccgtt 22927761  T
Q  106 atatattattaacttgggtgttgtgagtttgttc 139  Q
    ||||  ||| ||||||| || |||||||||||||    
T  22927760 atatgctatcaacttggttgctgtgagtttgttc 22927727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 30 - 139
Target Start/End: Original strand, 40993262 - 40993371
Alignment:
Q  30 caacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattatatattattaacttgggtgttgt 129  Q
    |||||||||| || | ||||||||  ||||  ||||| |||  ||| |||||||| ||||||| ||||||| | || ||| |||||||||||||||||||    
T  40993262 caacgttgcatattcagaagcatgggtatttcggtgacttaagttttatcatattatttgtaggcattttgtcgttgtatgttattaacttgggtgttgt 40993361  T
Q  130 gagtttgttc 139  Q
    ||||||||||    
T  40993362 gagtttgttc 40993371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 9 - 139
Target Start/End: Original strand, 46822103 - 46822235
Alignment:
Q  9 ttcaatcgatgatttggacgccaacgttgcagatccggaagca-tgaatattatggtgatttagatttcatcatat-tttttgtagtcattttgccatta 106  Q
    ||||||| | ||||||| || |||||||||||||||||| ||| ||||||||  | | | ||  |||||||||||| ||||||||| |||| |||| |||    
T  46822103 ttcaatcaaagatttgggcgtcaacgttgcagatccggaggcaatgaatattccgatcactttaatttcatcatatatttttgtaggcattatgccgtta 46822202  T
Q  107 tatattattaacttgggtgttgtgagtttgttc 139  Q
    |||  ||||||||||| || |||||||||||||    
T  46822203 tatgctattaacttggatgctgtgagtttgttc 46822235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 6 - 75
Target Start/End: Complemental strand, 1769188 - 1769119
Alignment:
Q  6 agattcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagattt 75  Q
    |||||||||| |||||||| |||  ||||||||||||| |||||||||| |||||| || ||||||||||    
T  1769188 agattcaatcaatgatttgaacgtgaacgttgcagatctggaagcatgagtattattgtaatttagattt 1769119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 7 - 84
Target Start/End: Complemental strand, 3224419 - 3224343
Alignment:
Q  7 gattcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatatt 84  Q
    ||||||||  ||||||| |||| ||| |||| ||||||||||| |||| |||||||||||||||||||| ||||||||    
T  3224419 gattcaattaatgattttgacgtcaa-gttgtagatccggaagaatgagtattatggtgatttagattttatcatatt 3224343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 45199023 - 45198890
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagc-atgaatattatggtgatttagatttcatcatat-tttttgtagtcattttgccatt 105  Q
    |||||||| | ||||||| || |||||||||||||||||| || ||| |||||  ||| | || ||||| ||||||| |||||||||  ||| || | ||    
T  45199023 attcaatcaaagatttgggcgtcaacgttgcagatccggaggccatggatattccggtcactttgattttatcatatatttttgtaggtattatgtcgtt 45198924  T
Q  106 atatattattaacttgggtgttgtgagtttgttc 139  Q
    ||||| ||||||||||| |||||||||| |||||    
T  45198923 atatactattaacttggatgttgtgagtatgttc 45198890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 66 - 139
Target Start/End: Complemental strand, 46822692 - 46822620
Alignment:
Q  66 atttagatttcatcatattttttgtagtcattttgccattatatattattaacttgggtgttgtgagtttgttc 139  Q
    |||||||||| |||||||| ||||||| ||||||| |||| |||  ||||||||||| ||||||||||||||||    
T  46822692 atttagattttatcatattatttgtag-cattttgtcattgtatgctattaacttggatgttgtgagtttgttc 46822620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 30 - 139
Target Start/End: Original strand, 21266499 - 21266610
Alignment:
Q  30 caacgttgcagatccggaagc-atgaatattatggtga-tttagatttcatcatat-tttttgtagtcattttgccattatatattattaacttgggtgt 126  Q
    |||||||||||||||||| || |||||||||  ||||| ||||| ||| ||||||| ||||||||| |||| |||| ||||||  ||||||||||| ||     
T  21266499 caacgttgcagatccggaggccatgaatatttcggtgactttagtttt-atcatatatttttgtaggcattatgccgttatatgctattaacttggatgc 21266597  T
Q  127 tgtgagtttgttc 139  Q
    |||||||||||||    
T  21266598 tgtgagtttgttc 21266610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 72 - 139
Target Start/End: Complemental strand, 32521854 - 32521786
Alignment:
Q  72 atttcatcatat-tttttgtagtcattttgccattatatattattaacttgggtgttgtgagtttgttc 139  Q
    |||| ||||||| ||||||||| |||| |||| |||||| |||||||||||| ||||||||||||||||    
