View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3440_high_1 (Length: 538)

Name: NF3440_high_1
Description: NF3440
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3440_high_1
NF3440_high_1
[»] chr8 (47 HSPs)
chr8 (1-229)||(36532828-36533056)
chr8 (324-517)||(36532540-36532733)
chr8 (71-228)||(43192341-43192498)
chr8 (1-228)||(33342368-33342594)
chr8 (113-228)||(11196821-11196936)
chr8 (113-228)||(35580389-35580504)
chr8 (71-224)||(44099929-44100081)
chr8 (76-224)||(19876147-19876295)
chr8 (71-229)||(27747108-27747266)
chr8 (113-226)||(34611737-34611851)
chr8 (71-224)||(2655804-2655959)
chr8 (71-228)||(9072648-9072807)
chr8 (76-224)||(11725617-11725765)
chr8 (71-228)||(28239764-28239922)
chr8 (113-229)||(37565916-37566033)
chr8 (113-224)||(4808899-4809011)
chr8 (71-224)||(9619352-9619507)
chr8 (111-224)||(11464105-11464220)
chr8 (33-228)||(16794224-16794419)
chr8 (31-228)||(33896012-33896211)
chr8 (71-154)||(5333410-5333493)
chr8 (71-149)||(3240366-3240444)
chr8 (31-185)||(29777194-29777348)
chr8 (73-154)||(29617301-29617382)
chr8 (114-166)||(8443579-8443631)
chr8 (118-228)||(44577967-44578078)
chr8 (75-149)||(24099284-24099358)
chr8 (113-228)||(42448064-42448181)
chr8 (70-149)||(10377678-10377754)
chr8 (72-149)||(18734031-18734107)
chr8 (71-149)||(18890724-18890806)
chr8 (112-228)||(32724517-32724642)
chr8 (71-149)||(41896499-41896581)
chr8 (112-224)||(14906959-14907073)
chr8 (86-149)||(39646227-39646290)
chr8 (72-145)||(39657440-39657517)
chr8 (71-149)||(1236722-1236799)
chr8 (71-149)||(1239422-1239499)
chr8 (112-158)||(15046896-15046942)
chr8 (71-149)||(15344295-15344372)
chr8 (71-149)||(15433360-15433437)
chr8 (71-149)||(15524664-15524741)
chr8 (71-145)||(20227306-20227379)
chr8 (180-228)||(17949178-17949226)
chr8 (71-149)||(25191092-25191167)
chr8 (112-221)||(43890160-43890271)
chr8 (71-145)||(45445836-45445907)
[»] chr4 (49 HSPs)
chr4 (21-228)||(10359492-10359699)
chr4 (71-223)||(868105-868256)
chr4 (112-228)||(8009397-8009512)
chr4 (1-228)||(35964900-35965128)
chr4 (72-228)||(51317922-51318078)
chr4 (71-228)||(18138908-18139066)
chr4 (71-228)||(49126121-49126279)
chr4 (72-223)||(3336152-3336304)
chr4 (71-228)||(4643794-4643952)
chr4 (113-228)||(9645586-9645702)
chr4 (72-226)||(2624436-2624589)
chr4 (75-228)||(46991129-46991283)
chr4 (71-228)||(25273816-25273977)
chr4 (113-224)||(43444333-43444445)
chr4 (113-228)||(10389791-10389906)
chr4 (71-225)||(12265394-12265548)
chr4 (113-224)||(35261132-35261243)
chr4 (71-228)||(56194535-56194695)
chr4 (76-228)||(21090089-21090241)
chr4 (1-201)||(27593753-27593952)
chr4 (112-224)||(37188630-37188741)
chr4 (71-224)||(53616645-53616800)
chr4 (112-228)||(1531843-1531961)
chr4 (112-224)||(29965574-29965688)
chr4 (113-228)||(31381709-31381824)
chr4 (113-228)||(34024474-34024589)
chr4 (112-228)||(38706746-38706863)
chr4 (1-147)||(26123280-26123426)
chr4 (71-149)||(36194709-36194791)
chr4 (71-228)||(43154009-43154174)
chr4 (112-224)||(9528913-9529027)
chr4 (75-185)||(36204415-36204526)
chr4 (71-149)||(9643392-9643470)
chr4 (71-157)||(47417670-47417756)
chr4 (71-149)||(51888238-51888316)
chr4 (112-185)||(6972790-6972863)
chr4 (112-149)||(22300853-22300890)
chr4 (100-149)||(47320447-47320496)
chr4 (70-224)||(50766506-50766658)
chr4 (71-149)||(27651944-27652026)
chr4 (70-149)||(22038828-22038907)
chr4 (71-158)||(31359774-31359861)
chr4 (74-149)||(43853446-43853521)
chr4 (70-166)||(32766504-32766597)
chr4 (112-149)||(9145954-9145991)
chr4 (114-167)||(28857388-28857441)
chr4 (75-228)||(32952749-32952899)
chr4 (71-156)||(49410232-49410317)
chr4 (71-123)||(7393301-7393353)
[»] chr2 (43 HSPs)
chr2 (112-228)||(40659968-40660084)
chr2 (71-228)||(3725109-3725266)
chr2 (114-228)||(40626066-40626180)
chr2 (71-228)||(22421664-22421821)
chr2 (71-228)||(26025405-26025562)
chr2 (71-228)||(34598916-34599073)
chr2 (75-224)||(45128136-45128286)
chr2 (112-224)||(4192771-4192883)
chr2 (113-228)||(2808509-2808623)
chr2 (113-229)||(9986379-9986499)
chr2 (113-224)||(32913174-32913285)
chr2 (71-224)||(8805799-8805952)
chr2 (112-224)||(8971663-8971775)
chr2 (31-163)||(20047037-20047169)
chr2 (113-224)||(7015748-7015859)
chr2 (71-228)||(6173560-6173718)
chr2 (113-224)||(30420609-30420722)
chr2 (71-149)||(6358899-6358979)
chr2 (110-167)||(12647987-12648044)
chr2 (72-149)||(29574657-29574734)
chr2 (71-224)||(36233937-36234094)
chr2 (113-224)||(3270266-3270377)
chr2 (71-224)||(27249146-27249300)
chr2 (71-224)||(41430960-41431114)
chr2 (71-147)||(14423321-14423397)
chr2 (73-149)||(28533984-28534060)
chr2 (71-147)||(34128712-34128788)
chr2 (119-226)||(17319254-17319360)
chr2 (177-224)||(27477087-27477134)
chr2 (72-158)||(37614121-37614207)
chr2 (118-224)||(21570449-21570557)
chr2 (113-185)||(4228105-4228177)
chr2 (111-203)||(8308126-8308217)
chr2 (102-166)||(37416687-37416751)
chr2 (112-203)||(25086991-25087082)
chr2 (112-163)||(31580625-31580676)
chr2 (177-228)||(31581821-31581872)
chr2 (71-228)||(459269-459427)
chr2 (71-149)||(17249175-17249252)
chr2 (71-149)||(32448647-32448724)
chr2 (29-149)||(36323866-36323983)
chr2 (122-167)||(18763447-18763492)
chr2 (71-149)||(10237244-10237326)
[»] chr1 (42 HSPs)
chr1 (46-228)||(34519061-34519243)
chr1 (31-228)||(28035067-28035265)
chr1 (28-228)||(51868597-51868798)
chr1 (112-228)||(11453864-11453980)
chr1 (71-226)||(39927549-39927705)
chr1 (31-228)||(9172416-9172616)
chr1 (31-228)||(9180398-9180598)
chr1 (112-228)||(3871337-3871453)
chr1 (117-228)||(51871792-51871903)
chr1 (71-149)||(12635157-12635235)
chr1 (114-224)||(14545452-14545562)
chr1 (113-227)||(27872668-27872782)
chr1 (1-221)||(39987325-39987545)
chr1 (112-224)||(50272176-50272289)
chr1 (112-228)||(40881048-40881166)
chr1 (71-228)||(9919317-9919475)
chr1 (113-226)||(33291455-33291569)
chr1 (71-149)||(34528717-34528795)
chr1 (31-226)||(7342652-7342848)
chr1 (113-221)||(19723268-19723377)
chr1 (71-163)||(9687199-9687291)
chr1 (71-226)||(50166094-50166250)
chr1 (129-228)||(30818399-30818498)
chr1 (71-228)||(25406279-25406437)
chr1 (113-224)||(35584655-35584770)
chr1 (71-228)||(38520526-38520686)
chr1 (71-229)||(44637349-44637507)
chr1 (112-228)||(45426102-45426215)
chr1 (75-228)||(5324557-5324710)
chr1 (112-224)||(5701189-5701304)
chr1 (112-224)||(7997719-7997834)
chr1 (71-149)||(16161821-16161903)
chr1 (71-149)||(41994414-41994492)
chr1 (71-149)||(49626901-49626978)
chr1 (112-224)||(20266234-20266347)
chr1 (112-149)||(34413162-34413199)
chr1 (112-217)||(31836745-31836852)
chr1 (71-149)||(47132890-47132968)
chr1 (112-149)||(48750168-48750205)
chr1 (71-149)||(3228259-3228334)
chr1 (113-149)||(19060897-19060933)
chr1 (71-171)||(33817176-33817275)
[»] chr6 (35 HSPs)
chr6 (71-228)||(23947313-23947470)
chr6 (112-225)||(12165768-12165881)
chr6 (76-203)||(34489200-34489327)
chr6 (112-228)||(8196443-8196560)
chr6 (28-228)||(12652864-12653069)
chr6 (71-224)||(25064163-25064318)
chr6 (31-228)||(35001514-35001712)
chr6 (113-224)||(7881139-7881252)
chr6 (112-228)||(8028154-8028271)
chr6 (112-224)||(17237321-17237433)
chr6 (113-228)||(4468483-4468598)
chr6 (71-154)||(30493512-30493595)
chr6 (112-229)||(4088383-4088501)
chr6 (113-224)||(7876081-7876194)
chr6 (31-228)||(16419082-16419280)
chr6 (71-223)||(25337499-25337652)
chr6 (31-228)||(10228603-10228801)
chr6 (71-224)||(8496893-8497049)
chr6 (75-149)||(22571459-22571533)
chr6 (71-149)||(8102707-8102789)
chr6 (113-228)||(33740615-33740731)
chr6 (32-163)||(4984523-4984654)
chr6 (71-137)||(26588499-26588565)
chr6 (113-155)||(33543657-33543699)
chr6 (72-147)||(28635117-28635192)
chr6 (70-166)||(68027-68120)
chr6 (71-146)||(546014-546093)
chr6 (70-166)||(606175-606268)
chr6 (113-171)||(8266624-8266682)
chr6 (113-163)||(17334768-17334818)
chr6 (71-148)||(17346555-17346632)
chr6 (72-149)||(28981162-28981239)
chr6 (113-149)||(14801808-14801844)
chr6 (113-149)||(30776653-30776689)
chr6 (75-171)||(32191759-32191855)
[»] chr7 (46 HSPs)
chr7 (71-228)||(1448825-1448982)
chr7 (31-228)||(1485212-1485409)
chr7 (71-228)||(31235787-31235945)
chr7 (71-228)||(35667227-35667384)
chr7 (31-228)||(22927825-22928023)
chr7 (71-221)||(23786508-23786657)
chr7 (112-229)||(26583637-26583755)
chr7 (76-229)||(42067061-42067214)
chr7 (71-228)||(14627874-14628032)
chr7 (71-228)||(32521922-32522079)
chr7 (112-224)||(48207830-48207942)
chr7 (71-226)||(20116509-20116664)
chr7 (31-144)||(19560007-19560120)
chr7 (112-228)||(26492289-26492406)
chr7 (112-228)||(35496211-35496328)
chr7 (112-224)||(23425408-23425520)
chr7 (71-225)||(6001948-6002103)
chr7 (28-226)||(23085447-23085646)
chr7 (112-224)||(46821942-46822056)
chr7 (70-166)||(9450163-9450256)
chr7 (113-203)||(17223036-17223126)
chr7 (71-149)||(24350864-24350946)
chr7 (105-149)||(22742926-22742970)
chr7 (71-149)||(28476209-28476291)
chr7 (71-228)||(433686-433845)
chr7 (113-203)||(17611075-17611165)
chr7 (71-149)||(41553461-41553539)
chr7 (71-149)||(41553806-41553884)
chr7 (113-224)||(46338981-46339094)
chr7 (71-149)||(26623817-26623892)
chr7 (113-228)||(42311204-42311320)
chr7 (113-224)||(42408290-42408402)
chr7 (112-224)||(45199068-45199180)
chr7 (112-183)||(3394426-3394497)
chr7 (112-147)||(32684674-32684709)
chr7 (75-185)||(969478-969588)
chr7 (70-166)||(19296842-19296935)
chr7 (75-149)||(41554155-41554229)
chr7 (71-145)||(44311819-44311892)
chr7 (75-149)||(46244268-46244342)
chr7 (112-149)||(1749219-1749256)
chr7 (112-149)||(35132929-35132966)
chr7 (143-228)||(36143790-36143875)
chr7 (112-149)||(48930755-48930792)
chr7 (71-149)||(39328817-39328892)
chr7 (71-135)||(46818411-46818475)
[»] chr3 (43 HSPs)
chr3 (31-228)||(46934564-46934761)
chr3 (71-228)||(49552219-49552376)
chr3 (71-228)||(25162358-25162515)
chr3 (113-224)||(29503388-29503499)
chr3 (75-149)||(12947305-12947379)
chr3 (114-228)||(2342413-2342528)
chr3 (31-158)||(3848874-3849001)
chr3 (112-228)||(25631562-25631680)
chr3 (112-228)||(4172488-4172605)
chr3 (1-158)||(31794063-31794220)
chr3 (1-163)||(21488078-21488243)
chr3 (112-224)||(32607393-32607507)
chr3 (113-228)||(39917434-39917549)
chr3 (115-228)||(17237724-17237840)
chr3 (71-228)||(22802943-22803101)
chr3 (71-149)||(29239326-29239404)
chr3 (71-224)||(36906047-36906201)
chr3 (112-228)||(4178486-4178603)
chr3 (105-149)||(16235405-16235449)
chr3 (71-202)||(30648714-30648846)
chr3 (71-163)||(35499193-35499285)
chr3 (71-149)||(51487089-51487171)
chr3 (72-151)||(26739385-26739464)
chr3 (70-171)||(52923143-52923241)
chr3 (19-149)||(36734635-36734765)
chr3 (113-163)||(42719504-42719554)
chr3 (71-185)||(51202249-51202363)
chr3 (112-149)||(7546593-7546630)
chr3 (118-228)||(38855078-38855190)
chr3 (71-149)||(27706253-27706335)
chr3 (177-228)||(38440679-38440730)
chr3 (112-224)||(44907435-44907548)
chr3 (71-149)||(3606759-3606837)
chr3 (71-149)||(7805511-7805589)
chr3 (70-166)||(9998436-9998529)
chr3 (71-149)||(41818195-41818272)
chr3 (176-228)||(37169152-37169205)
chr3 (70-166)||(40487294-40487388)
chr3 (112-149)||(42460729-42460766)
chr3 (182-222)||(1649324-1649364)
chr3 (113-149)||(8914691-8914727)
chr3 (190-222)||(35865086-35865118)
chr3 (122-166)||(43488665-43488709)
[»] chr5 (39 HSPs)
chr5 (31-228)||(19280900-19281097)
chr5 (31-228)||(7150290-7150488)
chr5 (76-224)||(30298139-30298287)
chr5 (72-224)||(36344487-36344638)
chr5 (112-228)||(42886406-42886521)
chr5 (113-228)||(16981217-16981332)
chr5 (71-226)||(28235514-28235669)
chr5 (110-229)||(35475371-35475490)
chr5 (75-229)||(43261818-43261971)
chr5 (71-228)||(7613053-7613209)
chr5 (71-228)||(27266854-27267013)
chr5 (32-224)||(30371655-30371849)
chr5 (71-224)||(2057833-2057987)
chr5 (71-228)||(43148657-43148815)
chr5 (112-224)||(21060318-21060430)
chr5 (122-228)||(7246885-7246992)
chr5 (113-228)||(18677502-18677619)
chr5 (114-228)||(19259849-19259966)
chr5 (71-185)||(34881688-34881802)
chr5 (71-185)||(41184435-41184549)
chr5 (71-149)||(14211206-14211288)
chr5 (122-228)||(7241709-7241816)
chr5 (72-149)||(28540934-28541015)
chr5 (76-158)||(15570907-15570988)
chr5 (71-218)||(13421850-13421994)
chr5 (112-224)||(781320-781432)
chr5 (113-185)||(42579858-42579930)
chr5 (70-167)||(6012164-6012258)
chr5 (113-228)||(7886975-7887090)
chr5 (113-147)||(10649652-10649686)
chr5 (88-158)||(19983367-19983437)
chr5 (112-154)||(31802507-31802549)
chr5 (70-166)||(38597766-38597859)
chr5 (107-149)||(39567281-39567323)
chr5 (72-149)||(10332576-10332653)
chr5 (112-149)||(19103539-19103576)
chr5 (112-149)||(19349680-19349717)
chr5 (113-185)||(3271439-3271511)
chr5 (180-228)||(20257799-20257847)
[»] scaffold0014 (2 HSPs)
scaffold0014 (76-224)||(201372-201520)
scaffold0014 (1-45)||(21822-21866)
[»] scaffold0113 (1 HSPs)
scaffold0113 (72-149)||(36683-36760)
[»] scaffold0347 (1 HSPs)
scaffold0347 (75-149)||(6014-6088)
[»] scaffold0495 (1 HSPs)
scaffold0495 (31-228)||(5322-5520)
[»] scaffold0146 (1 HSPs)
scaffold0146 (115-228)||(16359-16475)
[»] scaffold0003 (1 HSPs)
scaffold0003 (112-228)||(361835-361949)
[»] scaffold0311 (1 HSPs)
scaffold0311 (141-229)||(8643-8731)
[»] scaffold0426 (1 HSPs)
scaffold0426 (71-158)||(6300-6387)
[»] scaffold0042 (1 HSPs)
scaffold0042 (71-158)||(92523-92610)
[»] scaffold0888 (1 HSPs)
scaffold0888 (71-147)||(1705-1785)
[»] scaffold0264 (1 HSPs)
scaffold0264 (113-163)||(20433-20483)
[»] scaffold0002 (1 HSPs)
scaffold0002 (113-149)||(453936-453972)


Alignment Details
Target: chr8 (Bit Score: 197; Significance: 1e-107; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 36533056 - 36532828
Alignment:
Q  1 attaaagtgacatgaatgctcatgccaccagatctgcaatgttgatgtccaagtcgtttactgaatagaagatctttcaataggaaccaaataaacacca 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  36533056 attaaagtgacatgaatgcccatgccaccagatctgcaatgttgatgtccaagtcgtttacttaatagaagatctttcaataggaaccaaataaacacca 36532957  T
Q  101 aaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaaacctcgaagaaaaaatctagatatatgtga 200  Q
    |||||||||||||||||||||||| |||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  36532956 aaacaaaatgagaaatcaaacaacaccgcacaagacgacgaacaacacaacaccacacctagacgataaaacctcgaagaaaaaacctaaatatatgtga 36532857  T
Q  201 aaactccttatttagattgaaatagagat 229  Q
    |||||||||||||| ||||||||||||||    
T  36532856 aaactccttatttaaattgaaatagagat 36532828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 182; E-Value: 4e-98
Query Start/End: Original strand, 324 - 517
Target Start/End: Complemental strand, 36532733 - 36532540
Alignment:
Q  324 ctatagtcggcttgttcgataactttactctttttagatgatatgaagtgagtcatcattctattgacattatttgaagttagtttggtgcctaaaacac 423  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36532733 ctatagtcggcttgttcgataactttactctttttagatgatatgaagtgagtcatcattctattgacattatttgaagttagtttggtgcctaaaacac 36532634  T
Q  424 atacaactaatgacgtgttgcatgagttgccaaatgattaggtatgcataaaccaacaataatttcaaattaaaagtaagatgaatatgtcggt 517  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||| |||||||||||||||||||||||||||    
T  36532633 atacaactaatgacgtgttgcatgagttgccaaatgattaggtatacacaaaccaacaataatttctaattaaaagtaagatgaatatgtcggt 36532540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 71 - 228
Target Start/End: Original strand, 43192341 - 43192498
Alignment:
Q  71 gatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaa 170  Q
    |||||||||| | ||| ||||| ||||||| || || | |  ||||||||||||||||||||||||| ||||||||| | |||||||| |||| ||| ||    
T  43192341 gatctttcaaaatgaatcaaatgaacaccacaagaagacggaaaatcaaacaacgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaa 43192440  T
Q  171 acctcgaagaaaaaatctagatatatgtgaaaactccttatttagattgaaatagaga 228  Q
    | | ||||||||||| |||||| ||||| |||||  ||||||||||||||||||||||    
T  43192441 atcacgaagaaaaaacctagatctatgtaaaaaccacttatttagattgaaatagaga 43192498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 33342594 - 33342368
Alignment:
Q  1 attaaagtgacatgaatgctcatgccaccagatctgcaatgttgatgtccaagtcgtttactgaatagaagatctttcaataggaaccaaataaacacca 100  Q
    ||||||||||| ||||| |||||||| |||||||||||| | ||| |||||| || || | ||||||   |||| ||||||| ||| ||||||||||||     
T  33342594 attaaagtgacctgaatactcatgcctccagatctgcaacg-tgacgtccaattctttgattgaataattgatc-ttcaatatgaatcaaataaacaccg 33342497  T
Q  101 aaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaaacctcgaagaaaaaatctagatatatgtga 200  Q
     ||||| | | ||||||||| ||||||||| ||||||  |||||||||| |||||||| | |  ||  ||| | ||||||||||| |||||| |||||||    
T  33342496 caacaatacgggaaatcaaaaaacgccgcataagacgaagaacaacacaccaccacacttgggtgacgaaatcacgaagaaaaaacctagatctatgtga 33342397  T
Q  201 aaactc-cttatttagattgaaatagaga 228  Q
    ||| || ||||||||||||||| ||||||    
T  33342396 aaaatcacttatttagattgaattagaga 33342368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 113 - 228
Target Start/End: Complemental strand, 11196936 - 11196821
Alignment:
Q  113 aaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaaacctcgaagaaaaaatctagatatatgtgaaaactccttatt 212  Q
    ||||||||||||||||||||||||| ||||||||| | |||||||| |||| ||| ||| |   ||||||||| |||||| ||||||||||   ||||||    
T  11196936 aaatcaaacaacgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcaaaaagaaaaaacctagatctatgtgaaaatcacttatt 11196837  T
Q  213 tagattgaaatagaga 228  Q
    ||||||||||||||||    
T  11196836 tagattgaaatagaga 11196821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 113 - 228
Target Start/End: Complemental strand, 35580504 - 35580389
Alignment:
Q  113 aaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaaacctcgaagaaaaaatctagatatatgtgaaaactccttatt 212  Q
    ||||||||||||| ||||||||||| ||||||||| | |||||||| |||| ||| ||| | ||||||||||| |||||| ||||||||||   ||||||    
T  35580504 aaatcaaacaacgtcgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacgaagaaaaaacctagatctatgtgaaaatcacttatt 35580405  T
Q  213 tagattgaaatagaga 228  Q
    || |||||||||||||    
T  35580404 taaattgaaatagaga 35580389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 71 - 224
Target Start/End: Original strand, 44099929 - 44100081
Alignment:
Q  71 gatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaa 170  Q
    |||||||||||| ||| ||||| ||||||  || || | | |||||||||||||||||||||||||| ||||||||| | |||||||| |||| ||| ||    
T  44099929 gatctttcaatatgaatcaaatgaacaccgcaaaaagacgggaaatcaaacaacgccgcacaagacgacgaacaacaaaccaccacacttagatgat-aa 44100027  T
Q  171 acctcgaagaaaaaatctagatatatgtgaaaactccttatttagattgaaata 224  Q
    | | | |||||||||  ||||| ||||||||||   ||||||||||||||||||    
T  44100028 atcacaaagaaaaaacttagatctatgtgaaaataacttatttagattgaaata 44100081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 76 - 224
Target Start/End: Complemental strand, 19876295 - 19876147
Alignment:
Q  76 ttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaaacctc 175  Q
    ||||||| ||| ||||| ||||||| || || | | | |||||||||||||||||||||||| ||||||||| | ||| |||| |||| ||| ||| | |    
T  19876295 ttcaatatgaatcaaatgaacaccacaagaagacggggaatcaaacaacgccgcacaagacgacgaacaacaaaccactacacttagatgatgaaatcac 19876196  T
Q  176 gaagaaaaaatctagatatatgtgaaaactccttatttagattgaaata 224  Q
     ||||||||| || ||| ||||||||||   ||||||||||||||||||    
T  19876195 aaagaaaaaaccttgatctatgtgaaaatcacttatttagattgaaata 19876147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 71 - 229
Target Start/End: Original strand, 27747108 - 27747266
Alignment:
Q  71 gatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaa 170  Q
    |||||||||||| ||| ||||| ||||||  |||||||   |||||||||||  | ||||||||| | ||||||||||| ||||||||| ||| | | ||    
T  27747108 gatctttcaatatgaatcaaatgaacaccgcaacaaaacaggaaatcaaacactgtcgcacaagatgacgaacaacacaccaccacacccagatggtgaa 27747207  T
Q  171 acctcgaagaaaaaatctagatatatgtgaaaactccttatttagattgaaatagagat 229  Q
    | | |||||||||||  || || |||||||||| | |||||||| |||||||| |||||    
T  27747208 atcacgaagaaaaaacttatatttatgtgaaaattacttatttaaattgaaatggagat 27747266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 113 - 226
Target Start/End: Complemental strand, 34611851 - 34611737
Alignment:
Q  113 aaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaaacctcgaag-aaaaaatctagatatatgtgaaaactccttat 211  Q
    ||||||||||||||||||||||||| ||||||||| | |||||||| |||| ||| ||| | | ||| |||||| |||||| ||||||||||   |||||    
T  34611851 aaatcaaacaacgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaaaaaaacctagatttatgtgaaaatcacttat 34611752  T
Q  212 ttagattgaaataga 226  Q
    ||||| |||||||||    
T  34611751 ttagactgaaataga 34611737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 71 - 224
Target Start/End: Complemental strand, 2655959 - 2655804
Alignment:
Q  71 gatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaa 170  Q
    |||||||||||| ||| ||||| ||||||  |  || | | ||||||||||||||| |||||||||| ||||||||| | |||||||| |||| ||| ||    
T  2655959 gatctttcaatatgaatcaaatgaacaccgcacgaagacgggaaatcaaacaacgctgcacaagacgacgaacaacaaatcaccacacttagatgatgaa 2655860  T
Q  171 acctcgaag--aaaaaatctagatatatgtgaaaactccttatttagattgaaata 224  Q
    |   | |||  ||||||||||||| ||||||||||   ||||||||||||||||||    
T  2655859 attacaaagaaaaaaaatctagatctatgtgaaaatcacttatttagattgaaata 2655804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 71 - 228
Target Start/End: Complemental strand, 9072807 - 9072648
Alignment:
Q  71 gatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaa 170  Q
    ||||||||||||||||  |||| ||||||  || || ||| |||| ||||||||||||||||||| |  |||||||| | |||||||| |||| ||| ||    
T  9072807 gatctttcaataggaataaaatgaacaccgcaagaagatgggaaagcaaacaacgccgcacaagatgaagaacaacaaaccaccacacttagatgatgaa 9072708  T
Q  171 acctcgaag--aaaaaatctagatatatgtgaaaactccttatttagattgaaatagaga 228  Q
    | | | |||  ||||||||||||| |||||||||    |||||||| |||||||||||||    
T  9072707 atcacaaagaaaaaaaatctagatttatgtgaaagtcacttatttaaattgaaatagaga 9072648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 76 - 224
Target Start/End: Complemental strand, 11725765 - 11725617
Alignment:
Q  76 ttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaaacctc 175  Q
    ||||||| ||| || || ||||||  || |||||| |||||||||||| | |||||||||||  |||||||| | |||||||| |||| ||| ||| |      
T  11725765 ttcaatatgaatcagatgaacaccgcaagaaaatgggaaatcaaacaatgtcgcacaagacgatgaacaacaaaccaccacacttagatgatgaaatcaa 11725666  T
Q  176 gaagaaaaaatctagatatatgtgaaaactccttatttagattgaaata 224  Q
     ||||||||| |||||| ||||||||||   ||||||||||||||||||    
T  11725665 aaagaaaaaacctagatctatgtgaaaaacacttatttagattgaaata 11725617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 71 - 228
Target Start/End: Complemental strand, 28239922 - 28239764
Alignment:
Q  71 gatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaa 170  Q
    ||||||||||||  || ||||| ||||||  ||||| | ||| |||||||||||||||||||||||| ||||||||| | | ||||||  | | ||  ||    
T  28239922 gatctttcaatattaatcaaatgaacaccgcaacaatacgaggaatcaaacaacgccgcacaagacgacgaacaacaaaccgccacactcaaatgacgaa 28239823  T
Q  171 acctcgaagaaaaaatctagatatatgtgaaaactc-cttatttagattgaaatagaga 228  Q
    | | || ||| |||| |||||| ||||||||||  | ||||||||||||||||||||||    
T  28239822 atcgcgtagagaaaacctagatctatgtgaaaaaacacttatttagattgaaatagaga 28239764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 113 - 229
Target Start/End: Original strand, 37565916 - 37566033
Alignment:
Q  113 aaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaaacctcgaag-aaaaaatctagatatatgtgaaaactccttat 211  Q
    ||||||||||| ||||||||||||| |||| |||| | |||||||| |||| ||| ||| ||| ||| |||||| ||| || ||||||||||    ||||    
T  37565916 aaatcaaacaatgccgcacaagacgacgaataacaaaccaccacacttagatgatgaaatctcaaagaaaaaaacctaaatctatgtgaaaatcaattat 37566015  T
Q  212 ttagattgaaatagagat 229  Q
    ||||||||||||||||||    
T  37566016 ttagattgaaatagagat 37566033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 113 - 224
Target Start/End: Complemental strand, 4809011 - 4808899
Alignment:
Q  113 aaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaaacctcgaag-aaaaaatctagatatatgtgaaaactccttat 211  Q
    ||||||||||||||||||||||||| ||||||||| | |||||||| |||| ||| |||   | ||| |||||| |||||| ||||||||||   |||||    
T  4809011 aaatcaaacaacgccgcacaagacgacgaacaacaaatcaccacacttagatgatgaaattacaaagaaaaaaagctagatctatgtgaaaatcacttat 4808912  T
Q  212 ttagattgaaata 224  Q
    ||| |||||||||    
T  4808911 ttacattgaaata 4808899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 71 - 224
Target Start/End: Original strand, 9619352 - 9619507
Alignment:
Q  71 gatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaa 170  Q
    |||||||||||| ||| ||||| ||||||  |  || | | |||||||||||||||||||||||||| ||||||||| | |||||||| |||| ||| ||    
T  9619352 gatctttcaatatgaatcaaatgaacaccgcacgaagacgggaaatcaaacaacgccgcacaagacgacgaacaacaaatcaccacacgtagatgatgaa 9619451  T
Q  171 acctcga--agaaaaaatctagatatatgtgaaaactccttatttagattgaaata 224  Q
    |   | |  | |||||||||| || ||||||||||   ||||||||||||||||||    
T  9619452 attacaatgaaaaaaaatctaaatctatgtgaaaatcacttatttagattgaaata 9619507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 111 - 224
Target Start/End: Complemental strand, 11464220 - 11464105
Alignment:
Q  111 agaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaaacctcgaag--aaaaaatctagatatatgtgaaaactcct 208  Q
    ||||||||||||||||||||||||||| ||||||||| | |||||||| |||| ||| |||   | |||  ||||||||||||| ||||||||||   ||    
T  11464220 agaaatcaaacaacgccgcacaagacgacgaacaacaaatcaccacacttagatgatgaaattacaaagaaaaaaaatctagatctatgtgaaaatcact 11464121  T
Q  209 tatttagattgaaata 224  Q
    |||| | |||||||||    
T  11464120 tattcaaattgaaata 11464105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 33 - 228
Target Start/End: Complemental strand, 16794419 - 16794224
Alignment:
Q  33 tctgcaatgttgatgtccaagtcgtttactgaatagaagatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcaca 132  Q
