View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3447-Insertion-11 (Length: 528)
Name: NF3447-Insertion-11
Description: NF3447
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3447-Insertion-11 |
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Alignment Details
Target: chr7 (Bit Score: 443; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 443; E-Value: 0
Query Start/End: Original strand, 16 - 526
Target Start/End: Original strand, 35820955 - 35821466
Alignment:
| Q |
16 |
atcgttttgattattcaatatctagcacgtgaattgataacgaaatttcacagatggaatctcttgagctggatgaaccttcttctacaaggnnnnnnnt |
115 |
Q |
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| T |
35820955 |
atcgttttgattattcaatatctagcacgtgaattgataacgaaatttcacagatggaatctcttgagctggatgaaccttcttctacaaggaaaaaaat |
35821054 |
T |
|
| Q |
116 |
ggtggaaggagagcatatttatggtgtggtgcacggcagaagacaattttcttactaagaaaaatgtatattagggtattctttgcgttaatcatttgat |
215 |
Q |
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| T |
35821055 |
ggtggaaggagagcatatttatggtgtggtgcacggcagaagacaattttcttactaagaaaaatatatattagggtattctttgcgttaatcattcagt |
35821154 |
T |
|
| Q |
216 |
ttttaagggaaacatgtctaataatccaaaattaggcaggaagataaacaaaatccaaccaaaaattaatgtttttagggtattgattaaacaattacaa |
315 |
Q |
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|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
35821155 |
ttttaagggaaacaggtctaataatccaaaattaggcaggaagataaacaaaatccaactaaaaattaatgtttttagggtattgattaaacaattacaa |
35821254 |
T |
|
| Q |
316 |
tgtgtttgttaatttatttgacttattttttcaaccaaactttta-tttaatatttcttaaacaatatccttaaaacaactattatcgtaaacgtgtttt |
414 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| ||||||| |
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| T |
35821255 |
tgtgtttgttaatttatttgacttattttttcaaccaaacttttattttaatatttcttaaacaatatccttaaaacaactgttatcgtaaaagtgtttt |
35821354 |
T |
|
| Q |
415 |
accacacctatgttttttcaagtttattcttaaactagtattcttttcaaattagttaccatataagggtaagccacaattgccaccaacatttatggat |
514 |
Q |
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||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
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| T |
35821355 |
accacacctatgtcttttcaagtttattcttaaactagtattcttttcaaattagttaccatataagggtaagccacaattgccaccaaaatttatggat |
35821454 |
T |
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| Q |
515 |
tttctttatttt |
526 |
Q |
| |
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|||||||||||| |
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| T |
35821455 |
tttctttatttt |
35821466 |
T |
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