T  32521854 attttatcatatatttttgtaggcattatgccgttatatgttattaacttggatgttgtgagtttgttc 32521786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 20 - 139
Target Start/End: Complemental strand, 30756815 - 30756696
Alignment:
Q  20 atttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattatatattattaact 119  Q
    ||||||||  ||||||||||||||||||||||||| ||||  ||||| |||  ||| |||||||| ||| ||| ||||||| | || |||  | ||||||    
T  30756815 atttggacatcaacgttgcagatccggaagcatgagtatttcggtgacttaagttttatcatattatttataggcattttgtcgttttatgctgttaact 30756716  T
Q  120 tgggtgttgtgagtttgttc 139  Q
    | |||||||| |||| ||||    
T  30756715 taggtgttgtaagttagttc 30756696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 82
Target Start/End: Complemental strand, 38880586 - 38880512
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcata 82  Q
    |||||||| |||||||||  |||||||||||||||| |||||||||  |||| | || |||||||||| ||||||    
T  38880586 attcaatcaatgatttgggtgccaacgttgcagatctggaagcatgcgtattttagttatttagattttatcata 38880512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 17 - 82
Target Start/End: Complemental strand, 5078413 - 5078348
Alignment:
Q  17 atgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcata 82  Q
    |||||||||||| |||| ||||| ||||| |||||||| |||| || |||||||||||| ||||||    
T  5078413 atgatttggacgtcaactttgcatatccgaaagcatgagtattttgatgatttagattttatcata 5078348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 13592498 - 13592366
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatat-tttttgtagtcattttgccatta 106  Q
    |||||||| | ||||||  || |||||||||||||||||| |||||  |||| |||| | ||  |||| ||||||| ||||||||| |||| || | |||    
T  13592498 attcaatcaaagatttgagcgtcaacgttgcagatccggatgcatgggtattctggtcactttaattttatcatatatttttgtaggcattatgtcgtta 13592399  T
Q  107 tatattattaacttgggtgttgtgagtttgttc 139  Q
    |||  ||||||||| | || |||||||||||||    
T  13592398 tatgctattaacttcgatgctgtgagtttgttc 13592366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 35261385 - 35261517
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatat-tttttgtagtcattttgccatta 106  Q
    |||||||| | ||||| |||| ||| |||||||||||||| |||||  ||||  ||| | ||  |||| ||||||| ||||||||| |||| |||| ||     
T  35261385 attcaatcaaagatttagacgtcaatgttgcagatccggaggcatgtgtattccggtcactttaattttatcatatatttttgtaggcattatgccgttg 35261484  T
Q  107 tatattattaacttgggtgttgtgagtttgttc 139  Q
    |||  ||||||||||| | ||||||||||||||    
T  35261485 tatgctattaacttggatattgtgagtttgttc 35261517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 72 - 139
Target Start/End: Original strand, 3861092 - 3861159
Alignment:
Q  72 atttcatcatattttttgtagtcattttgccattatatattattaacttgggtgttgtgagtttgttc 139  Q
    |||| |||||||| | ||||| | |||||||||||||| |||| ||||||| |||| |||||||||||    
T  3861092 attttatcatattatgtgtaggctttttgccattatatgttatcaacttggatgttatgagtttgttc 3861159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 139
Target Start/End: Complemental strand, 28407857 - 28407795
Alignment:
Q  77 atcatattttttgtagtcattttgccattatatattattaacttgggtgttgtgagtttgttc 139  Q
    |||||||| ||||||| ||||||||| || |||  ||||||||||| || |||||||||||||    
T  28407857 atcatattatttgtagacattttgccgttgtatgctattaacttggatgctgtgagtttgttc 28407795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 94 - 139
Target Start/End: Complemental strand, 3223026 - 3222981
Alignment:
Q  94 cattttgccattatatattattaacttgggtgttgtgagtttgttc 139  Q
    ||||||||| || ||| ||||||||||| |||||||||||||||||    
T  3223026 cattttgccgttgtatgttattaacttgtgtgttgtgagtttgttc 3222981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 17222990 - 17222857
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagc-atgaatattatggtgatttagatttcatcatat-tttttgtagtcattttgccatt 105  Q
    |||||||| | |||||||| | |||||||||||||  | | || ||| ||||| |||| | ||  |||| ||||||| ||||||||| |||| |||| ||    