    ||||||| |||||||| ||| || || | ||||||   |||||||||||| ||| ||||| ||||||  ||||| | | |||||||||| |||  |||||    
T  16794419 tctgcaacgttgatgttcaattctttgattgaataattgatctttcaatatgaatcaaatgaacaccgtaacaatacgggaaatcaaacgacgttgcaca 16794320  T
Q  133 agacgccgaacaacacagcaccacacctagacgataaaacctcgaagaaaaaatctagatatatgtgaaaactc-cttatttagattgaaatagaga 228  Q
    ||||| ||||||||| | |||||| |   || ||| ||| | ||||| ||||| |||||| |||||||||| || ||||||||||||||| ||||||    
T  16794319 agacgacgaacaacataacaccactctcggatgatgaaatcacgaag-aaaaacctagatttatgtgaaaaatcacttatttagattgaattagaga 16794224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 31 - 228
Target Start/End: Complemental strand, 33896211 - 33896012
Alignment:
Q  31 gatctgcaatgttgatgtccaagtcgtttactgaatagaagatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgca 130  Q
    ||||||||| ||||| |||||| || || | ||||||   ||||||||||| ||||  |||| ||||||  || || | | |||| ||||||||||||||    
T  33896211 gatctgcaacgttgacgtccaaatctttgattgaataatcgatctttcaattggaataaaatgaacaccgcaagaagacgggaaaacaaacaacgccgca 33896112  T
Q  131 caagacgccgaacaacacagcaccacacctagacgataaaacctcgaag--aaaaaatctagatatatgtgaaaactccttatttagattgaaatagaga 228  Q
    ||||| | ||||||||| | |||||||| |||| ||| ||| | | |||  |||||| |||||| |||||||||    |||||||||||| |||||||||    
T  33896111 caagaagacgaacaacaaaccaccacacttagatgatgaaatcacaaagaaaaaaaacctagatctatgtgaaagtcacttatttagatttaaatagaga 33896012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 71 - 154
Target Start/End: Complemental strand, 5333493 - 5333410
Alignment:
Q  71 gatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacacagcacc 154  Q
    |||||||||||||||||||||  ||||||  ||||| | |  |||||||||||| |||||||||||| ||||||||||| ||||    
T  5333493 gatctttcaataggaaccaaacgaacaccggaacaagacgcaaaatcaaacaacaccgcacaagacgacgaacaacacaacacc 5333410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 71 - 149
Target Start/End: Complemental strand, 3240444 - 3240366
Alignment:
Q  71 gatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacaca 149  Q
    ||||||||||||  ||||||| |||||||| ||||| | | |||||||||||||| || |||||||| |||||||||||    
T  3240444 gatctttcaatattaaccaaacaaacaccacaacaacacgcgaaatcaaacaacgtcgtacaagacgacgaacaacaca 3240366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 31 - 185
Target Start/End: Complemental strand, 29777348 - 29777194
Alignment:
Q  31 gatctgcaatgttgatgtccaagtcgtttactgaatagaagatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgca 130  Q
    ||||||||||||||| |||||| || || | ||||||   ||||||||||||||||  |||| ||||||  || || | | |||| ||||||| | ||||    
T  29777348 gatctgcaatgttgacgtccaaatctttgattgaataatcgatctttcaataggaataaaatgaacaccgcaagaagacgggaaagcaaacaatgtcgca 29777249  T
Q  131 caagacgccgaacaacacagcaccacacctagacgataaaacctcgaagaaaaaa 185  Q
    ||||||| ||||||||| | |||||||| |||| ||| ||| | | |||||||||    
T  29777248 caagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaaaaaa 29777194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 73 - 154
Target Start/End: Original strand, 29617301 - 29617382
Alignment:
Q  73 tctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacacagcacc 154  Q
    |||||||||| ||||||||  ||||||  ||||| | | ||||||||||| |||||||||||||| ||||||||||| ||||    
T  29617301 tctttcaataagaaccaaacgaacaccgcaacaagacgcgaaatcaaacagcgccgcacaagacgacgaacaacacaacacc 29617382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 114 - 166
Target Start/End: Original strand, 8443579 - 8443631
Alignment:
Q  114 aatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacga 166  Q
    |||||||||||||||||||||||| ||||||||||| |||| ||| |||||||    
T  8443579 aatcaaacaacgccgcacaagacgacgaacaacacaacaccgcacttagacga 8443631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 118 - 228
Target Start/End: Complemental strand, 44578078 - 44577967
Alignment:
Q  118 aaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaaacctcgaag-aaaaaatctagatatatgtgaaaactccttatttaga 216  Q
    |||||||||||||||||||| ||||||||| | |||||||| |||| ||| |||   | ||| |||||| |||||| |||||| |||   |||| |||||    
T  44578078 aaacaacgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaattacaaagaaaaaaacctagatctatgtgtaaatcacttagttaga 44577979  T
Q  217 ttgaaatagaga 228  Q
    ||||||||||||    
T  44577978 ttgaaatagaga 44577967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 75 - 149
Target Start/End: Original strand, 24099284 - 24099358
Alignment:
Q  75 tttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacaca 149  Q
    |||||||| ||||||||| ||||||  ||||| ||| ||||||||||||||| | ||| |||| |||||||||||    
T  24099284 tttcaatatgaaccaaatgaacaccgcaacaagatgcgaaatcaaacaacgcggtacaggacgacgaacaacaca 24099358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 113 - 228
Target Start/End: Original strand, 42448064 - 42448181
Alignment:
Q  113 aaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaaacctcgaagaa--aaaatctagatatatgtgaaaactcctta 210  Q
    ||||||||||| ||||||||||||| ||||||||| | | |||||| |||| ||| ||| | | |||||  |||| |||||| ||| || |||   ||||    
T  42448064 aaatcaaacaatgccgcacaagacgacgaacaacaaacctccacacttagatgatgaaatcacaaagaaacaaaacctagatctatatgtaaatcactta 42448163  T
Q  211 tttagattgaaatagaga 228  Q
    ||||||||||||||||||    
T  42448164 tttagattgaaatagaga 42448181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 70 - 149
Target Start/End: Complemental strand, 10377754 - 10377678
Alignment:
Q  70 agatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacaca 149  Q
    ||||||||||||||||||  || ||||||||  |||||| | ||||||||||   ||||||||||||| |||||||||||    
T  10377754 agatctttcaataggaactgaacaaacaccacgacaaaacgcgaaatcaaac---gccgcacaagacggcgaacaacaca 10377678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 72 - 149
Target Start/End: Complemental strand, 18734107 - 18734031
Alignment:
Q  72 atctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacaca 149  Q
    |||||||||||  || ||||||||||||| ||||| | ||||||| || || |||||||||||||| |||||||||||    
T  18734107 atctttcaatataaaacaaataaacaccacaacaagaagagaaattaa-catcgccgcacaagacggcgaacaacaca 18734031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 71 - 149
Target Start/End: Original strand, 18890724 - 18890806
Alignment:
Q  71 gatctttcaataggaaccaaataaacaccaaa----acaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacaca 149  Q
    |||||||||||| ||||||||  ||||||| |    | |||||| |||||||||||||| ||||||||||| |||||||||||    
T  18890724 gatctttcaatacgaaccaaacgaacaccacacaacaaaaaatgcgaaatcaaacaacgtcgcacaagacgacgaacaacaca 18890806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 112 - 228
Target Start/End: Original strand, 32724517 - 32724642
Alignment:
Q  112 gaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaaacctcgaagaaaa---------aatctagatatatgtgaaa 202  Q
    |||||||||||||||||||||||||| ||||||||| | |||||||  |||| ||| ||| |   |||||||         ||||||||| |||||||||    
T  32724517 gaaatcaaacaacgccgcacaagacgacgaacaacaaaccaccacagttagatgatgaaatcataaagaaaaaacaaaaaaaatctagatctatgtgaaa 32724616  T
Q  203 actccttatttagattgaaatagaga 228  Q
    |   ||||||||||||||||||||||    
T  32724617 atcacttatttagattgaaatagaga 32724642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 71 - 149
Target Start/End: Complemental strand, 41896581 - 41896499
Alignment:
Q  71 gatctttcaataggaaccaaataaacacc--aaaacaaaat--gagaaatcaaacaacgccgcacaagacgccgaacaacaca 149  Q
    |||||||||||| ||||||||  ||||||  | ||||||||  | |||||||||||||||||||||||||| | |||||||||    
T  41896581 gatctttcaatacgaaccaaacgaacaccgcacaacaaaatatgtgaaatcaaacaacgccgcacaagacgaccaacaacaca 41896499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 112 - 224
Target Start/End: Original strand, 14906959 - 14907073
Alignment:
Q  112 gaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaaacctcgaagaaaa--aatctagatatatgtgaaaactcctt 209  Q
    |||||||||||||||||||||||||| | ||||||| | |||||||  | || ||| |||   | |||||||  || |||||| ||||||||||   |||    
T  14906959 gaaatcaaacaacgccgcacaagacgacaaacaacaaatcaccacattttgatgatgaaattacaaagaaaaagaacctagatctatgtgaaaatcactt 14907058  T
Q  210 atttagattgaaata 224  Q
    |||||||||||||||    
T  14907059 atttagattgaaata 14907073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 149
Target Start/End: Original strand, 39646227 - 39646290
Alignment:
Q  86 accaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacaca 149  Q
    |||||| |||||| | |||||| ||  ||||||||||||||||||||||||  |||||||||||    
T  39646227 accaaacaaacactacaacaaattgcaaaatcaaacaacgccgcacaagaccgcgaacaacaca 39646290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 72 - 145
Target Start/End: Complemental strand, 39657517 - 39657440
Alignment:
Q  72 atctttcaataggaaccaaataaacacc--aaaacaaaa--tgagaaatcaaacaacgccgcacaagacgccgaacaa 145  Q
    ||||||||||| ||||||||  ||||||  | |||||||  || |||||||||||||||||||||||||| |||||||    
T  39657517 atctttcaatacgaaccaaacgaacaccgcacaacaaaagatgcgaaatcaaacaacgccgcacaagacgacgaacaa 39657440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 71 - 149
Target Start/End: Original strand, 1236722 - 1236799
Alignment:
Q  71 gatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacaca 149  Q
    |||||||||||| |||||||  || ||||  ||||| |||  ||||||||||||||||||||||||  |||||||||||    
T  1236722 gatctttcaatatgaaccaacgaa-caccgcaacaagatgccaaatcaaacaacgccgcacaagacaacgaacaacaca 1236799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 71 - 149
Target Start/End: Original strand, 1239422 - 1239499
Alignment:
Q  71 gatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacaca 149  Q
    |||||||||||| |||||||  || ||||  ||||| |||  |||||||||||||||||||||||||  ||||||||||    
T  1239422 gatctttcaatatgaaccaacgaa-caccgcaacaagatgccaaatcaaacaacgccgcacaagacgatgaacaacaca 1239499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 112 - 158
Target Start/End: Complemental strand, 15046942 - 15046896
Alignment:
Q  112 gaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacac 158  Q
    ||||||||||| | |||||||||||| ||||||||||| ||||||||    
T  15046942 gaaatcaaacagcaccgcacaagacgacgaacaacacaccaccacac 15046896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 71 - 149
Target Start/End: Complemental strand, 15344372 - 15344295
Alignment:
Q  71 gatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacaca 149  Q
    |||||||||||| |||||||  || ||||  ||||| |||  ||||||||| ||||||||||||||| |||||||||||    
T  15344372 gatctttcaatatgaaccaacgaa-caccgcaacaagatgtcaaatcaaactacgccgcacaagacgacgaacaacaca 15344295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 71 - 149
Target Start/End: Complemental strand, 15433437 - 15433360
Alignment:
Q  71 gatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacaca 149  Q
    |||||||||||| |||||||  || ||||  ||||| |||  ||||||||| ||||||||||||||| |||||||||||    
T  15433437 gatctttcaatatgaaccaacgaa-caccgcaacaagatgtcaaatcaaactacgccgcacaagacgacgaacaacaca 15433360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 71 - 149
Target Start/End: Complemental strand, 15524741 - 15524664
Alignment:
Q  71 gatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacaca 149  Q
    |||||||||||| |||||||  || ||||  ||||| |||  ||||||||| ||||||||||||||| |||||||||||    
T  15524741 gatctttcaatatgaaccaacgaa-caccgcaacaagatgtcaaatcaaactacgccgcacaagacgacgaacaacaca 15524664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 71 - 145
Target Start/End: Original strand, 20227306 - 20227379
Alignment:
Q  71 gatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaa 145  Q
    ||||||| ||||| ||||||| ||| || | ||||||||| |||||||||||||| |||| |||||| |||||||    
T  20227306 gatcttttaatagaaaccaaacaaatac-acaacaaaatgtgaaatcaaacaacgtcgcagaagacgacgaacaa 20227379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 180 - 228
Target Start/End: Complemental strand, 17949226 - 17949178
Alignment:
Q  180 aaaaaatctagatatatgtgaaaactccttatttagattgaaatagaga 228  Q
    |||||||| |||| ||||||||||   ||||||||||||||||||||||    
T  17949226 aaaaaatcaagatctatgtgaaaatcgcttatttagattgaaatagaga 17949178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 71 - 149
Target Start/End: Original strand, 25191092 - 25191167
Alignment:
Q  71 gatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacaca 149  Q
    ||||||||||||||||  ||| |||||||   |||||| | ||||||||||   ||||||||||||| |||||||||||    
T  25191092 gatctttcaataggaaataaacaaacaccgcgacaaaaagcgaaatcaaac---gccgcacaagacgacgaacaacaca 25191167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 112 - 221
Target Start/End: Original strand, 43890160 - 43890271
Alignment:
Q  112 gaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaaacctcgaag--aaaaaatctagatatatgtgaaaactcctt 209  Q
    ||||||||| |||| ||||||||||| ||||||||| | ||||| || |||| ||| |||   | |||  ||||||||||||| ||||| ||||   |||    
T  43890160 gaaatcaaataacgtcgcacaagacgacgaacaacaaatcaccatacttagatgatgaaattacaaagaaaaaaaatctagatctatgtcaaaatcactt 43890259  T
Q  210 atttagattgaa 221  Q
    ||||||||||||    
T  43890260 atttagattgaa 43890271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 71 - 145
Target Start/End: Original strand, 45445836 - 45445907
Alignment:
Q  71 gatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaa 145  Q
    ||||||||||||||||  ||| |||||||   |||||||| |||||||   |||||||||||||||| |||||||    
T  45445836 gatctttcaataggaaataaacaaacaccgcgacaaaatgcgaaatca---aacgccgcacaagacgacgaacaa 45445907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 72; Significance: 2e-32; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 21 - 228
Target Start/End: Original strand, 10359492 - 10359699
Alignment:
Q  21 catgccaccagatctgcaatgttgatgtccaagtcgtttactgaatagaagatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaa 120  Q
    |||||| | |||||||||| ||||||| |||| || |||| ||||||   |||||||||||| ||| ||||| ||||||| || || | | |||||||||    
T  10359492 catgcctcaagatctgcaacgttgatgcccaaatcttttattgaataatcgatctttcaatatgaatcaaatgaacaccacaagaagacgggaaatcaaa 10359591  T
Q  121 caacgccgcacaagacgccgaacaacacagcaccacacctagacgataaaacctcgaagaaaaaatctagatatatgtgaaaactccttatttagattga 220  Q
    |||| ||||| |||||| ||||||||| | |||||||| |||| ||| ||| | ||||||||||| |||||||||||| ||||   ||||||||||| ||    
T  10359592 caacaccgcaaaagacggcgaacaacaaaccaccacacttagatgatgaaatcacgaagaaaaaacctagatatatgttaaaatcacttatttagatcga 10359691  T
Q  221 aatagaga 228  Q
    ||||||||    
T  10359692 aatagaga 10359699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 71 - 223
Target Start/End: Complemental strand, 868256 - 868105
Alignment:
Q  71 gatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaa 170  Q
    |||||||||||| ||| ||||| ||||||  || || | | |||||||||||||||||||||||||| ||||||||| | |||||||| |||| ||| ||    
T  868256 gatctttcaatatgaatcaaatgaacaccgcaagaagacgggaaatcaaacaacgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaa 868157  T
Q  171 acctcgaagaaaaaatctagatatatgtgaaaactccttatttagattgaaat 223  Q
    | | | ||| |||||||||||| ||||||||||   |||||||||||||||||    
T  868156 atcacaaag-aaaaatctagatctatgtgaaaataacttatttagattgaaat 868105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 112 - 228
Target Start/End: Original strand, 8009397 - 8009512
Alignment:
Q  112 gaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaaacctcgaagaaaaaatctagatatatgtgaaaactccttat 211  Q
    |||||||||||||||||||||||||| ||||||||| | |||||||| |||| ||| ||| | | ||||||||| |||||| ||||||||||   |||||    
T  8009397 gaaatcaaacaacgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaaaaaa-ctagatctatgtgaaaatcacttat 8009495  T
Q  212 ttagattgaaatagaga 228  Q
    |||||||||||||||||    
T  8009496 ttagattgaaatagaga 8009512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 35964900 - 35965128
Alignment:
Q  1 attaaagtgacatgaatgctcatgccaccagatctgcaatgttgatgtccaagtcgtttactgaatagaagatctttcaataggaaccaaataaacacca 100  Q
    |||||||||||   ||| |||||||| || ||||||||| ||||| |||||| || || | ||||||   ||||||| |||| ||| ||||| |||||||    
T  35964900 attaaagtgactgaaatactcatgcctccggatctgcaacgttgacgtccaaatctttgattgaataatcgatcttttaatatgaatcaaatgaacacca 35964999  T
Q  101 aaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaaacctcgaagaaaaaatctagatatatgtga 200  Q
     || || | | |||||||||||||||| |||| |||| ||||||||||| ||||||||   || ||  ||| | |||| |||||| |||||| |||||||    
T  35965000 caataagacgggaaatcaaacaacgccacacaggacgacgaacaacacaccaccacactcggatgacgaaatcacgaaaaaaaaacctagatctatgtga 35965099  T
Q  201 aaactc-cttatttagattgaaatagaga 228  Q
    ||| || |||||| |||||||||||||||    
T  35965100 aaaatcacttattcagattgaaatagaga 35965128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 72 - 228
Target Start/End: Complemental strand, 51318078 - 51317922
Alignment:
Q  72 atctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaaa 171  Q
    ||||||||||| ||| ||||| ||||||  || || | | |||||||||||| ||||||||||||| ||||||||| | |||||||| |||| ||| |||    
T  51318078 atctttcaatatgaatcaaattaacaccgcaagaagacgggaaatcaaacaatgccgcacaagacgacgaacaacaaatcaccacacttagatgatgaaa 51317979  T
Q  172 cctcgaagaaaaaatctagatatatgtgaaaactccttatttagattgaaatagaga 228  Q
     |   ||||||||| |||||| ||||||||||   ||||||||||||||||||||||    
T  51317978 tcaaaaagaaaaaacctagatctatgtgaaaatcacttatttagattgaaatagaga 51317922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 71 - 228
Target Start/End: Original strand, 18138908 - 18139066
Alignment:
Q  71 gatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaa 170  Q
    ||||||||||||| || ||||| |||||   ||||| |||  ||||||||||||||||||||||||| ||||||||||| ||||||||  ||  ||  ||    
T  18138908 gatctttcaatagaaatcaaatgaacactgcaacaagatggaaaatcaaacaacgccgcacaagacgacgaacaacacaccaccacactcaggtgacgaa 18139007  T
Q  171 acctcgaagaaaaaatctagatatatgtgaaaactc-cttatttagattgaaatagaga 228  Q
    | |   ||||||||| |||||| |||||||||| || ||||||||||||||||||||||    
T  18139008 atcattaagaaaaaacctagatgtatgtgaaaaatcacttatttagattgaaatagaga 18139066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 71 - 228
Target Start/End: Original strand, 49126121 - 49126279
Alignment:
Q  71 gatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaa 170  Q
    ||||||||||||| || ||||| |||||   ||||| |||  ||||||||||||||||||||||||| ||||||||||| ||||||||  ||  ||  ||    
T  49126121 gatctttcaatagaaatcaaatgaacactgcaacaagatggaaaatcaaacaacgccgcacaagacgacgaacaacacaccaccacactcaggtgacgaa 49126220  T
Q  171 acctcgaagaaaaaatctagatatatgtgaaaactc-cttatttagattgaaatagaga 228  Q
    | |   ||||||||| |||||| |||||||||| || ||||||||||||||||||||||    
T  49126221 atcattaagaaaaaacctagatgtatgtgaaaaatcacttatttagattgaaatagaga 49126279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 72 - 223
Target Start/End: Original strand, 3336152 - 3336304
Alignment:
Q  72 atctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacg-ccgcacaagacgccgaacaacacagcaccacacctagacgataaa 170  Q
    ||||||||||| ||| ||||| ||||||  ||||| |||  ||||||||||||| ||||||| |||| ||||||||||| ||||||||  ||| || |||    
T  3336152 atctttcaatatgaatcaaatgaacaccgcaacaagatggaaaatcaaacaacgtccgcacaggacgacgaacaacacaccaccacactcagatgacaaa 3336251  T
Q  171 acctcgaagaaaaaatctagatatatgtgaaaactccttatttagattgaaat 223  Q
    | | ||||||||||| ||||||| |||||||||   ||| |||||||||||||    
T  3336252 atcacgaagaaaaaacctagatagatgtgaaaataacttgtttagattgaaat 3336304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 71 - 228
Target Start/End: Complemental strand, 4643952 - 4643794
Alignment:
Q  71 gatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaa 170  Q
    |||||||||||| ||| ||||| ||||||  |  || | | |||||||||||||||||||||||||| ||||||||| | |||||||| |||| ||| ||    
T  4643952 gatctttcaatatgaatcaaatgaacaccgcacaaagacgggaaatcaaacaacgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaa 4643853  T
Q  171 acctcgaag--aaaaaatctagatatatgtgaaaactccttatttagattgaaatagaga 228  Q
    | | | |||  ||||||||||||| ||||||||| |  ||||||||||||||||||||||    
T  4643852 atcacaaagaaaaaaaatctagatctatgtgaaatc-acttatttagattgaaatagaga 4643794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 113 - 228
Target Start/End: Original strand, 9645586 - 9645702
Alignment:
Q  113 aaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaaacctcgaag-aaaaaatctagatatatgtgaaaactccttat 211  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||| |||| ||| ||| | | ||| |||||| |||||| |||||||||    |||||    
T  9645586 aaatcaaacaacgccgcacaagacgacgaacaacacaccaccacacttagatgatgaaatcgcaaagaaaaaaacctagatctatgtgaaagtcacttat 9645685  T
Q  212 ttagattgaaatagaga 228  Q
    |||||||||||||||||    
T  9645686 ttagattgaaatagaga 9645702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 72 - 226
Target Start/End: Complemental strand, 2624589 - 2624436
Alignment:
Q  72 atctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacac-ctagacgataaa 170  Q
    ||||||||||| ||| ||||||||||||  ||||| | | |||||||||| ||||||||||||||| ||||||||||| |||||||| |  ||||   ||    
T  2624589 atctttcaatatgaatcaaataaacaccgcaacaagacgggaaatcaaactacgccgcacaagacgacgaacaacacaccaccacactcatgacg---aa 2624493  T
Q  171 acctcgaag-aaaaaatctagatatatgtgaaaactccttatttagattgaaataga 226  Q
    | | ||||| |||||| |||||| ||||||||||   ||||||||||||||||||||    
T  2624492 atcacgaagaaaaaaacctagatctatgtgaaaatcacttatttagattgaaataga 2624436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 75 - 228
Target Start/End: Original strand, 46991129 - 46991283
Alignment:
Q  75 tttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaaacct 174  Q
    |||||||| ||| ||||| ||||||  ||||| ||| |||||||||||||||| || |||||| | ||||||||| ||||||||  ||| || |||| |     
T  46991129 tttcaatatgaatcaaatgaacaccgcaacaagatgggaaatcaaacaacgccacagaagacgacaaacaacacaccaccacactcagatgacaaaatca 46991228  T
Q  175 cgaag-aaaaaatctagatatatgtgaaaactccttatttagattgaaatagaga 228  Q
     |||| ||||||||||||| ||||||||||   || |||||||||||||||||||    
T  46991229 tgaagaaaaaaatctagatctatgtgaaaatcactcatttagattgaaatagaga 46991283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 71 - 228
Target Start/End: Complemental strand, 25273977 - 25273816
Alignment:
Q  71 gatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaa 170  Q
    |||||||||||| ||| ||||| ||||||  |  || | | |||||||||||||||||||||||||| ||||||||| | |||||||| |||| ||| ||    
T  25273977 gatctttcaatatgaatcaaatgaacaccgcacgaagacgggaaatcaaacaacgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaa 25273878  T
Q  171 acctcgaag----aaaaaatctagatatatgtgaaaactccttatttagattgaaatagaga 228  Q
    | | | |||    |||||| |||||| ||||||||||   ||||||||||||||||||||||    
T  25273877 atcacaaagaaaaaaaaaacctagatctatgtgaaaatcacttatttagattgaaatagaga 25273816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 113 - 224
Target Start/End: Complemental strand, 43444445 - 43444333
Alignment:
Q  113 aaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaaacctcgaag-aaaaaatctagatatatgtgaaaactccttat 211  Q
    ||||||||||||||||||||||||| ||||||||| | |||||||| |||| ||| |||   | ||| |||||| |||||||||||||||||   |||||    
T  43444445 aaatcaaacaacgccgcacaagacgacgaacaacaaatcaccacacttagatgatgaaattacaaagaaaaaaacctagatatatgtgaaaatcacttat 43444346  T
Q  212 ttagattgaaata 224  Q
    |||||||||||||    
T  43444345 ttagattgaaata 43444333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 113 - 228
Target Start/End: Original strand, 10389791 - 10389906
Alignment:
Q  113 aaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaaacctcgaagaaaaaatctagatatatgtgaaaactccttatt 212  Q
    ||||||||||||||||||||||||| ||||||||| | |||||||| |||| ||| ||| |   | ||||||| |||||| |||||||||    ||||||    
T  10389791 aaatcaaacaacgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcaaaaggaaaaaacctagatctatgtgaaagtcacttatt 10389890  T
Q  213 tagattgaaatagaga 228  Q
    ||||||||||||||||    
T  10389891 tagattgaaatagaga 10389906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 71 - 225
Target Start/End: Complemental strand, 12265548 - 12265394
Alignment:
Q  71 gatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaa 170  Q
    |||||||||||| ||| ||| | ||||||| ||| | | |||||||||||||||||||||| ||||| ||||||||| | | ||||||  ||| || |||    
T  12265548 gatctttcaatatgaatcaagtgaacaccacaacgatacgagaaatcaaacaacgccgcac-agacgacgaacaacaaaccgccacactcagatgacaaa 12265450  T
Q  171 acctcgaagaaaaaatctagatatatgtgaaaactc-cttatttagattgaaatag 225  Q
    | | || ||| |||| |||||| |||||||||| || |||||||||||||||||||    
T  12265449 atcacgtagagaaaacctagatctatgtgaaaaatcacttatttagattgaaatag 12265394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 113 - 224
Target Start/End: Complemental strand, 35261243 - 35261132
Alignment:
Q  113 aaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaaacctcgaagaaaaaatctagatatatgtgaaaactccttatt 212  Q
    |||||||||||||||||| |||||| | ||||||||| |||||||| |||| ||| ||| | ||||||||||| ||| || ||||||||||   ||||||    
T  35261243 aaatcaaacaacgccgcagaagacgacaaacaacacaccaccacacttagatgatcaaatcacgaagaaaaaacctaaatctatgtgaaaatcacttatt 35261144  T
Q  213 tagattgaaata 224  Q
    ||||||| ||||    
T  35261143 tagattgcaata 35261132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 71 - 228
Target Start/End: Complemental strand, 56194695 - 56194535
Alignment:
Q  71 gatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaa 170  Q
    ||||||||||||||||  |||| ||||||  || || | | |||| ||||||||||||||||||||| ||||||||| | |||||||| |||| ||| ||    
T  56194695 gatctttcaataggaataaaatgaacaccgcaagaagacgggaaagcaaacaacgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaa 56194596  T
Q  171 acctc---gaagaaaaaatctagatatatgtgaaaactccttatttagattgaaatagaga 228  Q
    | | |   ||| |||||| |||||| |||||||||    ||||||||||||||||||||||    
T  56194595 atcacaaagaaaaaaaaacctagatctatgtgaaagtcacttatttagattgaaatagaga 56194535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 76 - 228
Target Start/End: Complemental strand, 21090241 - 21090089
Alignment:
Q  76 ttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaaacctc 175  Q
