View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3445-Insertion-11 (Length: 550)
Name: NF3445-Insertion-11
Description: NF3445
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3445-Insertion-11 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 527; Significance: 0; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 527; E-Value: 0
Query Start/End: Original strand, 8 - 550
Target Start/End: Original strand, 34141519 - 34142061
Alignment:
| Q |
8 |
atagtggcaagcattctgacaatttctgcggtacatgcaagttcaaatggtcaaaactcaaaacggatatagatagaagaatgagaaaccacgggccatt |
107 |
Q |
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| T |
34141519 |
atagtggcaagcattctgacaatttctgcggtacatgcaagttcaaatggtcaaaactcaaaacggatatagatagaagaatgagaaaccacgggccatt |
34141618 |
T |
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| Q |
108 |
taaaattacaacctaaatgagtagtgataaattttagcattcaatcagatggagaatgacaagctttcaaaatagaaaggaaaaacaaaataaagtgctg |
207 |
Q |
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| T |
34141619 |
taaaattacaacctaaatgagtagtgataaattttagcattcaatcagatggagaatgacaagctttcaaaatagaaaggaaaaacaaaataaagtgctg |
34141718 |
T |
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| Q |
208 |
ggctagatacaaccataaaccctgcccctacaatcccagtttgtaaggcaaaatcaatttataatataaataaactacaaaacaataacaatgtatataa |
307 |
Q |
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| T |
34141719 |
ggctagatacaaccataaaccctgctcctacaatcccagtttgtaaggcaaaatcaatttataacataaataaactacaaaacaataacaatgtatataa |
34141818 |
T |
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| Q |
308 |
cacaagcgcaaataggtatgttaatttcatacaagatcactgttatcagcgagcaccacacaggtcacagtttcatcttcattatactctttcttaataa |
407 |
Q |
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| T |
34141819 |
cacaagcgcaaataggtatgttaatttcatacaagatgactgttatcagcgagcaccacacaggtcacagtttcatcttcattatactctttcttaataa |
34141918 |
T |
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| Q |
408 |
taatctctggcggccctgcaatcaaaaggttaatgtaagcgcatacaattgcatgaagccacatgtaataataatgataaacatacctgttgcattcaat |
507 |
Q |
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| T |
34141919 |
taatctctggcggccctgcaatcaaaaggttaatgtaagcgcgtacaattgcatgaagccacatgtaataataatgataaacatacctgttgcattcaat |
34142018 |
T |
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| Q |
508 |
ttttcattgcaaatgaacaaattgggagtcatttccattggca |
550 |
Q |
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| T |
34142019 |
ttttcattgcaaatgaacaaattgggagtcatttccattggca |
34142061 |
T |
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