T  17222990 attcaatcaaagatttggatgtcaacgttgcagatttgaaggccatggatattctggtcactttaattttatcatatatttttgtaggcattatgccgtt 17222891  T
Q  106 atatattattaacttgggtgttgtgagtttgttc 139  Q
    ||||  || |||||||| ||||||||||||||||    
T  17222890 atatgctagtaacttggatgttgtgagtttgttc 17222857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 19560085 - 19560218
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccgga-agcatgaatattatggtgatttagatttcatcatat-tttttgtagtcattttgccatt 105  Q
    |||||||| | |||||||||| |||| ||||||||||||| | ||||||||||  ||| | ||  |||| ||||||| ||||||||  |||| |||| ||    
T  19560085 attcaatcaaagatttggacgtcaaccttgcagatccggagaccatgaatattccggtcactttaattttatcatatatttttgtacacattatgccgtt 19560184  T
Q  106 atatattattaacttgggtgttgtgagtttgttc 139  Q
    ||||  ||||||||||  || ||||| |||||||    
T  19560185 atatgctattaacttgattgatgtgaatttgttc 19560218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 121
Target Start/End: Original strand, 24770329 - 24770442
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||| | ||||||||| || |||||||| |||||| ||||||||   |||  || || |||| ||| |||||||| || |||| ||||||||| || |    
T  24770329 attcaaccaatgatttgggcgtcaacgttgaagatccagaagcatgtgaatttcggagacttaggttttatcatattattggtagacattttgccgtttt 24770428  T
Q  108 atattattaacttg 121  Q
    || |||||||||||    
T  24770429 atgttattaacttg 24770442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 42067052 - 42066919
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaag-catgaatattatggtgatttagatttcatcatat-tttttgtagtcattttgccatt 105  Q
    |||||||| | ||||||| || |||||||||||||||||||| ||||||||||  ||| | ||  |||| ||||||| ||||||||| |||   |||  |    
T  42067052 attcaatcaaagatttgggcgtcaacgttgcagatccggaagccatgaatattccggtcactttaattttatcatatatttttgtaggcataacgccgat 42066953  T
Q  106 atatattattaacttgggtgttgtgagtttgttc 139  Q
    || |  ||||||||||| |||||||||| |||||    
T  42066952 atgtgctattaacttggatgttgtgagtatgttc 42066919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 59 - 120
Target Start/End: Complemental strand, 46821708 - 46821647
Alignment:
Q  59 tatggtgatttagatttcatcatattttttgtagtcattttgccattatatattattaactt 120  Q
    |||||||||||| |||| |||||||| |||| ||  |||||| |||||||| ||||||||||    
T  46821708 tatggtgatttatattttatcatattatttgcagatattttgtcattatatgttattaactt 46821647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 17 - 85
Target Start/End: Complemental strand, 969458 - 969390
Alignment:
Q  17 atgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattt 85  Q
    |||||||||||| |||  |||||||| |  |||||||| |||| | ||||||||||||| |||||||||    
T  969458 atgatttggacgtcaatattgcagattcataagcatgagtattctagtgatttagattttatcatattt 969390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 12 - 52
Target Start/End: Original strand, 5792883 - 5792923
Alignment:
Q  12 aatcgatgatttggacgccaacgttgcagatccggaagcat 52  Q
    |||| |||||||||||| |||||||||||||| ||||||||    
T  5792883 aatcaatgatttggacgtcaacgttgcagatctggaagcat 5792923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 72 - 139
Target Start/End: Complemental strand, 7640700 - 7640632
Alignment:
Q  72 atttcatcatat-tttttgtagtcattttgccattatatattattaacttgggtgttgtgagtttgttc 139  Q
    |||||||||||| ||||| ||| |||| || | ||||||  ||||||||||| ||||||||||||||||    
T  7640700 atttcatcatatatttttataggcattatgtcgttatatgctattaacttggatgttgtgagtttgttc 7640632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 35 - 139
Target Start/End: Complemental strand, 26623770 - 26623666
Alignment:
Q  35 ttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattatatattattaacttgggtgttgtgagtt 134  Q
    ||||| |||||||||||||| ||||  ||||  ||| | || ||||||||  || ||| ||||||| | || |||| |||||||||| | ||||||||||    
T  26623770 ttgcaaatccggaagcatgagtatttcggtggcttataatttatcatattagttttaggcattttgtcgttctatactattaacttgagcgttgtgagtt 26623671  T
Q  135 tgttc 139  Q
    |||||    
T  26623670 tgttc 26623666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 30 - 138
Target Start/End: Complemental strand, 43369740 - 43369632