    ||||||| ||| ||||| ||||||  || |||| || ||||||||||||| || |||||||| ||||||||| | ||||| |  |||| ||| ||| | |    
T  21090241 ttcaatatgaatcaaatgaacaccgcaaaaaaacgaaaaatcaaacaacgtcgtacaagacgacgaacaacaaaccaccatatttagatgatgaaatcac 21090142  T
Q  176 gaagaaaaaatctagatatatgtgaaaactccttatttagattgaaatagaga 228  Q
    |||||||||| ||| || ||||||||||   |||||||| |||||||||||||    
T  21090141 gaagaaaaaacctaaatctatgtgaaaatcacttatttatattgaaatagaga 21090089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 27593753 - 27593952
Alignment:
Q  1 attaaagtgacatgaatgctcatgccaccagatctgcaatgttgatgtccaagtcgtttactgaatagaagatctttcaataggaaccaaataaacacca 100  Q
    |||||||||||| |||| |||||| | ||||||||||||||||||  ||||| || |||| ||||||   |||||||||||| |||  ||||||||| |     
T  27593753 attaaagtgacaggaatactcatggctccagatctgcaatgttga-ctccaaatcttttattgaataatcgatctttcaatatgaattaaataaacatcg 27593851  T
Q  101 aaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaaacctcgaagaaaaaatctagatatatgtga 200  Q
     || || | | ||||||||| || | ||||||||| | ||||||||||| ||||||||  |||  |  ||| | |||||||||||| ||||| |||||||    
T  27593852 caaaaagacgggaaatcaaaaaaagtcgcacaagatgacgaacaacacaccaccacactcagataacgaaatcacgaagaaaaaatatagatctatgtga 27593951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 112 - 224
Target Start/End: Original strand, 37188630 - 37188741
Alignment:
Q  112 gaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaaacctcgaagaaaaaatctagatatatgtgaaaactccttat 211  Q
    ||||||||||| |||||||||| ||| ||||||||| | |||||||| || | ||| ||| | | ||||||||| |||||||||||||||||   |||||    
T  37188630 gaaatcaaacagcgccgcacaaaacgacgaacaacaaaccaccacacttaaatgatgaaatcacaaagaaaaaa-ctagatatatgtgaaaatcacttat 37188728  T
Q  212 ttagattgaaata 224  Q
    |||||||||||||    
T  37188729 ttagattgaaata 37188741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 71 - 224
Target Start/End: Original strand, 53616645 - 53616800
Alignment:
Q  71 gatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaa 170  Q
    |||||||||||| ||| ||||| ||||||  |  || | | |||||||||||||||||||||||||| ||||||||| | |||||||| |||| ||| ||    
T  53616645 gatctttcaatatgaatcaaatgaacaccgcacgaagacgggaaatcaaacaacgccgcacaagacgacgaacaacaaatcaccacacttagatgatgaa 53616744  T
Q  171 acctcgaag--aaaaaatctagatatatgtgaaaactccttatttagattgaaata 224  Q
    |   | |||  |||||| |||||| ||||||||||   ||||||||||||||||||    
T  53616745 attacaaagaaaaaaaacctagatctatgtgaaaatcacttatttagattgaaata 53616800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 112 - 228
Target Start/End: Complemental strand, 1531961 - 1531843
Alignment:
Q  112 gaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaaacctcgaagaaaaaa--tctagatatatgtgaaaactcctt 209  Q
    |||||||||||||||| ||||||||| |  |||||| | |||||||| |||| ||| ||| | | |||||||||  ||||||| ||||||||||   |||    
T  1531961 gaaatcaaacaacgccacacaagacgacagacaacaaaccaccacacttagatgatgaaatcacaaagaaaaaaaatctagatctatgtgaaaatcactt 1531862  T
Q  210 atttagattgaaatagaga 228  Q
    |||||||||||||||||||    
T  1531861 atttagattgaaatagaga 1531843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 112 - 224
Target Start/End: Complemental strand, 29965688 - 29965574
Alignment:
Q  112 gaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaaacctcgaag--aaaaaatctagatatatgtgaaaactcctt 209  Q
    |||||||||||||||||||||||||| ||||||||| | |||||||| |||| ||| |||   | |||  |||||| |||||| ||||||||||   |||    
T  29965688 gaaatcaaacaacgccgcacaagacgacgaacaacaaatcaccacacttagatgatgaaattacaaagaaaaaaaacctagatctatgtgaaaatcactt 29965589  T
Q  210 atttagattgaaata 224  Q
    |||||||||||||||    
T  29965588 atttagattgaaata 29965574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 113 - 228
Target Start/End: Original strand, 31381709 - 31381824
Alignment:
Q  113 aaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaaacctcgaagaaaaaatctagatatatgtgaaaactccttatt 212  Q
    |||||||||||||| |||||||||| ||||||||| | |||||||| |||| ||| ||| | | |||||||||  ||||| ||||||||||   ||||||    
T  31381709 aaatcaaacaacgctgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaaaaaacttagatctatgtgaaaatcacttatt 31381808  T
Q  213 tagattgaaatagaga 228  Q
    || ||||||| |||||    
T  31381809 taaattgaaaaagaga 31381824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 113 - 228
Target Start/End: Original strand, 34024474 - 34024589
Alignment:
Q  113 aaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaaacctcgaagaaaaaatctagatatatgtgaaaactccttatt 212  Q
    ||||||||||||| |  |||||||| ||||||||| | |||||||| |||| ||| ||| |   ||||||||| |||||| ||||||||||   ||||||    
T  34024474 aaatcaaacaacgtcatacaagacgacgaacaacaaaccaccacacttagatgatgaaatcaaaaagaaaaaacctagatctatgtgaaaataacttatt 34024573  T
Q  213 tagattgaaatagaga 228  Q
    ||||||||||||||||    
T  34024574 tagattgaaatagaga 34024589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 112 - 228
Target Start/End: Original strand, 38706746 - 38706863
Alignment:
Q  112 gaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaaacctcgaagaaaaaatc-tagatatatgtgaaaactcctta 210  Q
    ||||| ||||||||| |||||||||| ||||||||| | |||||||| |||| ||| ||| | | ||||||||| | || || ||||||||||   ||||    
T  38706746 gaaatgaaacaacgctgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaaaaaaacctaaatctatgtgaaaatcactta 38706845  T
Q  211 tttagattgaaatagaga 228  Q
    ||||||||||||||||||    
T  38706846 tttagattgaaatagaga 38706863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 26123426 - 26123280
Alignment:
Q  1 attaaagtgacatgaatgctcatgccaccagatctgcaatgttgatgtccaagtcgtttactgaatagaagatctttcaataggaaccaaataaacacca 100  Q
    ||||||||||||  ||| |||||||| || ||| |||||  |||| |  |||||| || | |||| ||  |||||||||||| ||||||||| ||||| |    
T  26123426 attaaagtgacaataatactcatgcctccggatttgcaacattgacgcacaagtcattcattgaagagccgatctttcaataagaaccaaatgaacacta 26123327  T
Q  101 aaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaaca 147  Q
     ||||| |||| |||| ||||||| |||||||| ||| |||||||||    
T  26123326 caacaagatgaaaaattaaacaacaccgcacaaaacgacgaacaaca 26123280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 71 - 149
Target Start/End: Complemental strand, 36194791 - 36194709
Alignment:
Q  71 gatctttcaataggaaccaaataaacacc--aaaacaaa--atgagaaatcaaacaacgccgcacaagacgccgaacaacaca 149  Q
    |||||||||||| ||||||||  ||||||  | ||||||  ||| |||||||||||||||||||||||||| |||||||||||    
T  36194791 gatctttcaatacgaaccaaacgaacaccgcacaacaaaggatgcgaaatcaaacaacgccgcacaagacgacgaacaacaca 36194709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 71 - 228
Target Start/End: Original strand, 43154009 - 43154174
Alignment:
Q  71 gatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaa 170  Q
    |||||||||||| ||| ||||| ||||||  |  || | | |||||||||||||||| ||||||||| ||||||||| | |||||||| || | ||||||    
T  43154009 gatctttcaatatgaatcaaatgaacaccgcacgaagacgggaaatcaaacaacgccacacaagacgacgaacaacaaaccaccacacttaaatgataaa 43154108  T
Q  171 acctcgaag--------aaaaaatctagatatatgtgaaaactccttatttagattgaaatagaga 228  Q
    | | | |||        |||||| |||||| ||||||||||   ||||||||||||||||||||||    
T  43154109 atcacaaagaaaaaacaaaaaaacctagatctatgtgaaaatcacttatttagattgaaatagaga 43154174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 112 - 224
Target Start/End: Original strand, 9528913 - 9529027
Alignment:
Q  112 gaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaaacctcgaagaaaaaatc--tagatatatgtgaaaactcctt 209  Q
    |||||||||||||||||||||||||| ||||||||| | || ||||| |||| ||| ||| | | |||||||||    || || ||||||||||   |||    
T  9528913 gaaatcaaacaacgccgcacaagacgacgaacaacaaaccatcacacttagatgatgaaatcacaaagaaaaaaaacataaatctatgtgaaaatcactt 9529012  T
Q  210 atttagattgaaata 224  Q
    |||||||||||||||    
T  9529013 atttagattgaaata 9529027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 75 - 185
Target Start/End: Original strand, 36204415 - 36204526
Alignment:
Q  75 tttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacg-ccgcacaagacgccgaacaacacagcaccacacctagacgataaaacc 173  Q
    |||||||| ||||||||| ||||||  ||||| ||| |||||||||||||| ||| ||| |||| ||||||||||| | || ||| |||||||  ||| |    
T  36204415 tttcaatatgaaccaaatgaacaccgcaacaatatgcgaaatcaaacaacgcccgtacaggacgacgaacaacacaacgccgcacttagacgacgaaatc 36204514  T
Q  174 tcgaagaaaaaa 185  Q
     |||||||||||    
T  36204515 acgaagaaaaaa 36204526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 71 - 149
Target Start/End: Complemental strand, 9643470 - 9643392
Alignment:
Q  71 gatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacaca 149  Q
    ||||||| |||| ||||||||  |||||   ||||| |||||||||||||||||| ||| ||||||| |||||||||||    
T  9643470 gatcttttaatatgaaccaaacgaacactgcaacaagatgagaaatcaaacaacgtcgctcaagacgacgaacaacaca 9643392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 71 - 157
Target Start/End: Complemental strand, 47417756 - 47417670
Alignment:
Q  71 gatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacacagcaccaca 157  Q
    |||||||||||| ||| ||||| ||||||  |  || | | |||||||||||||||||||||||||| ||||||||| | |||||||    
T  47417756 gatctttcaatatgaatcaaatgaacaccgcacgaagacgggaaatcaaacaacgccgcacaagacgacgaacaacaaatcaccaca 47417670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 71 - 149
Target Start/End: Original strand, 51888238 - 51888316
Alignment:
Q  71 gatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacaca 149  Q
    |||||||||||| ||||||||  ||||||  ||||| ||| |||||||||||||| |||| ||||||  ||||||||||    
T  51888238 gatctttcaatatgaaccaaacgaacaccgcaacaagatgcgaaatcaaacaacgtcgcataagacgatgaacaacaca 51888316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 112 - 185
Target Start/End: Complemental strand, 6972863 - 6972790
Alignment:
Q  112 gaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaaacctcgaagaaaaaa 185  Q
    |||| ||||||||||||||||||||| ||||||||| | |||||||| |||| ||| ||| | | |||||||||    
T  6972863 gaaagcaaacaacgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaaaaaa 6972790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 112 - 149
Target Start/End: Complemental strand, 22300890 - 22300853
Alignment:
Q  112 gaaatcaaacaacgccgcacaagacgccgaacaacaca 149  Q
    |||||||||||||||||||||||||| |||||||||||    
T  22300890 gaaatcaaacaacgccgcacaagacgacgaacaacaca 22300853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 100 - 149
Target Start/End: Original strand, 47320447 - 47320496
Alignment:
Q  100 aaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacaca 149  Q
    ||||||| |||  ||||||||||||||||||||||||| |||||||||||    
T  47320447 aaaacaatatgccaaatcaaacaacgccgcacaagacgacgaacaacaca 47320496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 70 - 224
Target Start/End: Original strand, 50766506 - 50766658
Alignment:
Q  70 agatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataa 169  Q
    ||||||||||||| ||| ||||| ||||||  |  || | | ||||||||||||||||||||||||   ||||||||| | |||||||| |||| ||| |    
T  50766506 agatctttcaatatgaatcaaatgaacaccgcacgaagacgggaaatcaaacaacgccgcacaaga---cgaacaacaaatcaccacacttagatgatga 50766602  T
Q  170 aacctcgaagaaaaaatc-tagatatatgtgaaaactccttatttagattgaaata 224  Q
    ||   | ||||||||| | ||||| ||||||||||    |||||||||||||||||    
T  50766603 aattacaaagaaaaaaacttagatctatgtgaaaatcatttatttagattgaaata 50766658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 71 - 149
Target Start/End: Complemental strand, 27652026 - 27651944
Alignment:
Q  71 gatctttcaataggaaccaaataaacacc--aaaacaaa--atgagaaatcaaacaacgccgcacaagacgccgaacaacaca 149  Q
    |||||||||||| ||||||||  ||||||  | ||||||  ||| ||||||||||||| |||||||||||| |||||||||||    
T  27652026 gatctttcaatacgaaccaaacgaacaccgcacaacaaaggatgcgaaatcaaacaacaccgcacaagacgacgaacaacaca 27651944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 70 - 149
Target Start/End: Original strand, 22038828 - 22038907
Alignment:
Q  70 agatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacaca 149  Q
    ||||||||||||| ||||||||  | ||||| ||||| | | |||||||||||||||| ||||| | | |||||||||||    
T  22038828 agatctttcaatatgaaccaaacgagcaccacaacaagacgcgaaatcaaacaacgccacacaaaaggacgaacaacaca 22038907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 71 - 158
Target Start/End: Original strand, 31359774 - 31359861
Alignment:
Q  71 gatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacac 158  Q
    ||||||| ||||||||||||  ||||||   ||||| | | ||||||| |||||| ||||||||||| |||| |||||| ||||||||    
T  31359774 gatctttaaataggaaccaagcaaacactgcaacaagacgtgaaatcatacaacgtcgcacaagacgacgaataacacaacaccacac 31359861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 74 - 149
Target Start/End: Complemental strand, 43853521 - 43853446
Alignment:
Q  74 ctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacaca 149  Q
    ||||||||| ||||||||| | ||||  ||||| | | |||||||||||||||||||||||| |  ||||||||||    
T  43853521 ctttcaatatgaaccaaatgagcaccgcaacaatacgcgaaatcaaacaacgccgcacaagatgatgaacaacaca 43853446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 70 - 166
Target Start/End: Complemental strand, 32766597 - 32766504
Alignment:
Q  70 agatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacga 166  Q
    |||||||| |||||||||  || |||||||   |||||| | ||||||||||   ||||||||||||| ||||||||||| |||| ||| |||||||    
T  32766597 agatcttttaataggaactgaacaaacaccgcgacaaaacgcgaaatcaaac---gccgcacaagacgacgaacaacacaacaccgcacttagacga 32766504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 149
Target Start/End: Original strand, 9145954 - 9145991
Alignment:
Q  112 gaaatcaaacaacgccgcacaagacgccgaacaacaca 149  Q
    |||||||||||| ||||||||||||| |||||||||||    
T  9145954 gaaatcaaacaatgccgcacaagacgacgaacaacaca 9145991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 114 - 167
Target Start/End: Complemental strand, 28857441 - 28857388
Alignment:
Q  114 aatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgat 167  Q
    |||||||||||||||||||||||  ||||||||||| | || ||| ||||||||    
T  28857441 aatcaaacaacgccgcacaagacaacgaacaacacaacgccgcacttagacgat 28857388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 75 - 228
Target Start/End: Original strand, 32952749 - 32952899
Alignment:
Q  75 tttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaaacct 174  Q
    |||||||| |||  |||| ||||||  ||||| |||| |||||||||||| ||||| |||||| | ||||||||| || ||||| |||| ||  ||| |     
T  32952749 tttcaatatgaattaaatgaacaccgtaacaagatga-aaatcaaacaac-ccgcataagacgacaaacaacacaccaacacacttagatgacgaaatca 32952846  T
Q  175 cgaagaaaaaatctagatatatgtgaaaactccttatttagattgaaatagaga 228  Q
    | ||||||||| |||||| ||||||||||   ||||||||  ||||||||||||    
T  32952847 caaagaaaaaa-ctagatctatgtgaaaaacacttatttaatttgaaatagaga 32952899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 156
Target Start/End: Complemental strand, 49410317 - 49410232
Alignment:
Q  71 gatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacacagcaccac 156  Q
    |||||||||||| ||| ||||| ||||||  |  || | | ||||||||||||||| |||||||||| ||||||||| | ||||||    
T  49410317 gatctttcaatatgaatcaaatgaacaccgcacgaagacgggaaatcaaacaacgctgcacaagacgacgaacaacaaaccaccac 49410232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 7393353 - 7393301
Alignment:
Q  71 gatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaa 123  Q
    |||||||||||||||| ||||  ||||||| ||||| ||| ||||||||||||    
T  7393353 gatctttcaataggaatcaaacgaacaccacaacaagatgtgaaatcaaacaa 7393301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 69; Significance: 1e-30; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 112 - 228
Target Start/End: Original strand, 40659968 - 40660084
Alignment:
Q  112 gaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaaacctcgaagaaaaaatctagatatatgtgaaaactccttat 211  Q
    |||||||||||||||||||||||||| ||||||||| |||||||||| |||| ||| ||| | | |||||||||||||||| ||||||||||   |||||    
T  40659968 gaaatcaaacaacgccgcacaagacgacgaacaacaaagcaccacacttagatgatgaaatcacaaagaaaaaatctagatctatgtgaaaatcacttat 40660067  T
Q  212 ttagattgaaatagaga 228  Q
    |||||||||||||||||    
T  40660068 ttagattgaaatagaga 40660084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 71 - 228
Target Start/End: Complemental strand, 3725266 - 3725109
Alignment:
Q  71 gatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaa 170  Q
    |||||||||||| ||| ||||  ||||||| |  || | ||||||||||||||||||| |||||||  ||||||||| | |||||||| |||||||| ||    
T  3725266 gatctttcaatatgaatcaaacgaacaccacacaaagacgagaaatcaaacaacgccgtacaagacaacgaacaacaaaccaccacacttagacgatgaa 3725167  T
Q  171 acctcgaagaaaaaatctagatatatgtgaaaactccttatttagattgaaatagaga 228  Q
    | | | ||||||||||| |||| ||||||||||   |||||||| |||||||||||||    
T  3725166 atcacaaagaaaaaatcaagatctatgtgaaaatcacttatttatattgaaatagaga 3725109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 114 - 228
Target Start/End: Original strand, 40626066 - 40626180
Alignment:
Q  114 aatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaaacctcgaagaaaaaatctagatatatgtgaaaactccttattt 213  Q
    ||||||||||| |||||||||||| ||||||||| | |||||||| |||| ||| ||| | | |||||||||  ||||| ||||||||||  ||||||||    
T  40626066 aatcaaacaacaccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaaaaaacgtagatctatgtgaaaatcccttattt 40626165  T
Q  214 agattgaaatagaga 228  Q
    |||||||||||||||    
T  40626166 agattgaaatagaga 40626180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 71 - 228
Target Start/End: Complemental strand, 22421821 - 22421664
Alignment:
Q  71 gatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaa 170  Q
    |||||||||||| ||| ||||| ||||||  || || ||| ||||||||||||| |||| ||||| | ||||||||| | |||||||| |||| ||| ||    
T  22421821 gatctttcaatacgaatcaaatgaacaccgcaagaagatgggaaatcaaacaacaccgcgcaagatgacgaacaacaaaccaccacacttagatgatgaa 22421722  T
Q  171 acctcgaagaaaaaatctagatatatgtgaaaactccttatttagattgaaatagaga 228  Q
    | | | ||||||||| |||||| |||||||||    ||||||||||||||||||||||    
T  22421721 atcacaaagaaaaaacctagatctatgtgaaagtcacttatttagattgaaatagaga 22421664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 71 - 228
Target Start/End: Original strand, 26025405 - 26025562
Alignment:
Q  71 gatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaa 170  Q
    |||||||||| | ||| ||||| ||||||  || || | || ||||||||||||||||||||||||| ||| ||||| |  ||||||| || | ||| ||    
T  26025405 gatctttcaagatgaatcaaatgaacaccgcaagaagacgaaaaatcaaacaacgccgcacaagacgacgaccaacaaactaccacacttacatgatgaa 26025504  T
Q  171 acctcgaagaaaaaatctagatatatgtgaaaactccttatttagattgaaatagaga 228  Q
    | | | ||||||||| |||||| |||||||||||  ||||||||||||||||||||||    
T  26025505 atcacaaagaaaaaacctagatctatgtgaaaaccacttatttagattgaaatagaga 26025562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 71 - 228
Target Start/End: Complemental strand, 34599073 - 34598916
Alignment:
Q  71 gatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaa 170  Q
    |||||||||||| ||| ||||| ||||||  |  || |||  |||||||||||||||||||||||||  |||||||| | |||||||| |||| ||| ||    
T  34599073 gatctttcaatatgaatcaaatgaacaccgcacgaagatggaaaatcaaacaacgccgcacaagacgatgaacaacaaaccaccacacttagatgatgaa 34598974  T
Q  171 acctcgaagaaaaaatctagatatatgtgaaaactccttatttagattgaaatagaga 228  Q
    | | | || |||||| |||||| ||||||||||   ||||||||||||||||||||||    
T  34598973 atcacaaaaaaaaaaactagatctatgtgaaaatcacttatttagattgaaatagaga 34598916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 75 - 224
Target Start/End: Complemental strand, 45128286 - 45128136
Alignment:
Q  75 tttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaaacct 174  Q
    ||||||||||||  |||| ||||||  || || |||||||| ||||||||||||||||||||| ||||||||| | |||||||| |||| ||| ||| |     
T  45128286 tttcaataggaataaaatgaacaccgcaagaagatgagaaagcaaacaacgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatca 45128187  T
Q  175 cgaag-aaaaaatctagatatatgtgaaaactccttatttagattgaaata 224  Q
    | ||| |||||| |||||| |||||||||    ||||||||||||||||||    
T  45128186 caaagaaaaaaacctagatctatgtgaaagtcacttatttagattgaaata 45128136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 112 - 224
Target Start/End: Complemental strand, 4192883 - 4192771
Alignment:
Q  112 gaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaaacctcgaagaaaaaatctagatatatgtgaaaactccttat 211  Q
    ||||||||||||| || ||||||||| ||||||||| | |||||||| |||| ||| ||| | | ||||||||| ||| |||||||||||||   |||||    
T  4192883 gaaatcaaacaacaccacacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaaaaaacctaaatatatgtgaaaatcacttat 4192784  T
Q  212 ttagattgaaata 224  Q
    |||||||||||||    
T  4192783 ttagattgaaata 4192771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 113 - 228
Target Start/End: Original strand, 2808509 - 2808623
Alignment:
Q  113 aaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaaacctcgaagaaaaaatctagatatatgtgaaaactccttatt 212  Q
    ||||||||||||||||||||||||| ||||||||| | |||||||| |||| ||| ||| | | ||| ||||| |||||| ||||||||||   ||||||    
T  2808509 aaatcaaacaacgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaag-aaaaacctagatctatgtgaaaatcacttatt 2808607  T
Q  213 tagattgaaatagaga 228  Q
    |||| |||||||||||    
T  2808608 tagactgaaatagaga 2808623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 113 - 229
Target Start/End: Original strand, 9986379 - 9986499
Alignment:
Q  113 aaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaaacctcgaagaaaaaat----ctagatatatgtgaaaactcct 208  Q
    ||||||||||||||||||||||||| ||||||||| | |||||||| |||| ||| ||| | | ||||||||||    |||||| ||||||||||   ||    
T  9986379 aaatcaaacaacgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaaaaaataaacctagatctatgtgaaaatcact 9986478  T
Q  209 tatttagattgaaatagagat 229  Q
    ||||||||||||| |||||||    
T  9986479 tatttagattgaattagagat 9986499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 113 - 224
Target Start/End: Complemental strand, 32913285 - 32913174
Alignment:
Q  113 aaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaaacctcgaagaaaaaatctagatatatgtgaaaactccttatt 212  Q
    |||||||||| |||||||||||||| ||||||||| | |||||||| |||| ||| ||| | | ||||||||| |||||| ||||||||||   ||||||    
T  32913285 aaatcaaacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaaaaaacctagatctatgtgaaaatcacttatt 32913186  T
Q  213 tagattgaaata 224  Q
    || |||||||||    
T  32913185 taaattgaaata 32913174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 71 - 224
Target Start/End: Complemental strand, 8805952 - 8805799
Alignment:
Q  71 gatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaa 170  Q
    |||||||||||| ||| ||||| ||||||| |  || | | |||||||||||||| ||||||||||| ||||||||| | ||||||||  ||| ||| ||    
T  8805952 gatctttcaatatgaatcaaatgaacaccacacgaagacgggaaatcaaacaacgtcgcacaagacgacgaacaacaaaccaccacactcagatgatgaa 8805853  T
Q  171 acctcgaagaaaaaatctagatatatgtgaaaactccttatttagattgaaata 224  Q
    | | | ||||||||| ||||||  |||||||||   |||||||| |||||||||    
T  8805852 atcacaaagaaaaaacctagatccatgtgaaaatcacttatttaaattgaaata 8805799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 112 - 224
Target Start/End: Original strand, 8971663 - 8971775
Alignment:
Q  112 gaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaaacctcgaagaaaaaatctagatatatgtgaaaactccttat 211  Q
    ||||||||||||||| |||||||||| ||||||||| | ||||| || |||| ||| ||| | | ||||||||| |||||| ||||||||||   |||||    
T  8971663 gaaatcaaacaacgctgcacaagacgacgaacaacaaaccaccatacttagatgatgaaatcacaaagaaaaaacctagatctatgtgaaaatcacttat 8971762  T
Q  212 ttagattgaaata 224  Q
    ||||||| |||||    
T  8971763 ttagattaaaata 8971775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 31 - 163
Target Start/End: Original strand, 20047037 - 20047169
Alignment:
Q  31 gatctgcaatgttgatgtccaagtcgtttactgaatagaagatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgca 130  Q
    ||||||||| |||||||||||| || || | ||||||   ||||||||||||||||  |||| ||||||  || || |   |||||||||||||||||||    
T  20047037 gatctgcaacgttgatgtccaaatctttgattgaataatcgatctttcaataggaataaaatgaacaccgtaagaagacatgaaatcaaacaacgccgca 20047136  T
Q  131 caagacgccgaacaacacagcaccacacctaga 163  Q
    ||||||| ||||||||| | |||||||| ||||    
T  20047137 caagacgacgaacaacaaaccaccacacttaga 20047169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 113 - 224
Target Start/End: Original strand, 7015748 - 7015859
Alignment:
Q  113 aaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaaacctcgaagaaaaaatctagatatatgtgaaaactccttatt 212  Q
    ||||||||||||||||||||||||| ||||||||| | |||||||| |||| ||| ||| | | | ||||||| ||| || ||||||||||    |||||    
T  7015748 aaatcaaacaacgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaggaaaaaacctaaatctatgtgaaaatcaattatt 7015847  T
Q  213 tagattgaaata 224  Q
    ||||||||||||    
T  7015848 tagattgaaata 7015859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 71 - 228
Target Start/End: Complemental strand, 6173718 - 6173560
Alignment:
Q  71 gatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaa 170  Q
    |||||||||||| ||| ||||| ||||||  |  || |||  ||||||||||||||| ||||||||  ||||||||| | |||||||| | || ||| ||    
T  6173718 gatctttcaatatgaatcaaatgaacaccgcacaaagatggaaaatcaaacaacgccacacaagacaacgaacaacaaaccaccacacttcgatgatgaa 6173619  T
Q  171 acctcgaagaaaaaatc-tagatatatgtgaaaactccttatttagattgaaatagaga 228  Q
    | | | ||||||||| | ||||| ||||||||||   ||||||||||||||||||||||    
T  6173618 atcacaaagaaaaaaacctagatctatgtgaaaatcacttatttagattgaaatagaga 6173560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 113 - 224
Target Start/End: Complemental strand, 30420722 - 30420609
Alignment:
Q  113 aaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaaacctcgaag--aaaaaatctagatatatgtgaaaactcctta 210  Q
    ||||||||||||||||||||||||| ||||||||| | |||||||| |||| ||| |||   | |||  |||||| |||||| ||||||||||   ||||    
T  30420722 aaatcaaacaacgccgcacaagacgacgaacaacaaatcaccacacttagatgatgaaattacaaagaaaaaaaacctagatctatgtgaaaatcactta 30420623  T
