View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3446_high_18 (Length: 230)
Name: NF3446_high_18
Description: NF3446
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3446_high_18 |
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Alignment Details
Target: chr8 (Bit Score: 177; Significance: 1e-95; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 177; E-Value: 1e-95
Query Start/End: Original strand, 1 - 185
Target Start/End: Complemental strand, 8092112 - 8091928
Alignment:
| Q |
1 |
ttatgtgacaatgtgaatgaacatgtattctttgacactcatcatcctacagagaaagctaatcagtattttgccaaattgatatggaatggaaatggca |
100 |
Q |
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| T |
8092112 |
ttatgtgacaatgtgaatgaacatgtattctttgacactcatcatcctacagagaaagctaatcagtattttgccaaattgatatggaatggaaatggca |
8092013 |
T |
|
| Q |
101 |
gtgtcacatggccttacaatctaaaacagctatttgaaatttgagtgttctaccatacaaaacaatgtggattagcttctatgtt |
185 |
Q |
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|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
8092012 |
gtgtcacatggccttacaatctaaaacaactatttgaaatttgagtgttctaccatacaaaacaatgtggattagcttctgtgtt |
8091928 |
T |
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