Alignment:
Q  30 caacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattatatattattaacttgggtgttgt 129  Q
    |||||||||||||||||| |||||| |||| | || | ||  |||| |||||||| ||| ||| ||||||||| || |||  ||||||||||  || |||    
T  43369740 caacgttgcagatccggatgcatgagtattctagtcactttaattttatcatattatttataggcattttgccgttgtatgatattaacttgtatgatgt 43369641  T
Q  130 gagtttgtt 138  Q
     ||||||||    
T  43369640 aagtttgtt 43369632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 64; Significance: 8e-28; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 32755 - 32624
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||| | |||||||||||| |||||||||||||| |||||||||| ||||  ||||| |||||||| |||||||| ||||||| ||||||| |  | |    
T  32755 attcaagcaatgatttggacgtcaacgttgcagatctggaagcatgagtatttcggtgacttagattttatcatattatttgtaggcattttgtcgctgt 32656  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    ||| |||||||||| |||||||||||||||||    
T  32655 atactattaacttgagtgttgtgagtttgttc 32624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 59; Significance: 7e-25; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 8 - 138
Target Start/End: Original strand, 6111 - 6241
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||||| |||||||||| | ||| ||||||||||||||||||||  |||| ||||||||||||||| |||||||| ||||||| |||||||   |||     
T  6111 attcaatcaatgatttggatgtcaatgttgcagatccggaagcatgtgtattctggtgatttagattttatcatattatttgtagacattttgttgttac 6210  T
Q  108 atattattaacttgggtgttgtgagtttgtt 138  Q
    |   ||||||||||| |||||||||||||||    
T  6211 aagctattaacttggatgttgtgagtttgtt 6241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0884 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0884
Description:

Target: scaffold0884; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 1981 - 1850
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||| | ||| ||||| || |||||||||||||||| || ||| | ||||  |||||||||| ||| |||||||| ||||||| ||||||||  || |    
T  1981 attcaaccaatggtttgggcgtcaacgttgcagatccgaaaacataagtatttcggtgatttaggttttatcatattatttgtaggcattttgctgttgt 1882  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    || ||||||||||||||||| |||||||||||    
T  1881 atgttattaacttgggtgttatgagtttgttc 1850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 66050 - 65919
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||| | |||||||||  ||||||||||||||||||||||||||  ||||  ||||| |||  ||| |||||||| ||||||| ||||||| | || |    
T  66050 attcaaccaatgatttgggtgccaacgttgcagatccggaagcatgggtatttcggtgacttatgttttatcatattatttgtaggcattttgtcgttgt 65951  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    ||  |||||||||| ||||| |||||||||||    
T  65950 atgctattaacttgagtgttatgagtttgttc 65919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 8 - 138
Target Start/End: Complemental strand, 71308 - 71178
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||||| |||||| ||  | ||||||||||||||||||||||||  |||| || ||| |||||||| || ||||| ||||||| |||||||   || |    
T  71308 attcaatcaatgattggggtgtcaacgttgcagatccggaagcatgggtattttgatgacttagattttattatattatttgtaggcattttgttgttgt 71209  T
Q  108 atattattaacttgggtgttgtgagtttgtt 138  Q
    ||  |||||||||||||||||| ||||||||    
T  71208 atgctattaacttgggtgttgtaagtttgtt 71178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 30 - 139
Target Start/End: Complemental strand, 14856 - 14748
Alignment:
Q  30 caacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattatatattattaacttgggtgttgt 129  Q
    |||| |||||||||||||| ||||| ||||  | ||| |||||||| |||||||| ||||||  |||||||| |||||||  |||||||||||||| |||    
T  14856 caacattgcagatccggaaacatgagtatttcgatgacttagattt-atcatattatttgtatgcattttgctattatatgctattaacttgggtgctgt 14758  T
Q  130 gagtttgttc 139  Q
    ||||||||||    
T  14757 gagtttgttc 14748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 6 - 139
Target Start/End: Complemental strand, 92506 - 92373
Alignment:
Q  6 agattcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccatt 105  Q
    |||||||||| |||||||||||| |||||||| |||||| ||||||||  |||| ||||  |||| |||| |||||||| ||||||| |||||||   ||    
T  92506 agattcaatcaatgatttggacgtcaacgttgtagatccagaagcatgggtattctggtagtttaaattttatcatattgtttgtaggcattttgttgtt 92407  T
Q  106 atatattattaacttgggtgttgtgagtttgttc 139  Q
      ||| |||||||||  ||| |||||||||||||    
T  92406 gcatactattaacttaagtgatgtgagtttgttc 92373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0445 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 20 - 138
Target Start/End: Original strand, 1437 - 1555
Alignment:
Q  20 atttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattatatattattaact 119  Q
    |||||| || ||||||||||| ||  ||||||||   |||  |||||||||| ||| |||||||| ||||||| ||||||||| || |||  ||||||||    
T  1437 atttgggcgtcaacgttgcagttctagaagcatgtgaatttcggtgatttaggttttatcatattatttgtaggcattttgccgttttatgctattaact 1536  T
Q  120 tgggtgttgtgagtttgtt 138  Q
    ||| |||||||||||||||    
T  1537 tggatgttgtgagtttgtt 1555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 32 - 139
Target Start/End: Original strand, 7821 - 7927
Alignment:
Q  32 acgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattatatattattaacttgggtgttgtga 131  Q
    |||||||| |||||||||||||  || | | |||| ||| | || |||||||| |||||||  ||||||| ||| ||| |||||||||||||||||||||    
T  7821 acgttgcatatccggaagcatgg-taatgtagtgagttataatttatcatattatttgtagggattttgctattgtatgttattaacttgggtgttgtga 7919  T
Q  132 gtttgttc 139  Q
    ||||||||    
T  7920 gtttgttc 7927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 99
Target Start/End: Complemental strand, 1827 - 1736
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcatttt 99  Q
    |||||||| ||||||||| | |||||||||||||||||||||||||  ||||  | ||| ||| |||| |||||||| ||||||| ||||||    
T  1827 attcaatcaatgatttgggcaccaacgttgcagatccggaagcatgggtatttcgatgacttatattttatcatattatttgtaggcatttt 1736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 30 - 105
Target Start/End: Original strand, 4275 - 4350
Alignment:
Q  30 caacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccatt 105  Q
    |||||||||||||||| |||| ||| |||| || |||||||||||| |||||||| ||||||| ||||||| ||||    
T  4275 caacgttgcagatccgaaagcttgagtattttgatgatttagattttatcatattatttgtagacattttgtcatt 4350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0495 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0495
Description:

Target: scaffold0495; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 5485 - 5618
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaag-catgaatattatggtgatttagatttcatcatat-tttttgtagtcattttgccatt 105  Q
    |||||||| | |||||||||| |||||||||||||||||| | |||| |||||  ||||| ||  |||| ||||||| ||||||||| |||| |||| ||    
T  5485 attcaatcaaagatttggacgtcaacgttgcagatccggaggccatggatattccggtgactttaattttatcatatatttttgtaggcattatgccgtt 5584  T
Q  106 atatattattaacttgggtgttgtgagtttgttc 139  Q
    ||||  ||||||||||| |  ||| |||||||||    
T  5585 atatgctattaacttggatactgtaagtttgttc 5618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 36906 - 37038
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||||| ||||||||| || ||| |||||  ||| |||||||||  ||||   ||||||||||||| |||||||| |||||||  ||||||   || |    
T  36906 attcaatcaatgatttgggcgtcaatgttgctaatctggaagcatgggtatttcagtgatttagattttatcatattatttgtaggtattttgatgtttt 37005  T
Q  108 atattattaactt-gggtgttgtgagtttgttc 139  Q
    ||  ||||||||| |||||||||||||||||||    
T  37006 atgctattaacttggggtgttgtgagtttgttc 37038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 12 - 100
Target Start/End: Original strand, 93192 - 93280
Alignment:
Q  12 aatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttg 100  Q
    |||| |||||| ||||| ||||||||||||||| |||  |||  |||| |||||||||| |||| |||||||| ||||||| |||||||    
T  93192 aatcaatgattaggacgtcaacgttgcagatccagaaatatgggtattctggtgatttaaattttatcatattgtttgtaggcattttg 93280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 71872 - 71747