Q  211 tttagattgaaata 224  Q
    ||||||||||||||    
T  30420622 tttagattgaaata 30420609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 71 - 149
Target Start/End: Original strand, 6358899 - 6358979
Alignment:
Q  71 gatctttcaataggaaccaaataaacacc--aaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacaca 149  Q
    |||||||||||| |||||||| |||||||  | ||||| ||| ||||||||||||||| |||||||||| |||||||||||    
T  6358899 gatctttcaataagaaccaaacaaacaccgtacaacaagatgcgaaatcaaacaacgctgcacaagacgacgaacaacaca 6358979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 110 - 167
Target Start/End: Original strand, 12647987 - 12648044
Alignment:
Q  110 gagaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgat 167  Q
    |||||||||||||||||||||||||||| ||||||||||| |||| ||| ||||||||    
T  12647987 gagaaatcaaacaacgccgcacaagacgacgaacaacacaacaccgcacttagacgat 12648044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 72 - 149
Target Start/End: Original strand, 29574657 - 29574734
Alignment:
Q  72 atctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacaca 149  Q
    ||||||||||| ||| |||| ||||||   ||||||||| |||||||||||| ||||||||||||| |||||||||||    
T  29574657 atctttcaatatgaatcaaacaaacactgcaacaaaatgtgaaatcaaacaatgccgcacaagacgacgaacaacaca 29574734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 71 - 224
Target Start/End: Complemental strand, 36234094 - 36233937
Alignment:
Q  71 gatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaa 170  Q
    |||||||||||| ||| ||||| ||||||  |  || | | |||||||||||||||||||||||||| ||||||| | | |||||||| |||| ||| ||    
T  36234094 gatctttcaatatgaatcaaatgaacaccgcacgaagacgggaaatcaaacaacgccgcacaagacgacgaacaaaaaatcaccacacttagatgatgaa 36233995  T
Q  171 acctcgaag----aaaaaatctagatatatgtgaaaactccttatttagattgaaata 224  Q
    |   | |||    ||||||||||||| ||||||||||   ||||||||||||||||||    
T  36233994 attacaaagaaaaaaaaaatctagatctatgtgaaaatcacttatttagattgaaata 36233937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 113 - 224
Target Start/End: Original strand, 3270266 - 3270377
Alignment:
Q  113 aaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaaacctcgaagaaaaaatctagatatatgtgaaaactccttatt 212  Q
    ||||||||||||||| ||||| ||| |||||||||   |||||||| |||| ||| ||| | | || |||||| |||||| ||||||||||   ||||||    
T  3270266 aaatcaaacaacgccccacaaaacgacgaacaacaagccaccacacttagatgatgaaatcacaaaaaaaaaacctagatctatgtgaaaatcacttatt 3270365  T
Q  213 tagattgaaata 224  Q
    ||||||||||||    
T  3270366 tagattgaaata 3270377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 71 - 224
Target Start/End: Original strand, 27249146 - 27249300
Alignment:
Q  71 gatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaa 170  Q
    |||||||||||| ||| ||||| ||||||  |  || | | |||||||||||||||||||||||||| ||||||||| | |||||||| ||||   | ||    
T  27249146 gatctttcaatatgaatcaaatgaacaccgcacgaagacgggaaatcaaacaacgccgcacaagacgacgaacaacaaatcaccacacttagatcttgaa 27249245  T
Q  171 acctcgaag-aaaaaatctagatatatgtgaaaactccttatttagattgaaata 224  Q
    |   | ||| |||||| |||||| ||||||||||   ||||||||||||||||||    
T  27249246 attacaaagaaaaaaacctagatctatgtgaaaatcacttatttagattgaaata 27249300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 71 - 224
Target Start/End: Complemental strand, 41431114 - 41430960
Alignment:
Q  71 gatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaa 170  Q
    ||||||||||| ||||  |||| ||||||  || || | | |||| ||||||||||||||||||||| ||||||||| | |||||||| |||| ||| ||    
T  41431114 gatctttcaattggaataaaatgaacaccgcaagaagacgggaaagcaaacaacgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaa 41431015  T
Q  171 acctcgaagaaaaa-atctagatatatgtgaaaactccttatttagattgaaata 224  Q
    | | | |||||||| | |||||| ||||| |||    ||||||||||||||||||    
T  41431014 atcacaaagaaaaacacctagatctatgtaaaagtgacttatttagattgaaata 41430960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 71 - 147
Target Start/End: Complemental strand, 14423397 - 14423321
Alignment:
Q  71 gatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaaca 147  Q
    |||||||||||| |||||||| |||||||  || |||||| ||||||||||||||  |||||||||| |||| ||||    
T  14423397 gatctttcaataagaaccaaacaaacaccgcaataaaatgtgaaatcaaacaacgatgcacaagacgacgaataaca 14423321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 73 - 149
Target Start/End: Original strand, 28533984 - 28534060
Alignment:
Q  73 tctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacaca 149  Q
    |||||||||||||| ||||  ||||||  ||||| ||  |||||||||||||| ||||||||||| |||||||||||    
T  28533984 tctttcaataggaatcaaacgaacaccgcaacaagatttgaaatcaaacaacgtcgcacaagacggcgaacaacaca 28534060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 71 - 147
Target Start/End: Original strand, 34128712 - 34128788
Alignment:
Q  71 gatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaaca 147  Q
    ||||||| ||||||||||||| |||||||| ||||| | |   |||||||||||| ||||||||||| |||||||||    
T  34128712 gatcttttaataggaaccaaacaaacaccacaacaagacgcacaatcaaacaacgtcgcacaagacgacgaacaaca 34128788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 119 - 226
Target Start/End: Complemental strand, 17319360 - 17319254
Alignment:
Q  119 aacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaaacctcgaagaaaaaatctagatatatgtgaaaactccttatttagatt 218  Q
    |||||||| ||||||||||  |||||||||| ||||||||  ||| ||  ||| |  |||||||||| |||||| |||||||||| |  |||||||||||    
T  17319360 aacaacgctgcacaagacgaagaacaacacaccaccacactcagatgacgaaatcatgaagaaaaaacctagatctatgtgaaaa-tagttatttagatt 17319262  T
Q  219 gaaataga 226  Q
    ||||||||    
T  17319261 gaaataga 17319254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 177 - 224
Target Start/End: Complemental strand, 27477134 - 27477087
Alignment:
Q  177 aagaaaaaatctagatatatgtgaaaactccttatttagattgaaata 224  Q
    |||||||||||||||| |||||||||| | ||||||||||||||||||    
T  27477134 aagaaaaaatctagatctatgtgaaaattacttatttagattgaaata 27477087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 72 - 158
Target Start/End: Original strand, 37614121 - 37614207
Alignment:
Q  72 atctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacac 158  Q
    ||||||||||| ||| ||||| ||||||  ||||| | |  ||||||||||||| |||||||||||  |||||||||| ||||||||    
T  37614121 atctttcaatatgaatcaaatgaacaccgcaacaagacggaaaatcaaacaacgacgcacaagacgaagaacaacacatcaccacac 37614207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 118 - 224
Target Start/End: Original strand, 21570449 - 21570557
Alignment:
Q  118 aaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaaacctcgaagaaaa--aatctagatatatgtgaaaactccttatttag 215  Q
    |||||||| | ||||||||| ||||||||| | |||||||| |||| ||| ||| | | || ||||  ||||||||| ||||||||||   |||||||||    
T  21570449 aaacaacgtcacacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaaaaaaaaaaatctagatctatgtgaaaatcacttatttag 21570548  T
Q  216 attgaaata 224  Q
    |||||||||    
T  21570549 attgaaata 21570557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 113 - 185
Target Start/End: Complemental strand, 4228177 - 4228105
Alignment:
Q  113 aaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaaacctcgaagaaaaaa 185  Q
    ||||||||||||||||||||||||| ||||||||| | || ||||| |||| ||| ||| | | |||||||||    
T  4228177 aaatcaaacaacgccgcacaagacgacgaacaacaaaccatcacacttagatgatgaaatcacaaagaaaaaa 4228105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 111 - 203
Target Start/End: Complemental strand, 8308217 - 8308126
Alignment:
Q  111 agaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaaacctcgaagaaaaaatctagatatatgtgaaaa 203  Q
    |||||||||||||||| |||||||||| |||||||||| || |||||   ||| ||  ||| | ||||||||||| |||||| ||||||||||    
T  8308217 agaaatcaaacaacgctgcacaagacgacgaacaacac-gcgccacagtcagatgacgaaatcacgaagaaaaaacctagatctatgtgaaaa 8308126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 102 - 166
Target Start/End: Complemental strand, 37416751 - 37416687
Alignment:
Q  102 aacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacga 166  Q
    ||||| ||| |||||||||||||| ||||||||||| ||||||||||| |||  ||| |||||||    
T  37416751 aacaagatgtgaaatcaaacaacgtcgcacaagacgacgaacaacacaacacggcacttagacga 37416687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 112 - 203
Target Start/End: Complemental strand, 25087082 - 25086991
Alignment:
Q  112 gaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaaacctcgaagaaaaaatctagatatatgtgaaaa 203  Q
    |||| ||||||||| ||||||||||| ||||||||| | |||||||| |||| ||| ||| |   || |||||| |||||| ||||||||||    
T  25087082 gaaagcaaacaacgtcgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcaaaaataaaaaacctagatctatgtgaaaa 25086991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 112 - 163
Target Start/End: Original strand, 31580625 - 31580676
Alignment:
Q  112 gaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctaga 163  Q
    ||||| |||||||||||||||||||| ||||||||| | |||||||| ||||    
T  31580625 gaaataaaacaacgccgcacaagacgacgaacaacaaaccaccacacttaga 31580676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 177 - 228
Target Start/End: Original strand, 31581821 - 31581872
Alignment:
Q  177 aagaaaaaatctagatatatgtgaaaactccttatttagattgaaatagaga 228  Q
    ||||||||| |||||| ||||||||||   ||||||||||||||||||||||    
T  31581821 aagaaaaaaactagatctatgtgaaaatcacttatttagattgaaatagaga 31581872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 71 - 228
Target Start/End: Original strand, 459269 - 459427
Alignment:
Q  71 gatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaa 170  Q
    |||||||||||| ||| ||||| ||||||  ||||| | |  ||||||||||||| || |||||||| |||||| |||| ||| ||||  ||| ||  ||    
T  459269 gatctttcaatatgaatcaaatgaacaccgcaacaagacggaaaatcaaacaacgtcgtacaagacgacgaacagcacaccacgacactcagatgacgaa 459368  T
Q  171 acctcgaag-aaaaaatctagatatatgtgaaaactccttatttagattgaaatagaga 228  Q
    | | ||||| |||||| ||| || ||||||||||   |||||||| | |||||||||||    
T  459369 atcacgaagaaaaaaacctatatctatgtgaaaatcgcttatttaaaatgaaatagaga 459427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 71 - 149
Target Start/End: Original strand, 17249175 - 17249252
Alignment:
Q  71 gatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacaca 149  Q
    |||||||||||| |||||||  |||||||  ||||| |||  |||| |||| ||||||||||||||| |||||||||||    
T  17249175 gatctttcaatatgaaccaac-aaacaccgcaacaagatgccaaataaaactacgccgcacaagacgacgaacaacaca 17249252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 71 - 149
Target Start/End: Original strand, 32448647 - 32448724
Alignment:
Q  71 gatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacaca 149  Q
    |||||||||||| |||||||  || ||||  ||||| |||  ||||||||||||| ||||||||||| |||||||||||    
T  32448647 gatctttcaatatgaaccaacgaa-caccgcaacaagatgccaaatcaaacaacggcgcacaagacgacgaacaacaca 32448724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 29 - 149
Target Start/End: Complemental strand, 36323983 - 36323866
Alignment:
Q  29 cagatctgcaatgttgatgtccaagtcgtttactgaatagaagatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccg 128  Q
    ||||||||||| ||||| ||||||  | || | ||||||  ||||||||||||||||||||||| ||||    ||||| | |||||||||   |||||||    
T  36323983 cagatctgcaacgttgacgtccaaaccattgattgaataacagatctttcaataggaaccaaatgaacatttcaacaagacgagaaatca---aacgccg 36323887  T
Q  129 cacaagacgccgaacaacaca 149  Q
    ||||||||  | |||||||||    
T  36323886 cacaagacaacaaacaacaca 36323866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 122 - 167
Target Start/End: Complemental strand, 18763492 - 18763447
Alignment:
Q  122 aacgccgcacaagacgccgaacaacacagcaccacacctagacgat 167  Q
    |||||||||||||||| ||||||||||| |||| ||| ||||||||    
T  18763492 aacgccgcacaagacgacgaacaacacaacaccgcacttagacgat 18763447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 71 - 149
Target Start/End: Original strand, 10237244 - 10237326
Alignment:
Q  71 gatctttcaataggaaccaaataaacac--caaaacaaaa--tgagaaatcaaacaacgccgcacaagacgccgaacaacaca 149  Q
    |||||||||||| ||||||||  |||||  || |||||||  || ||||||||| ||||| |||||||||| |||||||||||    
T  10237244 gatctttcaatacgaaccaaacgaacactgcacaacaaaagatgcgaaatcaaagaacgctgcacaagacgacgaacaacaca 10237326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 67; Significance: 2e-29; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 46 - 228
Target Start/End: Complemental strand, 34519243 - 34519061
Alignment:
Q  46 tgtccaagtcgtttactgaatagaagatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaa 145  Q
    ||||||| ||||| | ||||||   |||||||||||| ||| ||||| ||||||| || || | |||||||||||||||||||||||| ||| |||||||    
T  34519243 tgtccaaatcgttgattgaataatcgatctttcaatatgaatcaaatgaacaccacaagaagacgagaaatcaaacaacgccgcacaaaacgacgaacaa 34519144  T
Q  146 cacagcaccacacctagacgataaaacctcgaagaaaaaatctagatatatgtgaaaactccttatttagattgaaatagaga 228  Q
    || | |||||||| |||| ||| ||| |   ||||||||| |||||| ||||||||||   ||||||||||||||||||||||    
T  34519143 caaaccaccacacttagatgatgaaatcaaaaagaaaaaacctagatctatgtgaaaatcacttatttagattgaaatagaga 34519061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 31 - 228
Target Start/End: Complemental strand, 28035265 - 28035067
Alignment:
Q  31 gatctgcaatgttgatgtccaagtcgtttactgaatagaagatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgca 130  Q
    ||||||||||||||| | |||| || || | ||||||   |||||||||||| ||| ||||| ||||||  |  || | | |||||||||||||||||||    
T  28035265 gatctgcaatgttgacgcccaaatctttgattgaataatcgatctttcaatatgaatcaaatgaacaccgtacgaagacgggaaatcaaacaacgccgca 28035166  T
Q  131 caagacgccgaacaacacagcaccacacctagacgataaaacctcgaag-aaaaaatctagatatatgtgaaaactccttatttagattgaaatagaga 228  Q
    ||||||| ||||||||| | |||||||| |||| ||| ||| | | ||| |||||| |||||| ||||||||||   ||||||||||||||||||||||    
T  28035165 caagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaaaaaaacctagatctatgtgaaaatcacttatttagattgaaatagaga 28035067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 28 - 228
Target Start/End: Original strand, 51868597 - 51868798
Alignment:
Q  28 ccagatctgcaatgttgatgtccaagtcgtttactgaatagaagatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgcc 127  Q
    |||||||||||| ||||| |||||| || || | ||||||   |||||||||||| |||  |||| ||||||  || || | |||||| |||||||||||    
T  51868597 ccagatctgcaacgttgacgtccaaatctttgattgaataatcgatctttcaataagaataaaatgaacaccgcaagaagacgagaaagcaaacaacgcc 51868696  T
Q  128 gcacaagacgccgaacaacacagcaccacacctagacgataaaacctcgaag-aaaaaatctagatatatgtgaaaactccttatttagattgaaataga 226  Q
    |||||||||| ||||||||| | |||||||| |||| ||| ||| | | ||| |||||| |||||| |||||||||    ||||||||||||||||||||    
T  51868697 gcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaaaaaaacctagatctatgtgaaagtcacttatttagattgaaataga 51868796  T
Q  227 ga 228  Q
    ||    
T  51868797 ga 51868798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 112 - 228
Target Start/End: Complemental strand, 11453980 - 11453864
Alignment:
Q  112 gaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaaacctcgaagaaaaaatctagatatatgtgaaaactccttat 211  Q
    ||||||||||| ||| |||||||||| ||||||||| | |||||||| |||| ||| ||| | | ||||||||| |||||| |||||||||||  |||||    
T  11453980 gaaatcaaacagcgctgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaaaaaacctagatctatgtgaaaaccacttat 11453881  T
Q  212 ttagattgaaatagaga 228  Q
    |||||||||||||||||    
T  11453880 ttagattgaaatagaga 11453864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 71 - 226
Target Start/End: Original strand, 39927549 - 39927705
Alignment:
Q  71 gatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaa 170  Q
    |||||||||||| ||| ||||| ||||||  ||||| | | |||||||||||||||| ||||||||| ||||||||||| ||||||||   || ||  ||    
T  39927549 gatctttcaatatgaaacaaatgaacaccgcaacaagacgggaaatcaaacaacgccacacaagacgacgaacaacacaccaccacactcggatgacgaa 39927648  T
Q  171 acctcgaag-aaaaaatctagatatatgtgaaaactccttatttagattgaaataga 226  Q
    | | ||||| ||||||||||||| ||| |||||| |  |||||||||||||||||||    
T  39927649 atcacgaagaaaaaaatctagatctatctgaaaattatttatttagattgaaataga 39927705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 31 - 228
Target Start/End: Complemental strand, 9172616 - 9172416
Alignment:
Q  31 gatctgcaatgttgatgtccaagtcgtttactgaatagaagatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgca 130  Q
    ||||||||| ||||| |||||| || || | ||||||   ||||||||||||||||  |||| ||||||  || || | | |||| ||||||||||||||    
T  9172616 gatctgcaacgttgacgtccaaatctttgattgaataatcgatctttcaataggaataaaatgaacaccgcaagaagacgggaaagcaaacaacgccgca 9172517  T
Q  131 caagacgccgaacaacacagcaccacacctagacgataaaa--cctcgaag-aaaaaatctagatatatgtgaaaactccttatttagattgaaatagag 227  Q
    ||||||| ||||||||| | |||||||| |||| |||||||   | | ||| |||||| |||||| |||||||||    |||||||||||||||||||||    
T  9172516 caagacgacgaacaacaaaccaccacacttagatgataaaatcacacaaagaaaaaaacctagatctatgtgaaagtcacttatttagattgaaatagag 9172417  T
Q  228 a 228  Q
    |    
T  9172416 a 9172416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 31 - 228
Target Start/End: Complemental strand, 9180598 - 9180398
Alignment:
Q  31 gatctgcaatgttgatgtccaagtcgtttactgaatagaagatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgca 130  Q
    ||||||||| ||||| |||||| || || | ||||||   ||||||||||||||||  |||| ||||||  || || | | |||| ||||||||||||||    
T  9180598 gatctgcaacgttgacgtccaaatctttgattgaataatcgatctttcaataggaataaaatgaacaccgcaagaagacgggaaagcaaacaacgccgca 9180499  T
Q  131 caagacgccgaacaacacagcaccacacctagacgataaaa--cctcgaag-aaaaaatctagatatatgtgaaaactccttatttagattgaaatagag 227  Q
    ||||||| ||||||||| | |||||||| |||| |||||||   | | ||| |||||| |||||| |||||||||    |||||||||||||||||||||    
T  9180498 caagacgacgaacaacaaaccaccacacttagatgataaaatcacacaaagaaaaaaacctagatctatgtgaaagtcacttatttagattgaaatagag 9180399  T
Q  228 a 228  Q
    |    
T  9180398 a 9180398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 112 - 228
Target Start/End: Complemental strand, 3871453 - 3871337
Alignment:
Q  112 gaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaaacctcgaagaaaaaatctagatatatgtgaaaactccttat 211  Q
    ||||||||||||||| |||||||||| ||||||||| | |||||||| |||| ||| ||| | | |||||||||  ||||| ||||||||||   |||||    
T  3871453 gaaatcaaacaacgctgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaaaaaacttagatctatgtgaaaatcacttat 3871354  T
Q  212 ttagattgaaatagaga 228  Q
    |||||||||||| ||||    
T  3871353 ttagattgaaattgaga 3871337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 117 - 228
Target Start/End: Complemental strand, 51871903 - 51871792
Alignment:
Q  117 caaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaaacctcgaagaaaaaatctagatatatgtgaaaactccttatttaga 216  Q
    ||||||||| ||||||||||| ||||||||| | |||||||| |||| ||| ||| | | ||||||||| |||||| |||||||||    ||||||||||    
T  51871903 caaacaacgtcgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaaaaaagctagatctatgtgaaagtcacttatttaga 51871804  T
Q  217 ttgaaatagaga 228  Q
    ||||||||||||    
T  51871803 ttgaaatagaga 51871792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 71 - 149
Target Start/End: Complemental strand, 12635235 - 12635157
Alignment:
Q  71 gatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacaca 149  Q
    |||||||||||| ||||||||| |||||||  |||||| |  ||||||||||||||||||||||||| |||||||||||    
T  12635235 gatctttcaatatgaaccaaatgaacaccactacaaaacgtaaaatcaaacaacgccgcacaagacgacgaacaacaca 12635157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 114 - 224
Target Start/End: Complemental strand, 14545562 - 14545452
Alignment:
Q  114 aatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaaacctcgaagaaaaaatctagatatatgtgaaaactccttattt 213  Q
    ||||||||| || ||||||||||| ||||||||| | |||||||| |||| ||| ||| | | ||||||||| |||||| ||||||||||   |||||||    
T  14545562 aatcaaacagcgtcgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaaaaaacctagatctatgtgaaaatcacttattt 14545463  T
Q  214 agattgaaata 224  Q
    |||||||||||    
T  14545462 agattgaaata 14545452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 113 - 227
Target Start/End: Complemental strand, 27872782 - 27872668
Alignment:
Q  113 aaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaaacctcgaagaaaaaatctagatatatgtgaaaactccttatt 212  Q
    ||||||||||||| || |||||||| ||||||||| | |||||||| |||| |||  || | |||||||||||  ||||| ||||||||||   ||||||    
T  27872782 aaatcaaacaacgtcgaacaagacgacgaacaacaaaccaccacacttagatgatgcaatcacgaagaaaaaacttagatctatgtgaaaatcacttatt 27872683  T
Q  213 tagattgaaatagag 227  Q
    |||||||||||||||    
T  27872682 tagattgaaatagag 27872668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 39987545 - 39987325
Alignment:
Q  1 attaaagtgacatgaatgctcatgccaccagatctgcaatgttgatgtccaagtcgtttactgaatagaagatctttcaataggaaccaaataaacacca 100  Q
    |||||||||||  |||| | |||||| || ||||||||| ||||| | |||| || || | ||||||   |||||||||||| ||| ||||| ||||||     
T  39987545 attaaagtgaccggaatacccatgcctccggatctgcaacgttgacgcccaattctttgattgaataatcgatctttcaatatgaatcaaatgaacaccg 39987446  T
Q  101 aaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaaacctcgaagaaaaaatctagatatatgtga 200  Q
     | ||| | |  ||||||||||||||||||||||||| ||||||| ||| ||||||||   || | | ||| | ||||||||||| |||||| ||| |||    
T  39987445 cagcaatacggaaaatcaaacaacgccgcacaagacgacgaacaatacaccaccacactcggatggtgaaatcacgaagaaaaaa-ctagatctatatga 39987347  T
Q  201 aaactc-cttatttagattgaa 221  Q
    ||| || |||||||||||||||    
T  39987346 aaaatcacttatttagattgaa 39987325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 112 - 224
Target Start/End: Original strand, 50272176 - 50272289
Alignment:
Q  112 gaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaaacctcgaagaaaaaatc-tagatatatgtgaaaactcctta 210  Q
    |||||||||||||||||||||| ||| ||||||||| | ||||| || |||| ||| ||| | | ||||||||| | ||||| |||||||||| | ||||    
T  50272176 gaaatcaaacaacgccgcacaaaacgacgaacaacaaatcaccaaacttagaagatgaaatcacaaagaaaaaaacttagatctatgtgaaaattactta 50272275  T
Q  211 tttagattgaaata 224  Q
    ||||||||||||||    
T  50272276 tttagattgaaata 50272289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 112 - 228
Target Start/End: Original strand, 40881048 - 40881166
Alignment:
Q  112 gaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaaacctc--gaagaaaaaatctagatatatgtgaaaactcctt 209  Q
    |||||||||||||||||||||||||| ||||||||| | |||||||| |||| ||| ||| |||   || |||||| |||||| || |||||||   ||     
T  40881048 gaaatcaaacaacgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatctcaaaaaaaaaaaacctagatctaagtgaaaatcactc 40881147  T
Q  210 atttagattgaaatagaga 228  Q
    |||||||||||||||||||    
T  40881148 atttagattgaaatagaga 40881166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 71 - 228
Target Start/End: Complemental strand, 9919475 - 9919317
Alignment:
Q  71 gatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaa 170  Q
    ||||||||||||||||  |||| ||||||  || || | | |||| |||||||||||| |||||||| ||||||||| | |||||||| |||| | | ||    
T  9919475 gatctttcaataggaataaaatgaacaccgcaagaagacgggaaagcaaacaacgccgtacaagacgacgaacaacaaaccaccacacttagatggtgaa 9919376  T
Q  171 acctcgaagaaaaaatc-tagatatatgtgaaaactccttatttagattgaaatagaga 228  Q
    | | | ||||||||| | ||||| ||||| ||||   ||||||||||||||||||||||    
T  9919375 atcacaaagaaaaaaacatagatctatgtaaaaatcacttatttagattgaaatagaga 9919317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 113 - 226
Target Start/End: Original strand, 33291455 - 33291569
Alignment:
Q  113 aaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaaacctcgaagaaaaaatc-tagatatatgtgaaaactccttat 211  Q
    |||||||||||| |||||||||||| ||||||||| | |||||||| |||| ||| ||| | | ||||||||| | ||||| ||||||||||   |||||    
T  33291455 aaatcaaacaacaccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaaaaaaacatagatttatgtgaaaatcacttat 33291554  T
Q  212 ttagattgaaataga 226  Q
    ||| |||||||||||    
T  33291555 ttatattgaaataga 33291569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 71 - 149
Target Start/End: Complemental strand, 34528795 - 34528717
Alignment:
Q  71 gatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacaca 149  Q
    ||||||||||||  ||||||| ||||||| |||||| ||| ||||||||||||| |||| ||||||| |||||||||||    
T  34528795 gatctttcaatataaaccaaagaaacaccgaaacaagatgcgaaatcaaacaacaccgcgcaagacgacgaacaacaca 34528717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 31 - 226
Target Start/End: Complemental strand, 7342848 - 7342652
Alignment:
Q  31 gatctgcaatgttgatgtccaagtcgtttactgaatagaagatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgca 130  Q
    ||||||||| ||||| |||||| || || | ||||||   ||||||||||||||||  |||| |||| |  || || | | |||| ||||||||||||||    
T  7342848 gatctgcaacgttgacgtccaaatctttgattgaataatcgatctttcaataggaataaaatgaacaacgcaagaagacgggaaaacaaacaacgccgca 7342749  T
Q  131 caagacgccgaacaacacagcaccacacctagacgataaaacctcgaagaaaaaatc-tagatatatgtgaaaactc-cttatttagattgaaataga 226  Q
    ||||||| ||||||||| | |||||||| |||| ||| ||| | | ||||||||| | ||||| || || |||| || ||||||||||||||||||||    
T  7342748 caagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaaaaaaacatagatctacgt-aaaagtcacttatttagattgaaataga 7342652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 113 - 221
Target Start/End: Complemental strand, 19723377 - 19723268
Alignment:
Q  113 aaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaaacctcgaag-aaaaaatctagatatatgtgaaaactccttat 211  Q
    |||||||||||||||||| |||||| ||||||||| | |||||||| |||| ||| ||| | | ||| |||||| |||||| ||||||||||   |||||    
T  19723377 aaatcaaacaacgccgcagaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaaaaaaacctagatctatgtgaaaatcacttat 19723278  T
Q  212 ttagattgaa 221  Q
    ||||||||||    
T  19723277 ttagattgaa 19723268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 71 - 163
Target Start/End: Original strand, 9687199 - 9687291
Alignment:
Q  71 gatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctaga 163  Q
    |||||||||||| ||| ||||| ||||||  || || ||| |||||||||||||||||||||||| | ||||||||| | |||||||| ||||    
T  9687199 gatctttcaatatgaatcaaatgaacaccgcaagaagatgggaaatcaaacaacgccgcacaagatgacgaacaacaaaccaccacacttaga 9687291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 71 - 226
Target Start/End: Original strand, 50166094 - 50166250
Alignment:
Q  71 gatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaa 170  Q
    ||||||||||||||||  |||| ||||||  || || | |||||| |||| |||||||||||||||| ||||||||| | |||||||| |||| ||| ||    
T  50166094 gatctttcaataggaataaaatgaacaccgcaagaagacgagaaagcaaataacgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaa 50166193  T
Q  171 acctcgaag-aaaaaatctagatatatgtgaaaactccttatttagattgaaataga 226  Q
    | | |  || |||||| ||| || |||||||||    ||||||||||||||||||||    
T  50166194 atcacatagaaaaaaacctaaatctatgtgaaattcacttatttagattgaaataga 50166250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 129 - 228
Target Start/End: Original strand, 30818399 - 30818498
Alignment:
Q  129 cacaagacgccgaacaacacagcaccacacctagacgataaaacctcgaagaaaaaatctagatatatgtgaaaactccttatttagattgaaatagaga 228  Q
    ||||||||| ||||||||| | |||||||| |||| ||| ||| | | || |||||| |||||| ||||||||||   ||||||||||||||||||||||    
T  30818399 cacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaaaaaaaaaactagatttatgtgaaaatcacttatttagattgaaatagaga 30818498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 71 - 228
Target Start/End: Original strand, 25406279 - 25406437
Alignment:
Q  71 gatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaa 170  Q
    ||||||||||||||||  |||| ||||||  || || | | |||| ||||||||||| ||||||||| ||||||| | | |||||||| |||| ||  ||    
T  25406279 gatctttcaataggaataaaatgaacaccgcaagaagacgggaaagcaaacaacgccacacaagacgacgaacaataaaccaccacacttagatgacgaa 25406378  T
Q  171 acctcgaag-aaaaaatctagatatatgtgaaaactccttatttagattgaaatagaga 228  Q
    | | | ||| |||||| |||||| |||||||||    ||||||||||||||||||||||    
T  25406379 atcacaaagaaaaaaacctagatctatgtgaaagtcacttatttagattgaaatagaga 25406437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 113 - 224
Target Start/End: Original strand, 35584655 - 35584770
Alignment:
Q  113 aaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaaacctcgaag----aaaaaatctagatatatgtgaaaactcct 208  Q
    ||||||||||||||||||||||||| ||||||||| | |||||||| ||||  ||||||   | |||    |||||| |||||| ||||||||||   ||    
T  35584655 aaatcaaacaacgccgcacaagacgacgaacaacaaatcaccacacttagattataaaattacaaagaaaaaaaaaacctagatctatgtgaaaatcact 35584754  T
Q  209 tatttagattgaaata 224  Q
    ||||||||||||||||    
T  35584755 tatttagattgaaata 35584770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 71 - 228
Target Start/End: Original strand, 38520526 - 38520686
Alignment:
Q  71 gatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccga---acaacacagcaccacacctagacgat 167  Q
    |||||||||||| ||| || || ||||||  || || | | |||||||||||||||| ||||||||| |||   |||||| | |||||| | |||| |||    
T  38520526 gatctttcaatatgaatcagatgaacaccgtaagaatacgggaaatcaaacaacgccacacaagacgacgacgaacaacaaaccaccactcttagatgat 38520625  T
Q  168 aaaacctcgaagaaaaaatctagatatatgtgaaaactccttatttagattgaaatagaga 228  Q
     ||| | |||||||||||  ||||| ||||||||||   ||||||||||| ||||||||||    
T  38520626 gaaatcacgaagaaaaaacatagatctatgtgaaaatcacttatttagatcgaaatagaga 38520686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 71 - 229
Target Start/End: Complemental strand, 44637507 - 44637349
Alignment:
Q  71 gatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaa 170  Q
    |||||||||||| ||| ||||| ||||||  ||||| | | |||| ||||||||| ||||||||||  ||||||||||| |||||||  |||| ||  ||    
T  44637507 gatctttcaatatgaatcaaatgaacaccgtaacaagacgggaaaccaaacaacgtcgcacaagactacgaacaacacatcaccacatttagatgacgaa 44637408  T
Q  171 acctcgaagaaaaaatctagatatatgtgaaaactccttatttagattgaaatagagat 229  Q
    | | | ||||| |||  ||||| || |||||||   |||||||||||||||||| ||||    
T  44637407 atcacaaagaagaaacttagatctacgtgaaaatcacttatttagattgaaataaagat 44637349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 112 - 228
Target Start/End: Original strand, 45426102 - 45426215
Alignment:
Q  112 gaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaaacctcgaagaaaaaatctagatatatgtgaaaactccttat 211  Q
    |||||||||||||||||||||||||| ||||||||| | |||||||| |||| ||| ||| |   |  ||||||  ||||| ||||||||||   |||||    
T  45426102 gaaatcaaacaacgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatc---acaaaaaaacttagatctatgtgaaaatcacttat 45426198  T
Q  212 ttagattgaaatagaga 228  Q
    ||||||| |||||||||    
T  45426199 ttagatttaaatagaga 45426215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 75 - 228
Target Start/End: Original strand, 5324557 - 5324710
Alignment:
Q  75 tttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaaacct 174  Q
    |||||||| ||| ||||| ||||||  || || | | ||||||||||||  |||||||||||| ||||||||| | |||||||| |||| ||| ||| |     
T  5324557 tttcaatatgaatcaaatgaacaccgcaaaaagacgggaaatcaaacaataccgcacaagacggcgaacaacaaaccaccacacttagatgatgaaatca 5324656  T
Q  175 cgaagaaaaaatctagatatatgtgaaaactccttatttagattgaaatagaga 228  Q
    | ||| |||||  || || || |||||||   ||||||||||||||||||||||    
T  5324657 caaaggaaaaacttaaatttacgtgaaaatcacttatttagattgaaatagaga 5324710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 112 - 224
Target Start/End: Complemental strand, 5701304 - 5701189
Alignment:
Q  112 gaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaa---acctcgaagaaaaaatctagatatatgtgaaaactcct 208  Q
    |||||||||||||||||||||||||| ||||||||| | |||||||| |||| ||| ||   ||   ||| |||||| |||||| ||||||||||   ||    
T  5701304 gaaatcaaacaacgccgcacaagacgacgaacaacaaatcaccacacttagatgatgaaattacaaagaaaaaaaaacctagatctatgtgaaaatcact 5701205  T
Q  209 tatttagattgaaata 224  Q
    |||||| |||||||||    
T  5701204 tatttaaattgaaata 5701189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 112 - 224
Target Start/End: Complemental strand, 7997834 - 7997719
Alignment:
Q  112 gaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaa---acctcgaagaaaaaatctagatatatgtgaaaactcct 208  Q
    |||||||||||||||||||||||||| ||||||||| | |||||||| |||| ||| ||   ||   ||| |||||| |||||| ||||||||||   ||    
T  7997834 gaaatcaaacaacgccgcacaagacgacgaacaacaaatcaccacacttagatgatgaaattacaaagaaaaaaaaacctagatctatgtgaaaatcact 7997735  T
Q  209 tatttagattgaaata 224  Q
    |||||| |||||||||    
T  7997734 tatttatattgaaata 7997719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 71 - 149
Target Start/End: Complemental strand, 16161903 - 16161821
Alignment:
Q  71 gatctttcaataggaaccaaataaacacc--aaaacaaaa--tgagaaatcaaacaacgccgcacaagacgccgaacaacaca 149  Q
    |||||||||||| ||||||||  ||||||  | |||||||  || |||||||||||||||||||||||||| |||||||||||    
T  16161903 gatctttcaatacgaaccaaacgaacaccgcacaacaaaagatgtgaaatcaaacaacgccgcacaagacgacgaacaacaca 16161821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 71 - 149
Target Start/End: Complemental strand, 41994492 - 41994414
Alignment:
Q  71 gatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacaca 149  Q
    |||||||||||| |||| |||  ||||||| ||||| ||  ||||||||||||||| ||||||||||  ||||||||||    
T  41994492 gatctttcaatatgaacgaaacgaacaccacaacaagatccgaaatcaaacaacgctgcacaagacgatgaacaacaca 41994414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 71 - 149
Target Start/End: Complemental strand, 49626978 - 49626901
Alignment:
Q  71 gatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacaca 149  Q
    |||||||||||| |||||||  || ||||  ||||| |||  ||||||||||||||||||||||||| |||||||||||    
T  49626978 gatctttcaatatgaaccaacgaa-caccgcaacaagatgtcaaatcaaacaacgccgcacaagacgacgaacaacaca 49626901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 112 - 224
Target Start/End: Complemental strand, 20266347 - 20266234
Alignment:
Q  112 gaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaaacctcgaagaaaaaat-ctagatatatgtgaaaactcctta 210  Q
    ||||||||||||  || ||||||||| ||||||||| | |||||||| |||| ||| |||   | |||||||||  |||||| ||||||||||   ||||    
T  20266347 gaaatcaaacaattccacacaagacgacgaacaacaaatcaccacacttagatgatgaaattacaaagaaaaaaagctagatctatgtgaaaatcactta 20266248  T
Q  211 tttagattgaaata 224  Q
    ||||||||||||||    
T  20266247 tttagattgaaata 20266234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 112 - 149
Target Start/End: Original strand, 34413162 - 34413199
Alignment:
Q  112 gaaatcaaacaacgccgcacaagacgccgaacaacaca 149  Q
    |||||||||||||||||||||||||| |||||||||||    
T  34413162 gaaatcaaacaacgccgcacaagacgacgaacaacaca 34413199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 112 - 217
Target Start/End: Complemental strand, 31836852 - 31836745
Alignment:
Q  112 gaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaaacctcgaag--aaaaaatctagatatatgtgaaaactcctt 209  Q
    ||||||||||||| |||||||||||| ||||||||| | |||||||| |||| ||| |||   | |||  |||||| |||||| ||||||||||   |||    
T  31836852 gaaatcaaacaacaccgcacaagacgacgaacaacaaatcaccacacttagatgatgaaattacaaagaaaaaaaacctagatctatgtgaaaatcactt 31836753  T
Q  210 atttagat 217  Q
    ||||||||    
T  31836752 atttagat 31836745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 71 - 149
Target Start/End: Complemental strand, 47132968 - 47132890
Alignment:
Q  71 gatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacaca 149  Q
    |||||||||||| ||| ||||  ||||||  ||||| | | ||||| |||||||||||||||| ||| |||||||||||    
T  47132968 gatctttcaatatgaagcaaacgaacaccgcaacaagacgcgaaattaaacaacgccgcacaaaacgacgaacaacaca 47132890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 149
Target Start/End: Complemental strand, 48750205 - 48750168
Alignment:
Q  112 gaaatcaaacaacgccgcacaagacgccgaacaacaca 149  Q
    |||||||||||||| ||||||||||| |||||||||||    
T  48750205 gaaatcaaacaacgtcgcacaagacgacgaacaacaca 48750168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 71 - 149
Target Start/End: Complemental strand, 3228334 - 3228259
Alignment:
Q  71 gatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacaca 149  Q
    ||||||||||||||||| ||| |||||||   |||| ||| |||||||   || ||||||||||||| |||||||||||    
T  3228334 gatctttcaataggaactaaacaaacaccgcgacaagatgcgaaatca---aatgccgcacaagacgacgaacaacaca 3228259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 113 - 149
Target Start/End: Complemental strand, 19060933 - 19060897
Alignment:
Q  113 aaatcaaacaacgccgcacaagacgccgaacaacaca 149  Q
    ||||||||||||||| ||||||||| |||||||||||    
T  19060933 aaatcaaacaacgccacacaagacgacgaacaacaca 19060897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 71 - 171
Target Start/End: Original strand, 33817176 - 33817275
Alignment:
Q  71 gatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaa 170  Q
    |||||||||||| ||| ||||| |||||| ||| || | ||||||||||||||||| ||| |||||| | ||||| | | |||||||| || | ||||||    
T  33817176 gatctttcaatatgaatcaaatgaacaccgaaa-aagacgagaaatcaaacaacgcagcataagacgacaaacaataaaccaccacacttaaatgataaa 33817274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 66; Significance: 6e-29; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 71 - 228
Target Start/End: Original strand, 23947313 - 23947470
Alignment:
Q  71 gatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaa 170  Q
    |||||||||||| ||| ||||| ||||||  || || ||| |||||||||||||||||||||||||| ||||||||| | |||||||| |||| ||| ||    
T  23947313 gatctttcaatatgaatcaaatgaacaccgcaaaaagatgggaaatcaaacaacgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaa 23947412  T
Q  171 acctcgaagaaaaaatctagatatatgtgaaaactccttatttagattgaaatagaga 228  Q
    | |   ||||||||| |||||| ||||||||||   ||||||||||||||||||||||    
T  23947413 atcaaaaagaaaaaacctagatctatgtgaaaatcacttatttagattgaaatagaga 23947470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 112 - 225
Target Start/End: Complemental strand, 12165881 - 12165768
Alignment:
Q  112 gaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaaacctcgaagaaaaaatctagatatatgtgaaaactccttat 211  Q
    |||||| ||||||||||||||||||| ||||||||| | |||||||| |||| ||||||||| | ||||||||| ||| || ||||||||||   |||||    
T  12165881 gaaatcgaacaacgccgcacaagacgacgaacaacaaaccaccacacttagatgataaaaccacaaagaaaaaacctaaatctatgtgaaaatcacttat 12165782  T
Q  212 ttagattgaaatag 225  Q
    ||||||||||||||    
T  12165781 ttagattgaaatag 12165768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 76 - 203
Target Start/End: Complemental strand, 34489327 - 34489200
Alignment:
Q  76 ttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaaacctc 175  Q
    ||||||| ||| ||||| ||||||| ||||| ||| |||||||||||||| ||||||||||| ||||||||||| ||||||||   || ||| ||| | |    
T  34489327 ttcaatatgaatcaaatgaacaccacaacaatatgggaaatcaaacaacgtcgcacaagacgacgaacaacacaccaccacactcggatgatgaaatcac 34489228  T
Q  176 gaagaaaaaatctagatatatgtgaaaa 203  Q
    |||||||||| |||||| ||||||||||    
T  34489227 gaagaaaaaacctagatctatgtgaaaa 34489200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 112 - 228
Target Start/End: Original strand, 8196443 - 8196560
Alignment:
Q  112 gaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaaacctcgaag-aaaaaatctagatatatgtgaaaactcctta 210  Q
    |||||||||||||||||||||||||| ||||||||| | |||||||| || | ||| ||| | | ||| |||||| |||||| ||||||||||   ||||    
T  8196443 gaaatcaaacaacgccgcacaagacgacgaacaacaaaccaccacacttatatgatgaaatcacaaagaaaaaaacctagatctatgtgaaaatcactta 8196542  T
Q  211 tttagattgaaatagaga 228  Q
    ||||||||||||||||||    
T  8196543 tttagattgaaatagaga 8196560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 28 - 228
Target Start/End: Complemental strand, 12653069 - 12652864
Alignment:
Q  28 ccagatctgcaatgttgatgtccaagtcgtttactgaatagaagatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgcc 127  Q
    |||||||||||| ||||| | |||| || || | ||||||   |||||||||||| ||| ||||| ||||||  |  || |||  |||||||||||||||    
T  12653069 ccagatctgcaacgttgacggccaaatctttgattgaataatcgatctttcaatatgaatcaaatgaacaccgcacgaagatggaaaatcaaacaacgcc 12652970  T
Q  128 gcacaagacgccgaacaacacagcaccacacctagacgataaaacctcgaag-----aaaaaatctagatatatgtgaaaactccttatttagattgaaa 222  Q
    ||||||||||  |||||||| | |||||||| |||| ||| ||| | | |||     ||||||||||||| ||||||||||   ||||||||||||||||    
T  12652969 gcacaagacgatgaacaacaaaccaccacacttagatgatgaaatcacaaaggaaaaaaaaaatctagatctatgtgaaaatcacttatttagattgaaa 12652870  T
Q  223 tagaga 228  Q
    ||||||    
T  12652869 tagaga 12652864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 71 - 224
Target Start/End: Complemental strand, 25064318 - 25064163
Alignment:
Q  71 gatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaa 170  Q
    |||||||||||| ||| ||||| ||||||  |  |||| | |||||||||||||||||||||||||| ||||||||| | |||||||| |||| ||| ||    
T  25064318 gatctttcaatatgaatcaaatgaacaccgcacgaaaacgggaaatcaaacaacgccgcacaagacgacgaacaacaaatcaccacacttagatgatgaa 25064219  T
Q  171 acctcgaag--aaaaaatctagatatatgtgaaaactccttatttagattgaaata 224  Q
    |   | |||  |||||| |||||| ||||||||||   ||||||||||||||||||    
T  25064218 attacaaagaaaaaaaacctagatctatgtgaaaatcacttatttagattgaaata 25064163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 31 - 228
Target Start/End: Complemental strand, 35001712 - 35001514
Alignment:
Q  31 gatctgcaatgttgatgtccaagtcgtttactgaatagaagatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgca 130  Q
    ||||||||| ||||| |||||| || || | ||||||   ||||||||||||||||  |||| ||||||  || || | | |||| ||||||||||||||    
T  35001712 gatctgcaacgttgacgtccaaatctttgattgaataattgatctttcaataggaataaaatgaacaccgcaagaagacgggaaagcaaacaacgccgca 35001613  T
Q  131 caagacgccgaacaacacagcaccacacctagacgataaaacctcgaagaaaaaatc-tagatatatgtgaaaactc-cttatttagattgaaatagaga 228  Q
    ||||||| ||||||||| | |||||||| |||| ||| ||| | | ||||||||| | ||||| ||||| |||| || |||||||||||| |||||||||    
T  35001612 caagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaaaaaaacatagatctatgt-aaaagtcacttatttagattaaaatagaga 35001514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 113 - 224
Target Start/End: Original strand, 7881139 - 7881252
Alignment:
Q  113 aaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaaacctcgaag--aaaaaatctagatatatgtgaaaactcctta 210  Q
    ||||||||||||||||||||||||| ||||||||| | |||||||| |||| ||| |||   | |||  ||||||||||||| ||||||||||   ||||    
T  7881139 aaatcaaacaacgccgcacaagacgacgaacaacaaatcaccacacttagatgatgaaattgcaaagaaaaaaaatctagatctatgtgaaaatcactta 7881238  T
Q  211 tttagattgaaata 224  Q
    ||||||||||||||    
T  7881239 tttagattgaaata 7881252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 112 - 228
Target Start/End: Original strand, 8028154 - 8028271
Alignment:
Q  112 gaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaaacctcgaagaaaaaatc-tagatatatgtgaaaactcctta 210  Q
    |||||||||||||||||||||||||| ||||||||| | |||||||| |||| ||| ||| |   ||||||||| | ||||| ||||||||||   ||||    
T  8028154 gaaatcaaacaacgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcataaagaaaaaaacttagatctatgtgaaaatcactta 8028253  T
Q  211 tttagattgaaatagaga 228  Q
    |||||||||||| |||||    
T  8028254 tttagattgaaacagaga 8028271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 112 - 224
Target Start/End: Original strand, 17237321 - 17237433
Alignment:
Q  112 gaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaaacctcgaagaaaaaatctagatatatgtgaaaactccttat 211  Q
    |||||| |||| |||||||||||||| ||||||||| | |||||||| |||| | | ||| | | ||||||||| |||||| ||||||||||   |||||    
T  17237321 gaaatccaacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgctgaaatcacaaagaaaaaacctagatctatgtgaaaataacttat 17237420  T
Q  212 ttagattgaaata 224  Q
    |||||||||||||    
T  17237421 ttagattgaaata 17237433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 113 - 228
Target Start/End: Complemental strand, 4468598 - 4468483
Alignment:
Q  113 aaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaaacctcgaagaaaaaatctagatatatgtgaaaactccttatt 212  Q
    |||||||||||||| |||||||||| |||| |||| | |||||||| || | ||| ||| | | ||||||||| |||||| ||| ||||||   ||||||    
T  4468598 aaatcaaacaacgctgcacaagacgacgaataacaaaccaccacacttatatgatgaaatcacaaagaaaaaacctagatctatatgaaaatcacttatt 4468499  T
Q  213 tagattgaaatagaga 228  Q
    ||||||||||||||||    
T  4468498 tagattgaaatagaga 4468483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 71 - 154
Target Start/End: Complemental strand, 30493595 - 30493512
Alignment:
Q  71 gatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacacagcacc 154  Q
    |||||||||||| ||||||||  ||||||| ||||| ||  ||||||||||||||| |||||||||| ||||||||||| ||||    
T  30493595 gatctttcaatatgaaccaaacgaacaccagaacaagatacgaaatcaaacaacgctgcacaagacgacgaacaacacaacacc 30493512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 112 - 229
Target Start/End: Complemental strand, 4088501 - 4088383
Alignment:
Q  112 gaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaaacctcgaag-aaaaaatctagatatatgtgaaaactcctta 210  Q
    ||||||||||||||||||||||||||  |||||||| | |||||||| |||| ||| ||| |   ||| |||||| |||||| ||||||||||   ||||    
T  4088501 gaaatcaaacaacgccgcacaagacgatgaacaacaaaccaccacacttagatgatgaaatcaaaaagaaaaaaaactagatctatgtgaaaatcactta 4088402  T
Q  211 tttagattgaaatagagat 229  Q
    ||||||||| |||||||||    
T  4088401 tttagattgtaatagagat 4088383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 113 - 224
Target Start/End: Original strand, 7876081 - 7876194
Alignment:
Q  113 aaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaaacctcgaag--aaaaaatctagatatatgtgaaaactcctta 210  Q
    ||||||||||||| ||||||||||| ||||||||| | |||||||| |||| ||| |||   | |||  ||||||||||||| ||||||||||   ||||    
T  7876081 aaatcaaacaacgtcgcacaagacgacgaacaacaaatcaccacacttagatgatgaaattgcaaagaaaaaaaatctagatctatgtgaaaatcactta 7876180  T
Q  211 tttagattgaaata 224  Q
    ||||||||||||||    
T  7876181 tttagattgaaata 7876194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 31 - 228
Target Start/End: Complemental strand, 16419280 - 16419082
Alignment:
Q  31 gatctgcaatgttgatgtccaagtcgtttactgaatagaagatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgca 130  Q
    ||||||||| ||||| |||||| || || | ||||||   ||| |||||||| |||  |||| ||||||  || || | | |||| ||||||||||||||    
T  16419280 gatctgcaacgttgacgtccaaatctttgattgaataatcgatttttcaatatgaataaaatgaacaccgcaagaagacgggaaagcaaacaacgccgca 16419181  T
Q  131 caagacgccgaacaacacagcaccacacctagacgataaaacctcgaagaaaaaatc-tagatatatgtgaaaactccttatttagattgaaatagaga 228  Q
    ||||||| ||||||||| | |||||||| |||| ||| ||| | | ||||||||| |  |||| |||||||||    ||||||||||||||||||||||    
T  16419180 caagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaaaaaaacaaagatctatgtgaaagtcacttatttagattgaaatagaga 16419082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 71 - 223
Target Start/End: Complemental strand, 25337652 - 25337499
Alignment:
Q  71 gatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaa 170  Q
    |||||||||||| ||| ||||| ||||||  ||||| | || |||||||||||| |||| ||||||| ||||||||||| ||||||||   || ||  ||    
T  25337652 gatctttcaatatgaatcaaatgaacaccgcaacaagacgaaaaatcaaacaacaccgcgcaagacgacgaacaacacaccaccacactcggatgacgaa 25337553  T
Q  171 acctcgaag-aaaaaatctagatatatgtgaaaactccttatttagattgaaat 223  Q
    | | ||||| |||||| |||||| ||||||||||    ||||||||||||||||    
T  25337552 atcacgaagaaaaaaacctagatttatgtgaaaatcatttatttagattgaaat 25337499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 31 - 228
Target Start/End: Complemental strand, 10228801 - 10228603
Alignment:
Q  31 gatctgcaatgttgatgtccaagtcgtttactgaatagaagatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgca 130  Q
    ||||||||| ||||| |||||| || || | ||||||    |||||||||||| ||  |||| ||||||| || || | | |||| ||||||||||||||    
T  10228801 gatctgcaacgttgacgtccaaatctttgattgaataatcaatctttcaatagaaataaaatgaacaccacaagaagacgggaaagcaaacaacgccgca 10228702  T
Q  131 caagacgccgaacaacacagcaccacacctagacgataaaacctcgaagaaaaaatc-tagatatatgtgaaaactc-cttatttagattgaaatagaga 228  Q
    ||||||| ||||||||| | || ||||| || | ||| ||| | | ||||||||| | ||||||||||| |||| || ||||||||||||||| ||||||    
T  10228701 caagacgacgaacaacaaaccatcacacttaaatgatgaaatcacaaagaaaaaaacatagatatatgt-aaaagtcacttatttagattgaagtagaga 10228603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 71 - 224
Target Start/End: Complemental strand, 8497049 - 8496893
Alignment:
Q  71 gatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaa 170  Q
    |||||||||||| ||| ||||| ||||||  |  || | |||||||||||||||||||||||||| | ||||||||| | |||| ||| || | ||| ||    
T  8497049 gatctttcaatatgaatcaaatgaacaccgcacgaagacgagaaatcaaacaacgccgcacaagatgacgaacaacaaatcaccgcacttaaatgatgaa 8496950  T
Q  171 acctc---gaagaaaaaatctagatatatgtgaaaactccttatttagattgaaata 224  Q
    ||  |   ||| |||||| |||||| ||||||||||   ||||||||||||||||||    
T  8496949 actacaaagaaaaaaaaacctagatctatgtgaaaatcacttatttagattgaaata 8496893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 75 - 149
Target Start/End: Complemental strand, 22571533 - 22571459
Alignment:
Q  75 tttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacaca 149  Q
    ||||||||  |||||||  ||||||| ||||||| |  ||||||||||||||||||||||||| |||||||||||    
T  22571533 tttcaatattaaccaaacgaacaccataacaaaacgcaaaatcaaacaacgccgcacaagacgacgaacaacaca 22571459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 71 - 149
Target Start/End: Complemental strand, 8102789 - 8102707
Alignment:
Q  71 gatctttcaataggaaccaaataaacacc--aaaacaaaa--tgagaaatcaaacaacgccgcacaagacgccgaacaacaca 149  Q
    |||||||||||| |||||||| |||||||  | |||||||  || |||||||||||||||||||||||||| |||| ||||||    
T  8102789 gatctttcaatacgaaccaaacaaacaccgcacaacaaaagatgcgaaatcaaacaacgccgcacaagacgacgaaaaacaca 8102707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 113 - 228
Target Start/End: Original strand, 33740615 - 33740731
Alignment:
Q  113 aaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaaacctcgaag-aaaaaatctagatatatgtgaaaactccttat 211  Q
    |||| |||||||||||||||| ||| ||||||||| | | |||||| |||| ||| ||| | | ||| |||||| ||| || ||||||||||   |||||    
T  33740615 aaatgaaacaacgccgcacaaaacgacgaacaacaaaccgccacacttagatgatgaaatcacaaagaaaaaaacctaaatctatgtgaaaatcacttat 33740714  T
Q  212 ttagattgaaatagaga 228  Q
    |||||||||||||||||    
T  33740715 ttagattgaaatagaga 33740731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 32 - 163
Target Start/End: Original strand, 4984523 - 4984654
Alignment:
Q  32 atctgcaatgttgatgtccaagtcgtttactgaatagaagatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcac 131  Q
    |||||||| ||||||| |||| || || | ||||||   |||||||||||| ||| ||||| ||||||  |  || | | ||||||||||||| ||||||    
T  4984523 atctgcaacgttgatgcccaaatctttgattgaataatcgatctttcaatatgaatcaaatgaacacctcacgaagacgggaaatcaaacaacaccgcac 4984622  T
Q  132 aagacgccgaacaacacagcaccacacctaga 163  Q
    |||||| ||||||||| | |||||||| ||||    
T  4984623 aagacgacgaacaacaaaccaccacacttaga 4984654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 71 - 137
Target Start/End: Original strand, 26588499 - 26588565
Alignment:
Q  71 gatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacg 137  Q
    |||||||||||| ||||||||  ||||||  ||||| | | ||||||||||||||||||||||||||    
T  26588499 gatctttcaatatgaaccaaacgaacaccgcaacaagacgggaaatcaaacaacgccgcacaagacg 26588565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 113 - 155
Target Start/End: Original strand, 33543657 - 33543699
Alignment:
Q  113 aaatcaaacaacgccgcacaagacgccgaacaacacagcacca 155  Q
    ||||||||||||||||||||||||| ||||||||||| |||||    
T  33543657 aaatcaaacaacgccgcacaagacgacgaacaacacaccacca 33543699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 72 - 147
Target Start/End: Original strand, 28635117 - 28635192
Alignment:
Q  72 atctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaaca 147  Q
    ||||||||||| ||| ||||| ||||||  ||| | | ||||||||||||||| ||| |||||||| |||||||||    