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||| | |||||||||| | |||||||| |||||||||||||||  |      |||| |||  ||| |||||||| ||||||| ||||||||| || |    
T  71872 attcaaccaatgatttggatgtcaacgttgtagatccggaagcatgggt------gtgacttaagttttatcatattatttgtaggcattttgccgttgt 71779  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    ||  |||||||||||||| |||||||||||||    
T  71778 atgctattaacttgggtgctgtgagtttgttc 71747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0888 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0888
Description:

Target: scaffold0888; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 1686 - 1555
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||||| |||||||||    |||||| | |||||| ||| ||||  |||| ||||||||||||||| |||||||| ||||||| ||||||  | ||||    
T  1686 attcaatcaatgatttgggtatcaacgtagtagatccagaaacatgggtattctggtgatttagattttatcatattatttgtaggcattttatcgttat 1587  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    ||  |||||| || | || |||||||||||||    
T  1586 atgctattaattttgatgatgtgagtttgttc 1555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 8778 - 8911
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccgga-agcatgaatattatggtgatttagatttcatcatat-tttttgtagtcattttgccatt 105  Q
    |||||||| | ||||||| || |||||||||||||||||| | |||| ||||| |||| | ||  |||| ||||||| ||||||||| |||| |||| ||    
T  8778 attcaatcaaagatttgggcgtcaacgttgcagatccggagaccatggatattctggtcactttaattttatcatatatttttgtaggcattatgccgtt 8877  T
Q  106 atatattattaacttgggtgttgtgagtttgttc 139  Q
    ||||  ||||||||||| |  || ||||||||||    
T  8878 atatgctattaacttggatactgcgagtttgttc 8911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 34 - 139
Target Start/End: Complemental strand, 31256 - 31151
Alignment:
Q  34 gttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattatatattattaacttgggtgttgtgagt 133  Q
    ||||||||||||||||||||  ||||  ||||| |||||||| |||||||| ||| ||| ||||||| | ||   |  ||||| |||||||| |||||||    
T  31256 gttgcagatccggaagcatgggtatttcggtgacttagattttatcatattatttataggcattttgtcgttgcttgctattagcttgggtgctgtgagt 31157  T
Q  134 ttgttc 139  Q
    ||||||    
T  31156 ttgttc 31151  T

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Target: scaffold0634 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 8593 - 8724
Alignment:
Q  8 attcaatcgatgatttggacgccaacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattat 107  Q
    |||||| | ||||||||| || |||||||||||||| ||||| |||  ||||  ||||| |||  ||| ||||||||  | |||| ||||||||| || |    
T  8593 attcaaccaatgatttgggcgtcaacgttgcagatctggaagaatgggtatttcggtgaattatgttttatcatattaatcgtaggcattttgccgttgt 8692  T
Q  108 atattattaacttgggtgttgtgagtttgttc 139  Q
    ||  |||||| ||||||  |||||||||||||    
T  8693 atgctattaagttgggtactgtgagtttgttc 8724  T

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Target: scaffold0157 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 139
Target Start/End: Complemental strand, 27013 - 26952
Alignment:
Q  78 tcatattttttgtagtcattttgccattatatattattaacttgggtgttgtgagtttgttc 139  Q
    ||||||| ||||||| |||||||  |||||||  |||||||||| ||| |||||||||||||    
T  27013 tcatattatttgtagccattttgttattatatgctattaacttgcgtgctgtgagtttgttc 26952  T

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Target: scaffold0136 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 139
Target Start/End: Complemental strand, 10028 - 9919
Alignment:
Q  30 caacgttgcagatccggaagcatgaatattatggtgatttagatttcatcatattttttgtagtcattttgccattatatattattaacttgggtgttgt 129  Q
    ||||||||||||||| ||| ||||  ||||   |||| || | ||| |||||||| ||||||| |||||| || || |||  |||| ||||||||| |||    
T  10028 caacgttgcagatccagaaacatgtgtatttcagtgaattgggttttatcatattatttgtaggcatttttccgttttatgctattgacttgggtgctgt 9929  T
Q  130 gagtttgttc 139  Q
    ||||||||||    
T  9928 gagtttgttc 9919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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