T  28635117 atctttcaatatgaatcaaatgaacaccgcaacgatacgagaaatcaaacaacaccgtacaagacgacgaacaaca 28635192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 70 - 166
Target Start/End: Original strand, 68027 - 68120
Alignment:
Q  70 agatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacga 166  Q
    |||||||||| |||||||  || ||||||||  |||||| | ||||||||||   |||||||||||||  ||| |||||| |||||||| |||||||    
T  68027 agatctttcattaggaactgaacaaacaccacgacaaaacgcgaaatcaaac---gccgcacaagacggtgaataacacaacaccacacttagacga 68120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 71 - 146
Target Start/End: Complemental strand, 546093 - 546014
Alignment:
Q  71 gatctttcaataggaaccaaataaacac----caaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaac 146  Q
    |||||||||||| ||||||||  |||||    ||| | |||||| |||||||||||||| ||||||||||| ||||||||    
T  546093 gatctttcaatacgaaccaaacgaacaccgcacaacaaaaaatgtgaaatcaaacaacgtcgcacaagacgacgaacaac 546014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 70 - 166
Target Start/End: Complemental strand, 606268 - 606175
Alignment:
Q  70 agatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacga 166  Q
    ||||||||||||||||||  || |||||||   |||||||| |||||||   |||||||||||||| | ||||||||||| | || ||| |||||||    
T  606268 agatctttcaataggaactgaacaaacaccgcgacaaaatgcgaaatca---aacgccgcacaagatgacgaacaacacaacgccgcacttagacga 606175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 113 - 171
Target Start/End: Complemental strand, 8266682 - 8266624
Alignment:
Q  113 aaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaaa 171  Q
    ||||||||||||||||||||||||  |||| ||||||||| | |||| |||||| ||||    
T  8266682 aaatcaaacaacgccgcacaagacaacgaataacacagcaacgcacccagacgacaaaa 8266624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 113 - 163
Target Start/End: Complemental strand, 17334818 - 17334768
Alignment:
Q  113 aaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctaga 163  Q
    ||||||||||||||||||||||||| || |||||| | |||||||| ||||    
T  17334818 aaatcaaacaacgccgcacaagacgacgtacaacaaatcaccacacttaga 17334768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 148
Target Start/End: Original strand, 17346555 - 17346632
Alignment:
Q  71 gatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacac 148  Q
    ||||||||| |||||||||||| ||||    | |||||| ||||||||||||||  | ||||||||| ||||||||||    
T  17346555 gatctttcattaggaaccaaatgaacattgcaccaaaataagaaatcaaacaacatcacacaagacgacgaacaacac 17346632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 72 - 149
Target Start/End: Complemental strand, 28981239 - 28981162
Alignment:
Q  72 atctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacaca 149  Q
    |||||| |||| ||||||||  ||||||| ||||| ||   |||||||||||| ||||| |||||| |||||||||||    
T  28981239 atctttgaatatgaaccaaacgaacaccacaacaagatacaaaatcaaacaacaccgcagaagacgacgaacaacaca 28981162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 113 - 149
Target Start/End: Complemental strand, 14801844 - 14801808
Alignment:
Q  113 aaatcaaacaacgccgcacaagacgccgaacaacaca 149  Q
    |||||||||| |||||||||||||| |||||||||||    
T  14801844 aaatcaaacagcgccgcacaagacgacgaacaacaca 14801808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 113 - 149
Target Start/End: Complemental strand, 30776689 - 30776653
Alignment:
Q  113 aaatcaaacaacgccgcacaagacgccgaacaacaca 149  Q
    ||||||||||||||||||||||| | |||||||||||    
T  30776689 aaatcaaacaacgccgcacaagatgacgaacaacaca 30776653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 75 - 171
Target Start/End: Original strand, 32191759 - 32191855
Alignment:
Q  75 tttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaaa 171  Q
    |||||| | ||||||||| |||||| |||||| ||  |||| ||||||||||| |||||| |  ||||||||||| | || ||| ||||||| ||||    
T  32191759 tttcaagatgaaccaaatgaacaccgaaacaatatacgaaaccaaacaacgccacacaagtcaacgaacaacacaacgccgcacttagacgacaaaa 32191855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 62; Significance: 2e-26; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 71 - 228
Target Start/End: Original strand, 1448825 - 1448982
Alignment:
Q  71 gatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaa 170  Q
    |||||||||||| ||| ||||| ||||||  || || | |||||||||||||||||||||||| ||| ||||||||| |  ||||||| |||| ||| ||    
T  1448825 gatctttcaatatgaatcaaatgaacaccgcaagaagacgagaaatcaaacaacgccgcacaatacgacgaacaacaaacaaccacacttagatgatgaa 1448924  T
Q  171 acctcgaagaaaaaatctagatatatgtgaaaactccttatttagattgaaatagaga 228  Q
    | | | || ||||||||||||| ||||||||||   ||||||||||||||||||||||    
T  1448925 atcacaaataaaaaatctagatctatgtgaaaatcacttatttagattgaaatagaga 1448982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 31 - 228
Target Start/End: Original strand, 1485212 - 1485409
Alignment:
Q  31 gatctgcaatgttgatgtccaagtcgtttactgaatagaagatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgca 130  Q
    ||||||||||||||| |||||| || || | ||||||   ||| ||||||| ||||  |||| || |||  || || ||| |||| |||||||||| |||    
T  1485212 gatctgcaatgttgacgtccaaatctttgattgaataatcgatttttcaattggaataaaatgaataccgcaagaagatgggaaaacaaacaacgctgca 1485311  T
Q  131 caagacgccgaacaacacagcaccacacctagacgataaaacctcgaagaaaaaatctagatatatgtgaaaactccttatttagattgaaatagaga 228  Q
    ||||||| ||||||||| | |||||||| |||| ||| ||| | | |||||||||||||||| |||||||||    ||||||||||||||||||||||    
T  1485312 caagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaaaaaatctagatctatgtgaaagtcacttatttagattgaaatagaga 1485409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 71 - 228
Target Start/End: Original strand, 31235787 - 31235945
Alignment:
Q  71 gatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaa 170  Q
    |||||||||||| ||| ||||| ||||||  ||| | | ||||||||||||||||| |||||||||| ||||||||| | | |||||| |||| ||  ||    
T  31235787 gatctttcaatatgaatcaaatgaacaccgcaacgatacgagaaatcaaacaacgctgcacaagacgacgaacaacaaaccgccacacttagatgacgaa 31235886  T
Q  171 acctcgaagaaaaaatctagatatatgtgaaaactc-cttatttagattgaaatagaga 228  Q
    | | || ||| |||| |||||| |||||||||| || ||||||||||||||||||||||    
T  31235887 atcacgtagagaaaacctagatctatgtgaaaaatcacttatttagattgaaatagaga 31235945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 71 - 228
Target Start/End: Original strand, 35667227 - 35667384
Alignment:
Q  71 gatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaa 170  Q
    |||||||||||| ||| ||||| ||||||  || || | |  |||||||| |||||||||||||||| ||||||||| | |||||||| |||| ||| ||    
T  35667227 gatctttcaatatgaatcaaatgaacaccgcaagaagacggaaaatcaaaaaacgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaa 35667326  T
Q  171 acctcgaagaaaaaatctagatatatgtgaaaactccttatttagattgaaatagaga 228  Q
    | |   ||||||||| |||||| ||||||||||   ||||||||||||||||||||||    
T  35667327 atcaaaaagaaaaaacctagatctatgtgaaaatcacttatttagattgaaatagaga 35667384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 31 - 228
Target Start/End: Original strand, 22927825 - 22928023
Alignment:
Q  31 gatctgcaatgttgatgtccaagtcgtttactgaatagaagatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgca 130  Q
    ||||||||| ||||| |||||| || || | ||||||   ||||||||||||||||  |||| ||||||  || || | | |||| ||||||||||||||    
T  22927825 gatctgcaacgttgacgtccaaatctttgattgaataatcgatctttcaataggaataaaatgaacaccgcaagaagacgggaaagcaaacaacgccgca 22927924  T
Q  131 caagacgccgaacaacacagcaccacacctagacgataaaacctcgaag-aaaaaatctagatatatgtgaaaactccttatttagattgaaatagaga 228  Q
    ||||||| ||||||||| | |||||||| |||| ||| ||| | | ||| |||||| |||||| | |||||||    ||||||||||||||||||||||    
T  22927925 caagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaaaaaaaactagatctgtgtgaaagtcacttatttagattgaaatagaga 22928023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 71 - 221
Target Start/End: Complemental strand, 23786657 - 23786508
Alignment:
Q  71 gatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaa 170  Q
    |||||||||||| ||| ||||| ||||||  || || | ||||||||||||||||||||| |||||| ||||||||| | |||||||| |||| |||  |    
T  23786657 gatctttcaatatgaatcaaatgaacaccgcaagaagacgagaaatcaaacaacgccgcagaagacgacgaacaacaaaccaccacacttagatgat-ga 23786559  T
Q  171 acctcgaagaaaaaatctagatatatgtgaaaactccttatttagattgaa 221  Q
    | | | |||||||||| ||||||| ||||||||   |||||||||||||||    
T  23786558 atcacaaagaaaaaatttagatatgtgtgaaaatcacttatttagattgaa 23786508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 112 - 229
Target Start/End: Complemental strand, 26583755 - 26583637
Alignment:
Q  112 gaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaaacctcgaag-aaaaaatctagatatatgtgaaaactcctta 210  Q
    ||||||||||||||||||||||||||  |||||||| | |||||||| |||| ||| ||| | | ||| |||||| |||||||||| ||||||   ||||    
T  26583755 gaaatcaaacaacgccgcacaagacgatgaacaacaaaccaccacacttagatgatgaaatcacaaagaaaaaaacctagatatatatgaaaatcactta 26583656  T
Q  211 tttagattgaaatagagat 229  Q
    |||||||||||||||||||    
T  26583655 tttagattgaaatagagat 26583637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 76 - 229
Target Start/End: Original strand, 42067061 - 42067214
Alignment:
Q  76 ttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaaacctc 175  Q
    ||||||| ||| ||||| ||||||  || || | ||||||||||||| |||||||||||||| ||||||||| | || ||||| |||| ||| ||| |      
T  42067061 ttcaatatgaatcaaatgaacaccgcaagaagacgagaaatcaaacagcgccgcacaagacgacgaacaacaaaccaacacacttagatgatgaaatcag 42067160  T
Q  176 gaagaaaaaatctagatatatgtgaaaactccttatttagattgaaatagagat 229  Q
     ||||||||||||| || ||||||||||   |||||||||||||||||| ||||    
T  42067161 aaagaaaaaatctatatctatgtgaaaatcacttatttagattgaaatatagat 42067214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 71 - 228
Target Start/End: Original strand, 14627874 - 14628032
Alignment:
Q  71 gatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaa 170  Q
    |||||||||||| ||| ||||||||||||  |  || | |||||||||||||||||||||||| ||| ||||||||| | |||||||| |||| ||| ||    
T  14627874 gatctttcaatatgaatcaaataaacaccgtactaagacgagaaatcaaacaacgccgcacaatacgacgaacaacaaaccaccacacttagatgatgaa 14627973  T
Q  171 acctcgaag-aaaaaatctagatatatgtgaaaactccttatttagattgaaatagaga 228  Q
    | | | | | |||||| ||| || ||||||||||   ||||||||||||||| ||||||    
T  14627974 atcacaaggaaaaaaacctatatttatgtgaaaatcacttatttagattgaattagaga 14628032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 71 - 228
Target Start/End: Original strand, 32521922 - 32522079
Alignment:
Q  71 gatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaa 170  Q
    |||||||||||| ||| ||||| ||||||| ||||||| |  ||||||||||||||||||||||| | |||||||||||  |||||||  ||| |   ||    
T  32521922 gatctttcaatatgaatcaaatgaacaccacaacaaaacggaaaatcaaacaacgccgcacaagatgacgaacaacacacaaccacactcagatggcgaa 32522021  T
Q  171 acctcgaagaaaaaatctagatatatgtgaaaactccttatttagattgaaatagaga 228  Q
    |   |||||||||||  || || ||||||||||   |||||||| |||||||||||||    
T  32522022 ataacgaagaaaaaacataaatctatgtgaaaatcacttatttaaattgaaatagaga 32522079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 112 - 224
Target Start/End: Complemental strand, 48207942 - 48207830
Alignment:
Q  112 gaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaaacctcgaagaaaaaatctagatatatgtgaaaactccttat 211  Q
    ||||||||||| ||| |||||||||| ||||||||| | |||||||| |||| ||| ||| | | |||||||||  ||||| ||||||||||   |||||    
T  48207942 gaaatcaaacagcgcagcacaagacgacgaacaacaaatcaccacacttagatgatgaaatcacaaagaaaaaacatagatctatgtgaaaatcacttat 48207843  T
Q  212 ttagattgaaata 224  Q
    |||||||||||||    
T  48207842 ttagattgaaata 48207830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 71 - 226
Target Start/End: Complemental strand, 20116664 - 20116509
Alignment:
Q  71 gatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaa 170  Q
    |||||||||||| ||| ||||| ||||||  || || | |  ||||||||||||| ||||||||||| ||||||||| |  ||||||  || | ||| ||    
T  20116664 gatctttcaatatgaatcaaatgaacaccgcaagaagacggtaaatcaaacaacgacgcacaagacgacgaacaacaaacaaccacatgtatatgatgaa 20116565  T
Q  171 acctcgaagaaaaaatctagatatatgtgaaaactccttatttagattgaaataga 226  Q
    | | | ||||||||| |||||| ||||||||||   ||||||||||||||||||||    
T  20116564 atcacaaagaaaaaacctagatctatgtgaaaatcacttatttagattgaaataga 20116509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 31 - 144
Target Start/End: Complemental strand, 19560120 - 19560007
Alignment:
Q  31 gatctgcaatgttgatgtccaagtcgtttactgaatagaagatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgca 130  Q
    ||||||||| ||||| |||||| || || | ||||||    ||||||||||| ||| ||||| |||||   || ||||||||||||||||||||||||||    
T  19560120 gatctgcaaggttgacgtccaaatctttgattgaataatcaatctttcaatatgaatcaaatgaacacatcaagaaaatgagaaatcaaacaacgccgca 19560021  T
Q  131 caagacgccgaaca 144  Q
    ||||||| ||||||    
T  19560020 caagacgacgaaca 19560007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 112 - 228
Target Start/End: Complemental strand, 26492406 - 26492289
Alignment:
Q  112 gaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaaacctcgaag-aaaaaatctagatatatgtgaaaactcctta 210  Q
    ||||||||||||||| |||||||||| || |||||| | |||||||| |||| ||| ||| | | ||| |||||| |||||| ||||||||||   ||||    
T  26492406 gaaatcaaacaacgcagcacaagacggcggacaacaaaccaccacacttagatgatgaaatcacaaagaaaaaaaactagatctatgtgaaaatcactta 26492307  T
Q  211 tttagattgaaatagaga 228  Q
    |||| |||||||||||||    
T  26492306 tttaaattgaaatagaga 26492289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 112 - 228
Target Start/End: Original strand, 35496211 - 35496328
Alignment:
Q  112 gaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaaacctcgaag-aaaaaatctagatatatgtgaaaactcctta 210  Q
    ||||| ||||||||||||||||||||  |||||||| | |||||||| |||| ||| ||| | | ||| |||||| |||||| ||||||||||   ||||    
T  35496211 gaaatgaaacaacgccgcacaagacgatgaacaacaaaccaccacacttagatgatgaaatcacaaagaaaaaaacctagatctatgtgaaaatcactta 35496310  T
Q  211 tttagattgaaatagaga 228  Q
     |||||||||||||||||    
T  35496311 attagattgaaatagaga 35496328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 112 - 224
Target Start/End: Original strand, 23425408 - 23425520
Alignment:
Q  112 gaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaaacctcgaagaaaaaatctagatatatgtgaaaactccttat 211  Q
    ||||||||||| | |||||||||||| ||||||||| | |||||||| || | ||| ||| | | ||||||||| |||||| ||||| ||||   |||||    
T  23425408 gaaatcaaacagcaccgcacaagacgacgaacaacaaaccaccacacttaaatgatgaaatcacaaagaaaaaacctagatctatgtaaaaatcacttat 23425507  T
Q  212 ttagattgaaata 224  Q
    |||||||||||||    
T  23425508 ttagattgaaata 23425520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 71 - 225
Target Start/End: Complemental strand, 6002103 - 6001948
Alignment:
Q  71 gatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaa 170  Q
    |||||||||||| ||| ||||| ||||||   || | | |||||||||||||||||||||||||||| ||||||||| | | ||||||  ||| ||  ||    
T  6002103 gatctttcaatatgaatcaaatgaacaccgcgacgatacgagaaatcaaacaacgccgcacaagacgacgaacaacaaaccgccacactcagatgacgaa 6002004  T
Q  171 acctcgaagaaaaaatctagatatatgtgaaaactc-cttatttagattgaaatag 225  Q
    | | || ||| |||| ||| || |||||||||| || |||||||||||| ||||||    
T  6002003 atcacgtagagaaaacctaaatctatgtgaaaaatcacttatttagattaaaatag 6001948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 28 - 226
Target Start/End: Complemental strand, 23085646 - 23085447
Alignment:
Q  28 ccagatctgcaatgttgatgtccaagtcgtttactgaatagaagatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgcc 127  Q
    |||||||||||| ||||| || ||| || || | ||||||   |||||||||||| |||  |||| ||||||  || || | | |||| ||||||| |||    
T  23085646 ccagatctgcaacgttgacgttcaaatctttgattgaataatcgatctttcaatatgaataaaatgaacaccgcaagaagacgggaaagcaaacaatgcc 23085547  T
Q  128 gcacaagacgccgaacaacacagcaccacacctagacgataaaacctcgaagaaaaaatc-tagatatatgtgaaaactccttatttagattgaaataga 226  Q
    ||||| |||| ||||||||| | |||||||| |||| ||||||| | | ||||||||| | ||||| |||||||||     |||||||||||||||||||    
T  23085546 gcacatgacgacgaacaacaaaccaccacacttagatgataaaatcacaaagaaaaaaacctagatctatgtgaaagtcaattatttagattgaaataga 23085447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 112 - 224
Target Start/End: Complemental strand, 46822056 - 46821942
Alignment:
Q  112 gaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaaacctcgaag--aaaaaatctagatatatgtgaaaactcctt 209  Q
    |||||||||||||||||||||||| | ||||||||| | ||||| || |||| ||| |||   | |||  ||||||||||||| ||||||||||   |||    
T  46822056 gaaatcaaacaacgccgcacaagaagacgaacaacaaatcaccatacttagatgatgaaattacaaagaaaaaaaatctagatctatgtgaaaatcactt 46821957  T
Q  210 atttagattgaaata 224  Q
    |||||||||||||||    
T  46821956 atttagattgaaata 46821942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 70 - 166
Target Start/End: Original strand, 9450163 - 9450256
Alignment:
Q  70 agatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacga 166  Q
    ||||||||||||||||||  || |||||||   |||||||| ||||||||||   ||||||||||||| ||||||||||| | |||||| |||||||    
T  9450163 agatctttcaataggaactgaacaaacaccgcgacaaaatgcgaaatcaaac---gccgcacaagacgacgaacaacacaacgccacacttagacga 9450256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 113 - 203
Target Start/End: Original strand, 17223036 - 17223126
Alignment:
Q  113 aaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaaacctcgaagaaaaaatctagatatatgtgaaaa 203  Q
    ||||||||| |||||||||||||||  |||||||| | |||||||| |||| ||| ||| | | ||||||||| |||||| ||||||||||    
T  17223036 aaatcaaaccacgccgcacaagacgatgaacaacaaatcaccacacttagatgatgaaatcacaaagaaaaaacctagatctatgtgaaaa 17223126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 71 - 149
Target Start/End: Original strand, 24350864 - 24350946
Alignment:
Q  71 gatctttcaataggaaccaaataaacac----caaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacaca 149  Q
    |||||||||||| ||||||||  |||||    ||| | |||||| |||||||||||||||||||||||||| |||||||||||    
T  24350864 gatctttcaatacgaaccaaacgaacactgcacaacaaaaaatgtgaaatcaaacaacgccgcacaagacgacgaacaacaca 24350946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 105 - 149
Target Start/End: Complemental strand, 22742970 - 22742926
Alignment:
Q  105 aaaatgagaaatcaaacaacgccgcacaagacgccgaacaacaca 149  Q
    |||||| |||||||||||||||||||||||||| |||||||||||    
T  22742970 aaaatgtgaaatcaaacaacgccgcacaagacgacgaacaacaca 22742926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 71 - 149
Target Start/End: Complemental strand, 28476291 - 28476209
Alignment:
Q  71 gatctttcaataggaaccaaataaacacc--aaaacaaaa--tgagaaatcaaacaacgccgcacaagacgccgaacaacaca 149  Q
    |||||||||||| ||||||||  ||||||  | |||||||  || |||||||||||||||||||||||||| |||||||||||    
T  28476291 gatctttcaatacgaaccaaacgaacaccgcacaacaaaagatgcgaaatcaaacaacgccgcacaagacgacgaacaacaca 28476209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 71 - 228
Target Start/End: Original strand, 433686 - 433845
Alignment:
Q  71 gatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacacagcacc-acacctagacgataa 169  Q
    ||||||||||||||||  |||| |||||   || || | |||||| |||||||||| |||||||||  ||||||||| | |||| |||| |||| ||| |    
T  433686 gatctttcaataggaataaaatgaacactgtaagaagacgagaaagcaaacaacgctgcacaagacaacgaacaacaaaccacccacacttagatgatga 433785  T
Q  170 aacctcgaagaaaaaa-tctagatatatgtgaaaactccttatttagattgaaatagaga 228  Q
    || | | ||||||||| ||||||| |||||||||     |||||||||||||||||||||    
T  433786 aatcacaaagaaaaaaatctagatctatgtgaaagtcatttatttagattgaaatagaga 433845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 113 - 203
Target Start/End: Complemental strand, 17611165 - 17611075
Alignment:
Q  113 aaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaaacctcgaagaaaaaatctagatatatgtgaaaa 203  Q
    |||||||||||| |||||||||||| |||| |||||| ||||||||   || ||  ||| | |||||||||||||||| | ||||||||||    
T  17611165 aaatcaaacaactccgcacaagacgacgaataacacaccaccacactcggatgacgaaatcacgaagaaaaaatctagttttatgtgaaaa 17611075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 71 - 149
Target Start/End: Original strand, 41553461 - 41553539
Alignment:
Q  71 gatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacaca 149  Q
    |||||||||||| ||||||||  ||||||| ||||| | | ||||||||| |||| | ||||||||| |||||||||||    
T  41553461 gatctttcaatatgaaccaaacgaacaccataacaagacgcgaaatcaaataacgtcacacaagacgacgaacaacaca 41553539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 71 - 149
Target Start/End: Original strand, 41553806 - 41553884
Alignment:
Q  71 gatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacaca 149  Q
    |||||||||||| ||||||||  ||||||| ||||| | | ||||||||| |||| | ||||||||| |||||||||||    
T  41553806 gatctttcaatatgaaccaaacgaacaccataacaagacgcgaaatcaaataacgtcacacaagacgacgaacaacaca 41553884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 113 - 224
Target Start/End: Complemental strand, 46339094 - 46338981
Alignment:
Q  113 aaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaaacctcgaag--aaaaaatctagatatatgtgaaaactcctta 210  Q
    ||||||||||||||||||||||||| ||||||||| | |||||||| || | ||| |||   | |||  |||||| |||||| ||||||||||   ||||    
T  46339094 aaatcaaacaacgccgcacaagacgacgaacaacaaatcaccacacttaaatgatgaaattacaaagaaaaaaaagctagatctatgtgaaaatcactta 46338995  T
Q  211 tttagattgaaata 224  Q
    |||| |||||||||    
T  46338994 tttacattgaaata 46338981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 71 - 149
Target Start/End: Original strand, 26623817 - 26623892
Alignment:
Q  71 gatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacaca 149  Q
    ||||||||||||||||||||| |||||||  ||||| |||  ||||||   ||||||| |||||||| |||||||||||    
T  26623817 gatctttcaataggaaccaaacaaacaccgcaacaagatgcaaaatca---aacgccgtacaagacgacgaacaacaca 26623892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 113 - 228
Target Start/End: Complemental strand, 42311320 - 42311204
Alignment:
Q  113 aaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaaacctcgaagaaaaaatc-tagatatatgtgaaaactccttat 211  Q
    |||||||||||||| ||| |||||| ||||||||| | | |||||| || | ||| ||| | | ||||||||| | ||||| |||||||| |   |||||    
T  42311320 aaatcaaacaacgctgcataagacgacgaacaacaaaccgccacacttaaatgatgaaatcacaaagaaaaaaacctagatctatgtgaatatcacttat 42311221  T
Q  212 ttagattgaaatagaga 228  Q
    |||||||||||||||||    
T  42311220 ttagattgaaatagaga 42311204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 113 - 224
Target Start/End: Complemental strand, 42408402 - 42408290
Alignment:
Q  113 aaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaaacctcgaag-aaaaaatctagatatatgtgaaaactccttat 211  Q
    |||||||||||||| |||||||||| ||||||||| | |||||||| || | ||| ||| | | ||| |||||| ||||||  |||||||||    ||||    
T  42408402 aaatcaaacaacgctgcacaagacgacgaacaacaaaccaccacacttaaatgatgaaatcacaaagaaaaaaacctagatccatgtgaaaaacaattat 42408303  T
Q  212 ttagattgaaata 224  Q
    |||||||||||||    
T  42408302 ttagattgaaata 42408290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 112 - 224
Target Start/End: Original strand, 45199068 - 45199180
Alignment:
Q  112 gaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaaacctcgaagaaaaaatctagatatatgtgaaaactccttat 211  Q
    ||||||||||| |||||||||| ||| ||||||||| | |||||||| |||| ||| ||| | | |||||||||  ||||| ||| ||||||   |||||    
T  45199068 gaaatcaaacagcgccgcacaaaacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaaaaaacttagatctatatgaaaatcacttat 45199167  T
Q  212 ttagattgaaata 224  Q
    ||| ||| |||||    
T  45199168 ttaaattaaaata 45199180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 112 - 183
Target Start/End: Complemental strand, 3394497 - 3394426
Alignment:
Q  112 gaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaaacctcgaagaaaa 183  Q
    ||||||||||||| || ||||||||| ||||||||||| |||| |||  ||||||| ||| | |||||||||    
T  3394497 gaaatcaaacaacaccacacaagacgacgaacaacacaacaccgcactcagacgatgaaatcacgaagaaaa 3394426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 112 - 147
Target Start/End: Complemental strand, 32684709 - 32684674
Alignment:
Q  112 gaaatcaaacaacgccgcacaagacgccgaacaaca 147  Q
    |||||||||||||||||||||||||| |||||||||    
T  32684709 gaaatcaaacaacgccgcacaagacgacgaacaaca 32684674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 75 - 185
Target Start/End: Original strand, 969478 - 969588
Alignment:
Q  75 tttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaaacct 174  Q
    |||||||| |||||||| |||||||  || || | |  |||||||||||||||||| |||||| ||||||||||| | |||||   | ||||| ||| |     
T  969478 tttcaatatgaaccaaacaaacaccgcaataagacgcaaaatcaaacaacgccgcaaaagacgacgaacaacacaacgccacattcaaacgatgaaatca 969577  T
Q  175 cgaagaaaaaa 185  Q
    |||||||||||    
T  969578 cgaagaaaaaa 969588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 70 - 166
Target Start/End: Complemental strand, 19296935 - 19296842
Alignment:
Q  70 agatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacga 166  Q
    ||||||||||| ||||||  || |||||||   |||||||| ||||||||||   ||||||||||||| ||||||||||| | || ||| |||||||    
T  19296935 agatctttcaagaggaactgaacaaacaccgcgacaaaatgcgaaatcaaac---gccgcacaagacgacgaacaacacaacgccgcacttagacga 19296842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 75 - 149
Target Start/End: Original strand, 41554155 - 41554229
Alignment:
Q  75 tttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacaca 149  Q
    |||||||| ||||||||  ||||||| ||||| | | ||||||||| |||| | ||||||||| |||||||||||    
T  41554155 tttcaatatgaaccaaacgaacaccataacaagacgcgaaatcaaataacgtcacacaagacgacgaacaacaca 41554229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 71 - 145
Target Start/End: Original strand, 44311819 - 44311892
Alignment:
Q  71 gatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaa 145  Q
    ||||||| ||||| ||||||| ||| || | ||||||||| |||||||||||||| |||| |||||| |||||||    
T  44311819 gatcttttaatagaaaccaaacaaatac-acaacaaaatgtgaaatcaaacaacgtcgcagaagacgacgaacaa 44311892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 75 - 149
Target Start/End: Original strand, 46244268 - 46244342
Alignment:
Q  75 tttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacaca 149  Q
    |||||||||||||||||| ||||||| ||||| ||||   ||||||||||| |||| |||| | | |||||||||    
T  46244268 tttcaataggaaccaaatgaacaccacaacaagatgatggatcaaacaacgtcgcataagatgacaaacaacaca 46244342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 149
Target Start/End: Original strand, 1749219 - 1749256
Alignment:
Q  112 gaaatcaaacaacgccgcacaagacgccgaacaacaca 149  Q
    |||||||||||| ||||||||||||| |||||||||||    
T  1749219 gaaatcaaacaatgccgcacaagacgacgaacaacaca 1749256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 149
Target Start/End: Complemental strand, 35132966 - 35132929
Alignment:
Q  112 gaaatcaaacaacgccgcacaagacgccgaacaacaca 149  Q
    ||||||||||||||||| |||||||| |||||||||||    
T  35132966 gaaatcaaacaacgccgaacaagacgacgaacaacaca 35132929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 143 - 228
Target Start/End: Complemental strand, 36143875 - 36143790
Alignment:
Q  143 caacacagcaccacacctagacgataaaacctcgaagaaaaaatctagatatatgtgaaaactccttatttagattgaaatagaga 228  Q
    ||||||| ||||||||  ||||||  ||| | ||||||||||| |||||| || |||||||   ||||||||||||||| ||||||    
T  36143875 caacacaccaccacactcagacgacgaaatcacgaagaaaaaacctagatctacgtgaaaaacacttatttagattgaattagaga 36143790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 149
Target Start/End: Complemental strand, 48930792 - 48930755
Alignment:
Q  112 gaaatcaaacaacgccgcacaagacgccgaacaacaca 149  Q
    |||||||||||||||||||||||||| |||| ||||||    
T  48930792 gaaatcaaacaacgccgcacaagacgacgaataacaca 48930755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 71 - 149
Target Start/End: Original strand, 39328817 - 39328892
Alignment:
Q  71 gatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacaca 149  Q
    ||||||||||||||||  ||| |||||||   |||||| | ||||||||||   ||||||||||||| |||||||||||    
T  39328817 gatctttcaataggaaataaacaaacaccgcgacaaaacgcgaaatcaaac---gccgcacaagacgacgaacaacaca 39328892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 71 - 135
Target Start/End: Original strand, 46818411 - 46818475
Alignment:
Q  71 gatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaaga 135  Q
    ||||||| |||| |||  |||| ||||||  ||||| | ||||||||||||||||||||||||||    
T  46818411 gatcttttaatatgaattaaatgaacaccgcaacaatacgagaaatcaaacaacgccgcacaaga 46818475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 62; Significance: 2e-26; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 31 - 228
Target Start/End: Complemental strand, 46934761 - 46934564
Alignment:
Q  31 gatctgcaatgttgatgtccaagtcgtttactgaatagaagatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgca 130  Q
    ||||||||||||||| | |||| ||||| | ||||||   |||||||||||| ||| ||||| ||||||  || || | | ||||||||||||| |||||    
T  46934761 gatctgcaatgttgacgcccaaatcgttgattgaataatcgatctttcaatatgaatcaaatgaacaccgcaagaagacgggaaatcaaacaacaccgca 46934662  T
Q  131 caagacgccgaacaacacagcaccacacctagacgataaaacctcgaagaaaaaatctagatatatgtgaaaactccttatttagattgaaatagaga 228  Q
    ||||||| ||||||||| | |||||||| |||| ||| ||| |   ||||||||| || ||| ||||||||||   ||||||||||||||||||||||    
T  46934661 caagacgacgaacaacaaaccaccacacttagatgatgaaatcaacaagaaaaaacctggatctatgtgaaaatcacttatttagattgaaatagaga 46934564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 71 - 228
Target Start/End: Original strand, 49552219 - 49552376
Alignment:
Q  71 gatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaa 170  Q
    |||||||||||  |||  |||| ||||||  || |||| |||||||||||||||||||||||||||| ||||||||| | |||||||  |||| ||| ||    
T  49552219 gatctttcaatgtgaataaaatgaacaccgcaagaaaacgagaaatcaaacaacgccgcacaagacgacgaacaacaaaccaccacatttagatgatgaa 49552318  T
Q  171 acctcgaagaaaaaatctagatatatgtgaaaactccttatttagattgaaatagaga 228  Q
    | | | ||||||||| ||||||  ||||||||    ||||||||||||||||||||||    
T  49552319 atcacaaagaaaaaacctagattaatgtgaaattcacttatttagattgaaatagaga 49552376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 71 - 228
Target Start/End: Complemental strand, 25162515 - 25162358
Alignment:
Q  71 gatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaa 170  Q
    |||||||||||| ||| ||||| ||||||  |  || ||| |||||||||||||||||||||||||| ||||||||| |  ||||||| |||| ||| ||    
T  25162515 gatctttcaatatgaaacaaatgaacaccgcacgaagatgggaaatcaaacaacgccgcacaagacgacgaacaacaaactaccacacttagatgatgaa 25162416  T
Q  171 acctcgaag-aaaaaatctagatatatgtgaaaactccttatttagattgaaatagaga 228  Q
    | | | ||| |||||| |||||| ||||||||| |  ||||||||||||||||||||||    
T  25162415 atcacaaagaaaaaaacctagatctatgtgaaatc-acttatttagattgaaatagaga 25162358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 113 - 224
Target Start/End: Complemental strand, 29503499 - 29503388
Alignment:
Q  113 aaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaaacctcgaagaaaaaatctagatatatgtgaaaactccttatt 212  Q
    |||||||||| |||||||||||||| ||||||||| | |||||||| |||| ||| ||| | | ||||||||| |||||| ||||||||||    |||||    
T  29503499 aaatcaaacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaaaaaacctagatctatgtgaaaatcaattatt 29503400  T
Q  213 tagattgaaata 224  Q
    ||||||||||||    
T  29503399 tagattgaaata 29503388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 75 - 149
Target Start/End: Original strand, 12947305 - 12947379
Alignment:
Q  75 tttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacaca 149  Q
    |||||||| ||||||||  ||||||| ||||| ||| |||||||||||||||||||||||||| |||||||||||    
T  12947305 tttcaatatgaaccaaacgaacaccacaacaagatgcgaaatcaaacaacgccgcacaagacgacgaacaacaca 12947379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 114 - 228
Target Start/End: Complemental strand, 2342528 - 2342413
Alignment:
Q  114 aatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaaacctcgaagaaaaaa-tctagatatatgtgaaaactccttatt 212  Q
    |||||||||||||||||| ||||  |||| |||| | |||||||| |||| ||| ||| | | ||||||||| | ||||||||||||||||   ||||||    
T  2342528 aatcaaacaacgccgcactagacaacgaataacaaaccaccacacttagatgatgaaatcacaaagaaaaaaatatagatatatgtgaaaatcacttatt 2342429  T
Q  213 tagattgaaatagaga 228  Q
    ||||||||||||||||    
T  2342428 tagattgaaatagaga 2342413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 31 - 158
Target Start/End: Original strand, 3848874 - 3849001
Alignment:
Q  31 gatctgcaatgttgatgtccaagtcgtttactgaatagaagatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgca 130  Q
    ||||||||| ||||| |||||| || || | ||||||   ||||||||||||||||  |||| ||||||  || || ||| |||| ||||||||||||||    
T  3848874 gatctgcaacgttgacgtccaaatctttgattgaataatcgatctttcaataggaataaaatgaacaccgcaagaagatgggaaagcaaacaacgccgca 3848973  T
Q  131 caagacgccgaacaacacagcaccacac 158  Q
    ||||||| ||||||||| | ||||||||    
T  3848974 caagacgacgaacaacaaaccaccacac 3849001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 112 - 228
Target Start/End: Original strand, 25631562 - 25631680
Alignment:
Q  112 gaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaaacctcgaag--aaaaaatctagatatatgtgaaaactcctt 209  Q
    ||||| ||||||||||||||||||||  |||||||| | |||||||| |||| ||| ||| | | |||  |||||| |||||| ||||||||||   |||    
T  25631562 gaaatgaaacaacgccgcacaagacggagaacaacaaaccaccacacttagatgatgaaatcacaaagaaaaaaaacctagatctatgtgaaaatcactt 25631661  T
Q  210 atttagattgaaatagaga 228  Q
    |||||||||||||||||||    
T  25631662 atttagattgaaatagaga 25631680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 112 - 228
Target Start/End: Complemental strand, 4172605 - 4172488
Alignment:
Q  112 gaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaaacctcgaagaaaaaatc-tagatatatgtgaaaactcctta 210  Q
    ||||| ||||||| |||||||||||| |||| |||| | |||||||| |||| ||| ||| | | ||||||||| | ||||| ||||||||||   ||||    
T  4172605 gaaatgaaacaacaccgcacaagacgacgaaaaacaaaccaccacacttagatgatgaaatcacaaagaaaaaaacctagatctatgtgaaaatcactta 4172506  T
Q  211 tttagattgaaatagaga 228  Q
    ||||||||||||||||||    
T  4172505 tttagattgaaatagaga 4172488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 31794220 - 31794063
Alignment:
Q  1 attaaagtgacatgaatgctcatgccaccagatctgcaatgttgatgtccaagtcgtttactgaatagaagatctttcaataggaaccaaataaacacca 100  Q
    |||||| ||||  |||| |||||||| ||  |||||||| ||||||| |||| || || | ||||||   |||||||||||| ||| ||||| ||||||     
T  31794220 attaaactgaccggaatactcatgcctccgaatctgcaacgttgatgcccaaatctttgattgaataatcgatctttcaatatgaatcaaatgaacaccg 31794121  T
Q  101 aaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacac 158  Q
     ||||| ||   ||||||||||||||||||||| ||| ||||||||||| ||| ||||    
T  31794120 caacaagatagaaaatcaaacaacgccgcacaaaacgacgaacaacacaccactacac 31794063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 21488243 - 21488078
Alignment:
Q  1 attaaagtgacatgaatgctcatgccacc---agatctgcaatgttgatgtccaagtcgtttactgaatagaagatctttcaataggaaccaaataaaca 97  Q
    |||||||||||  ||||||||||||| ||   |||||| ||| ||||| | |||| || || | ||||||   ||| |||||||| ||| ||||||||||    
T  21488243 attaaagtgactagaatgctcatgcctcctccagatctacaacgttgacgcccaaatctttgattgaataatcgatttttcaatatgaatcaaataaaca 21488144  T
Q  98 ccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctaga 163  Q
    ||  || || | | |||||||||||||||||||||||||| | ||||||| | |||||||| ||||    
T  21488143 ccgcaagaagacgggaaatcaaacaacgccgcacaagacgacaaacaacataccaccacacttaga 21488078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 112 - 224
Target Start/End: Complemental strand, 32607507 - 32607393
Alignment:
Q  112 gaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaaacctcgaag--aaaaaatctagatatatgtgaaaactcctt 209  Q
    |||||||||||||||| ||||||||| ||||||||| | |||||||| |||| ||| |||   | |||  |||||| |||||| ||||||||||   |||    
T  32607507 gaaatcaaacaacgccacacaagacgacgaacaacaaatcaccacacttagatgatgaaattacaaagaaaaaaaacctagatctatgtgaaaatcactt 32607408  T
Q  210 atttagattgaaata 224  Q
    |||||||||||||||    
T  32607407 atttagattgaaata 32607393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 113 - 228
Target Start/End: Original strand, 39917434 - 39917549
Alignment:
Q  113 aaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaaacctcgaagaaaaaatctagatatatgtgaaaactccttatt 212  Q
    ||||||||||||| || |||||||  ||||||||| | |||||||| |||| ||| ||| | | | ||||||| |||||| ||||||||||   ||||||    
T  39917434 aaatcaaacaacgtcgtacaagacaacgaacaacaaaccaccacacttagatgatgaaatcacaaggaaaaaacctagatctatgtgaaaatcacttatt 39917533  T
Q  213 tagattgaaatagaga 228  Q
    ||||||||| ||||||    
T  39917534 tagattgaattagaga 39917549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 115 - 228
Target Start/End: Complemental strand, 17237840 - 17237724
Alignment:
Q  115 atcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaaacctc---gaagaaaaaatctagatatatgtgaaaactccttat 211  Q
    ||||||||||||||||||||||| | ||||||| | |||||||| |||| ||| ||| | |   ||| |||||| ||| || ||||||||||   |||||    
T  17237840 atcaaacaacgccgcacaagacgacaaacaacaaaccaccacacttagatgatgaaatcacaaagaaaaaaaaacctaaatctatgtgaaaatcacttat 17237741  T
Q  212 ttagattgaaatagaga 228  Q
    |||||||||||||||||    
T  17237740 ttagattgaaatagaga 17237724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 71 - 228
Target Start/End: Complemental strand, 22803101 - 22802943
Alignment:
Q  71 gatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaa 170  Q
    |||||||||||| ||| ||||| ||||||  ||| | | ||||||||||||||||||||| |||||| ||||||||| | | ||||||  | | ||  ||    
T  22803101 gatctttcaatatgaatcaaatgaacaccgcaacgatacgagaaatcaaacaacgccgcataagacgacgaacaacaaaccgccacactcaaatgacgaa 22803002  T
Q  171 acctcgaagaaaaaatctagatatatgtgaaaactc-cttatttagattgaaatagaga 228  Q
    | | |  ||| |||| |||||| || ||||||| || ||||||||||||||||||||||    
T  22803001 agcacatagagaaaacctagatctacgtgaaaaatcacttatttagattgaaatagaga 22802943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 71 - 149
Target Start/End: Complemental strand, 29239404 - 29239326
Alignment:
Q  71 gatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacaca 149  Q
    |||||| ||||| ||||||||  ||||||| ||||| | | ||||||||||| |||||||||||||| |||||||||||    
T  29239404 gatcttccaatacgaaccaaacgaacaccacaacaagacgtgaaatcaaacagcgccgcacaagacgacgaacaacaca 29239326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 71 - 224
Target Start/End: Complemental strand, 36906201 - 36906047
Alignment:
Q  71 gatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaa 170  Q
    |||||||||||| ||| ||||| ||||| | |  || | | |||||||||||||||||||||||||| ||||||||| | |||||||| |||| ||| ||    
T  36906201 gatctttcaatatgaatcaaatgaacactacacgaagacgggaaatcaaacaacgccgcacaagacgacgaacaacaaatcaccacacttagatgatgaa 36906102  T
Q  171 acctcgaag-aaaaaatctagatatatgtgaaaactccttatttagattgaaata 224  Q
    |   | ||| |||||| ||| || ||||||||||   |||||||| |||||||||    
T  36906101 attacaaagaaaaaaacctaaatctatgtgaaaatcacttatttatattgaaata 36906047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 112 - 228
Target Start/End: Complemental strand, 4178603 - 4178486
Alignment:
Q  112 gaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaaacctcgaag-aaaaaatctagatatatgtgaaaactcctta 210  Q
    ||||| ||||||||||||||||||||  ||| |||| | |||||||| |||| ||| ||| | | ||| |||||| |||||| ||| ||||||   ||||    
T  4178603 gaaatgaaacaacgccgcacaagacgatgaaaaacaaaccaccacacttagatgatgaaatcacaaagaaaaaaagctagatttatctgaaaatcactta 4178504  T
Q  211 tttagattgaaatagaga 228  Q
    ||||||||||||||||||    
T  4178503 tttagattgaaatagaga 4178486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 105 - 149
Target Start/End: Complemental strand, 16235449 - 16235405
Alignment:
Q  105 aaaatgagaaatcaaacaacgccgcacaagacgccgaacaacaca 149  Q
    |||||| |||||||||||||||||||||||||| |||||||||||    
T  16235449 aaaatgcgaaatcaaacaacgccgcacaagacggcgaacaacaca 16235405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 71 - 202
Target Start/End: Original strand, 30648714 - 30648846
Alignment:
Q  71 gatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaa 170  Q
    |||||||||||| |||  |||| ||||||  || || ||| |||| |||||||| |||||||||||| ||||||||| | |||||||| |||| ||| ||    
T  30648714 gatctttcaatatgaataaaatgaacaccgcaagaagatgggaaagcaaacaacaccgcacaagacgacgaacaacaaaccaccacacttagatgatgaa 30648813  T
Q  171 acctcgaag-aaaaaatctagatatatgtgaaa 202  Q
    | | | ||| |||||| |||||| |||||||||    
T  30648814 atcacaaagaaaaaaaactagatctatgtgaaa 30648846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 71 - 163
Target Start/End: Original strand, 35499193 - 35499285
Alignment:
Q  71 gatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctaga 163  Q
    |||||||||||| ||| ||||| ||||||  |  || | | |||||||||||||||||||||||||| ||||||||| | |||||||| ||||    
T  35499193 gatctttcaatatgaatcaaatgaacaccgcacaaagacgggaaatcaaacaacgccgcacaagacgacgaacaacaaatcaccacacttaga 35499285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 71 - 149
Target Start/End: Complemental strand, 51487171 - 51487089
Alignment:
Q  71 gatctttcaataggaaccaaataaacaccaaa--acaaaa--tgagaaatcaaacaacgccgcacaagacgccgaacaacaca 149  Q
    |||||||||||| |||||||| |||||||| |  ||||||  |  |||||||||||||||||||||||||| |||||||||||    
T  51487171 gatctttcaatatgaaccaaaaaaacaccacacaacaaaagatacgaaatcaaacaacgccgcacaagacgacgaacaacaca 51487089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 72 - 151
Target Start/End: Original strand, 26739385 - 26739464
Alignment:
Q  72 atctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacacagc 151  Q
    |||||||||||||||||||| | ||| || ||||| |||  ||||||||| ||||||||||||||   ||||||||||||    
T  26739385 atctttcaataggaaccaaacagacatcacaacaagatgcaaaatcaaacgacgccgcacaagacaatgaacaacacagc 26739464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 70 - 171
Target Start/End: Original strand, 52923143 - 52923241
Alignment:
Q  70 agatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataa 169  Q
    ||||||||||| ||||||  || |||||||   |||||| | ||||||||||   ||||||||||||| ||||||||||||| |||||| ||||||| ||    
T  52923143 agatctttcaagaggaactgaacaaacaccgcgacaaaacgcgaaatcaaac---gccgcacaagacgacgaacaacacagcgccacacttagacgacaa 52923239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 149
Target Start/End: Original strand, 36734635 - 36734765
Alignment:
Q  19 ctcatgccaccagatctgcaatgttgatgtccaagtcgtttactgaatagaagatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatca 118  Q
    |||||||| |||||||||||| ||||| | |||| || || | | ||||   ||||||||| || ||| ||||| ||||||  || || | |  ||||||    
T  36734635 ctcatgcctccagatctgcaacgttgacgcccaaatctttgattcaataatcgatctttcattatgaatcaaatgaacaccgcaataagacggaaaatca 36734734  T
Q  119 aacaacgccgcacaagacgccgaacaacaca 149  Q
    ||||||||||||||||||| |||||||||||    
T  36734735 aacaacgccgcacaagacgacgaacaacaca 36734765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 113 - 163
Target Start/End: Complemental strand, 42719554 - 42719504
Alignment:
Q  113 aaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctaga 163  Q
    ||||||||||||||||||||||||| ||||||||| | |||||||| ||||    
T  42719554 aaatcaaacaacgccgcacaagacgacgaacaacaaaccaccacacttaga 42719504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 71 - 185
Target Start/End: Original strand, 51202249 - 51202363
Alignment:
Q  71 gatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaa 170  Q
    |||||||||||| ||| ||||| ||||||  |  |  ||| |||||||||||||||||||||||||| | ||||||| | |||||||| |||| ||| ||    
T  51202249 gatctttcaatatgaatcaaatgaacaccgcacgacgatgggaaatcaaacaacgccgcacaagacgacaaacaacaaaccaccacacttagatgatgaa 51202348  T
Q  171 acctcgaagaaaaaa 185  Q
    | | | |||||||||    
T  51202349 atcacaaagaaaaaa 51202363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 112 - 149
Target Start/End: Complemental strand, 7546630 - 7546593
Alignment:
Q  112 gaaatcaaacaacgccgcacaagacgccgaacaacaca 149  Q
    |||||||||||||||||||||||||| |||||||||||    
T  7546630 gaaatcaaacaacgccgcacaagacgacgaacaacaca 7546593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 118 - 228
Target Start/End: Original strand, 38855078 - 38855190
Alignment:
Q  118 aaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaaacctcgaagaaaa--aatctagatatatgtgaaaactccttatttag 215  Q
    |||||||||| ||||||||  ||||||||| | || ||||| |||| ||| ||| | | |||||||  ||||||||| ||||||||||   |||||||||    
T  38855078 aaacaacgccacacaagacaacgaacaacaaaccatcacacttagatgatgaaatcacaaagaaaaaaaatctagatctatgtgaaaatcacttatttag 38855177  T
Q  216 attgaaatagaga 228  Q
    ||||| |||||||    
T  38855178 attgatatagaga 38855190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 71 - 149
Target Start/End: Original strand, 27706253 - 27706335
Alignment:
Q  71 gatctttcaataggaaccaaataaacacc--aaaacaaaa--tgagaaatcaaacaacgccgcacaagacgccgaacaacaca 149  Q
    |||||||||||| ||||||||  ||||||  | |||||||  || ||||| |||||||||||||||||||| |||||||||||    
T  27706253 gatctttcaatacgaaccaaacgaacaccgcacaacaaaagatgcgaaattaaacaacgccgcacaagacgacgaacaacaca 27706335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 177 - 228
Target Start/End: Original strand, 38440679 - 38440730
Alignment:
Q  177 aagaaaaaatctagatatatgtgaaaactccttatttagattgaaatagaga 228  Q
    ||||||||| |||||| ||||||||||   ||||||||||||||||||||||    
T  38440679 aagaaaaaacctagatctatgtgaaaatcacttatttagattgaaatagaga 38440730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 112 - 224
Target Start/End: Original strand, 44907435 - 44907548
Alignment:
Q  112 gaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaaacctcgaag--aaaaaatctagatatatgtgaaaactcctt 209  Q
    ||||||||||||||| |||||||||| ||||||||| | |||||||| |||| ||| |||   | |||  |||||| |||||| ||||||||||   |||    
T  44907435 gaaatcaaacaacgc-gcacaagacgacgaacaacaaatcaccacacttagatgatgaaattacaaagaaaaaaaacctagatctatgtgaaaatcactt 44907533  T
Q  210 atttagattgaaata 224  Q
     ||||||||||||||    
T  44907534 gtttagattgaaata 44907548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 71 - 149
Target Start/End: Complemental strand, 3606837 - 3606759
Alignment:
Q  71 gatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacaca 149  Q
    |||||||||||||  ||||||  ||||||| ||||| | | || |||| |||||||| ||||||||| |||||||||||    
T  3606837 gatctttcaatagataccaaacgaacaccacaacaagacgggatatcatacaacgccacacaagacgacgaacaacaca 3606759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 71 - 149
Target Start/End: Original strand, 7805511 - 7805589
Alignment:
Q  71 gatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacaca 149  Q
    ||||||| | |||||||||||||||||||| |  || ||| |||| ||||||| |||| | |||||| |||||||||||    
T  7805511 gatcttttagtaggaaccaaataaacaccacattaacatgcgaaaacaaacaatgccgtataagacgacgaacaacaca 7805589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 70 - 166
Target Start/End: Complemental strand, 9998529 - 9998436
Alignment:
Q  70 agatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacga 166  Q
    ||||||||||| |||||| ||| |||||||   |||||| | ||||||||||   ||||||||||||| ||||||||||| | || ||| |||||||    
T  9998529 agatctttcaagaggaactaaacaaacaccgcgacaaaacgcgaaatcaaac---gccgcacaagacgacgaacaacacaacgccgcacttagacga 9998436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 71 - 149
Target Start/End: Complemental strand, 41818272 - 41818195
Alignment:
Q  71 gatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacaca 149  Q
    ||||||||||||||||| |||  |||| || ||||| | | ||||||||||||  |||||||||||| |||||||||||    
T  41818272 gatctttcaataggaac-aaacgaacatcacaacaagacgcgaaatcaaacaataccgcacaagacgacgaacaacaca 41818195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 176 - 228
Target Start/End: Complemental strand, 37169205 - 37169152
Alignment:
Q  176 gaagaaaaaatctagatatatgtgaaaactc-cttatttagattgaaatagaga 228  Q
    ||||||||||||||||| |||||||||| || |||||||| |||||| ||||||    
T  37169205 gaagaaaaaatctagatctatgtgaaaaatcacttatttatattgaattagaga 37169152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 70 - 166
Target Start/End: Complemental strand, 40487388 - 40487294
Alignment:
Q  70 agatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacga 166  Q
    ||||||||||||||||||  || |||||||   |||| | | |||||||||  ||||||||||||||| ||||||||||| | || ||| |||||||    
T  40487388 agatctttcaataggaactgaacaaacaccgcgacaagacgcgaaatcaaa--acgccgcacaagacgacgaacaacacaacgccgcacttagacga 40487294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 149
Target Start/End: Complemental strand, 42460766 - 42460729
Alignment:
Q  112 gaaatcaaacaacgccgcacaagacgccgaacaacaca 149  Q
    ||||||||||||||||||||||||||  ||||||||||    
T  42460766 gaaatcaaacaacgccgcacaagacgatgaacaacaca 42460729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 182 - 222
Target Start/End: Complemental strand, 1649364 - 1649324
Alignment:
Q  182 aaaatctagatatatgtgaaaactccttatttagattgaaa 222  Q
    ||||||| |||||||||||||||  ||||||||||||||||    
T  1649364 aaaatcttgatatatgtgaaaaccacttatttagattgaaa 1649324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 113 - 149
Target Start/End: Complemental strand, 8914727 - 8914691
Alignment:
Q  113 aaatcaaacaacgccgcacaagacgccgaacaacaca 149  Q
    |||||||||| |||||||||||||| |||||||||||    
T  8914727 aaatcaaacagcgccgcacaagacgacgaacaacaca 8914691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 190 - 222
Target Start/End: Original strand, 35865086 - 35865118
Alignment:
Q  190 gatatatgtgaaaactccttatttagattgaaa 222  Q
    |||||||||||||||| ||||||||||||||||    
T  35865086 gatatatgtgaaaactacttatttagattgaaa 35865118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 122 - 166
Target Start/End: Original strand, 43488665 - 43488709
Alignment:
Q  122 aacgccgcacaagacgccgaacaacacagcaccacacctagacga 166  Q
    |||||||||||||||| ||||||||||| | |||||| |||||||    
T  43488665 aacgccgcacaagacgacgaacaacacaacgccacacttagacga 43488709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 54; Significance: 9e-22; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 31 - 228
Target Start/End: Original strand, 19280900 - 19281097
Alignment:
Q  31 gatctgcaatgttgatgtccaagtcgtttactgaatagaagatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgca 130  Q
    ||||||||| ||||| |||||| || || | ||||||   ||||||||||||||||  |||| |||||   || || |||  ||| |||||||||| |||    
T  19280900 gatctgcaacgttgacgtccaaatctttgattgaataatcgatctttcaataggaataaaatgaacactgcaagaagatggaaaagcaaacaacgctgca 19280999  T
Q  131 caagacgccgaacaacacagcaccacacctagacgataaaacctcgaagaaaaaatctagatatatgtgaaaactccttatttagattgaaatagaga 228  Q
    ||||||| ||||||||| | |||||||| |||| ||| ||| | | ||||||||| |||||||| |||||||    ||||||||||||||||||||||    
T  19281000 caagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaaaaaacctagatatgtgtgaaagtcacttatttagattgaaatagaga 19281097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 31 - 228
Target Start/End: Original strand, 7150290 - 7150488
Alignment:
Q  31 gatctgcaatgttgatgtccaagtcgtttactgaatagaagatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgca 130  Q
    ||||||||| ||||| |||||| || || | ||||||   ||||||||||| ||||  |||| ||||||  || || | | |||| ||||||||||||||    
T  7150290 gatctgcaacgttgacgtccaaatctttgattgaataattgatctttcaatgggaataaaatgaacaccgcaagaagacgggaaagcaaacaacgccgca 7150389  T
Q  131 caagacgccgaacaacacagcaccacacctagacgataaaacctcgaagaaaaaatc-tagatatatgtgaaaactccttatttagattgaaatagaga 228  Q
    ||||||| ||||||||| | |||||||| |||| ||| ||| | | ||||||||| | ||||| |||||||||    ||||||||||||||||||||||    
T  7150390 caagacgacgaacaacaaaccaccacacttagatgatgaaagcacaaagaaaaaaacttagatctatgtgaaagtcacttatttagattgaaatagaga 7150488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 76 - 224
Target Start/End: Complemental strand, 30298287 - 30298139
Alignment:
Q  76 ttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaaacctc 175  Q
    ||||||| ||| ||||||||||||  || || | |  |||||||||| |||||||||||||| ||||||||| | |||||||| |||| ||| ||| |      
T  30298287 ttcaatatgaatcaaataaacaccgcaagaagacggaaaatcaaacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcat 30298188  T
Q  176 gaagaaaaaatctagatatatgtgaaaactccttatttagattgaaata 224  Q
     ||||||||| |||||| ||||||||||   ||||||||||||||||||    
T  30298187 aaagaaaaaacctagatctatgtgaaaatcacttatttagattgaaata 30298139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 72 - 224
Target Start/End: Original strand, 36344487 - 36344638
Alignment:
Q  72 atctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaaa 171  Q
    ||||||||||| ||| ||||| ||||||  || |||| |  ||||||||||||||||||||||||| ||||||||| | |||||||| |||| ||| |||    
T  36344487 atctttcaatatgaatcaaatgaacaccgcaaaaaaacggaaaatcaaacaacgccgcacaagacgacgaacaacaaaccaccacacttagatgat-aaa 36344585  T
Q  172 cctcgaagaaaaaatctagatatatgtgaaaactccttatttagattgaaata 224  Q
     | | |||||||||  |||||  |||||||||   ||||||||||||||||||    
T  36344586 tcacaaagaaaaaacttagatccatgtgaaaataacttatttagattgaaata 36344638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 112 - 228
Target Start/End: Complemental strand, 42886521 - 42886406
Alignment:
Q  112 gaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaaacctcgaagaaaaaatctagatatatgtgaaaactccttat 211  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||||  ||| ||| ||| | ||||| ||||| ||| || ||||||||||   |||||    
T  42886521 gaaatcaaacaacgccgcacaagacgacgaacaacacaccaccacactcagatgatgaaatcacgaag-aaaaacctaaatctatgtgaaaagcacttat 42886423  T
Q  212 ttagattgaaatagaga 228  Q
    || ||||||||||||||    
T  42886422 tttgattgaaatagaga 42886406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 113 - 228
Target Start/End: Complemental strand, 16981332 - 16981217
Alignment:
Q  113 aaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaaacctcgaagaaaaaatctagatatatgtgaaaactccttatt 212  Q
    |||| |||||| ||||||||||||| ||||||||| | |||| ||| |||| ||| ||| | | ||||||||| ||||||||||||| |||   ||||||    
T  16981332 aaattaaacaatgccgcacaagacgacgaacaacaaaccaccgcacttagatgatgaaatcacaaagaaaaaacctagatatatgtgtaaatcacttatt 16981233  T
Q  213 tagattgaaatagaga 228  Q
    ||||||||||||||||    
T  16981232 tagattgaaatagaga 16981217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 71 - 226
Target Start/End: Complemental strand, 28235669 - 28235514
Alignment:
Q  71 gatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaa 170  Q
    |||||||||||| |||  |||| ||||||  || || |||  ||||||||||||||||||||||||| |  |||||| | || ||||| |||| ||| ||    
T  28235669 gatctttcaataagaataaaatgaacaccgcaagaagatggaaaatcaaacaacgccgcacaagacgacagacaacaaaccatcacacttagatgatgaa 28235570  T
Q  171 acctcgaagaaaaaatctagatatatgtgaaaactccttatttagattgaaataga 226  Q
    | | | |||||||||||||||| ||||||||||   ||||||||||| ||||||||    
T  28235569 atcacaaagaaaaaatctagatctatgtgaaaatcacttatttagatcgaaataga 28235514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 110 - 229
Target Start/End: Original strand, 35475371 - 35475490
Alignment:
Q  110 gagaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaaacctcgaagaaaaaatctagatatatgtgaaaactcctt 209  Q
    ||||||||||||| ||||||| || ||| ||||||||| | |||||||| || | ||| ||| | | |||||||||||||||| ||||||||||   |||    
T  35475371 gagaaatcaaacagcgccgcataaaacgacgaacaacaaaccaccacacgtaaatgatgaaatcacaaagaaaaaatctagatctatgtgaaaatcactt 35475470  T
Q  210 atttagattgaaatagagat 229  Q
    ||||||||||||||| ||||    
T  35475471 atttagattgaaatatagat 35475490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 75 - 229
Target Start/End: Original strand, 43261818 - 43261971
Alignment:
Q  75 tttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaaacct 174  Q
    |||||||| ||| ||||||||||||  || || | |  |||||||||||| ||||| |||||| ||||||||| | |||||||| |||| ||||||| |     
T  43261818 tttcaatatgaatcaaataaacaccgcaagaagacggaaaatcaaacaacaccgcataagacgacgaacaacaaaccaccacacttagatgataaaatca 43261917  T
Q  175 cgaagaaaaaatctagatatatgtgaaaactccttatttagattgaaatagagat 229  Q
    | |||  |||| |||||| ||||||||||   |||||||||||||||||||||||    
T  43261918 caaag-gaaaacctagatctatgtgaaaatcacttatttagattgaaatagagat 43261971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 71 - 228
Target Start/End: Original strand, 7613053 - 7613209
Alignment:
Q  71 gatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaa 170  Q
    |||||||||||| ||| ||||| ||||||  ||||| | |||||||||||||||   |||||||||| ||||||||||| ||||||||  ||| || |||    
T  7613053 gatctttcaatatgaatcaaatgaacaccgcaacaagacgagaaatcaaacaacattgcacaagacgacgaacaacacaccaccacactcagatgacaaa 7613152  T
Q  171 acctcgaagaaaaaatctagatatatgtgaaaactccttatttagattgaaatagaga 228  Q
    | |  |||| ||||| |||||| ||| ||||||   |||||||||||||||| |||||    
T  7613153 atcatgaag-aaaaacctagatctatatgaaaaacacttatttagattgaaacagaga 7613209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 71 - 228
Target Start/End: Original strand, 27266854 - 27267013
Alignment:
Q  71 gatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaa 170  Q
    |||||||||||| ||| ||||| ||||||  |  || | | |||||||||||  ||||||||||||| ||||||||| | |||||||| |||| ||| ||    
T  27266854 gatctttcaatatgaatcaaatgaacaccgcacgaagacgggaaatcaaacagtgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaa 27266953  T
Q  171 acctcgaag--aaaaaatctagatatatgtgaaaactccttatttagattgaaatagaga 228  Q
    | | | |||  |||||| |||||| ||||||||||   ||||||||||||||||||||||    
T  27266954 atcacaaagaaaaaaaacctagatctatgtgaaaatcacttatttagattgaaatagaga 27267013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 32 - 224
Target Start/End: Complemental strand, 30371849 - 30371655
Alignment:
Q  32 atctgcaatgttgatgtccaagtcgtttactgaatagaagatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcac 131  Q
    |||||||||||||| |||||| || || | |||| |   |||||||||||| |||  |||| ||||||  |  || ||| ||||||||||||||||||||    
T  30371849 atctgcaatgttgacgtccaaatctttgattgaacaatcgatctttcaatatgaattaaatgaacaccgcacgaagatgggaaatcaaacaacgccgcac 30371750  T
Q  132 aagacgccgaacaacacagcaccacacctagacgataaaacctcgaag--aaaaaatctagatatatgtgaaaactccttatttagattgaaata 224  Q
    |||| | ||||||||| | |||||||| |||| ||| |||   | |||  |||||| |||||| ||||||||||   ||||||||||||||||||    
T  30371749 aagatgacgaacaacaaatcaccacacttagatgatgaaattacaaagaaaaaaaacctagatctatgtgaaaatcacttatttagattgaaata 30371655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 71 - 224
Target Start/End: Original strand, 2057833 - 2057987
Alignment:
Q  71 gatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaa 170  Q
    |||||||||||| ||| ||||| ||||||  |  || | | |||||||||||||||||| ||||||| ||||||||| | |||||||| |||| ||| ||    
T  2057833 gatctttcaatatgaatcaaatgaacaccgcacgaagacgggaaatcaaacaacgccgcgcaagacgacgaacaacaaaccaccacacttagatgatgaa 2057932  T
Q  171 acctcgaag-aaaaaatctagatatatgtgaaaactccttatttagattgaaata 224  Q
    | |   ||| |||||| |||||| ||||||||||   ||||||||||||||||||    
T  2057933 atcataaagaaaaaaacctagatctatgtgaaaatcacttatttagattgaaata 2057987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 71 - 228
Target Start/End: Complemental strand, 43148815 - 43148657
Alignment:
Q  71 gatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaa 170  Q
    ||||||||||||||||  |||| |||| |  || || | | |||| |||||||| |||||||||||| ||||||||| | |||||||| |||| ||| ||    
T  43148815 gatctttcaataggaataaaatgaacaacgcaagaagacgggaaagcaaacaacaccgcacaagacgacgaacaacaaaccaccacacttagatgatgaa 43148716  T
Q  171 acctcgaag-aaaaaatctagatatatgtgaaaactccttatttagattgaaatagaga 228  Q
    | | | ||| |||||||||| ||||||||||||    ||||||||||| ||||||||||    
T  43148715 atcacaaagaaaaaaatctaaatatatgtgaaagtcacttatttagatcgaaatagaga 43148657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 112 - 224
Target Start/End: Original strand, 21060318 - 21060430
Alignment:
Q  112 gaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaaacctcgaagaaaaaatctagatatatgtgaaaactccttat 211  Q
    ||||||||| |  ||||||||||||| ||||||||| | |||||||| |||| ||| | | | ||||||||||| ||| || ||||||||||   |||||    
T  21060318 gaaatcaaaaagtgccgcacaagacgacgaacaacaaaccaccacacttagatgatgacatcacgaagaaaaaacctacatctatgtgaaaatcacttat 21060417  T
Q  212 ttagattgaaata 224  Q
    |||||||||||||    
T  21060418 ttagattgaaata 21060430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 122 - 228
Target Start/End: Complemental strand, 7246992 - 7246885
Alignment:
Q  122 aacgccgcacaagacgccgaacaacacagcaccacacctagacgataaaacctcgaag-aaaaaatctagatatatgtgaaaactccttatttagattga 220  Q
    |||||||||||||||| ||||||||| | |||||||| |||| ||| ||| | | ||| |||||| |||||| |||||||||    ||||||||||||||    
T  7246992 aacgccgcacaagacgacgaacaacaaatcaccacacttagatgatgaaatcacaaagaaaaaaacctagatctatgtgaaagtcacttatttagattga 7246893  T
Q  221 aatagaga 228  Q
    ||||||||    
T  7246892 aatagaga 7246885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 113 - 228
Target Start/End: Original strand, 18677502 - 18677619
Alignment:
Q  113 aaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaaacctcgaag--aaaaaatctagatatatgtgaaaactcctta 210  Q
    ||||||||||||| | ||||||||| ||||||||| | |||||||| |||| ||| ||| | | |||  |||||| |||||| ||||||||||   ||||    
T  18677502 aaatcaaacaacgtcccacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaaaaaaaacctagatctatgtgaaaatcactta 18677601  T
Q  211 tttagattgaaatagaga 228  Q
    |||||||| |||||||||    
T  18677602 tttagattaaaatagaga 18677619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 114 - 228
Target Start/End: Original strand, 19259849 - 19259966
Alignment:
Q  114 aatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaaacctcgaag--aaaaaatctagatatatgtgaaaactc-ctta 210  Q
    ||||||||||| |||||||||||| ||||||||| | |||||||| |||| ||| ||| | |  ||  ||||||  ||||| |||||||||| || ||||    
T  19259849 aatcaaacaacaccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacagagaaaaaaaacttagatctatgtgaaaaatcactta 19259948  T
Q  211 tttagattgaaatagaga 228  Q
    ||||||||||||||||||    
T  19259949 tttagattgaaatagaga 19259966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 71 - 185
Target Start/End: Complemental strand, 34881802 - 34881688
Alignment:
Q  71 gatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaa 170  Q
    |||||||||||| ||| ||||| ||||||  |  || | | |||||||||||||||||||||||||| ||||||||| | |||||||| |||| ||| ||    
T  34881802 gatctttcaatatgaatcaaatgaacaccgcacgaagacgggaaatcaaacaacgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaa 34881703  T
Q  171 acctcgaagaaaaaa 185  Q
    | | | |||||||||    
T  34881702 atcacaaagaaaaaa 34881688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 71 - 185
Target Start/End: Original strand, 41184435 - 41184549
Alignment:
Q  71 gatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaa 170  Q
    |||||||||||| ||| ||||  ||||||| |  || | | |||||||||||||||||||||||||| ||||||||| | |||||||| |||| ||| ||    
T  41184435 gatctttcaatatgaatcaaacgaacaccacacgaagacgggaaatcaaacaacgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaa 41184534  T
Q  171 acctcgaagaaaaaa 185  Q
    | | | |||||||||    
T  41184535 atcacaaagaaaaaa 41184549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 71 - 149
Target Start/End: Complemental strand, 14211288 - 14211206
Alignment:
Q  71 gatctttcaataggaaccaaataaacacc--aaaacaaa--atgagaaatcaaacaacgccgcacaagacgccgaacaacaca 149  Q
    |||||||||||| ||||||||  ||||||  | ||||||  ||| |||||||||||||||||||||||||| |||||||||||    
T  14211288 gatctttcaatacgaaccaaacgaacaccgcacaacaaaggatgcgaaatcaaacaacgccgcacaagacgacgaacaacaca 14211206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 122 - 228
Target Start/End: Complemental strand, 7241816 - 7241709
Alignment:
Q  122 aacgccgcacaagacgccgaacaacacagcaccacacctagacgataaaacctcgaag-aaaaaatctagatatatgtgaaaactccttatttagattga 220  Q
    |||||||||||||||| ||||||||| | |||||||  |||| ||| ||| | | ||| |||||| |||||| |||||||||    ||||||||||||||    
T  7241816 aacgccgcacaagacgacgaacaacaaatcaccacaattagatgatgaaatcacaaagaaaaaaacctagatctatgtgaaagtcacttatttagattga 7241717  T
Q  221 aatagaga 228  Q
    ||||||||    
T  7241716 aatagaga 7241709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 72 - 149
Target Start/End: Original strand, 28540934 - 28541015
Alignment:
Q  72 atctttcaataggaaccaaataaacaccaaa--acaaa--atgagaaatcaaacaacgccgcacaagacgccgaacaacaca 149  Q
    ||||||||||| ||||||||  ||||||| |  |||||  ||| |||||||||||||||||||||||||| |||||||||||    
T  28540934 atctttcaatacgaaccaaacgaacaccacacaacaaatgatgcgaaatcaaacaacgccgcacaagacgacgaacaacaca 28541015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 76 - 158
Target Start/End: Complemental strand, 15570988 - 15570907
Alignment:
Q  76 ttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacac 158  Q
    ||||||| ||| ||||| ||||||| ||||| ||| ||| ||||||||| ||||| |||||| ||||||||||| ||||||||    
T  15570988 ttcaatatgaatcaaatgaacaccacaacaatatgggaa-tcaaacaacaccgcataagacgacgaacaacacaccaccacac 15570907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 71 - 218
Target Start/End: Complemental strand, 13421994 - 13421850
Alignment:
Q  71 gatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaa 170  Q
    ||||||||||||||||| |||| ||||| |  |||| | | ||||||||| |   |||||||||||| ||||||||||| || ||||| ||||||| |||    
T  13421994 gatctttcaataggaactaaatgaacacaacgacaatacgcgaaatcaaata---ccgcacaagacgacgaacaacacaacatcacacttagacgaaaaa 13421898  T
Q  171 acctcgaagaaaaaatctagatatatgtgaaaactccttatttagatt 218  Q
    | | | || | |||| ||  ||||||| ||||||  ||||||||||||    
T  13421897 atcacaaaaagaaaaactttatatatgggaaaaccacttatttagatt 13421850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 112 - 224
Target Start/End: Complemental strand, 781432 - 781320
Alignment:
Q  112 gaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaaacctcgaagaaaaaatctagatatatgtgaaaactccttat 211  Q
    |||||||||||  |||||||| |||| ||||||||| | ||||| || |||| ||| ||| | | ||||||||  |||||| ||| ||||||   |||||    
T  781432 gaaatcaaacagtgccgcacatgacgacgaacaacaaaccaccatacttagatgatgaaatcacaaagaaaaaccctagatctatctgaaaatcacttat 781333  T
Q  212 ttagattgaaata 224  Q
    |||||||||||||    
T  781332 ttagattgaaata 781320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 113 - 185
Target Start/End: Complemental strand, 42579930 - 42579858
Alignment:
Q  113 aaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaaacctcgaagaaaaaa 185  Q
    ||||||||||||| ||||||||||| ||||||||| | |||||||| |||| ||| ||| | | |||||||||    
T  42579930 aaatcaaacaacgtcgcacaagacgacgaacaacaaatcaccacacttagatgatgaaatcacaaagaaaaaa 42579858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 70 - 167
Target Start/End: Original strand, 6012164 - 6012258
Alignment:
Q  70 agatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgat 167  Q
    |||||||| |||||||||  || |||||||   |||||| | ||||||||||   ||||||||||||| ||||||||||| |||| ||| ||||||||    
T  6012164 agatcttttaataggaactgaacaaacaccgcgacaaaacgcgaaatcaaac---gccgcacaagacgacgaacaacacaacaccgcacttagacgat 6012258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 113 - 228
Target Start/End: Original strand, 7886975 - 7887090
Alignment:
Q  113 aaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaaacctcgaagaaaaaatctagatatatgtgaaaactccttatt 212  Q
    ||||||||||| |  | |||||||| ||||||||| | |||||||| |||| ||| ||| |   |||||||||  ||||| ||||||||||   ||||||    
T  7886975 aaatcaaacaatgttgtacaagacgacgaacaacaaaccaccacacttagatgatgaaatcaaaaagaaaaaacatagatttatgtgaaaatcacttatt 7887074  T
Q  213 tagattgaaatagaga 228  Q
    |||||| |||||||||    
T  7887075 tagattaaaatagaga 7887090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 113 - 147
Target Start/End: Complemental strand, 10649686 - 10649652
Alignment:
Q  113 aaatcaaacaacgccgcacaagacgccgaacaaca 147  Q
    ||||||||||||||||||||||||| |||||||||    
T  10649686 aaatcaaacaacgccgcacaagacgacgaacaaca 10649652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 88 - 158
Target Start/End: Original strand, 19983367 - 19983437
Alignment:
Q  88 caaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacac 158  Q
    ||||| ||||||| ||||| | || ||| | |||||||||||||||| || ||||||||||||| ||||||    
T  19983367 caaatgaacaccacaacaagacgaaaaaactaacaacgccgcacaaggcgacgaacaacacagcgccacac 19983437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 112 - 154
Target Start/End: Original strand, 31802507 - 31802549
Alignment:
Q  112 gaaatcaaacaacgccgcacaagacgccgaacaacacagcacc 154  Q
    |||||||||||||||||||||||||  ||||||||||| ||||    
T  31802507 gaaatcaaacaacgccgcacaagacagcgaacaacacaacacc 31802549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 70 - 166
Target Start/End: Complemental strand, 38597859 - 38597766
Alignment:
Q  70 agatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacga 166  Q
    ||||||||||||||||||  || ||||||||  |||| | | ||||||||||   ||||||||||||| ||||||||||| | || ||| |||||||    
T  38597859 agatctttcaataggaactgaacaaacaccacgacaagacgcgaaatcaaac---gccgcacaagacgacgaacaacacaacgccgcacttagacga 38597766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 107 - 149
Target Start/End: Complemental strand, 39567323 - 39567281
Alignment:
Q  107 aatgagaaatcaaacaacgccgcacaagacgccgaacaacaca 149  Q
    |||| |||||||||||||||||||||||||  |||||||||||    
T  39567323 aatgcgaaatcaaacaacgccgcacaagacaacgaacaacaca 39567281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 72 - 149
Target Start/End: Original strand, 10332576 - 10332653
Alignment:
Q  72 atctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacaca 149  Q
    ||||||||||| ||| |||| ||||||   ||||| | | |||||||||||| ||||||||||||| | |||||||||    
T  10332576 atctttcaatatgaatcaaacaaacactgcaacaagacgcgaaatcaaacaatgccgcacaagacgacaaacaacaca 10332653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 149
Target Start/End: Original strand, 19103539 - 19103576
Alignment:
Q  112 gaaatcaaacaacgccgcacaagacgccgaacaacaca 149  Q
    |||||||||||||||||||||||||| | |||||||||    
T  19103539 gaaatcaaacaacgccgcacaagacgactaacaacaca 19103576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 149
Target Start/End: Complemental strand, 19349717 - 19349680
Alignment:
Q  112 gaaatcaaacaacgccgcacaagacgccgaacaacaca 149  Q
    ||||||||| |||||||||||||||| |||||||||||    
T  19349717 gaaatcaaataacgccgcacaagacgacgaacaacaca 19349680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 113 - 185
Target Start/End: Original strand, 3271439 - 3271511
Alignment:
Q  113 aaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaaacctcgaagaaaaaa 185  Q
    |||||||||||||| |||||||||| |||| |||| | |||||||| |||| ||| ||| | | |||||||||    
T  3271439 aaatcaaacaacgctgcacaagacgacgaataacaaaccaccacacttagatgatgaaatcacaaagaaaaaa 3271511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 180 - 228
Target Start/End: Original strand, 20257799 - 20257847
Alignment:
Q  180 aaaaaatctagatatatgtgaaaactccttatttagattgaaatagaga 228  Q
    |||||| |||||| ||||||||||   ||||||||||||||||||||||    
T  20257799 aaaaaacctagatctatgtgaaaatcacttatttagattgaaatagaga 20257847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 53; Significance: 4e-21; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 76 - 224
Target Start/End: Original strand, 201372 - 201520
Alignment:
Q  76 ttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaaacctc 175  Q
    ||||||| ||| ||||| ||||||| || || | | ||||||||||| |||||||||||||  ||||||||| | || ||||| |||| ||| ||| | |    
T  201372 ttcaatatgaatcaaatgaacaccacaagaagacgtgaaatcaaacagcgccgcacaagactacgaacaacaaaccatcacacttagatgatgaaatcac 201471  T
Q  176 gaagaaaaaatctagatatatgtgaaaactccttatttagattgaaata 224  Q
     |||||||||||||||| ||||||||||   ||||||||||||||||||    
T  201472 aaagaaaaaatctagatctatgtgaaaatcacttatttagattgaaata 201520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 21822 - 21866
Alignment:
Q  1 attaaagtgacatgaatgctcatgccaccagatctgcaatgttga 45  Q
    |||||| |||||||||| |||||||| || |||||||||||||||    
T  21822 attaaattgacatgaatactcatgcctccggatctgcaatgttga 21866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 72 - 149
Target Start/End: Original strand, 36683 - 36760
Alignment:
Q  72 atctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacaca 149  Q
    ||||||||||| ||||||||||| ||||| ||||| |  |||||||||||||| |||||||||||| |||||||||||    
T  36683 atctttcaatatgaaccaaataatcaccacaacaagaaaagaaatcaaacaactccgcacaagacgacgaacaacaca 36760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 75 - 149
Target Start/End: Complemental strand, 6088 - 6014
Alignment:
Q  75 tttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacaca 149  Q
    |||||||| ||||||||| ||||||  ||||| | | |||||||||||||||||||||||||| |||||||||||    
T  6088 tttcaatatgaaccaaatgaacaccgcaacaatacgcgaaatcaaacaacgccgcacaagacgacgaacaacaca 6014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0495 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0495
Description:

Target: scaffold0495; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 31 - 228
Target Start/End: Complemental strand, 5520 - 5322
Alignment:
Q  31 gatctgcaatgttgatgtccaagtcgtttactgaatagaagatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgca 130  Q
    ||||||||| ||||| |||||| || || | ||||||    |||||||||||| ||  |||| ||||||| || || | | |||| ||||||||||||||    
T  5520 gatctgcaacgttgacgtccaaatctttgattgaataatcaatctttcaatagaaataaaatgaacaccacaagaagacgggaaagcaaacaacgccgca 5421  T
Q  131 caagacgccgaacaacacagcaccacacctagacgataaaacctcgaagaaaaaatc-tagatatatgtgaaaactc-cttatttagattgaaatagaga 228  Q
    ||||||| ||||||||| | || ||||| || | ||| ||| | | ||||||||| | ||||||||||| |||| || ||||||||||||||| ||||||    
T  5420 caagacgacgaacaacaaaccatcacacttaaatgatgaaatcacaaagaaaaaaacatagatatatgt-aaaagtcacttatttagattgaagtagaga 5322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 115 - 228
Target Start/End: Original strand, 16359 - 16475
Alignment:
Q  115 atcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaaacctc---gaagaaaaaatctagatatatgtgaaaactccttat 211  Q
    ||||||||||||||||||||||| | ||||||| | |||||||| |||| ||| ||| | |   ||| |||||| ||| || ||||||||||   |||||    
T  16359 atcaaacaacgccgcacaagacgacaaacaacaaaccaccacacttagatgatgaaatcacaaagaaaaaaaaacctaaatctatgtgaaaatcacttat 16458  T
Q  212 ttagattgaaatagaga 228  Q
    |||||||||||||||||    
T  16459 ttagattgaaatagaga 16475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 112 - 228
Target Start/End: Original strand, 361835 - 361949
Alignment:
Q  112 gaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctagacgataaaacctcgaagaaaaaatctagatatatgtgaaaactccttat 211  Q
    |||||||||||||||||||||||||| ||||||||| | ||||| || || | ||| |||  ||  | |||||| |||  | |||||||||| | |||||    
T  361835 gaaatcaaacaacgccgcacaagacgacgaacaacaaaccaccatacttaaatgatgaaa--tcacaaaaaaaacctaactctatgtgaaaattacttat 361932  T
Q  212 ttagattgaaatagaga 228  Q
    |||||||||||||||||    
T  361933 ttagattgaaatagaga 361949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 141 - 229
Target Start/End: Complemental strand, 8731 - 8643
Alignment:
Q  141 aacaacacagcaccacacctagacgataaaacctcgaagaaaaaatctagatatatgtgaaaactccttatttagattgaaatagagat 229  Q
    ||||||| | |||||||| |||| ||| ||| | | ||||||||| |||||| ||||||||||   |||||||||||||||||||||||    
T  8731 aacaacaaaccaccacacttagatgatgaaatcacaaagaaaaaacctagatctatgtgaaaatcacttatttagattgaaatagagat 8643  T

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Target: scaffold0426 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0426
Description:

Target: scaffold0426; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 71 - 158
Target Start/End: Complemental strand, 6387 - 6300
Alignment:
Q  71 gatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacac 158  Q
    |||||||||||| ||| ||||| ||||||  || || | | |||||||||||| |||| |||||||| ||||||||| | ||||||||    
T  6387 gatctttcaatatgaatcaaatgaacaccgcaagaagacgggaaatcaaacaatgccgtacaagacgacgaacaacaaaccaccacac 6300  T

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Target: scaffold0042 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 71 - 158
Target Start/End: Original strand, 92523 - 92610
Alignment:
Q  71 gatctttcaataggaaccaaataaacaccaaaacaaaatgagaaatcaaacaacgccgcacaagacgccgaacaacacagcaccacac 158  Q
    |||||||||||| ||||||||  ||||||| ||||| | | |||||||||||||  |||||||||||  || ||||||| || |||||    
T  92523 gatctttcaatatgaaccaaacgaacaccacaacaagacgtgaaatcaaacaacatcgcacaagacggtgagcaacacaacaacacac 92610  T

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Target: scaffold0888 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0888
Description:

Target: scaffold0888; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 71 - 147
Target Start/End: Original strand, 1705 - 1785
Alignment:
Q  71 gatctttcaataggaaccaaataaacac--caaaacaaaa--tgagaaatcaaacaacgccgcacaagacgccgaacaaca 147  Q
    |||||||||||| ||||||||  |||||  || |||||||  || ||||||||||||||||| |||||||| |||||||||    
T  1705 gatctttcaatacgaaccaaacgaacactacacaacaaaagatgcgaaatcaaacaacgccggacaagacgacgaacaaca 1785  T

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Target: scaffold0264 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 113 - 163
Target Start/End: Original strand, 20433 - 20483
Alignment:
Q  113 aaatcaaacaacgccgcacaagacgccgaacaacacagcaccacacctaga 163  Q
    ||||||||||||| ||||||||||| ||||||||| | |||||||| ||||    
T  20433 aaatcaaacaacgtcgcacaagacgacgaacaacaaaccaccacacttaga 20483  T

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Target: scaffold0002 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 113 - 149
Target Start/End: Complemental strand, 453972 - 453936
Alignment:
Q  113 aaatcaaacaacgccgcacaagacgccgaacaacaca 149  Q
    ||||||||||||||||| ||||||| |||||||||||    
T  453972 aaatcaaacaacgccgcccaagacgacgaacaacaca 453936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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